Commit Graph

303 Commits

Author SHA1 Message Date
d0c9d97706 Minor optimization for RealNDAlgebra 2021-01-19 22:29:19 +03:00
Iaroslav Postovalov
9748e0bfbe
Merge branch 'dev' into feature/quaternion
# Conflicts:
#	CHANGELOG.md
#	examples/src/main/kotlin/kscience/kmath/stat/DistributionBenchmark.kt
#	kmath-complex/src/commonMain/kotlin/kscience/kmath/complex/ComplexNDField.kt
#	kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Complex.kt
#	kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NDFieldTest.kt
2021-01-20 01:10:31 +07:00
Iaroslav Postovalov
f711fe3d35
Merge branch 'dev' into gsl-experiment
# Conflicts:
#	CHANGELOG.md
2021-01-20 00:34:19 +07:00
ab32cd9561 Numeric operations are decoupled from Ring 2021-01-19 17:16:43 +03:00
4635080317 Optimize RealMatrix dot operation 2021-01-18 21:33:53 +03:00
Iaroslav Postovalov
f5b6847bf6
Merge branch 'dev' into gsl-experiment 2021-01-07 22:46:53 +07:00
44ea32e843 Merge remote-tracking branch 'origin/dev' into dev 2021-01-07 18:07:26 +03:00
b288704528 Optimize RealMatrix dot operation 2021-01-07 18:07:00 +03:00
Iaroslav Postovalov
5d855bd915
Merge branch 'dev' into gsl-experiment 2021-01-06 21:09:07 +07:00
Iaroslav Postovalov
acf9dd2b6a
Extract complex and quaternion systems to another module 2021-01-06 21:01:37 +07:00
Iaroslav Postovalov
2f11660439
Replace Distribution.normal with NormalDistribution 2020-12-12 21:03:28 +07:00
Iaroslav Postovalov
e43aad33fe
Add missing import 2020-12-12 17:13:14 +07:00
Iaroslav Postovalov
5c54640e60
Merge branch 'dev' into mp-samplers
# Conflicts:
#	examples/src/main/kotlin/kscience/kmath/stat/DistributionDemo.kt
#	kmath-stat/src/jvmMain/kotlin/kscience/kmath/stat/distributions.kt
2020-12-12 17:11:09 +07:00
Iaroslav Postovalov
f001389f4c
Merge branch 'dev' into feature/dynamic-ops-currying
# Conflicts:
#	kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt
2020-12-08 15:12:52 +07:00
Iaroslav Postovalov
e62cf4fc65
Rewrite ASM codegen to use curried operators, fix bugs, update benchmarks 2020-12-08 14:42:42 +07:00
Iaroslav Postovalov
0e8f6e29ee
Merge branch 'dev' into gsl-experiment
# Conflicts:
#	kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt
#	kmath-ejml/src/main/kotlin/kscience/kmath/ejml/EjmlMatrixContext.kt
2020-12-02 09:21:25 +07:00
712df04170 Implemented #131 2020-12-01 21:21:56 +03:00
89c0d863d2 Benchmark refactoring 2020-11-29 22:26:05 +03:00
625e624cab kmath-for-real refactoring 2020-11-29 21:38:12 +03:00
Iaroslav Postovalov
0db33cca55
Merge branch 'dev' into gsl-experiment 2020-11-30 00:56:35 +07:00
Iaroslav Postovalov
5a3fccb455
Add reference to Commons Math implementation of InternalErf, fix markdown issues, rename prob package in examples to stat 2020-11-29 22:02:06 +07:00
5b653f10d7 kmath-for-real refactoring 2020-11-29 13:32:20 +03:00
Iaroslav Postovalov
f18cd9ad40
Fix package names 2020-11-29 16:25:08 +07:00
Iaroslav Postovalov
e5d5ac17da
Merge branch 'dev' into gsl-experiment
# Conflicts:
#	build.gradle.kts
#	examples/build.gradle.kts
#	examples/src/main/kotlin/kscience/kmath/ast/ExpressionsInterpretersBenchmark.kt
#	settings.gradle.kts
2020-11-29 01:17:16 +07:00
Iaroslav Postovalov
3c602e859d
Merge branch 'dev' into mp-samplers
# Conflicts:
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt
#	kmath-commons/src/main/kotlin/kscience/kmath/commons/expressions/DiffExpression.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/distributions/NormalDistribution.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalErf.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalGamma.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalUtils.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AhrensDieterExponentialSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AhrensDieterMarsagliaTsangGammaSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AliasMethodDiscreteSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/BoxMullerNormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/GaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/KempSmallMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/LargeMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/MarsagliaNormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/NormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/PoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/SmallMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/ZigguratNormalizedGaussianSampler.kt
#	kmath-stat/src/jvmMain/kotlin/kscience/kmath/stat/distributions.kt
2020-11-02 01:16:29 +07:00
Iaroslav Postovalov
33d23c8d28
Duplicate repositories declared in main build script, fix errors 2020-11-02 01:08:55 +07:00
Iaroslav Postovalov
6b71d8525d
Merge branch 'dev' into kotlingrad
# Conflicts:
#	examples/build.gradle.kts
#	examples/src/main/kotlin/kscience/kmath/ast/ExpressionsInterpretersBenchmark.kt
2020-10-30 19:08:50 +07:00
Iaroslav Postovalov
d14e437659
Update DifferentiableExpression by providing second type argument representing the result of differentiation 2020-10-30 16:57:19 +07:00
Iaroslav Postovalov
ef7066b8c9
Update example 2020-10-30 16:40:58 +07:00
Iaroslav Postovalov
bc4eb95ae7
Add extension functions for DifferentiableMstExpression 2020-10-30 16:40:43 +07:00
Iaroslav Postovalov
29a670483b
Update KG and Maven repos, delete symbol delegate provider, implement working differentiable mst expression based on SFun shape to MST conversion 2020-10-30 01:09:11 +07:00
Iaroslav Postovalov
095b165fa4
Uncomment expressions benchmark, and add factory methods for Nd4jRing and Nd4jField 2020-10-29 23:59:36 +07:00
Iaroslav Postovalov
1e1819ac78
Merge branch 'dev' into gsl-experiment
# Conflicts:
#	build.gradle.kts
#	settings.gradle.kts
2020-10-29 15:47:09 +07:00
Iaroslav Postovalov
7f8abbdd20
Fix typo, introduce KG protocol delegating to algebra 2020-10-29 02:22:34 +07:00
Iaroslav Postovalov
2b7803290f
Merge branch 'dev' into kotlingrad
# Conflicts:
#	settings.gradle.kts
2020-10-28 18:37:21 +07:00
Iaroslav Postovalov
55909aee0d
Add additional constructor 2020-10-28 18:36:00 +07:00
dfa1bcaf01 prob renamed to stat 2020-10-28 09:16:21 +03:00
Iaroslav Postovalov
612f6f0082
Refactor, remove unused files, remove BasicSampler 2020-10-16 16:49:47 +07:00
e44423192d Tools version update 2020-10-13 20:34:17 +03:00
Iaroslav Postovalov
381137724d
Rename KG module 2020-10-13 19:47:07 +07:00
Iaroslav Postovalov
4bf430b2c0
Rename converter functions, add symbol delegate provider for MstAlgebra 2020-10-12 23:17:54 +07:00
Iaroslav Postovalov
54069fd37e
Add example of new AST API 2020-10-12 22:42:34 +07:00
Iaroslav Postovalov
abcde808dc
Add first working test, use kotlinx-io fork, major rework of GSL API 2020-10-04 20:17:44 +07:00
Iaroslav Postovalov
9e277a7de3
Minor changes related to benchmarks and EJML matrix, add GSL module, add wrapper for gsl_matrix, provide headers of gsl, configure cinterop at least for Linux and OSX, update GitHub Actions workflow 2020-10-04 12:45:35 +07:00
Iaroslav Postovalov
26d81bddb5
Merge remote-tracking branch 'origin/dev' into mp-samplers
# Conflicts:
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt
2020-10-02 01:35:55 +07:00
Iaroslav Postovalov
0e6448cd3e
Merge pull request #136 from mipt-npm/ejml
Drop koma module, implement kmath-ejml module copying it, but for EJML SimpleMatrix
2020-10-02 01:30:39 +07:00
Iaroslav Postovalov
254ee9eced
Merge remote-tracking branch 'origin/dev' into even-more-docs 2020-10-01 20:59:34 +07:00
049ac89667 More informative toString for NDBuffer and Complex 2020-09-30 12:30:06 +03:00
Iaroslav Postovalov
c97f81b277
Merge remote-tracking branch 'origin/dev' into even-more-docs
# Conflicts:
#	build.gradle.kts
#	kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Complex.kt
#	kmath-memory/src/commonMain/kotlin/kscience/kmath/memory/Memory.kt
#	kmath-memory/src/commonMain/kotlin/kscience/kmath/memory/MemorySpec.kt
#	kmath-memory/src/commonMain/kotlin/kscience/memory/Memory.kt
#	kmath-memory/src/commonMain/kotlin/kscience/memory/MemorySpec.kt
#	kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt
#	kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt
#	kmath-memory/src/jsMain/kotlin/kscience/kmath/memory/DataViewMemory.kt
#	kmath-memory/src/jsMain/kotlin/kscience/memory/DataViewMemory.kt
#	kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt
#	kmath-memory/src/jvmMain/kotlin/kscience/kmath/memory/ByteBufferMemory.kt
#	kmath-memory/src/jvmMain/kotlin/kscience/memory/ByteBufferMemory.kt
#	kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt
2020-09-28 03:10:24 +07:00
Iaroslav Postovalov
b665a3a2fc
Merge remote-tracking branch 'origin/dev' into mp-samplers 2020-09-28 03:02:48 +07:00
Iaroslav Postovalov
6dcb01ecf1
Merge remote-tracking branch 'origin/dev' into ejml
# Conflicts:
#	CHANGELOG.md
#	doc/features.md
#	examples/build.gradle.kts
2020-09-28 03:00:07 +07:00
53ea704bae Finishing migration to 1.4.20-M1 2020-09-27 19:57:30 +03:00
Iaroslav Postovalov
b83293a057
Update example 2020-09-27 15:52:18 +07:00
Iaroslav Postovalov
e35a364aa8
Merge remote-tracking branch 'origin/dev' into mp-samplers
# Conflicts:
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt
#	kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/Chain.kt
#	kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt
#	kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt
#	kmath-prob/build.gradle.kts
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Distribution.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/AhrensDieterExponentialSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/AhrensDieterMarsagliaTsangGammaSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/AliasMethodDiscreteSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/BoxMullerNormalizedGaussianSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/GaussianSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/InternalGamma.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/InternalUtils.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/KempSmallMeanPoissonSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/LargeMeanPoissonSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/MarsagliaNormalizedGaussianSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/NormalizedGaussianSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/PoissonSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/SmallMeanPoissonSampler.kt
#	kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/samplers/ZigguratNormalizedGaussianSampler.kt
#	kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt
#	kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt
#	kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt
#	kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/distributions.kt
#	kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt
2020-09-27 14:54:20 +07:00
Iaroslav Postovalov
940fabfac2
Add more KDoc comments, fix grammar issue 2020-09-27 14:50:07 +07:00
Iaroslav
12b599fff2
Fix some packaging issues, add some KDoc comments, minor refactor 2020-09-23 21:15:54 +07:00
Iaroslav
86793d6fac
Fix package 2020-09-21 20:56:30 +07:00
Iaroslav
029f534cc2
Merge remote-tracking branch 'origin/dev' into ejml
# Conflicts:
#	CHANGELOG.md
#	README.md
#	examples/build.gradle.kts
#	examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt
#	examples/src/main/kotlin/scientifik/kmath/linear/MultiplicationBenchmark.kt
#	kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt
2020-09-21 18:55:47 +07:00
28190f9800 scientifik -> kscience 2020-09-20 22:39:27 +03:00
5032523bbf Merge remote-tracking branch 'origin/dev' into dev
# Conflicts:
#	build.gradle.kts
#	examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt
#	kmath-ast/build.gradle.kts
#	kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt
#	kmath-commons/build.gradle.kts
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt
#	kmath-for-real/build.gradle.kts
#	kmath-functions/build.gradle.kts
#	kmath-memory/build.gradle.kts
#	kmath-prob/build.gradle.kts
2020-09-20 21:59:10 +03:00
Iaroslav
a4eb54228d
Merge remote-tracking branch 'origin/dev' into ejml 2020-09-20 16:39:23 +07:00
Iaroslav
5eaeb82a0f
Make one-liners not one-liners, add newlines at EOFs, optimize imports and Kotlin extension configurations 2020-09-20 16:36:48 +07:00
9617b79647 Merge remote-tracking branch 'origin/kotlin14' into dev
# Conflicts:
#	build.gradle.kts
#	kmath-core/build.gradle.kts
#	kmath-memory/build.gradle.kts
#	settings.gradle.kts
2020-09-20 10:39:25 +03:00
Iaroslav Postovalov
d55e4a3f84
Merge remote-tracking branch 'origin/dev' into ejml 2020-09-15 17:46:26 +07:00
72340705fe Build refactor 2020-09-12 14:59:12 +03:00
Iaroslav Postovalov
b5fa1ed6e8
Merge remote-tracking branch 'origin/dev' into mp-samplers
# Conflicts:
#	kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt
#	kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt
#	kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt
#	kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt
2020-09-10 23:42:33 +07:00
Iaroslav Postovalov
d1184802bd
Drop koma module, implement kmath-ejml module copying it, but for EJML SimpleMatrix 2020-09-09 23:42:43 +07:00
Iaroslav Postovalov
fc5ec8fed7
Drop koma support, add more explicit visibility modifiers 2020-09-09 22:31:54 +07:00
Iaroslav Postovalov
f567f73d19
Specify explicit API visbility, minor refactoring (error handling, etc.) 2020-09-09 11:28:54 +07:00
Iaroslav Postovalov
6b79e79d21
Update tools and Kotlin, specify public explicitly, minor contracts refactor 2020-09-09 09:55:26 +07:00
Iaroslav
5e4522bb06
Upgrade build tools plugin to dev version; file reformat; change dependencies' versions; specify visibility explicitly at certain places (core, especially), make some interfaces fun 2020-09-08 16:40:47 +07:00
Iaroslav Postovalov
40888f66d6
Replace opt-in annotations with useExperimentalAnnotation for modules 2020-08-22 16:49:21 +07:00
Iaroslav
1d18832aa6
Provide contracts for many functions, make inline several functions, replace <algebra>.run { and with(<algebra>> { with <algebra> {, add newlines at EOFs, specify operator modifier explicitly at many places, reformat files, replace if (...) error guards with require and check 2020-08-22 02:42:59 +07:00
Iaroslav
551d4991fb
Merge remote-tracking branch 'origin/dev' into mp-samplers 2020-06-27 20:47:57 +07:00
Iaroslav
27605aee82
Merge remote-tracking branch 'origin/dev' into adv-expr 2020-06-27 19:56:00 +07:00
4b067f7a97 DoubleBuffer -> RealBuffer. Number algebra refactoring. 2020-06-27 12:19:43 +03:00
Iaroslav
3528fa16db
Add missing dependency in examples 2020-06-25 20:10:38 +07:00
Commander Tvis
002de8d23a
Merge remote-tracking branch 'origin/dev' into adv-expr
# Conflicts:
#	examples/build.gradle.kts
2020-06-25 10:28:32 +07:00
Commander Tvis
c9de04a610
Make benchmarks 'naive' 2020-06-25 10:24:21 +07:00
668d13c9d1 Minor refactoring + domains 2020-06-23 20:03:45 +03:00
Iaroslav
675ace272c
Minor Gradle settings modification, add benchmarks of different Expression implementatinos 2020-06-23 03:38:20 +07:00
96550922cd Removal of AsmExpression 2020-06-15 22:07:31 +03:00
Iaroslav
822f960e9c
Fix broken demos, add newlines at the end of files 2020-06-08 18:19:18 +07:00
8533a31677 Optimized blocking chains for primitive numbers generation. 2020-05-23 10:45:02 +03:00
3f68c0c34e Fix demo for distributions 2020-05-22 21:28:14 +03:00
646207e140 Equlity half-fix for NDStructure 2020-05-06 10:50:08 +03:00
30730f1051 Dimensions for JS 2020-04-27 15:43:03 +03:00
a1dd71a74b update build tools and dependencies 2020-04-03 22:29:23 +03:00
169801060b Examples for type-safe dimensions 2019-12-09 19:57:26 +03:00
4060c70b17 Examples for type-safe dimensions 2019-12-09 19:52:00 +03:00
9936b9e4b7 Viktor prototype with inline 2019-12-09 17:37:17 +03:00
cbac4fca33 Viktor prototype with compiler bug 2019-12-08 17:25:36 +03:00
f9836a6477 Viktor prototype 2019-12-08 15:48:25 +03:00
1e70bebba6 Version update + some useful extensions 2019-11-20 16:12:41 +03:00
e5e9367c43 Factorized distributions/named priors 2019-09-02 13:07:42 +03:00
7f3dd95e72 Moved to scientifik plugin. Removed depricated Vector 2019-07-17 14:21:37 +03:00
88759807ab Added complex example for article 2019-06-26 18:51:01 +03:00
651f8323f3 Basic support for BigInteger (#69) 2019-06-09 22:03:35 +03:00
fe05fc5a14 Added chain mappers 2019-06-09 10:06:48 +03:00
1b647b6014 Random demo 2019-06-08 16:44:49 +03:00
cd1c155e7d Examples fix 2019-06-08 16:30:06 +03:00
f480aa1c5c Example fix 2019-06-08 16:25:51 +03:00
9c2164cd64 Distribution implementations for commons-math 2019-06-08 14:26:44 +03:00