Cleanup and fix ROOT bug

.gitignore

@@ -9,4 +9,3 @@ data/
 !gradle-wrapper.jar
 
 /kotlin-js-store/yarn.lock
-.

build.gradle.kts

@@ -1,3 +1,4 @@
+import org.jetbrains.kotlin.gradle.dsl.KotlinJsCompile
 import space.kscience.gradle.isInDevelopment
 import space.kscience.gradle.useApache2Licence
 import space.kscience.gradle.useSPCTeam
@@ -30,6 +31,12 @@ subprojects {
             freeCompilerArgs = freeCompilerArgs + "-Xcontext-receivers"
         }
     }
+
+    tasks.withType<KotlinJsCompile>{
+        kotlinOptions{
+            useEsClasses = true
+        }
+    }
 }
 
 ksciencePublish {

cern-root-loader/src/commonMain/kotlin/ru/mipt/npm/root/dRootToSolid.kt

@@ -1,10 +1,8 @@
 package ru.mipt.npm.root
 
-import space.kscience.dataforge.meta.double
+import space.kscience.dataforge.meta.*
-import space.kscience.dataforge.meta.doubleArray
-import space.kscience.dataforge.meta.get
-import space.kscience.dataforge.meta.int
 import space.kscience.dataforge.names.Name
+import space.kscience.dataforge.names.parseAsName
 import space.kscience.dataforge.names.plus
 import space.kscience.visionforge.MutableVisionContainer
 import space.kscience.visionforge.isEmpty
@@ -25,6 +23,8 @@ private data class RootToSolidContext(
     val prototypeHolder: PrototypeHolder,
     val currentLayer: Int = 0,
     val maxLayer: Int = 5,
+    val ignoreRootColors: Boolean = false,
+    val colorCache: MutableMap<Meta, String> = mutableMapOf(),
 )
 
 // converting to XYZ to Tait–Bryan angles according to https://en.wikipedia.org/wiki/Euler_angles#Rotation_matrix
@@ -300,7 +300,7 @@ private fun buildVolume(volume: DGeoVolume, context: RootToSolidContext): Solid?
         layer = context.currentLayer
         val nodes = volume.fNodes
 
-        if (nodes.isEmpty() || context.currentLayer >= context.maxLayer) {
+        if (volume.typename != "TGeoVolumeAssembly" && (nodes.isEmpty() || context.currentLayer >= context.maxLayer)) {
             //TODO add smart filter
             volume.fShape?.let { shape ->
                 addShape(shape, context)
@@ -326,6 +326,16 @@ private fun buildVolume(volume: DGeoVolume, context: RootToSolidContext): Solid?
         group.items.values.first().apply { parent = null }
     } else {
         group
+    }.apply {
+        volume.fMedium?.let { medium ->
+            color.set(context.colorCache.getOrPut(medium.meta) { RootColors[11 + context.colorCache.size] })
+        }
+
+        if (!context.ignoreRootColors) {
+            volume.fFillColor?.let {
+                properties[MATERIAL_COLOR_KEY] = RootColors[it]
+            }
+        }
     }
 }
 
@@ -338,6 +348,7 @@ private fun SolidGroup.addRootVolume(
     cache: Boolean = true,
     block: Solid.() -> Unit = {},
 ) {
+
     val combinedName = if (volume.fName.isEmpty()) {
         name
     } else if (name == null) {
@@ -347,12 +358,7 @@ private fun SolidGroup.addRootVolume(
     }
 
     if (!cache) {
-        val group = buildVolume(volume, context)?.apply {
+        val group = buildVolume(volume, context)?.apply(block)
-            volume.fFillColor?.let {
-                properties[MATERIAL_COLOR_KEY] = RootColors[it]
-            }
-            block()
-        }
         setChild(combinedName?.let { Name.parse(it) }, group)
     } else {
         val templateName = volumesName + volume.name
@@ -364,17 +370,17 @@ private fun SolidGroup.addRootVolume(
             }
         }
 
-        ref(templateName, name).apply {
+        ref(templateName, name).apply(block)
-            volume.fFillColor?.let {
-                properties[MATERIAL_COLOR_KEY] = RootColors[it]
-            }
-            block()
-        }
     }
 }
 
-public fun MutableVisionContainer<Solid>.rootGeo(dGeoManager: DGeoManager): SolidGroup = solidGroup {
+public fun MutableVisionContainer<Solid>.rootGeo(
-    val context = RootToSolidContext(this)
+    dGeoManager: DGeoManager,
+    name: String? = null,
+    maxLayer: Int = 5,
+    ignoreRootColors: Boolean = false,
+): SolidGroup = solidGroup(name = name?.parseAsName()) {
+    val context = RootToSolidContext(this, maxLayer = maxLayer, ignoreRootColors = ignoreRootColors)
     dGeoManager.fNodes.forEach { node ->
         addRootNode(node, context)
     }

cern-root-loader/src/commonMain/kotlin/ru/mipt/npm/root/rootColor.kt

@@ -1,7 +1,7 @@
 package ru.mipt.npm.root
 
 public object RootColors {
-    private val colorMap = Array<String>(924) { "white" }
+    private val colorMap = MutableList(924) { "white" }
 
     //colorMap[110] = "white"
 

demo/muon-monitor/src/jvmMain/kotlin/ru/mipt/npm/muon/monitor/MMServer.kt

@@ -23,7 +23,7 @@ import ru.mipt.npm.muon.monitor.sim.Cos2TrackGenerator
 import ru.mipt.npm.muon.monitor.sim.simulateOne
 import space.kscience.dataforge.context.Context
 import space.kscience.dataforge.context.Global
-import space.kscience.dataforge.context.fetch
+import space.kscience.dataforge.context.request
 import space.kscience.dataforge.misc.DFExperimental
 import space.kscience.visionforge.solid.Solids
 import java.awt.Desktop
@@ -36,7 +36,7 @@ private val generator = Cos2TrackGenerator(JDKRandomGenerator(223))
 fun Application.module(context: Context = Global) {
     val currentDir = File(".").absoluteFile
     environment.log.info("Current directory: $currentDir")
-    val solidManager = context.fetch(Solids)
+    val solidManager = context.request(Solids)
 
     install(ContentNegotiation) {
         json()

demo/playground/src/jvmMain/kotlin/rootParser.kt

@@ -7,9 +7,14 @@ import space.kscience.dataforge.meta.Meta
 import space.kscience.dataforge.meta.get
 import space.kscience.dataforge.meta.isLeaf
 import space.kscience.dataforge.meta.string
+import space.kscience.visionforge.Colors
+import space.kscience.visionforge.html.ResourceLocation
 import space.kscience.visionforge.solid.Solids
-import java.nio.file.Paths
+import space.kscience.visionforge.solid.ambientLight
+import space.kscience.visionforge.solid.set
+import space.kscience.visionforge.solid.solid
 import java.util.zip.ZipInputStream
+import kotlin.io.path.Path
 import kotlin.io.path.writeText
 
 
@@ -34,73 +39,17 @@ fun main() {
         println(it)
     }
 
-    val solid = Solids.rootGeo(geo)
+    makeVisionFile(path = Path("data/output.html"), resourceLocation = ResourceLocation.EMBED) {
-
-    Paths.get("BM@N.vf.json").writeText(Solids.encodeToString(solid))
-    //println(Solids.encodeToString(solid))
-
-    makeVisionFile {
         vision("canvas") {
             requirePlugin(Solids)
-            solid
+            solid {
+                ambientLight {
+                    color.set(Colors.white)
+                }
+                rootGeo(geo,"BM@N", maxLayer = 3, ignoreRootColors = true).also {
+                    Path("data/BM@N.vf.json").writeText(Solids.encodeToString(it))
                 }
             }
         }
-
-
-/*            SolidGroup {
-                set(
-                    "Coil",
-                    solid.getPrototype("Coil".asName())!!.apply {
-                        parent = null
     }
-                )
-               *//* group("Shade") {
-                    y = 200
-                    color("red")
-                    coneSurface(
-                        bottomOuterRadius = 135,
-                        bottomInnerRadius = 25,
-                        height = 50,
-                        topOuterRadius = 135,
-                        topInnerRadius = 25,
-                        angle = 1.5707964
-                    ) {
-                        position = Point3D(79.6, 0, -122.1)
-                        rotation = Point3D(-1.5707964, 0, 0)
 }
-                    coneSurface(
-                        bottomOuterRadius = 135,
-                        bottomInnerRadius = 25,
-                        height = 50,
-                        topOuterRadius = 135,
-                        topInnerRadius = 25,
-                        angle = 1.5707964
-                    ) {
-                        position = Point3D(-79.6, 0, -122.1)
-                        rotation = Point3D(1.5707964, 0, -3.1415927)
-                    }
-                    coneSurface(
-                        bottomOuterRadius = 135,
-                        bottomInnerRadius = 25,
-                        height = 50,
-                        topOuterRadius = 135,
-                        topInnerRadius = 25,
-                        angle = 1.5707964
-                    ) {
-                        position = Point3D(79.6, 0, 122.1)
-                        rotation = Point3D(1.5707964, 0, 0)
-                    }
-                    coneSurface(
-                        bottomOuterRadius = 135,
-                        bottomInnerRadius = 25,
-                        height = 50,
-                        topOuterRadius = 135,
-                        topInnerRadius = 25,
-                        angle = 1.5707964
-                    ) {
-                        position = Point3D(-79.6, 0, 122.1)
-                        rotation = Point3D(-1.5707964, 0, -3.1415927)
-                    }
-                }*//*
-            }*/

visionforge-core/build.gradle.kts

@@ -7,10 +7,11 @@ val dataforgeVersion: String by rootProject.extra
 kscience{
     jvm()
     js()
+    native()
     dependencies {
         api("space.kscience:dataforge-context:$dataforgeVersion")
         api(spclibs.kotlinx.html)
-        api("org.jetbrains.kotlin-wrappers:kotlin-css")
+//        api("org.jetbrains.kotlin-wrappers:kotlin-css")
     }
     testDependencies {
         implementation("org.jetbrains.kotlinx:kotlinx-coroutines-test:${space.kscience.gradle.KScienceVersions.coroutinesVersion}")

visionforge-core/src/commonMain/kotlin/space/kscience/visionforge/JvmSynchronized.kt

@@ -0,0 +1,5 @@
+package space.kscience.visionforge
+
+@OptIn(ExperimentalMultiplatform::class)
+@OptionalExpectation
+public expect annotation class JvmSynchronized()

visionforge-core/src/commonMain/kotlin/space/kscience/visionforge/VisionChange.kt

@@ -13,7 +13,6 @@ import space.kscience.dataforge.meta.descriptors.MetaDescriptor
 import space.kscience.dataforge.names.Name
 import space.kscience.dataforge.names.isEmpty
 import space.kscience.dataforge.names.plus
-import kotlin.jvm.Synchronized
 import kotlin.time.Duration
 
 /**
@@ -59,11 +58,11 @@ public class VisionChangeBuilder : MutableVisionContainer<Vision> {
 
     public fun isEmpty(): Boolean = propertyChange.isEmpty() && propertyChange.isEmpty() && children.isEmpty()
 
-    @Synchronized
+    @JvmSynchronized
     private fun getOrPutChild(visionName: Name): VisionChangeBuilder =
         children.getOrPut(visionName) { VisionChangeBuilder() }
 
-    @Synchronized
+    @JvmSynchronized
     internal fun reset() {
         vision = null
         propertyChange = MutableMeta()

visionforge-core/src/commonMain/kotlin/space/kscience/visionforge/VisionContainer.kt

@@ -6,7 +6,6 @@ import kotlinx.coroutines.flow.*
 import kotlinx.coroutines.launch
 import space.kscience.dataforge.names.*
 import space.kscience.visionforge.VisionChildren.Companion.STATIC_TOKEN_BODY
-import kotlin.jvm.Synchronized
 
 @DslMarker
 public annotation class VisionBuilder
@@ -132,7 +131,7 @@ internal abstract class VisionChildrenImpl(
 
     abstract var items: MutableMap<NameToken, Vision>?
 
-    @Synchronized
+    @JvmSynchronized
     private fun buildItems(): MutableMap<NameToken, Vision> {
         if (items == null) {
             items = LinkedHashMap()

visionforge-core/src/commonMain/kotlin/space/kscience/visionforge/VisionProperties.kt

@@ -11,7 +11,6 @@ import space.kscience.dataforge.meta.*
 import space.kscience.dataforge.meta.descriptors.MetaDescriptor
 import space.kscience.dataforge.meta.descriptors.get
 import space.kscience.dataforge.names.*
-import kotlin.jvm.Synchronized
 
 public interface VisionProperties {
 
@@ -155,7 +154,7 @@ public abstract class AbstractVisionProperties(
 
     override val own: Meta? get() = properties
 
-    @Synchronized
+    @JvmSynchronized
     protected fun getOrCreateProperties(): MutableMeta {
         if (properties == null) {
             //TODO check performance issues

visionforge-core/src/jvmMain/kotlin/space/kscience/visionforge/JvmSynchronized.kt

@@ -0,0 +1,3 @@
+package space.kscience.visionforge
+
+public actual typealias JvmSynchronized = Synchronized

visionforge-core/src/jvmMain/kotlin/space/kscience/visionforge/html/htmlExport.kt

@@ -67,9 +67,7 @@ public fun VisionPage.makeFile(
     path: Path?,
     fileHeaders: ((Path) -> Map<String, HtmlFragment>)? = null,
 ): Path {
-    val actualFile = path?.let {
+    val actualFile = path ?: Files.createTempFile("tempPlot", ".html")
-        Path.of(System.getProperty("user.home")).resolve(path)
-    } ?: Files.createTempFile("tempPlot", ".html")
 
     val actualDefaultHeaders = fileHeaders?.invoke(actualFile)
     val actualHeaders = if (actualDefaultHeaders == null) pageHeaders else actualDefaultHeaders + pageHeaders

visionforge-gdml/build.gradle.kts

@@ -12,6 +12,6 @@ kscience {
         api("space.kscience:gdml:0.4.0")
     }
     dependencies(jvmTest) {
-        implementation("ch.qos.logback:logback-classic:1.2.11")
+        implementation(spclibs.logback.classic)
     }
 }

visionforge-markdown/build.gradle.kts

@@ -2,7 +2,7 @@ plugins {
     id("space.kscience.gradle.mpp")
 }
 
-val markdownVersion = "0.2.4"
+val markdownVersion = "0.4.1"
 
 kscience {
     jvm()

visionforge-solid/build.gradle.kts

@@ -5,6 +5,7 @@ plugins {
 kscience {
     jvm()
     js()
+    native()
     useSerialization {
         json()
     }

visionforge-solid/src/commonMain/kotlin/space/kscience/visionforge/solid/SolidGroup.kt

@@ -6,7 +6,10 @@ import space.kscience.dataforge.meta.descriptors.MetaDescriptor
 import space.kscience.dataforge.names.Name
 import space.kscience.dataforge.names.NameToken
 import space.kscience.dataforge.names.parseAsName
-import space.kscience.visionforge.*
+import space.kscience.visionforge.AbstractVisionGroup
+import space.kscience.visionforge.MutableVisionContainer
+import space.kscience.visionforge.MutableVisionGroup
+import space.kscience.visionforge.VisionBuilder
 
 
 /**
@@ -53,7 +56,7 @@ public class SolidGroup : AbstractVisionGroup(), Solid, PrototypeHolder, Mutable
 
     /**
      * Get a prototype redirecting the request to the parent if prototype is not found.
-     * If prototype is a ref, then it is unfolded automatically.
+     * If a prototype is a ref, then it is unfolded automatically.
      */
     override fun getPrototype(name: Name): Solid? =
         prototypes?.get(name)?.prototype ?: (parent as? PrototypeHolder)?.getPrototype(name)

visionforge-solid/src/commonMain/kotlin/space/kscience/visionforge/solid/Solids.kt

@@ -10,7 +10,6 @@ import kotlinx.serialization.serializer
 import space.kscience.dataforge.context.Context
 import space.kscience.dataforge.context.PluginFactory
 import space.kscience.dataforge.context.PluginTag
-import space.kscience.dataforge.context.request
 import space.kscience.dataforge.meta.Meta
 import space.kscience.dataforge.misc.DFExperimental
 import space.kscience.dataforge.names.Name
@@ -27,15 +26,9 @@ public class Solids(meta: Meta) : VisionPlugin(meta), MutableVisionContainer<Sol
         child?.setAsRoot(visionManager)
     }
 
-    public companion object : PluginFactory<Solids>, MutableVisionContainer<Solid> {
+    public companion object : PluginFactory<Solids> {
         override val tag: PluginTag = PluginTag(name = "vision.solid", group = PluginTag.DATAFORGE_GROUP)
 
-        public val default: Solids by lazy {
-            Context("@Solids") {
-                plugin(Solids)
-            }.request(Solids)
-        }
-
         override fun build(context: Context, meta: Meta): Solids = Solids(meta)
 
         private fun PolymorphicModuleBuilder<Solid>.solids() {
@@ -79,9 +72,9 @@ public class Solids(meta: Meta) : VisionPlugin(meta), MutableVisionContainer<Sol
         public fun decodeFromString(str: String): Solid =
             jsonForSolids.decodeFromString(PolymorphicSerializer(Solid::class), str)
 
-        override fun setChild(name: Name?, child: Solid?) {
+//        override fun setChild(name: Name?, child: Solid?) {
-            default.setChild(name, child)
+//            default.setChild(name, child)
-        }
+//        }
     }
 }
 

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/CompositeTest.kt

@@ -8,7 +8,7 @@ class CompositeTest {
     @Test
     fun testCompositeBuilder(){
         lateinit var composite: Composite
-        Solids.solidGroup {
+        testSolids.solidGroup {
             composite = composite(CompositeType.INTERSECT) {
                 y = 300
                 box(100, 100, 100) {

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/ConvexTest.kt

@@ -11,7 +11,7 @@ class ConvexTest {
     @Suppress("UNUSED_VARIABLE")
     @Test
     fun testConvexBuilder() {
-        val group = Solids.solidGroup {
+        val group = testSolids.solidGroup {
             convex {
                 point(50, 50, -50)
                 point(50, -50, -50)

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/GroupTest.kt

@@ -9,7 +9,7 @@ import kotlin.test.assertEquals
 class GroupTest {
     @Test
     fun testGroupWithComposite() {
-        val group = Solids.solidGroup{
+        val group = testSolids.solidGroup{
             union("union") {
                 box(100, 100, 100) {
                     z = 100

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/SerializationTest.kt

@@ -41,7 +41,7 @@ class SerializationTest {
             x = 100
             z = -100
         }
-        val group = Solids.solidGroup {
+        val group = testSolids.solidGroup {
             newRef("cube", cube)
             refGroup("pg", Name.parse("pg.content")) {
                 sphere(50) {
@@ -57,7 +57,7 @@ class SerializationTest {
 
     @Test
     fun lightSerialization(){
-        val group = Solids.solidGroup {
+        val group = testSolids.solidGroup {
             ambientLight {
                 color.set(Colors.white)
                 intensity = 100.0

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/SolidPluginTest.kt

@@ -7,8 +7,10 @@ import space.kscience.visionforge.getChild
 import kotlin.test.Test
 import kotlin.test.assertEquals
 
+internal val testSolids = Global.request(Solids)
+
 class SolidPluginTest {
-    val vision = Solids.solidGroup {
+    val vision = testSolids.solidGroup {
         box(100, 100, 100, name = "aBox")
 
         sphere(100, name = "aSphere") {

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/SolidPropertyTest.kt

@@ -62,7 +62,7 @@ class SolidPropertyTest {
     @Test
     fun testStyleProperty() {
         var box: Box? = null
-        val group = Solids.solidGroup {
+        val group = testSolids.solidGroup {
             styleSheet {
                 update("testStyle") {
                     "test" put 22
@@ -98,7 +98,7 @@ class SolidPropertyTest {
     @Test
     fun testReferenceStyleProperty() {
         var box: SolidReference? = null
-        val group = Solids.solidGroup {
+        val group = testSolids.solidGroup {
             styleSheet {
                 update("testStyle") {
                     SolidMaterial.MATERIAL_COLOR_KEY put "#555555"

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/SolidReferenceTest.kt

@@ -11,7 +11,7 @@ import kotlin.test.assertEquals
 
 @DFExperimental
 class SolidReferenceTest {
-    val groupWithReference = Solids.solidGroup {
+    val groupWithReference = testSolids.solidGroup {
         val theStyle by style {
             SolidMaterial.MATERIAL_COLOR_KEY put "red"
         }

visionforge-solid/src/commonTest/kotlin/space/kscience/visionforge/solid/VisionUpdateTest.kt

@@ -17,7 +17,7 @@ internal class VisionUpdateTest {
 
     @Test
     fun testVisionUpdate() {
-        val targetVision = Solids.solidGroup {
+        val targetVision = testSolids.solidGroup {
             box(200, 200, 200, name = "origin")
         }
         val dif = visionManager.VisionChange {

visionforge-threejs/src/main/kotlin/space/kscience/visionforge/solid/three/csg.kt

@@ -3,8 +3,7 @@
     "OVERRIDING_FINAL_MEMBER",
     "RETURN_TYPE_MISMATCH_ON_OVERRIDE",
     "CONFLICTING_OVERLOADS",
-    "EXTERNAL_DELEGATION",
+    "EXTERNAL_DELEGATION"
-    "NO_EXPLICIT_VISIBILITY_IN_API_MODE_WARNING"
 )
 
 @file:JsModule("three-csg-ts")