testing autograd

kmath-noa/README.md

@@ -43,3 +43,68 @@ To load the native library you will need to add to the VM options:
 -Djava.library.path=${HOME}/.konan/third-party/noa-v0.0.1/cpp-build/kmath
 ```
 
+## Usage
+
+We implement the tensor algebra interfaces 
+from [kmath-tensors](../kmath-tensors):
+```kotlin
+NoaFloat {
+    val tensor = 
+        randNormal(
+            shape = intArrayOf(7, 5, 3), 
+            device = Device.CPU) // or Device.CUDA(0) for GPU
+    
+    // Compute SVD
+    val (tensorU, tensorS, tensorV) = tensor.svd()
+    
+    // Reconstruct tensor
+    val tensorReg =
+        tensorU dot (diagonalEmbedding(tensorS) dot tensorV.transpose(-2, -1))
+}
+```
+
+The [AutoGrad](https://pytorch.org/tutorials/beginner/blitz/autograd_tutorial.html)
+engine is exposed:
+
+```kotlin
+NoaFloat {
+    // Create a quadratic function
+    val dim = 3
+    val tensorX = randNormal(shape = intArrayOf(dim))
+    val randFeatures = randNormal(shape = intArrayOf(dim, dim))
+    val tensorSigma = randFeatures + randFeatures.transpose(0, 1)
+    val tensorMu = randNormal(shape = intArrayOf(dim))
+
+    // Create a differentiable expression
+    val expressionAtX = withGradAt(tensorX) { x ->
+        0.5f * (x dot (tensorSigma dot x)) + (tensorMu dot x) + 25.9f
+    }
+
+    // Evaluate the gradient at tensorX
+    // retaining the graph for the hessian computation
+    val gradientAtX = expressionAtX.autoGradient(tensorX, retainGraph = true)
+    
+    // Compute the hessian at tensorX
+    val hessianAtX = expressionAtX.autoHessian(tensorX)
+}
+```
+
+
+Native memory management relies on scoping 
+with [NoaScope](src/main/kotlin/space/kscience/kmath/noa/memory/NoaScope.kt)
+which is readily within an algebra context.
+Manual management is also possible:
+```kotlin
+// Create a scope
+val scope = NoaScope()
+
+val tensor = NoaFloat(scope){
+    full(5f, intArrayOf(1))
+}!! // the result might be null
+
+// If the computation fails resources will be freed automatically
+// Otherwise it's your responsibility:
+scope.disposeAll()
+
+// Attempts to use tensor here is undefined behaviour
+```

kmath-noa/build.gradle.kts

@@ -160,8 +160,8 @@ tasks["compileJava"].dependsOn(buildCpp)
 
 tasks {
     withType<Test>{
-        systemProperty("java.library.path", "$home/devspace/noa/cmake-build-release/kmath")
-              //"$cppBuildDir/kmath")
+        systemProperty("java.library.path", //"$home/devspace/noa/cmake-build-release/kmath")
+              "$cppBuildDir/kmath")
     }
 }
 

kmath-noa/src/main/kotlin/space/kscience/kmath/noa/utils.kt

@@ -20,3 +20,14 @@ public fun setNumThreads(numThreads: Int): Unit {
 public fun setSeed(seed: Int): Unit {
     JNoa.setSeed(seed)
 }
+
+public inline fun <T, ArrayT,
+        GradTensorT : NoaTensorOverField<T>,
+        GradAlgebraT : NoaPartialDivisionAlgebra<T, ArrayT, GradTensorT>>
+        GradAlgebraT.withGradAt(
+    tensor: GradTensorT,
+    block: GradAlgebraT.(GradTensorT) -> GradTensorT
+): GradTensorT {
+    tensor.requiresGrad = true
+    return this.block(tensor)
+}

kmath-noa/src/test/kotlin/space/kscience/kmath/noa/TestAlgebra.kt

@@ -81,5 +81,4 @@ class TestAlgebra {
             testingBatchedSymEig(device)
         }
     }!!
-
 }

kmath-noa/src/test/kotlin/space/kscience/kmath/noa/TestAutoGrad.kt

@@ -0,0 +1,69 @@
+/*
+ * Copyright 2018-2021 KMath contributors.
+ * Use of this source code is governed by the Apache 2.0 license that can be found in the license/LICENSE.txt file.
+ */
+
+package space.kscience.kmath.noa
+
+import kotlin.test.Test
+import kotlin.test.assertTrue
+
+internal fun NoaFloat.testingAutoGrad(device: Device = Device.CPU): Unit {
+    setSeed(SEED)
+    val dim = 3
+    val tensorX = randNormal(shape = intArrayOf(dim), device = device)
+    val randFeatures = randNormal(shape = intArrayOf(dim, dim), device = device)
+    val tensorSigma = randFeatures + randFeatures.transpose(0, 1)
+    val tensorMu = randNormal(shape = intArrayOf(dim), device = device)
+
+    val expressionAtX = withGradAt(tensorX) { x ->
+        0.5f * (x dot (tensorSigma dot x)) + (tensorMu dot x) + 25.9f
+    }
+
+    val gradientAtX = expressionAtX.autoGradient(tensorX, retainGraph = true)
+    val hessianAtX = expressionAtX.autoHessian(tensorX)
+    val expectedGradientAtX = (tensorSigma dot tensorX) + tensorMu
+
+    val error = (gradientAtX - expectedGradientAtX).abs().sum() +
+            (hessianAtX - tensorSigma).abs().sum()
+    assertTrue(error < TOLERANCE)
+}
+
+internal fun NoaFloat.testingBatchedAutoGrad(device: Device = Device.CPU): Unit {
+    setSeed(SEED)
+    val batch = intArrayOf(2)
+    val dim = 2
+    val tensorX = randNormal(shape = batch + intArrayOf(1, dim), device = device)
+    val randFeatures = randNormal(shape = batch + intArrayOf(dim, dim), device = device)
+    val tensorSigma = randFeatures + randFeatures.transpose(-2, -1)
+    val tensorMu = randNormal(shape = batch + intArrayOf(1, dim), device = device)
+
+    val expressionAtX = withGradAt(tensorX) { x ->
+        val xt = x.transpose(-1, -2)
+        (0.5f * (x dot (tensorSigma dot xt)) + (tensorMu dot xt) + 58.2f).sumAll()
+    }
+
+
+    val gradientAtX = expressionAtX.autoGradient(tensorX)
+    val expectedGradientAtX = (tensorX dot tensorSigma) + tensorMu
+
+    val error = (gradientAtX - expectedGradientAtX).abs().sum()
+    assertTrue(error < TOLERANCE)
+}
+
+class TestAutoGrad {
+
+    @Test
+    fun testAutoGrad() = NoaFloat {
+        withCuda { device ->
+            testingAutoGrad(device)
+        }
+    }!!
+
+    @Test
+    fun testBatchedAutoGrad() = NoaFloat {
+        withCuda { device ->
+            testingBatchedAutoGrad(device)
+        }
+    }!!
+}

kmath-noa/src/test/kotlin/space/kscience/kmath/noa/TestUtils.kt

@@ -5,6 +5,7 @@
 
 package space.kscience.kmath.noa
 
+import space.kscience.kmath.noa.memory.NoaScope
 import kotlin.test.Test
 import kotlin.test.assertEquals
 
@@ -59,4 +60,16 @@ class TestUtils {
         }
     }!!
 
+    @Test
+    fun testScoping(): Unit {
+        val scope = NoaScope()
+        val tensor = NoaFloat(scope){
+             full(5f, intArrayOf(1))
+        }!!
+        assertEquals(tensor.numElements, 1)
+        assertEquals(scope.disposables.size, 1)
+        scope.disposeAll()
+        assertEquals(scope.disposables.size, 0)
+    }
+
 }