Merge pull request #125 from mipt-npm/more-docs

Extended documentation, code refactoring, API consistency changes
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# Algebra and algebra elements # Algebraic Structures and Algebraic Elements
The mathematical operations in `kmath` are generally separated from mathematical objects. The mathematical operations in KMath are generally separated from mathematical objects. This means that to perform an
This means that in order to perform an operation, say `+`, one needs two objects of a type `T` and operation, say `+`, one needs two objects of a type `T` and an algebra context, which draws appropriate operation up,
and algebra context which defines appropriate operation, say `Space<T>`. Next one needs to run actual operation say `Space<T>`. Next one needs to run the actual operation in the context:
in the context:
```kotlin ```kotlin
val a: T import scientifik.kmath.operations.*
val b: T
val space: Space<T>
val c = space.run{a + b} val a: T = ...
val b: T = ...
val space: Space<T> = ...
val c = space { a + b }
``` ```
From the first glance, this distinction seems to be a needless complication, but in fact one needs At first glance, this distinction seems to be a needless complication, but in fact one needs to remember that in
to remember that in mathematics, one could define different operations on the same objects. For example, mathematics, one could draw up different operations on same objects. For example, one could use different types of
one could use different types of geometry for vectors. geometry for vectors.
## Algebra hierarchy ## Algebraic Structures
Mathematical contexts have the following hierarchy: Mathematical contexts have the following hierarchy:
**Space** <- **Ring** <- **Field** **Algebra** ← **Space****Ring** ← **Field**
All classes follow abstract mathematical constructs. These interfaces follow real algebraic structures:
[Space](http://mathworld.wolfram.com/Space.html) defines `zero` element, addition operation and multiplication by constant,
[Ring](http://mathworld.wolfram.com/Ring.html) adds multiplication and unit `one` element,
[Field](http://mathworld.wolfram.com/Field.html) adds division operation.
Typical case of `Field` is the `RealField` which works on doubles. And typical case of `Space` is a `VectorSpace`. - [Space](https://mathworld.wolfram.com/VectorSpace.html) defines addition, its neutral element (i.e. 0) and scalar
multiplication;
- [Ring](http://mathworld.wolfram.com/Ring.html) adds multiplication and its neutral element (i.e. 1);
- [Field](http://mathworld.wolfram.com/Field.html) adds division operation.
In some cases algebra context could hold additional operation like `exp` or `sin`, in this case it inherits appropriate A typical implementation of `Field<T>` is the `RealField` which works on doubles, and `VectorSpace` for `Space<T>`.
interface. Also a context could have an operation which produces an element outside of its context. For example
`Matrix` `dot` operation produces a matrix with new dimensions which can be incompatible with initial matrix in
terms of linear operations.
## Algebra element In some cases algebra context can hold additional operations like `exp` or `sin`, and then it inherits appropriate
interface. Also, contexts may have operations, which produce elements outside of the context. For example, `Matrix.dot`
operation produces a matrix with new dimensions, which can be incompatible with initial matrix in terms of linear
operations.
In order to achieve more familiar behavior (where you apply operations directly to mathematical objects), without involving contexts ## Algebraic Element
`kmath` introduces special type objects called `MathElement`. A `MathElement` is basically some object coupled to
To achieve more familiar behavior (where you apply operations directly to mathematical objects), without involving
contexts KMath submits special type objects called `MathElement`. A `MathElement` is basically some object coupled to
a mathematical context. For example `Complex` is the pair of real numbers representing real and imaginary parts, a mathematical context. For example `Complex` is the pair of real numbers representing real and imaginary parts,
but it also holds reference to the `ComplexField` singleton which allows to perform direct operations on `Complex` but it also holds reference to the `ComplexField` singleton, which allows performing direct operations on `Complex`
numbers without explicit involving the context like: numbers without explicit involving the context like:
```kotlin ```kotlin
val c1 = Complex(1.0, 1.0) import scientifik.kmath.operations.*
val c2 = Complex(1.0, -1.0)
val c3 = c1 + c2 + 3.0.toComplex() // Using elements
//or with field notation: val c1 = Complex(1.0, 1.0)
val c4 = ComplexField.run{c1 + i - 2.0} val c2 = Complex(1.0, -1.0)
val c3 = c1 + c2 + 3.0.toComplex()
// Using context
val c4 = ComplexField { c1 + i - 2.0 }
``` ```
Both notations have their pros and cons. Both notations have their pros and cons.
The hierarchy for algebra elements follows the hierarchy for the corresponding algebra. The hierarchy for algebraic elements follows the hierarchy for the corresponding algebraic structures.
**MathElement** <- **SpaceElement** <- **RingElement** <- **FieldElement** **MathElement** **SpaceElement****RingElement** ← **FieldElement**
**MathElement** is the generic common ancestor of the class with context. `MathElement<C>` is the generic common ancestor of the class with context.
One important distinction between algebra elements and algebra contexts is that algebra element has three type parameters: One major distinction between algebraic elements and algebraic contexts is that elements have three type
parameters:
1. The type of elements, field operates on. 1. The type of elements, the field operates on.
2. The self-type of the element returned from operation (must be algebra element). 2. The self-type of the element returned from operation (which has to be an algebraic element).
3. The type of the algebra over first type-parameter. 3. The type of the algebra over first type-parameter.
The middle type is needed in case algebra members do not store context. For example, it is not possible to add The middle type is needed for of algebra members do not store context. For example, it is impossible to add a context
a context to regular `Double`. The element performs automatic conversions from context types and back. to regular `Double`. The element performs automatic conversions from context types and back. One should use context
One should used context operations in all important places. The performance of element operations is not guaranteed. operations in all performance-critical places. The performance of element operations is not guaranteed.
## Spaces and fields ## Spaces and Fields
An obvious first choice of mathematical objects to implement in a context-oriented style are algebraic elements like spaces, KMath submits both contexts and elements for builtin algebraic structures:
rings and fields. Those are located in the `scientifik.kmath.operations.Algebra.kt` file. Alongside common contexts, the file includes definitions for algebra elements like `FieldElement`. A `FieldElement` object
stores a reference to the `Field` which contains additive and multiplicative operations, meaning
it has one fixed context attached and does not require explicit external context. So those `MathElements` can be operated without context:
```kotlin ```kotlin
import scientifik.kmath.operations.*
val c1 = Complex(1.0, 2.0) val c1 = Complex(1.0, 2.0)
val c2 = ComplexField.i val c2 = ComplexField.i
val c3 = c1 + c2 val c3 = c1 + c2
// or
val c3 = ComplexField { c1 + c2 }
``` ```
`ComplexField` also features special operations to mix complex and real numbers, for example: Also, `ComplexField` features special operations to mix complex and real numbers, for example:
```kotlin ```kotlin
import scientifik.kmath.operations.*
val c1 = Complex(1.0, 2.0) val c1 = Complex(1.0, 2.0)
val c2 = ComplexField.run{ c1 - 1.0} // Returns: [re:0.0, im: 2.0] val c2 = ComplexField { c1 - 1.0 } // Returns: Complex(re=0.0, im=2.0)
val c3 = ComplexField.run{ c1 - i*2.0} val c3 = ComplexField { c1 - i * 2.0 }
``` ```
**Note**: In theory it is possible to add behaviors directly to the context, but currently kotlin syntax does not support **Note**: In theory it is possible to add behaviors directly to the context, but as for now Kotlin does not support
that. Watch [KT-10468](https://youtrack.jetbrains.com/issue/KT-10468) and [KEEP-176](https://github.com/Kotlin/KEEP/pull/176) for updates. that. Watch [KT-10468](https://youtrack.jetbrains.com/issue/KT-10468) and
[KEEP-176](https://github.com/Kotlin/KEEP/pull/176) for updates.
## Nested fields ## Nested fields
Contexts allow one to build more complex structures. For example, it is possible to create a `Matrix` from complex elements like so: Contexts allow one to build more complex structures. For example, it is possible to create a `Matrix` from complex
elements like so:
```kotlin ```kotlin
val element = NDElement.complex(shape = intArrayOf(2,2)){ index: IntArray -> val element = NDElement.complex(shape = intArrayOf(2, 2)) { index: IntArray ->
Complex(index[0].toDouble() - index[1].toDouble(), index[0].toDouble() + index[1].toDouble()) Complex(index[0].toDouble() - index[1].toDouble(), index[0].toDouble() + index[1].toDouble())
} }
``` ```
The `element` in this example is a member of the `Field` of 2-d structures, each element of which is a member of its own The `element` in this example is a member of the `Field` of 2D structures, each element of which is a member of its own
`ComplexField`. The important thing is one does not need to create a special n-d class to hold complex `ComplexField`. It is important one does not need to create a special n-d class to hold complex
numbers and implement operations on it, one just needs to provide a field for its elements. numbers and implement operations on it, one just needs to provide a field for its elements.
**Note**: Fields themselves do not solve the problem of JVM boxing, but it is possible to solve with special contexts like **Note**: Fields themselves do not solve the problem of JVM boxing, but it is possible to solve with special contexts like

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# Buffers # Buffers
Buffer is one of main building blocks of kmath. It is a basic interface allowing random-access read and write (with `MutableBuffer`). Buffer is one of main building blocks of kmath. It is a basic interface allowing random-access read and write (with `MutableBuffer`).
There are different types of buffers: There are different types of buffers:
@ -12,4 +13,5 @@ Some kmath features require a `BufferFactory` class to operate properly. A gener
buffer for given reified type (for types with custom memory buffer it still better to use their own `MemoryBuffer.create()` factory). buffer for given reified type (for types with custom memory buffer it still better to use their own `MemoryBuffer.create()` factory).
## Buffer performance ## Buffer performance
One should avoid using default boxing buffer wherever it is possible. Try to use primitive buffers or memory buffers instead One should avoid using default boxing buffer wherever it is possible. Try to use primitive buffers or memory buffers instead

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# Local coding conventions # Coding Conventions
Kmath and other `scientifik` projects use general [kotlin code conventions](https://kotlinlang.org/docs/reference/coding-conventions.html), but with a number of small changes and clarifications. KMath code follows general [Kotlin conventions](https://kotlinlang.org/docs/reference/coding-conventions.html), but
with a number of small changes and clarifications.
## Utility class names ## Utility Class Naming
File name should coincide with a name of one of the classes contained in the file or start with small letter and describe its contents.
The code convention [here](https://kotlinlang.org/docs/reference/coding-conventions.html#source-file-names) says that file names should start with capital letter even if file does not contain classes. Yet starting utility classes and aggregators with a small letter seems to be a good way to clearly visually separate those files. Filename should coincide with a name of one of the classes contained in the file or start with small letter and
describe its contents.
The code convention [here](https://kotlinlang.org/docs/reference/coding-conventions.html#source-file-names) says that
file names should start with a capital letter even if file does not contain classes. Yet starting utility classes and
aggregators with a small letter seems to be a good way to visually separate those files.
This convention could be changed in future in a non-breaking way. This convention could be changed in future in a non-breaking way.
## Private variable names ## Private Variable Naming
Private variable names could start with underscore `_` in case the private mutable variable is shadowed by the public read-only value with the same meaning.
Code convention do not permit underscores in names, but is is sometimes useful to "underscore" the fact that public and private versions define the same entity. It is allowed only for private variables. Private variables' names may start with underscore `_` for of the private mutable variable is shadowed by the public
read-only value with the same meaning.
This rule does not permit underscores in names, but it is sometimes useful to "underscore" the fact that public and
private versions draw up the same entity. It is allowed only for private variables.
This convention could be changed in future in a non-breaking way. This convention could be changed in future in a non-breaking way.
## Functions and properties one-liners ## Functions and Properties One-liners
Use one-liners when they occupy single code window line both for functions and properties with getters like `val b: String get() = "fff"`. The same should be done with multiline expressions when they could be cleanly separated.
There is not general consensus whenever use `fun a() = {}` or `fun a(){return}`. Yet from reader perspective one-lines seem to better show that the property or function is easily calculated. Use one-liners when they occupy single code window line both for functions and properties with getters like
`val b: String get() = "fff"`. The same should be performed with multiline expressions when they could be
cleanly separated.
There is no universal consensus whenever use `fun a() = ...` or `fun a() { return ... }`. Yet from reader outlook
one-lines seem to better show that the property or function is easily calculated.

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## Basic linear algebra layout ## Basic linear algebra layout
Kmath support for linear algebra organized in a context-oriented way. Meaning that operations are in most cases declared KMath support for linear algebra organized in a context-oriented way. Meaning that operations are in most cases declared
in context classes, and are not the members of classes that store data. This allows more flexible approach to maintain multiple in context classes, and are not the members of classes that store data. This allows more flexible approach to maintain multiple
back-ends. The new operations added as extensions to contexts instead of being member functions of data structures. back-ends. The new operations added as extensions to contexts instead of being member functions of data structures.

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# Nd-structure generation and operations # ND-structure generation and operations
**TODO** **TODO**

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# Abstract syntax tree expression representation and operations (`kmath-ast`) # Abstract Syntax Tree Expression Representation and Operations (`kmath-ast`)
This subproject implements the following features: This subproject implements the following features:
@ -38,7 +38,7 @@ This subproject implements the following features:
> ``` > ```
> >
## Dynamic expression code generation with ObjectWeb ASM ## Dynamic Expression Code Generation with ObjectWeb ASM
`kmath-ast` JVM module supports runtime code generation to eliminate overhead of tree traversal. Code generator builds `kmath-ast` JVM module supports runtime code generation to eliminate overhead of tree traversal. Code generator builds
a special implementation of `Expression<T>` with implemented `invoke` function. a special implementation of `Expression<T>` with implemented `invoke` function.
@ -46,7 +46,7 @@ a special implementation of `Expression<T>` with implemented `invoke` function.
For example, the following builder: For example, the following builder:
```kotlin ```kotlin
RealField.mstInField { symbol("x") + 2 }.compile() RealField.mstInField { symbol("x") + 2 }.compile()
``` ```
… leads to generation of bytecode, which can be decompiled to the following Java class: … leads to generation of bytecode, which can be decompiled to the following Java class:
@ -75,7 +75,7 @@ public final class AsmCompiledExpression_1073786867_0 implements Expression<Doub
### Example Usage ### Example Usage
This API is an extension to MST and MstExpression, so you may optimize as both of them: This API extends MST and MstExpression, so you may optimize as both of them:
```kotlin ```kotlin
RealField.mstInField { symbol("x") + 2 }.compile() RealField.mstInField { symbol("x") + 2 }.compile()

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@ -5,42 +5,54 @@ import scientifik.kmath.operations.NumericAlgebra
import scientifik.kmath.operations.RealField import scientifik.kmath.operations.RealField
/** /**
* A Mathematical Syntax Tree node for mathematical expressions * A Mathematical Syntax Tree node for mathematical expressions.
*/ */
sealed class MST { sealed class MST {
/** /**
* A node containing unparsed string * A node containing raw string.
*
* @property value the value of this node.
*/ */
data class Symbolic(val value: String) : MST() data class Symbolic(val value: String) : MST()
/** /**
* A node containing a number * A node containing a numeric value or scalar.
*
* @property value the value of this number.
*/ */
data class Numeric(val value: Number) : MST() data class Numeric(val value: Number) : MST()
/** /**
* A node containing an unary operation * A node containing an unary operation.
*
* @property operation the identifier of operation.
* @property value the argument of this operation.
*/ */
data class Unary(val operation: String, val value: MST) : MST() { data class Unary(val operation: String, val value: MST) : MST() {
companion object { companion object
const val ABS_OPERATION = "abs"
//TODO add operations
}
} }
/** /**
* A node containing binary operation * A node containing binary operation.
*
* @property operation the identifier operation.
* @property left the left operand.
* @property right the right operand.
*/ */
data class Binary(val operation: String, val left: MST, val right: MST) : MST() { data class Binary(val operation: String, val left: MST, val right: MST) : MST() {
companion object companion object
} }
} }
//TODO add a function with positional arguments // TODO add a function with named arguments
//TODO add a function with named arguments
/**
* Interprets the [MST] node with this [Algebra].
*
* @receiver the algebra that provides operations.
* @param node the node to evaluate.
* @return the value of expression.
*/
fun <T> Algebra<T>.evaluate(node: MST): T = when (node) { fun <T> Algebra<T>.evaluate(node: MST): T = when (node) {
is MST.Numeric -> (this as? NumericAlgebra<T>)?.number(node.value) is MST.Numeric -> (this as? NumericAlgebra<T>)?.number(node.value)
?: error("Numeric nodes are not supported by $this") ?: error("Numeric nodes are not supported by $this")
@ -65,4 +77,11 @@ fun <T> Algebra<T>.evaluate(node: MST): T = when (node) {
} }
} }
fun <T> MST.compile(algebra: Algebra<T>): T = algebra.evaluate(this) /**
* Interprets the [MST] node with this [Algebra].
*
* @receiver the node to evaluate.
* @param algebra the algebra that provides operations.
* @return the value of expression.
*/
fun <T> MST.interpret(algebra: Algebra<T>): T = algebra.evaluate(this)

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@ -2,6 +2,9 @@ package scientifik.kmath.ast
import scientifik.kmath.operations.* import scientifik.kmath.operations.*
/**
* [Algebra] over [MST] nodes.
*/
object MstAlgebra : NumericAlgebra<MST> { object MstAlgebra : NumericAlgebra<MST> {
override fun number(value: Number): MST = MST.Numeric(value) override fun number(value: Number): MST = MST.Numeric(value)
@ -14,17 +17,16 @@ object MstAlgebra : NumericAlgebra<MST> {
MST.Binary(operation, left, right) MST.Binary(operation, left, right)
} }
/**
* [Space] over [MST] nodes.
*/
object MstSpace : Space<MST>, NumericAlgebra<MST> { object MstSpace : Space<MST>, NumericAlgebra<MST> {
override val zero: MST = number(0.0) override val zero: MST = number(0.0)
override fun number(value: Number): MST = MstAlgebra.number(value) override fun number(value: Number): MST = MstAlgebra.number(value)
override fun symbol(value: String): MST = MstAlgebra.symbol(value) override fun symbol(value: String): MST = MstAlgebra.symbol(value)
override fun add(a: MST, b: MST): MST = binaryOperation(SpaceOperations.PLUS_OPERATION, a, b)
override fun add(a: MST, b: MST): MST = override fun multiply(a: MST, k: Number): MST = binaryOperation(RingOperations.TIMES_OPERATION, a, number(k))
binaryOperation(SpaceOperations.PLUS_OPERATION, a, b)
override fun multiply(a: MST, k: Number): MST =
binaryOperation(RingOperations.TIMES_OPERATION, a, number(k))
override fun binaryOperation(operation: String, left: MST, right: MST): MST = override fun binaryOperation(operation: String, left: MST, right: MST): MST =
MstAlgebra.binaryOperation(operation, left, right) MstAlgebra.binaryOperation(operation, left, right)
@ -32,41 +34,69 @@ object MstSpace : Space<MST>, NumericAlgebra<MST> {
override fun unaryOperation(operation: String, arg: MST): MST = MstAlgebra.unaryOperation(operation, arg) override fun unaryOperation(operation: String, arg: MST): MST = MstAlgebra.unaryOperation(operation, arg)
} }
/**
* [Ring] over [MST] nodes.
*/
object MstRing : Ring<MST>, NumericAlgebra<MST> { object MstRing : Ring<MST>, NumericAlgebra<MST> {
override val zero: MST = number(0.0) override val zero: MST = number(0.0)
override val one: MST = number(1.0) override val one: MST = number(1.0)
override fun number(value: Number): MST = MstAlgebra.number(value) override fun number(value: Number): MST = MstSpace.number(value)
override fun symbol(value: String): MST = MstAlgebra.symbol(value) override fun symbol(value: String): MST = MstSpace.symbol(value)
override fun add(a: MST, b: MST): MST = binaryOperation(SpaceOperations.PLUS_OPERATION, a, b) override fun add(a: MST, b: MST): MST = MstSpace.add(a, b)
override fun multiply(a: MST, k: Number): MST = override fun multiply(a: MST, k: Number): MST = MstSpace.multiply(a, k)
binaryOperation(RingOperations.TIMES_OPERATION, a, MstSpace.number(k))
override fun multiply(a: MST, b: MST): MST = binaryOperation(RingOperations.TIMES_OPERATION, a, b) override fun multiply(a: MST, b: MST): MST = binaryOperation(RingOperations.TIMES_OPERATION, a, b)
override fun binaryOperation(operation: String, left: MST, right: MST): MST = override fun binaryOperation(operation: String, left: MST, right: MST): MST =
MstAlgebra.binaryOperation(operation, left, right) MstSpace.binaryOperation(operation, left, right)
override fun unaryOperation(operation: String, arg: MST): MST = MstAlgebra.unaryOperation(operation, arg) override fun unaryOperation(operation: String, arg: MST): MST = MstAlgebra.unaryOperation(operation, arg)
} }
/**
* [Field] over [MST] nodes.
*/
object MstField : Field<MST> { object MstField : Field<MST> {
override val zero: MST = number(0.0) override val zero: MST = number(0.0)
override val one: MST = number(1.0) override val one: MST = number(1.0)
override fun symbol(value: String): MST = MstAlgebra.symbol(value) override fun symbol(value: String): MST = MstRing.symbol(value)
override fun number(value: Number): MST = MstAlgebra.number(value) override fun number(value: Number): MST = MstRing.number(value)
override fun add(a: MST, b: MST): MST = binaryOperation(SpaceOperations.PLUS_OPERATION, a, b) override fun add(a: MST, b: MST): MST = MstRing.add(a, b)
override fun multiply(a: MST, k: Number): MST = MstRing.multiply(a, k)
override fun multiply(a: MST, k: Number): MST = override fun multiply(a: MST, b: MST): MST = MstRing.multiply(a, b)
binaryOperation(RingOperations.TIMES_OPERATION, a, MstSpace.number(k))
override fun multiply(a: MST, b: MST): MST = binaryOperation(RingOperations.TIMES_OPERATION, a, b)
override fun divide(a: MST, b: MST): MST = binaryOperation(FieldOperations.DIV_OPERATION, a, b) override fun divide(a: MST, b: MST): MST = binaryOperation(FieldOperations.DIV_OPERATION, a, b)
override fun binaryOperation(operation: String, left: MST, right: MST): MST = override fun binaryOperation(operation: String, left: MST, right: MST): MST =
MstAlgebra.binaryOperation(operation, left, right) MstRing.binaryOperation(operation, left, right)
override fun unaryOperation(operation: String, arg: MST): MST = MstAlgebra.unaryOperation(operation, arg) override fun unaryOperation(operation: String, arg: MST): MST = MstRing.unaryOperation(operation, arg)
}
/**
* [ExtendedField] over [MST] nodes.
*/
object MstExtendedField : ExtendedField<MST> {
override val zero: MST = number(0.0)
override val one: MST = number(1.0)
override fun sin(arg: MST): MST = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg)
override fun cos(arg: MST): MST = unaryOperation(TrigonometricOperations.COS_OPERATION, arg)
override fun asin(arg: MST): MST = unaryOperation(InverseTrigonometricOperations.ASIN_OPERATION, arg)
override fun acos(arg: MST): MST = unaryOperation(InverseTrigonometricOperations.ACOS_OPERATION, arg)
override fun atan(arg: MST): MST = unaryOperation(InverseTrigonometricOperations.ATAN_OPERATION, arg)
override fun add(a: MST, b: MST): MST = MstField.add(a, b)
override fun multiply(a: MST, k: Number): MST = MstField.multiply(a, k)
override fun multiply(a: MST, b: MST): MST = MstField.multiply(a, b)
override fun divide(a: MST, b: MST): MST = MstField.divide(a, b)
override fun power(arg: MST, pow: Number): MST = binaryOperation(PowerOperations.POW_OPERATION, arg, number(pow))
override fun exp(arg: MST): MST = unaryOperation(ExponentialOperations.EXP_OPERATION, arg)
override fun ln(arg: MST): MST = unaryOperation(ExponentialOperations.LN_OPERATION, arg)
override fun binaryOperation(operation: String, left: MST, right: MST): MST =
MstField.binaryOperation(operation, left, right)
override fun unaryOperation(operation: String, arg: MST): MST = MstField.unaryOperation(operation, arg)
} }

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@ -1,19 +1,16 @@
package scientifik.kmath.ast package scientifik.kmath.ast
import scientifik.kmath.expressions.Expression import scientifik.kmath.expressions.*
import scientifik.kmath.expressions.FunctionalExpressionField
import scientifik.kmath.expressions.FunctionalExpressionRing
import scientifik.kmath.expressions.FunctionalExpressionSpace
import scientifik.kmath.operations.* import scientifik.kmath.operations.*
/** /**
* The expression evaluates MST on-flight. Should be much faster than functional expression, but slower than ASM-generated expressions. * The expression evaluates MST on-flight. Should be much faster than functional expression, but slower than
* ASM-generated expressions.
*
* @property algebra the algebra that provides operations.
* @property mst the [MST] node.
*/ */
class MstExpression<T>(val algebra: Algebra<T>, val mst: MST) : Expression<T> { class MstExpression<T>(val algebra: Algebra<T>, val mst: MST) : Expression<T> {
/**
* Substitute algebra raw value
*/
private inner class InnerAlgebra(val arguments: Map<String, T>) : NumericAlgebra<T> { private inner class InnerAlgebra(val arguments: Map<String, T>) : NumericAlgebra<T> {
override fun symbol(value: String): T = arguments[value] ?: algebra.symbol(value) override fun symbol(value: String): T = arguments[value] ?: algebra.symbol(value)
override fun unaryOperation(operation: String, arg: T): T = algebra.unaryOperation(operation, arg) override fun unaryOperation(operation: String, arg: T): T = algebra.unaryOperation(operation, arg)
@ -30,26 +27,62 @@ class MstExpression<T>(val algebra: Algebra<T>, val mst: MST) : Expression<T> {
override fun invoke(arguments: Map<String, T>): T = InnerAlgebra(arguments).evaluate(mst) override fun invoke(arguments: Map<String, T>): T = InnerAlgebra(arguments).evaluate(mst)
} }
/**
* Builds [MstExpression] over [Algebra].
*/
inline fun <reified T : Any, A : Algebra<T>, E : Algebra<MST>> A.mst( inline fun <reified T : Any, A : Algebra<T>, E : Algebra<MST>> A.mst(
mstAlgebra: E, mstAlgebra: E,
block: E.() -> MST block: E.() -> MST
): MstExpression<T> = MstExpression(this, mstAlgebra.block()) ): MstExpression<T> = MstExpression(this, mstAlgebra.block())
/**
* Builds [MstExpression] over [Space].
*/
inline fun <reified T : Any> Space<T>.mstInSpace(block: MstSpace.() -> MST): MstExpression<T> = inline fun <reified T : Any> Space<T>.mstInSpace(block: MstSpace.() -> MST): MstExpression<T> =
MstExpression(this, MstSpace.block()) MstExpression(this, MstSpace.block())
/**
* Builds [MstExpression] over [Ring].
*/
inline fun <reified T : Any> Ring<T>.mstInRing(block: MstRing.() -> MST): MstExpression<T> = inline fun <reified T : Any> Ring<T>.mstInRing(block: MstRing.() -> MST): MstExpression<T> =
MstExpression(this, MstRing.block()) MstExpression(this, MstRing.block())
/**
* Builds [MstExpression] over [Field].
*/
inline fun <reified T : Any> Field<T>.mstInField(block: MstField.() -> MST): MstExpression<T> = inline fun <reified T : Any> Field<T>.mstInField(block: MstField.() -> MST): MstExpression<T> =
MstExpression(this, MstField.block()) MstExpression(this, MstField.block())
inline fun <reified T : Any, A : Space<T>> FunctionalExpressionSpace<T, A>.mstInSpace(block: MstSpace.() -> MST): MstExpression<T> = /**
algebra.mstInSpace(block) * Builds [MstExpression] over [ExtendedField].
*/
inline fun <reified T : Any> Field<T>.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression<T> =
MstExpression(this, MstExtendedField.block())
inline fun <reified T : Any, A : Ring<T>> FunctionalExpressionRing<T, A>.mstInRing(block: MstRing.() -> MST): MstExpression<T> = /**
algebra.mstInRing(block) * Builds [MstExpression] over [FunctionalExpressionSpace].
*/
inline fun <reified T : Any, A : Space<T>> FunctionalExpressionSpace<T, A>.mstInSpace(
block: MstSpace.() -> MST
): MstExpression<T> = algebra.mstInSpace(block)
inline fun <reified T : Any, A : Field<T>> FunctionalExpressionField<T, A>.mstInField(block: MstField.() -> MST): MstExpression<T> = /**
algebra.mstInField(block) * Builds [MstExpression] over [FunctionalExpressionRing].
*/
inline fun <reified T : Any, A : Ring<T>> FunctionalExpressionRing<T, A>.mstInRing(
block: MstRing.() -> MST
): MstExpression<T> = algebra.mstInRing(block)
/**
* Builds [MstExpression] over [FunctionalExpressionField].
*/
inline fun <reified T : Any, A : Field<T>> FunctionalExpressionField<T, A>.mstInField(
block: MstField.() -> MST
): MstExpression<T> = algebra.mstInField(block)
/**
* Builds [MstExpression] over [FunctionalExpressionExtendedField].
*/
inline fun <reified T : Any, A : ExtendedField<T>> FunctionalExpressionExtendedField<T, A>.mstInExtendedField(
block: MstExtendedField.() -> MST
): MstExpression<T> = algebra.mstInExtendedField(block)

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@ -80,5 +80,18 @@ object ArithmeticsEvaluator : Grammar<MST>() {
override val rootParser: Parser<MST> by subSumChain override val rootParser: Parser<MST> by subSumChain
} }
/**
* Tries to parse the string into [MST].
*
* @receiver the string to parse.
* @return the [MST] node.
*/
fun String.tryParseMath(): ParseResult<MST> = ArithmeticsEvaluator.tryParseToEnd(this) fun String.tryParseMath(): ParseResult<MST> = ArithmeticsEvaluator.tryParseToEnd(this)
/**
* Parses the string into [MST].
*
* @receiver the string to parse.
* @return the [MST] node.
*/
fun String.parseMath(): MST = ArithmeticsEvaluator.parseToEnd(this) fun String.parseMath(): MST = ArithmeticsEvaluator.parseToEnd(this)

40
kmath-core/README.md Normal file
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@ -0,0 +1,40 @@
# The Core Module (`kmath-ast`)
The core features of KMath:
- Algebraic structures: contexts and elements.
- ND structures.
- Buffers.
- Functional Expressions.
- Domains.
- Automatic differentiation.
> #### Artifact:
> This module is distributed in the artifact `scientifik:kmath-core:0.1.4-dev-8`.
>
> **Gradle:**
>
> ```gradle
> repositories {
> maven { url 'https://dl.bintray.com/mipt-npm/scientifik' }
> maven { url 'https://dl.bintray.com/mipt-npm/dev' }
> maven { url https://dl.bintray.com/hotkeytlt/maven' }
> }
>
> dependencies {
> implementation 'scientifik:kmath-core:0.1.4-dev-8'
> }
> ```
> **Gradle Kotlin DSL:**
>
> ```kotlin
> repositories {
> maven("https://dl.bintray.com/mipt-npm/scientifik")
> maven("https://dl.bintray.com/mipt-npm/dev")
> maven("https://dl.bintray.com/hotkeytlt/maven")
> }
>
> dependencies {``
> implementation("scientifik:kmath-core:0.1.4-dev-8")
> }
> ```

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@ -1,11 +1,7 @@
plugins { plugins { id("scientifik.mpp") }
id("scientifik.mpp")
}
kotlin.sourceSets { kotlin.sourceSets {
commonMain { commonMain {
dependencies { dependencies { api(project(":kmath-memory")) }
api(project(":kmath-memory"))
}
} }
} }

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@ -3,13 +3,18 @@ package scientifik.kmath.domains
import scientifik.kmath.linear.Point import scientifik.kmath.linear.Point
/** /**
* A simple geometric domain * A simple geometric domain.
*
* @param T the type of element of this domain.
*/ */
interface Domain<T : Any> { interface Domain<T : Any> {
/**
* Checks if the specified point is contained in this domain.
*/
operator fun contains(point: Point<T>): Boolean operator fun contains(point: Point<T>): Boolean
/** /**
* Number of hyperspace dimensions * Number of hyperspace dimensions.
*/ */
val dimension: Int val dimension: Int
} }

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@ -42,13 +42,14 @@ class HyperSquareDomain(private val lower: RealBuffer, private val upper: RealBu
override fun getUpperBound(num: Int): Double? = upper[num] override fun getUpperBound(num: Int): Double? = upper[num]
override fun nearestInDomain(point: Point<Double>): Point<Double> { override fun nearestInDomain(point: Point<Double>): Point<Double> {
val res: DoubleArray = DoubleArray(point.size) { i -> val res = DoubleArray(point.size) { i ->
when { when {
point[i] < lower[i] -> lower[i] point[i] < lower[i] -> lower[i]
point[i] > upper[i] -> upper[i] point[i] > upper[i] -> upper[i]
else -> point[i] else -> point[i]
} }
} }
return RealBuffer(*res) return RealBuffer(*res)
} }

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@ -22,8 +22,7 @@ import scientifik.kmath.linear.Point
* *
* @author Alexander Nozik * @author Alexander Nozik
*/ */
interface RealDomain: Domain<Double> { interface RealDomain : Domain<Double> {
fun nearestInDomain(point: Point<Double>): Point<Double> fun nearestInDomain(point: Point<Double>): Point<Double>
/** /**
@ -61,5 +60,4 @@ interface RealDomain: Domain<Double> {
* @return * @return
*/ */
fun volume(): Double fun volume(): Double
} }

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@ -18,7 +18,6 @@ package scientifik.kmath.domains
import scientifik.kmath.linear.Point import scientifik.kmath.linear.Point
class UnconstrainedDomain(override val dimension: Int) : RealDomain { class UnconstrainedDomain(override val dimension: Int) : RealDomain {
override operator fun contains(point: Point<Double>): Boolean = true override operator fun contains(point: Point<Double>): Boolean = true
override fun getLowerBound(num: Int, point: Point<Double>): Double? = Double.NEGATIVE_INFINITY override fun getLowerBound(num: Int, point: Point<Double>): Double? = Double.NEGATIVE_INFINITY
@ -32,5 +31,4 @@ class UnconstrainedDomain(override val dimension: Int) : RealDomain {
override fun nearestInDomain(point: Point<Double>): Point<Double> = point override fun nearestInDomain(point: Point<Double>): Point<Double> = point
override fun volume(): Double = Double.POSITIVE_INFINITY override fun volume(): Double = Double.POSITIVE_INFINITY
} }

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@ -4,7 +4,6 @@ import scientifik.kmath.linear.Point
import scientifik.kmath.structures.asBuffer import scientifik.kmath.structures.asBuffer
inline class UnivariateDomain(val range: ClosedFloatingPointRange<Double>) : RealDomain { inline class UnivariateDomain(val range: ClosedFloatingPointRange<Double>) : RealDomain {
operator fun contains(d: Double): Boolean = range.contains(d) operator fun contains(d: Double): Boolean = range.contains(d)
override operator fun contains(point: Point<Double>): Boolean { override operator fun contains(point: Point<Double>): Boolean {
@ -15,7 +14,7 @@ inline class UnivariateDomain(val range: ClosedFloatingPointRange<Double>) : Rea
override fun nearestInDomain(point: Point<Double>): Point<Double> { override fun nearestInDomain(point: Point<Double>): Point<Double> {
require(point.size == 1) require(point.size == 1)
val value = point[0] val value = point[0]
return when{ return when {
value in range -> point value in range -> point
value >= range.endInclusive -> doubleArrayOf(range.endInclusive).asBuffer() value >= range.endInclusive -> doubleArrayOf(range.endInclusive).asBuffer()
else -> doubleArrayOf(range.start).asBuffer() else -> doubleArrayOf(range.start).asBuffer()

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@ -1,23 +1,31 @@
package scientifik.kmath.expressions package scientifik.kmath.expressions
import scientifik.kmath.operations.ExtendedField
import scientifik.kmath.operations.Field import scientifik.kmath.operations.Field
import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Ring
import scientifik.kmath.operations.Space import scientifik.kmath.operations.Space
/** /**
* Create a functional expression on this [Space] * Creates a functional expression with this [Space].
*/ */
fun <T> Space<T>.spaceExpression(block: FunctionalExpressionSpace<T, Space<T>>.() -> Expression<T>): Expression<T> = fun <T> Space<T>.spaceExpression(block: FunctionalExpressionSpace<T, Space<T>>.() -> Expression<T>): Expression<T> =
FunctionalExpressionSpace(this).run(block) FunctionalExpressionSpace(this).run(block)
/** /**
* Create a functional expression on this [Ring] * Creates a functional expression with this [Ring].
*/ */
fun <T> Ring<T>.ringExpression(block: FunctionalExpressionRing<T, Ring<T>>.() -> Expression<T>): Expression<T> = fun <T> Ring<T>.ringExpression(block: FunctionalExpressionRing<T, Ring<T>>.() -> Expression<T>): Expression<T> =
FunctionalExpressionRing(this).run(block) FunctionalExpressionRing(this).run(block)
/** /**
* Create a functional expression on this [Field] * Creates a functional expression with this [Field].
*/ */
fun <T> Field<T>.fieldExpression(block: FunctionalExpressionField<T, Field<T>>.() -> Expression<T>): Expression<T> = fun <T> Field<T>.fieldExpression(block: FunctionalExpressionField<T, Field<T>>.() -> Expression<T>): Expression<T> =
FunctionalExpressionField(this).run(block) FunctionalExpressionField(this).run(block)
/**
* Creates a functional expression with this [ExtendedField].
*/
fun <T> ExtendedField<T>.fieldExpression(
block: FunctionalExpressionExtendedField<T, ExtendedField<T>>.() -> Expression<T>
): Expression<T> = FunctionalExpressionExtendedField(this).run(block)

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@ -6,6 +6,12 @@ import scientifik.kmath.operations.Algebra
* An elementary function that could be invoked on a map of arguments * An elementary function that could be invoked on a map of arguments
*/ */
interface Expression<T> { interface Expression<T> {
/**
* Calls this expression from arguments.
*
* @param arguments the map of arguments.
* @return the value.
*/
operator fun invoke(arguments: Map<String, T>): T operator fun invoke(arguments: Map<String, T>): T
companion object companion object
@ -14,10 +20,17 @@ interface Expression<T> {
/** /**
* Create simple lazily evaluated expression inside given algebra * Create simple lazily evaluated expression inside given algebra
*/ */
fun <T> Algebra<T>.expression(block: Algebra<T>.(arguments: Map<String, T>) -> T): Expression<T> = object: Expression<T> { fun <T> Algebra<T>.expression(block: Algebra<T>.(arguments: Map<String, T>) -> T): Expression<T> =
object : Expression<T> {
override fun invoke(arguments: Map<String, T>): T = block(arguments) override fun invoke(arguments: Map<String, T>): T = block(arguments)
} }
/**
* Calls this expression from arguments.
*
* @param pairs the pair of arguments' names to values.
* @return the value.
*/
operator fun <T> Expression<T>.invoke(vararg pairs: Pair<String, T>): T = invoke(mapOf(*pairs)) operator fun <T> Expression<T>.invoke(vararg pairs: Pair<String, T>): T = invoke(mapOf(*pairs))
/** /**

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@ -40,7 +40,6 @@ internal class FunctionalConstProductExpression<T>(
* @param algebra The algebra to provide for Expressions built. * @param algebra The algebra to provide for Expressions built.
*/ */
abstract class FunctionalExpressionAlgebra<T, A : Algebra<T>>(val algebra: A) : ExpressionAlgebra<T, Expression<T>> { abstract class FunctionalExpressionAlgebra<T, A : Algebra<T>>(val algebra: A) : ExpressionAlgebra<T, Expression<T>> {
/** /**
* Builds an Expression of constant expression which does not depend on arguments. * Builds an Expression of constant expression which does not depend on arguments.
*/ */
@ -69,14 +68,13 @@ abstract class FunctionalExpressionAlgebra<T, A : Algebra<T>>(val algebra: A) :
*/ */
open class FunctionalExpressionSpace<T, A : Space<T>>(algebra: A) : open class FunctionalExpressionSpace<T, A : Space<T>>(algebra: A) :
FunctionalExpressionAlgebra<T, A>(algebra), Space<Expression<T>> { FunctionalExpressionAlgebra<T, A>(algebra), Space<Expression<T>> {
override val zero: Expression<T> get() = const(algebra.zero) override val zero: Expression<T> get() = const(algebra.zero)
/** /**
* Builds an Expression of addition of two another expressions. * Builds an Expression of addition of two another expressions.
*/ */
override fun add(a: Expression<T>, b: Expression<T>): Expression<T> = override fun add(a: Expression<T>, b: Expression<T>): Expression<T> =
FunctionalBinaryOperation(algebra, SpaceOperations.PLUS_OPERATION, a, b) binaryOperation(SpaceOperations.PLUS_OPERATION, a, b)
/** /**
* Builds an Expression of multiplication of expression by number. * Builds an Expression of multiplication of expression by number.
@ -105,7 +103,7 @@ open class FunctionalExpressionRing<T, A>(algebra: A) : FunctionalExpressionSpac
* Builds an Expression of multiplication of two expressions. * Builds an Expression of multiplication of two expressions.
*/ */
override fun multiply(a: Expression<T>, b: Expression<T>): Expression<T> = override fun multiply(a: Expression<T>, b: Expression<T>): Expression<T> =
FunctionalBinaryOperation(algebra, RingOperations.TIMES_OPERATION, a, b) binaryOperation(RingOperations.TIMES_OPERATION, a, b)
operator fun Expression<T>.times(arg: T): Expression<T> = this * const(arg) operator fun Expression<T>.times(arg: T): Expression<T> = this * const(arg)
operator fun T.times(arg: Expression<T>): Expression<T> = arg * this operator fun T.times(arg: Expression<T>): Expression<T> = arg * this
@ -124,7 +122,7 @@ open class FunctionalExpressionField<T, A>(algebra: A) :
* Builds an Expression of division an expression by another one. * Builds an Expression of division an expression by another one.
*/ */
override fun divide(a: Expression<T>, b: Expression<T>): Expression<T> = override fun divide(a: Expression<T>, b: Expression<T>): Expression<T> =
FunctionalBinaryOperation(algebra, FieldOperations.DIV_OPERATION, a, b) binaryOperation(FieldOperations.DIV_OPERATION, a, b)
operator fun Expression<T>.div(arg: T): Expression<T> = this / const(arg) operator fun Expression<T>.div(arg: T): Expression<T> = this / const(arg)
operator fun T.div(arg: Expression<T>): Expression<T> = arg / this operator fun T.div(arg: Expression<T>): Expression<T> = arg / this
@ -136,6 +134,34 @@ open class FunctionalExpressionField<T, A>(algebra: A) :
super<FunctionalExpressionRing>.binaryOperation(operation, left, right) super<FunctionalExpressionRing>.binaryOperation(operation, left, right)
} }
open class FunctionalExpressionExtendedField<T, A>(algebra: A) :
FunctionalExpressionField<T, A>(algebra),
ExtendedField<Expression<T>> where A : ExtendedField<T>, A : NumericAlgebra<T> {
override fun sin(arg: Expression<T>): Expression<T> = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg)
override fun cos(arg: Expression<T>): Expression<T> = unaryOperation(TrigonometricOperations.COS_OPERATION, arg)
override fun asin(arg: Expression<T>): Expression<T> =
unaryOperation(InverseTrigonometricOperations.ASIN_OPERATION, arg)
override fun acos(arg: Expression<T>): Expression<T> =
unaryOperation(InverseTrigonometricOperations.ACOS_OPERATION, arg)
override fun atan(arg: Expression<T>): Expression<T> =
unaryOperation(InverseTrigonometricOperations.ATAN_OPERATION, arg)
override fun power(arg: Expression<T>, pow: Number): Expression<T> =
binaryOperation(PowerOperations.POW_OPERATION, arg, number(pow))
override fun exp(arg: Expression<T>): Expression<T> = unaryOperation(ExponentialOperations.EXP_OPERATION, arg)
override fun ln(arg: Expression<T>): Expression<T> = unaryOperation(ExponentialOperations.LN_OPERATION, arg)
override fun unaryOperation(operation: String, arg: Expression<T>): Expression<T> =
super<FunctionalExpressionField>.unaryOperation(operation, arg)
override fun binaryOperation(operation: String, left: Expression<T>, right: Expression<T>): Expression<T> =
super<FunctionalExpressionField>.binaryOperation(operation, left, right)
}
inline fun <T, A : Space<T>> A.expressionInSpace(block: FunctionalExpressionSpace<T, A>.() -> Expression<T>): Expression<T> = inline fun <T, A : Space<T>> A.expressionInSpace(block: FunctionalExpressionSpace<T, A>.() -> Expression<T>): Expression<T> =
FunctionalExpressionSpace(this).block() FunctionalExpressionSpace(this).block()
@ -144,3 +170,6 @@ inline fun <T, A : Ring<T>> A.expressionInRing(block: FunctionalExpressionRing<T
inline fun <T, A : Field<T>> A.expressionInField(block: FunctionalExpressionField<T, A>.() -> Expression<T>): Expression<T> = inline fun <T, A : Field<T>> A.expressionInField(block: FunctionalExpressionField<T, A>.() -> Expression<T>): Expression<T> =
FunctionalExpressionField(this).block() FunctionalExpressionField(this).block()
inline fun <T, A : ExtendedField<T>> A.expressionInExtendedField(block: FunctionalExpressionExtendedField<T, A>.() -> Expression<T>): Expression<T> =
FunctionalExpressionExtendedField(this).block()

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@ -19,22 +19,20 @@ class BufferMatrixContext<T : Any, R : Ring<T>>(
override fun point(size: Int, initializer: (Int) -> T): Point<T> = bufferFactory(size, initializer) override fun point(size: Int, initializer: (Int) -> T): Point<T> = bufferFactory(size, initializer)
companion object { companion object
}
} }
@Suppress("OVERRIDE_BY_INLINE") @Suppress("OVERRIDE_BY_INLINE")
object RealMatrixContext : GenericMatrixContext<Double, RealField> { object RealMatrixContext : GenericMatrixContext<Double, RealField> {
override val elementContext get() = RealField override val elementContext: RealField get() = RealField
override inline fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> Double): Matrix<Double> { override inline fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> Double): Matrix<Double> {
val buffer = RealBuffer(rows * columns) { offset -> initializer(offset / columns, offset % columns) } val buffer = RealBuffer(rows * columns) { offset -> initializer(offset / columns, offset % columns) }
return BufferMatrix(rows, columns, buffer) return BufferMatrix(rows, columns, buffer)
} }
override inline fun point(size: Int, initializer: (Int) -> Double): Point<Double> = RealBuffer(size,initializer) override inline fun point(size: Int, initializer: (Int) -> Double): Point<Double> = RealBuffer(size, initializer)
} }
class BufferMatrix<T : Any>( class BufferMatrix<T : Any>(
@ -52,7 +50,7 @@ class BufferMatrix<T : Any>(
override val shape: IntArray get() = intArrayOf(rowNum, colNum) override val shape: IntArray get() = intArrayOf(rowNum, colNum)
override fun suggestFeature(vararg features: MatrixFeature) = override fun suggestFeature(vararg features: MatrixFeature): BufferMatrix<T> =
BufferMatrix(rowNum, colNum, buffer, this.features + features) BufferMatrix(rowNum, colNum, buffer, this.features + features)
override fun get(index: IntArray): T = get(index[0], index[1]) override fun get(index: IntArray): T = get(index[0], index[1])
@ -84,8 +82,8 @@ class BufferMatrix<T : Any>(
override fun toString(): String { override fun toString(): String {
return if (rowNum <= 5 && colNum <= 5) { return if (rowNum <= 5 && colNum <= 5) {
"Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)\n" + "Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)\n" +
rows.asSequence().joinToString(prefix = "(", postfix = ")", separator = "\n ") { rows.asSequence().joinToString(prefix = "(", postfix = ")", separator = "\n ") { buffer ->
it.asSequence().joinToString(separator = "\t") { it.toString() } buffer.asSequence().joinToString(separator = "\t") { it.toString() }
} }
} else { } else {
"Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)" "Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)"

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@ -23,12 +23,10 @@ interface FeaturedMatrix<T : Any> : Matrix<T> {
*/ */
fun suggestFeature(vararg features: MatrixFeature): FeaturedMatrix<T> fun suggestFeature(vararg features: MatrixFeature): FeaturedMatrix<T>
companion object { companion object
}
} }
fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double) = fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double): Matrix<Double> =
MatrixContext.real.produce(rows, columns, initializer) MatrixContext.real.produce(rows, columns, initializer)
/** /**
@ -41,7 +39,7 @@ fun <T : Any> Structure2D.Companion.square(vararg elements: T): FeaturedMatrix<T
return BufferMatrix(size, size, buffer) return BufferMatrix(size, size, buffer)
} }
val Matrix<*>.features get() = (this as? FeaturedMatrix)?.features?: emptySet() val Matrix<*>.features: Set<MatrixFeature> get() = (this as? FeaturedMatrix)?.features ?: emptySet()
/** /**
* Check if matrix has the given feature class * Check if matrix has the given feature class
@ -68,7 +66,7 @@ fun <T : Any, R : Ring<T>> GenericMatrixContext<T, R>.one(rows: Int, columns: In
* A virtual matrix of zeroes * A virtual matrix of zeroes
*/ */
fun <T : Any, R : Ring<T>> GenericMatrixContext<T, R>.zero(rows: Int, columns: Int): FeaturedMatrix<T> = fun <T : Any, R : Ring<T>> GenericMatrixContext<T, R>.zero(rows: Int, columns: Int): FeaturedMatrix<T> =
VirtualMatrix<T>(rows, columns) { _, _ -> elementContext.zero } VirtualMatrix(rows, columns) { _, _ -> elementContext.zero }
class TransposedFeature<T : Any>(val original: Matrix<T>) : MatrixFeature class TransposedFeature<T : Any>(val original: Matrix<T>) : MatrixFeature

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@ -18,7 +18,7 @@ class LUPDecomposition<T : Any>(
private val even: Boolean private val even: Boolean
) : LUPDecompositionFeature<T>, DeterminantFeature<T> { ) : LUPDecompositionFeature<T>, DeterminantFeature<T> {
val elementContext get() = context.elementContext val elementContext: Field<T> get() = context.elementContext
/** /**
* Returns the matrix L of the decomposition. * Returns the matrix L of the decomposition.
@ -67,7 +67,7 @@ class LUPDecomposition<T : Any>(
} }
fun <T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.abs(value: T) = fun <T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.abs(value: T): T =
if (value > elementContext.zero) value else with(elementContext) { -value } if (value > elementContext.zero) value else with(elementContext) { -value }
@ -169,9 +169,10 @@ fun <T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.lup(
inline fun <reified T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.lup( inline fun <reified T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.lup(
matrix: Matrix<T>, matrix: Matrix<T>,
noinline checkSingular: (T) -> Boolean noinline checkSingular: (T) -> Boolean
) = lup(T::class, matrix, checkSingular) ): LUPDecomposition<T> = lup(T::class, matrix, checkSingular)
fun GenericMatrixContext<Double, RealField>.lup(matrix: Matrix<Double>) = lup(Double::class, matrix) { it < 1e-11 } fun GenericMatrixContext<Double, RealField>.lup(matrix: Matrix<Double>): LUPDecomposition<Double> =
lup(Double::class, matrix) { it < 1e-11 }
fun <T : Any> LUPDecomposition<T>.solve(type: KClass<T>, matrix: Matrix<T>): Matrix<T> { fun <T : Any> LUPDecomposition<T>.solve(type: KClass<T>, matrix: Matrix<T>): Matrix<T> {
@ -185,7 +186,7 @@ fun <T : Any> LUPDecomposition<T>.solve(type: KClass<T>, matrix: Matrix<T>): Mat
// Apply permutations to b // Apply permutations to b
val bp = create { _, _ -> zero } val bp = create { _, _ -> zero }
for (row in 0 until pivot.size) { for (row in pivot.indices) {
val bpRow = bp.row(row) val bpRow = bp.row(row)
val pRow = pivot[row] val pRow = pivot[row]
for (col in 0 until matrix.colNum) { for (col in 0 until matrix.colNum) {
@ -194,7 +195,7 @@ fun <T : Any> LUPDecomposition<T>.solve(type: KClass<T>, matrix: Matrix<T>): Mat
} }
// Solve LY = b // Solve LY = b
for (col in 0 until pivot.size) { for (col in pivot.indices) {
val bpCol = bp.row(col) val bpCol = bp.row(col)
for (i in col + 1 until pivot.size) { for (i in col + 1 until pivot.size) {
val bpI = bp.row(i) val bpI = bp.row(i)
@ -225,7 +226,7 @@ fun <T : Any> LUPDecomposition<T>.solve(type: KClass<T>, matrix: Matrix<T>): Mat
} }
} }
inline fun <reified T : Any> LUPDecomposition<T>.solve(matrix: Matrix<T>) = solve(T::class, matrix) inline fun <reified T : Any> LUPDecomposition<T>.solve(matrix: Matrix<T>): Matrix<T> = solve(T::class, matrix)
/** /**
* Solve a linear equation **a*x = b** * Solve a linear equation **a*x = b**
@ -240,13 +241,12 @@ inline fun <reified T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.
return decomposition.solve(T::class, b) return decomposition.solve(T::class, b)
} }
fun RealMatrixContext.solve(a: Matrix<Double>, b: Matrix<Double>) = fun RealMatrixContext.solve(a: Matrix<Double>, b: Matrix<Double>): Matrix<Double> = solve(a, b) { it < 1e-11 }
solve(a, b) { it < 1e-11 }
inline fun <reified T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.inverse( inline fun <reified T : Comparable<T>, F : Field<T>> GenericMatrixContext<T, F>.inverse(
matrix: Matrix<T>, matrix: Matrix<T>,
noinline checkSingular: (T) -> Boolean noinline checkSingular: (T) -> Boolean
) = solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular) ): Matrix<T> = solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular)
fun RealMatrixContext.inverse(matrix: Matrix<Double>) = fun RealMatrixContext.inverse(matrix: Matrix<Double>): Matrix<Double> =
solve(matrix, one(matrix.rowNum, matrix.colNum)) { it < 1e-11 } solve(matrix, one(matrix.rowNum, matrix.colNum)) { it < 1e-11 }

View File

@ -25,4 +25,4 @@ fun <T : Any> Matrix<T>.asPoint(): Point<T> =
error("Can't convert matrix with more than one column to vector") error("Can't convert matrix with more than one column to vector")
} }
fun <T : Any> Point<T>.asMatrix() = VirtualMatrix(size, 1) { i, _ -> get(i) } fun <T : Any> Point<T>.asMatrix(): VirtualMatrix<T> = VirtualMatrix(size, 1) { i, _ -> get(i) }

View File

@ -29,7 +29,7 @@ interface MatrixContext<T : Any> : SpaceOperations<Matrix<T>> {
/** /**
* Non-boxing double matrix * Non-boxing double matrix
*/ */
val real = RealMatrixContext val real: RealMatrixContext = RealMatrixContext
/** /**
* A structured matrix with custom buffer * A structured matrix with custom buffer
@ -82,12 +82,12 @@ interface GenericMatrixContext<T : Any, R : Ring<T>> : MatrixContext<T> {
} }
} }
override operator fun Matrix<T>.unaryMinus() = override operator fun Matrix<T>.unaryMinus(): Matrix<T> =
produce(rowNum, colNum) { i, j -> elementContext.run { -get(i, j) } } produce(rowNum, colNum) { i, j -> elementContext.run { -get(i, j) } }
override fun add(a: Matrix<T>, b: Matrix<T>): Matrix<T> { override fun add(a: Matrix<T>, b: Matrix<T>): Matrix<T> {
if (a.rowNum != b.rowNum || a.colNum != b.colNum) error("Matrix operation dimension mismatch. [${a.rowNum},${a.colNum}] + [${b.rowNum},${b.colNum}]") if (a.rowNum != b.rowNum || a.colNum != b.colNum) error("Matrix operation dimension mismatch. [${a.rowNum},${a.colNum}] + [${b.rowNum},${b.colNum}]")
return produce(a.rowNum, a.colNum) { i, j -> elementContext.run { a.get(i, j) + b[i, j] } } return produce(a.rowNum, a.colNum) { i, j -> elementContext.run { a[i, j] + b[i, j] } }
} }
override operator fun Matrix<T>.minus(b: Matrix<T>): Matrix<T> { override operator fun Matrix<T>.minus(b: Matrix<T>): Matrix<T> {
@ -96,7 +96,7 @@ interface GenericMatrixContext<T : Any, R : Ring<T>> : MatrixContext<T> {
} }
override fun multiply(a: Matrix<T>, k: Number): Matrix<T> = override fun multiply(a: Matrix<T>, k: Number): Matrix<T> =
produce(a.rowNum, a.colNum) { i, j -> elementContext.run { a.get(i, j) * k } } produce(a.rowNum, a.colNum) { i, j -> elementContext.run { a[i, j] * k } }
operator fun Number.times(matrix: FeaturedMatrix<T>): Matrix<T> = matrix * this operator fun Number.times(matrix: FeaturedMatrix<T>): Matrix<T> = matrix * this

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@ -1,7 +1,7 @@
package scientifik.kmath.linear package scientifik.kmath.linear
/** /**
* A marker interface representing some matrix feature like diagonal, sparce, zero, etc. Features used to optimize matrix * A marker interface representing some matrix feature like diagonal, sparse, zero, etc. Features used to optimize matrix
* operations performance in some cases. * operations performance in some cases.
*/ */
interface MatrixFeature interface MatrixFeature
@ -36,19 +36,19 @@ interface DeterminantFeature<T : Any> : MatrixFeature {
} }
@Suppress("FunctionName") @Suppress("FunctionName")
fun <T: Any> DeterminantFeature(determinant: T) = object: DeterminantFeature<T>{ fun <T : Any> DeterminantFeature(determinant: T): DeterminantFeature<T> = object : DeterminantFeature<T> {
override val determinant: T = determinant override val determinant: T = determinant
} }
/** /**
* Lower triangular matrix * Lower triangular matrix
*/ */
object LFeature: MatrixFeature object LFeature : MatrixFeature
/** /**
* Upper triangular feature * Upper triangular feature
*/ */
object UFeature: MatrixFeature object UFeature : MatrixFeature
/** /**
* TODO add documentation * TODO add documentation

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@ -54,7 +54,7 @@ interface VectorSpace<T : Any, S : Space<T>> : Space<Point<T>> {
size: Int, size: Int,
space: S, space: S,
bufferFactory: BufferFactory<T> = Buffer.Companion::boxing bufferFactory: BufferFactory<T> = Buffer.Companion::boxing
) = BufferVectorSpace(size, space, bufferFactory) ): BufferVectorSpace<T, S> = BufferVectorSpace(size, space, bufferFactory)
/** /**
* Automatic buffered vector, unboxed if it is possible * Automatic buffered vector, unboxed if it is possible
@ -70,6 +70,6 @@ class BufferVectorSpace<T : Any, S : Space<T>>(
override val space: S, override val space: S,
val bufferFactory: BufferFactory<T> val bufferFactory: BufferFactory<T>
) : VectorSpace<T, S> { ) : VectorSpace<T, S> {
override fun produce(initializer: (Int) -> T) = bufferFactory(size, initializer) override fun produce(initializer: (Int) -> T): Buffer<T> = bufferFactory(size, initializer)
//override fun produceElement(initializer: (Int) -> T): Vector<T, S> = BufferVector(this, produce(initializer)) //override fun produceElement(initializer: (Int) -> T): Vector<T, S> = BufferVector(this, produce(initializer))
} }

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@ -20,7 +20,7 @@ class VirtualMatrix<T : Any>(
override fun get(i: Int, j: Int): T = generator(i, j) override fun get(i: Int, j: Int): T = generator(i, j)
override fun suggestFeature(vararg features: MatrixFeature) = override fun suggestFeature(vararg features: MatrixFeature): VirtualMatrix<T> =
VirtualMatrix(rowNum, colNum, this.features + features, generator) VirtualMatrix(rowNum, colNum, this.features + features, generator)
override fun equals(other: Any?): Boolean { override fun equals(other: Any?): Boolean {

View File

@ -22,12 +22,12 @@ class DerivationResult<T : Any>(
val deriv: Map<Variable<T>, T>, val deriv: Map<Variable<T>, T>,
val context: Field<T> val context: Field<T>
) : Variable<T>(value) { ) : Variable<T>(value) {
fun deriv(variable: Variable<T>) = deriv[variable] ?: context.zero fun deriv(variable: Variable<T>): T = deriv[variable] ?: context.zero
/** /**
* compute divergence * compute divergence
*/ */
fun div() = context.run { sum(deriv.values) } fun div(): T = context.run { sum(deriv.values) }
/** /**
* Compute a gradient for variables in given order * Compute a gradient for variables in given order
@ -53,7 +53,7 @@ class DerivationResult<T : Any>(
* ``` * ```
*/ */
fun <T : Any, F : Field<T>> F.deriv(body: AutoDiffField<T, F>.() -> Variable<T>): DerivationResult<T> = fun <T : Any, F : Field<T>> F.deriv(body: AutoDiffField<T, F>.() -> Variable<T>): DerivationResult<T> =
AutoDiffContext<T, F>(this).run { AutoDiffContext(this).run {
val result = body() val result = body()
result.d = context.one// computing derivative w.r.t result result.d = context.one// computing derivative w.r.t result
runBackwardPass() runBackwardPass()
@ -86,7 +86,7 @@ abstract class AutoDiffField<T : Any, F : Field<T>> : Field<Variable<T>> {
abstract fun variable(value: T): Variable<T> abstract fun variable(value: T): Variable<T>
inline fun variable(block: F.() -> T) = variable(context.block()) inline fun variable(block: F.() -> T): Variable<T> = variable(context.block())
// Overloads for Double constants // Overloads for Double constants

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@ -1,14 +1,15 @@
package scientifik.kmath.misc package scientifik.kmath.misc
import scientifik.kmath.operations.Space import scientifik.kmath.operations.Space
import scientifik.kmath.operations.invoke
import kotlin.jvm.JvmName import kotlin.jvm.JvmName
/** /**
* Generic cumulative operation on iterator * Generic cumulative operation on iterator.
* @param T type of initial iterable *
* @param R type of resulting iterable * @param T the type of initial iterable.
* @param initial lazy evaluated * @param R the type of resulting iterable.
* @param initial lazy evaluated.
*/ */
fun <T, R> Iterator<T>.cumulative(initial: R, operation: (R, T) -> R): Iterator<R> = object : Iterator<R> { fun <T, R> Iterator<T>.cumulative(initial: R, operation: (R, T) -> R): Iterator<R> = object : Iterator<R> {
var state: R = initial var state: R = initial
@ -36,41 +37,41 @@ fun <T, R> List<T>.cumulative(initial: R, operation: (R, T) -> R): List<R> =
/** /**
* Cumulative sum with custom space * Cumulative sum with custom space
*/ */
fun <T> Iterable<T>.cumulativeSum(space: Space<T>) = with(space) { fun <T> Iterable<T>.cumulativeSum(space: Space<T>): Iterable<T> = space {
cumulative(zero) { element: T, sum: T -> sum + element } cumulative(zero) { element: T, sum: T -> sum + element }
} }
@JvmName("cumulativeSumOfDouble") @JvmName("cumulativeSumOfDouble")
fun Iterable<Double>.cumulativeSum() = this.cumulative(0.0) { element, sum -> sum + element } fun Iterable<Double>.cumulativeSum(): Iterable<Double> = this.cumulative(0.0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfInt") @JvmName("cumulativeSumOfInt")
fun Iterable<Int>.cumulativeSum() = this.cumulative(0) { element, sum -> sum + element } fun Iterable<Int>.cumulativeSum(): Iterable<Int> = this.cumulative(0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfLong") @JvmName("cumulativeSumOfLong")
fun Iterable<Long>.cumulativeSum() = this.cumulative(0L) { element, sum -> sum + element } fun Iterable<Long>.cumulativeSum(): Iterable<Long> = this.cumulative(0L) { element, sum -> sum + element }
fun <T> Sequence<T>.cumulativeSum(space: Space<T>) = with(space) { fun <T> Sequence<T>.cumulativeSum(space: Space<T>): Sequence<T> = with(space) {
cumulative(zero) { element: T, sum: T -> sum + element } cumulative(zero) { element: T, sum: T -> sum + element }
} }
@JvmName("cumulativeSumOfDouble") @JvmName("cumulativeSumOfDouble")
fun Sequence<Double>.cumulativeSum() = this.cumulative(0.0) { element, sum -> sum + element } fun Sequence<Double>.cumulativeSum(): Sequence<Double> = this.cumulative(0.0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfInt") @JvmName("cumulativeSumOfInt")
fun Sequence<Int>.cumulativeSum() = this.cumulative(0) { element, sum -> sum + element } fun Sequence<Int>.cumulativeSum(): Sequence<Int> = this.cumulative(0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfLong") @JvmName("cumulativeSumOfLong")
fun Sequence<Long>.cumulativeSum() = this.cumulative(0L) { element, sum -> sum + element } fun Sequence<Long>.cumulativeSum(): Sequence<Long> = this.cumulative(0L) { element, sum -> sum + element }
fun <T> List<T>.cumulativeSum(space: Space<T>) = with(space) { fun <T> List<T>.cumulativeSum(space: Space<T>): List<T> = with(space) {
cumulative(zero) { element: T, sum: T -> sum + element } cumulative(zero) { element: T, sum: T -> sum + element }
} }
@JvmName("cumulativeSumOfDouble") @JvmName("cumulativeSumOfDouble")
fun List<Double>.cumulativeSum() = this.cumulative(0.0) { element, sum -> sum + element } fun List<Double>.cumulativeSum(): List<Double> = this.cumulative(0.0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfInt") @JvmName("cumulativeSumOfInt")
fun List<Int>.cumulativeSum() = this.cumulative(0) { element, sum -> sum + element } fun List<Int>.cumulativeSum(): List<Int> = this.cumulative(0) { element, sum -> sum + element }
@JvmName("cumulativeSumOfLong") @JvmName("cumulativeSumOfLong")
fun List<Long>.cumulativeSum() = this.cumulative(0L) { element, sum -> sum + element } fun List<Long>.cumulativeSum(): List<Long> = this.cumulative(0L) { element, sum -> sum + element }

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@ -1,10 +1,15 @@
package scientifik.kmath.operations package scientifik.kmath.operations
/**
* Stub for DSL the [Algebra] is.
*/
@DslMarker @DslMarker
annotation class KMathContext annotation class KMathContext
/** /**
* Marker interface for any algebra * Represents an algebraic structure.
*
* @param T the type of element of this structure.
*/ */
interface Algebra<T> { interface Algebra<T> {
/** /**
@ -24,50 +29,123 @@ interface Algebra<T> {
} }
/** /**
* An algebra with numeric representation of members * An algebraic structure where elements can have numeric representation.
*
* @param T the type of element of this structure.
*/ */
interface NumericAlgebra<T> : Algebra<T> { interface NumericAlgebra<T> : Algebra<T> {
/** /**
* Wrap a number * Wraps a number.
*/ */
fun number(value: Number): T fun number(value: Number): T
/**
* Dynamic call of binary operation [operation] on [left] and [right] where left element is [Number].
*/
fun leftSideNumberOperation(operation: String, left: Number, right: T): T = fun leftSideNumberOperation(operation: String, left: Number, right: T): T =
binaryOperation(operation, number(left), right) binaryOperation(operation, number(left), right)
/**
* Dynamic call of binary operation [operation] on [left] and [right] where right element is [Number].
*/
fun rightSideNumberOperation(operation: String, left: T, right: Number): T = fun rightSideNumberOperation(operation: String, left: T, right: Number): T =
leftSideNumberOperation(operation, right, left) leftSideNumberOperation(operation, right, left)
} }
/** /**
* Call a block with an [Algebra] as receiver * Call a block with an [Algebra] as receiver.
*/ */
inline operator fun <A : Algebra<*>, R> A.invoke(block: A.() -> R): R = run(block) inline operator fun <A : Algebra<*>, R> A.invoke(block: A.() -> R): R = run(block)
/** /**
* Space-like operations without neutral element * Represents semispace, i.e. algebraic structure with associative binary operation called "addition" as well as
* multiplication by scalars.
*
* In KMath groups are called spaces, and also define multiplication of element by [Number].
*
* @param T the type of element of this semigroup.
*/ */
interface SpaceOperations<T> : Algebra<T> { interface SpaceOperations<T> : Algebra<T> {
/** /**
* Addition operation for two context elements * Addition of two elements.
*
* @param a the addend.
* @param b the augend.
* @return the sum.
*/ */
fun add(a: T, b: T): T fun add(a: T, b: T): T
/** /**
* Multiplication operation for context element and real number * Multiplication of element by scalar.
*
* @param a the multiplier.
* @param k the multiplicand.
* @return the produce.
*/ */
fun multiply(a: T, k: Number): T fun multiply(a: T, k: Number): T
//Operation to be performed in this context. Could be moved to extensions in case of KEEP-176 // Operations to be performed in this context. Could be moved to extensions in case of KEEP-176
/**
* The negation of this element.
*
* @receiver this value.
* @return the additive inverse of this value.
*/
operator fun T.unaryMinus(): T = multiply(this, -1.0) operator fun T.unaryMinus(): T = multiply(this, -1.0)
/**
* Returns this value.
*
* @receiver this value.
* @return this value.
*/
operator fun T.unaryPlus(): T = this operator fun T.unaryPlus(): T = this
/**
* Addition of two elements.
*
* @receiver the addend.
* @param b the augend.
* @return the sum.
*/
operator fun T.plus(b: T): T = add(this, b) operator fun T.plus(b: T): T = add(this, b)
/**
* Subtraction of two elements.
*
* @receiver the minuend.
* @param b the subtrahend.
* @return the difference.
*/
operator fun T.minus(b: T): T = add(this, -b) operator fun T.minus(b: T): T = add(this, -b)
operator fun T.times(k: Number) = multiply(this, k.toDouble())
operator fun T.div(k: Number) = multiply(this, 1.0 / k.toDouble()) /**
operator fun Number.times(b: T) = b * this * Multiplication of this element by a scalar.
*
* @receiver the multiplier.
* @param k the multiplicand.
* @return the product.
*/
operator fun T.times(k: Number): T = multiply(this, k.toDouble())
/**
* Division of this element by scalar.
*
* @receiver the dividend.
* @param k the divisor.
* @return the quotient.
*/
operator fun T.div(k: Number): T = multiply(this, 1.0 / k.toDouble())
/**
* Multiplication of this number by element.
*
* @receiver the multiplier.
* @param b the multiplicand.
* @return the product.
*/
operator fun Number.times(b: T): T = b * this
override fun unaryOperation(operation: String, arg: T): T = when (operation) { override fun unaryOperation(operation: String, arg: T): T = when (operation) {
PLUS_OPERATION -> arg PLUS_OPERATION -> arg
@ -82,37 +160,54 @@ interface SpaceOperations<T> : Algebra<T> {
} }
companion object { companion object {
const val PLUS_OPERATION = "+" /**
const val MINUS_OPERATION = "-" * The identifier of addition.
const val NOT_OPERATION = "!" */
const val PLUS_OPERATION: String = "+"
/**
* The identifier of subtraction (and negation).
*/
const val MINUS_OPERATION: String = "-"
const val NOT_OPERATION: String = "!"
} }
} }
/** /**
* A general interface representing linear context of some kind. * Represents linear space, i.e. algebraic structure with associative binary operation called "addition" and its neutral
* The context defines sum operation for its elements and multiplication by real value. * element as well as multiplication by scalars.
* One must note that in some cases context is a singleton class, but in some cases it
* works as a context for operations inside it.
* *
* TODO do we need non-commutative context? * @param T the type of element of this group.
*/ */
interface Space<T> : SpaceOperations<T> { interface Space<T> : SpaceOperations<T> {
/** /**
* Neutral element for sum operation * The neutral element of addition.
*/ */
val zero: T val zero: T
} }
/** /**
* Operations on ring without multiplication neutral element * Represents semiring, i.e. algebraic structure with two associative binary operations called "addition" and
* "multiplication".
*
* @param T the type of element of this semiring.
*/ */
interface RingOperations<T> : SpaceOperations<T> { interface RingOperations<T> : SpaceOperations<T> {
/** /**
* Multiplication for two field elements * Multiplies two elements.
*
* @param a the multiplier.
* @param b the multiplicand.
*/ */
fun multiply(a: T, b: T): T fun multiply(a: T, b: T): T
/**
* Multiplies this element by scalar.
*
* @receiver the multiplier.
* @param b the multiplicand.
*/
operator fun T.times(b: T): T = multiply(this, b) operator fun T.times(b: T): T = multiply(this, b)
override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) { override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) {
@ -121,12 +216,18 @@ interface RingOperations<T> : SpaceOperations<T> {
} }
companion object { companion object {
const val TIMES_OPERATION = "*" /**
* The identifier of multiplication.
*/
const val TIMES_OPERATION: String = "*"
} }
} }
/** /**
* The same as {@link Space} but with additional multiplication operation * Represents ring, i.e. algebraic structure with two associative binary operations called "addition" and
* "multiplication" and their neutral elements.
*
* @param T the type of element of this ring.
*/ */
interface Ring<T> : Space<T>, RingOperations<T>, NumericAlgebra<T> { interface Ring<T> : Space<T>, RingOperations<T>, NumericAlgebra<T> {
/** /**
@ -150,20 +251,64 @@ interface Ring<T> : Space<T>, RingOperations<T>, NumericAlgebra<T> {
else -> super.rightSideNumberOperation(operation, left, right) else -> super.rightSideNumberOperation(operation, left, right)
} }
/**
* Addition of element and scalar.
*
* @receiver the addend.
* @param b the augend.
*/
operator fun T.plus(b: Number): T = this + number(b)
operator fun T.plus(b: Number) = this.plus(number(b)) /**
operator fun Number.plus(b: T) = b + this * Addition of scalar and element.
*
* @receiver the addend.
* @param b the augend.
*/
operator fun Number.plus(b: T): T = b + this
operator fun T.minus(b: Number) = this.minus(number(b)) /**
operator fun Number.minus(b: T) = -b + this * Subtraction of element from number.
*
* @receiver the minuend.
* @param b the subtrahend.
* @receiver the difference.
*/
operator fun T.minus(b: Number): T = this - number(b)
/**
* Subtraction of number from element.
*
* @receiver the minuend.
* @param b the subtrahend.
* @receiver the difference.
*/
operator fun Number.minus(b: T): T = -b + this
} }
/** /**
* All ring operations but without neutral elements * Represents semifield, i.e. algebraic structure with three operations: associative "addition" and "multiplication",
* and "division".
*
* @param T the type of element of this semifield.
*/ */
interface FieldOperations<T> : RingOperations<T> { interface FieldOperations<T> : RingOperations<T> {
/**
* Division of two elements.
*
* @param a the dividend.
* @param b the divisor.
* @return the quotient.
*/
fun divide(a: T, b: T): T fun divide(a: T, b: T): T
/**
* Division of two elements.
*
* @receiver the dividend.
* @param b the divisor.
* @return the quotient.
*/
operator fun T.div(b: T): T = divide(this, b) operator fun T.div(b: T): T = divide(this, b)
override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) { override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) {
@ -172,13 +317,26 @@ interface FieldOperations<T> : RingOperations<T> {
} }
companion object { companion object {
const val DIV_OPERATION = "/" /**
* The identifier of division.
*/
const val DIV_OPERATION: String = "/"
} }
} }
/** /**
* Four operations algebra * Represents field, i.e. algebraic structure with three operations: associative "addition" and "multiplication",
* and "division" and their neutral elements.
*
* @param T the type of element of this semifield.
*/ */
interface Field<T> : Ring<T>, FieldOperations<T> { interface Field<T> : Ring<T>, FieldOperations<T> {
operator fun Number.div(b: T) = this * divide(one, b) /**
* Division of element by scalar.
*
* @receiver the dividend.
* @param b the divisor.
* @return the quotient.
*/
operator fun Number.div(b: T): T = this * divide(one, b)
} }

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@ -2,47 +2,107 @@ package scientifik.kmath.operations
/** /**
* The generic mathematics elements which is able to store its context * The generic mathematics elements which is able to store its context
* @param T the type of space operation results *
* @param I self type of the element. Needed for static type checking * @param C the type of mathematical context for this element.
* @param C the type of mathematical context for this element
*/ */
interface MathElement<C> { interface MathElement<C> {
/** /**
* The context this element belongs to * The context this element belongs to.
*/ */
val context: C val context: C
} }
/**
* Represents element that can be wrapped to its "primitive" value.
*
* @param T the type wrapped by this wrapper.
* @param I the type of this wrapper.
*/
interface MathWrapper<T, I> { interface MathWrapper<T, I> {
/**
* Unwraps [I] to [T].
*/
fun unwrap(): T fun unwrap(): T
/**
* Wraps [T] to [I].
*/
fun T.wrap(): I fun T.wrap(): I
} }
/** /**
* The element of linear context * The element of [Space].
* @param T the type of space operation results *
* @param I self type of the element. Needed for static type checking * @param T the type of space operation results.
* @param S the type of space * @param I self type of the element. Needed for static type checking.
* @param S the type of space.
*/ */
interface SpaceElement<T, I : SpaceElement<T, I, S>, S : Space<T>> : MathElement<S>, MathWrapper<T, I> { interface SpaceElement<T, I : SpaceElement<T, I, S>, S : Space<T>> : MathElement<S>, MathWrapper<T, I> {
/**
* Adds element to this one.
*
* @param b the augend.
* @return the sum.
*/
operator fun plus(b: T): I = context.add(unwrap(), b).wrap()
operator fun plus(b: T) = context.add(unwrap(), b).wrap() /**
operator fun minus(b: T) = context.add(unwrap(), context.multiply(b, -1.0)).wrap() * Subtracts element from this one.
operator fun times(k: Number) = context.multiply(unwrap(), k.toDouble()).wrap() *
operator fun div(k: Number) = context.multiply(unwrap(), 1.0 / k.toDouble()).wrap() * @param b the subtrahend.
* @return the difference.
*/
operator fun minus(b: T): I = context.add(unwrap(), context.multiply(b, -1.0)).wrap()
/**
* Multiplies this element by number.
*
* @param k the multiplicand.
* @return the product.
*/
operator fun times(k: Number): I = context.multiply(unwrap(), k.toDouble()).wrap()
/**
* Divides this element by number.
*
* @param k the divisor.
* @return the quotient.
*/
operator fun div(k: Number): I = context.multiply(unwrap(), 1.0 / k.toDouble()).wrap()
} }
/** /**
* Ring element * The element of [Ring].
*
* @param T the type of space operation results.
* @param I self type of the element. Needed for static type checking.
* @param R the type of space.
*/ */
interface RingElement<T, I : RingElement<T, I, R>, R : Ring<T>> : SpaceElement<T, I, R> { interface RingElement<T, I : RingElement<T, I, R>, R : Ring<T>> : SpaceElement<T, I, R> {
operator fun times(b: T) = context.multiply(unwrap(), b).wrap() /**
* Multiplies this element by another one.
*
* @param b the multiplicand.
* @return the product.
*/
operator fun times(b: T): I = context.multiply(unwrap(), b).wrap()
} }
/** /**
* Field element * The element of [Field].
*
* @param T the type of space operation results.
* @param I self type of the element. Needed for static type checking.
* @param F the type of field.
*/ */
interface FieldElement<T, I : FieldElement<T, I, F>, F : Field<T>> : RingElement<T, I, F> { interface FieldElement<T, I : FieldElement<T, I, F>, F : Field<T>> : RingElement<T, I, F> {
override val context: F override val context: F
operator fun div(b: T) = context.divide(unwrap(), b).wrap()
/**
* Divides this element by another one.
*
* @param b the divisor.
* @return the quotient.
*/
operator fun div(b: T): I = context.divide(unwrap(), b).wrap()
} }

View File

@ -1,15 +1,62 @@
package scientifik.kmath.operations package scientifik.kmath.operations
/**
* Returns the sum of all elements in the iterable in this [Space].
*
* @receiver the algebra that provides addition.
* @param data the collection to sum up.
* @return the sum.
*/
fun <T> Space<T>.sum(data: Iterable<T>): T = data.fold(zero) { left, right -> add(left, right) } fun <T> Space<T>.sum(data: Iterable<T>): T = data.fold(zero) { left, right -> add(left, right) }
/**
* Returns the sum of all elements in the sequence in this [Space].
*
* @receiver the algebra that provides addition.
* @param data the collection to sum up.
* @return the sum.
*/
fun <T> Space<T>.sum(data: Sequence<T>): T = data.fold(zero) { left, right -> add(left, right) } fun <T> Space<T>.sum(data: Sequence<T>): T = data.fold(zero) { left, right -> add(left, right) }
/**
* Returns the sum of all elements in the iterable in provided space.
*
* @receiver the collection to sum up.
* @param space the algebra that provides addition.
* @return the sum.
*/
fun <T : Any, S : Space<T>> Iterable<T>.sumWith(space: S): T = space.sum(this) fun <T : Any, S : Space<T>> Iterable<T>.sumWith(space: S): T = space.sum(this)
//TODO optimized power operation //TODO optimized power operation
fun <T> RingOperations<T>.power(arg: T, power: Int): T {
/**
* Raises [arg] to the natural power [power].
*
* @receiver the algebra to provide multiplication.
* @param arg the base.
* @param power the exponent.
* @return the base raised to the power.
*/
fun <T> Ring<T>.power(arg: T, power: Int): T {
require(power >= 0) { "The power can't be negative." }
require(power != 0 || arg != zero) { "The $zero raised to $power is not defined." }
if (power == 0) return one
var res = arg var res = arg
repeat(power - 1) { repeat(power - 1) { res *= arg }
res *= arg
}
return res return res
} }
/**
* Raises [arg] to the integer power [power].
*
* @receiver the algebra to provide multiplication and division.
* @param arg the base.
* @param power the exponent.
* @return the base raised to the power.
*/
fun <T> Field<T>.power(arg: T, power: Int): T {
require(power != 0 || arg != zero) { "The $zero raised to $power is not defined." }
if (power == 0) return one
if (power < 0) return one / (this as Ring<T>).power(arg, -power)
return (this as Ring<T>).power(arg, power)
}

View File

@ -194,8 +194,8 @@ class BigInt internal constructor(
} }
infix fun or(other: BigInt): BigInt { infix fun or(other: BigInt): BigInt {
if (this == ZERO) return other; if (this == ZERO) return other
if (other == ZERO) return this; if (other == ZERO) return this
val resSize = max(this.magnitude.size, other.magnitude.size) val resSize = max(this.magnitude.size, other.magnitude.size)
val newMagnitude: Magnitude = Magnitude(resSize) val newMagnitude: Magnitude = Magnitude(resSize)
for (i in 0 until resSize) { for (i in 0 until resSize) {
@ -210,7 +210,7 @@ class BigInt internal constructor(
} }
infix fun and(other: BigInt): BigInt { infix fun and(other: BigInt): BigInt {
if ((this == ZERO) or (other == ZERO)) return ZERO; if ((this == ZERO) or (other == ZERO)) return ZERO
val resSize = min(this.magnitude.size, other.magnitude.size) val resSize = min(this.magnitude.size, other.magnitude.size)
val newMagnitude: Magnitude = Magnitude(resSize) val newMagnitude: Magnitude = Magnitude(resSize)
for (i in 0 until resSize) { for (i in 0 until resSize) {
@ -260,7 +260,7 @@ class BigInt internal constructor(
} }
companion object { companion object {
const val BASE = 0xffffffffUL const val BASE: ULong = 0xffffffffUL
const val BASE_SIZE: Int = 32 const val BASE_SIZE: Int = 32
val ZERO: BigInt = BigInt(0, uintArrayOf()) val ZERO: BigInt = BigInt(0, uintArrayOf())
val ONE: BigInt = BigInt(1, uintArrayOf(1u)) val ONE: BigInt = BigInt(1, uintArrayOf(1u))
@ -394,12 +394,12 @@ fun abs(x: BigInt): BigInt = x.abs()
/** /**
* Convert this [Int] to [BigInt] * Convert this [Int] to [BigInt]
*/ */
fun Int.toBigInt() = BigInt(sign.toByte(), uintArrayOf(kotlin.math.abs(this).toUInt())) fun Int.toBigInt(): BigInt = BigInt(sign.toByte(), uintArrayOf(kotlin.math.abs(this).toUInt()))
/** /**
* Convert this [Long] to [BigInt] * Convert this [Long] to [BigInt]
*/ */
fun Long.toBigInt() = BigInt( fun Long.toBigInt(): BigInt = BigInt(
sign.toByte(), stripLeadingZeros( sign.toByte(), stripLeadingZeros(
uintArrayOf( uintArrayOf(
(kotlin.math.abs(this).toULong() and BASE).toUInt(), (kotlin.math.abs(this).toULong() and BASE).toUInt(),
@ -411,17 +411,17 @@ fun Long.toBigInt() = BigInt(
/** /**
* Convert UInt to [BigInt] * Convert UInt to [BigInt]
*/ */
fun UInt.toBigInt() = BigInt(1, uintArrayOf(this)) fun UInt.toBigInt(): BigInt = BigInt(1, uintArrayOf(this))
/** /**
* Convert ULong to [BigInt] * Convert ULong to [BigInt]
*/ */
fun ULong.toBigInt() = BigInt( fun ULong.toBigInt(): BigInt = BigInt(
1, 1,
stripLeadingZeros( stripLeadingZeros(
uintArrayOf( uintArrayOf(
(this and BigInt.BASE).toUInt(), (this and BASE).toUInt(),
((this shr BigInt.BASE_SIZE) and BigInt.BASE).toUInt() ((this shr BASE_SIZE) and BASE).toUInt()
) )
) )
) )
@ -434,7 +434,7 @@ fun UIntArray.toBigInt(sign: Byte): BigInt {
return BigInt(sign, this.copyOf()) return BigInt(sign, this.copyOf())
} }
val hexChToInt = hashMapOf( val hexChToInt: MutableMap<Char, Int> = hashMapOf(
'0' to 0, '1' to 1, '2' to 2, '3' to 3, '0' to 0, '1' to 1, '2' to 2, '3' to 3,
'4' to 4, '5' to 5, '6' to 6, '7' to 7, '4' to 4, '5' to 5, '6' to 6, '7' to 7,
'8' to 8, '9' to 9, 'A' to 10, 'B' to 11, '8' to 8, '9' to 9, 'A' to 10, 'B' to 11,

View File

@ -11,14 +11,17 @@ import kotlin.math.*
private val PI_DIV_2 = Complex(PI / 2, 0) private val PI_DIV_2 = Complex(PI / 2, 0)
/** /**
* A field for complex numbers * A field of [Complex].
*/ */
object ComplexField : ExtendedField<Complex> { object ComplexField : ExtendedField<Complex> {
override val zero: Complex = Complex(0.0, 0.0) override val zero: Complex = Complex(0.0, 0.0)
override val one: Complex = Complex(1.0, 0.0) override val one: Complex = Complex(1.0, 0.0)
val i = Complex(0.0, 1.0) /**
* The imaginary unit.
*/
val i: Complex = Complex(0.0, 1.0)
override fun add(a: Complex, b: Complex): Complex = Complex(a.re + b.re, a.im + b.im) override fun add(a: Complex, b: Complex): Complex = Complex(a.re + b.re, a.im + b.im)
@ -45,25 +48,59 @@ object ComplexField : ExtendedField<Complex> {
override fun ln(arg: Complex): Complex = ln(arg.r) + i * atan2(arg.im, arg.re) override fun ln(arg: Complex): Complex = ln(arg.r) + i * atan2(arg.im, arg.re)
operator fun Double.plus(c: Complex) = add(this.toComplex(), c) /**
* Adds complex number to real one.
*
* @receiver the addend.
* @param c the augend.
* @return the sum.
*/
operator fun Double.plus(c: Complex): Complex = add(this.toComplex(), c)
operator fun Double.minus(c: Complex) = add(this.toComplex(), -c) /**
* Subtracts complex number from real one.
*
* @receiver the minuend.
* @param c the subtrahend.
* @return the difference.
*/
operator fun Double.minus(c: Complex): Complex = add(this.toComplex(), -c)
operator fun Complex.plus(d: Double) = d + this /**
* Adds real number to complex one.
*
* @receiver the addend.
* @param d the augend.
* @return the sum.
*/
operator fun Complex.plus(d: Double): Complex = d + this
operator fun Complex.minus(d: Double) = add(this, -d.toComplex()) /**
* Subtracts real number from complex one.
*
* @receiver the minuend.
* @param d the subtrahend.
* @return the difference.
*/
operator fun Complex.minus(d: Double): Complex = add(this, -d.toComplex())
operator fun Double.times(c: Complex) = Complex(c.re * this, c.im * this) /**
* Multiplies real number by complex one.
*
* @receiver the multiplier.
* @param c the multiplicand.
* @receiver the product.
*/
operator fun Double.times(c: Complex): Complex = Complex(c.re * this, c.im * this)
override fun symbol(value: String): Complex = if (value == "i") { override fun symbol(value: String): Complex = if (value == "i") i else super.symbol(value)
i
} else {
super.symbol(value)
}
} }
/** /**
* Complex number class * Represents complex number.
*
* @property re The real part.
* @property im The imaginary part.
*/ */
data class Complex(val re: Double, val im: Double) : FieldElement<Complex, Complex, ComplexField>, Comparable<Complex> { data class Complex(val re: Double, val im: Double) : FieldElement<Complex, Complex, ComplexField>, Comparable<Complex> {
constructor(re: Number, im: Number) : this(re.toDouble(), im.toDouble()) constructor(re: Number, im: Number) : this(re.toDouble(), im.toDouble())
@ -104,7 +141,13 @@ val Complex.r: Double get() = sqrt(re * re + im * im)
*/ */
val Complex.theta: Double get() = atan(im / re) val Complex.theta: Double get() = atan(im / re)
fun Double.toComplex() = Complex(this, 0.0) /**
* Creates a complex number with real part equal to this real.
*
* @receiver the real part.
* @return the new complex number.
*/
fun Double.toComplex(): Complex = Complex(this, 0.0)
inline fun Buffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer<Complex> { inline fun Buffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer<Complex> {
return MemoryBuffer.create(Complex, size, init) return MemoryBuffer.create(Complex, size, init)

View File

@ -1,11 +1,10 @@
package scientifik.kmath.operations package scientifik.kmath.operations
import scientifik.kmath.operations.RealField.pow
import kotlin.math.abs import kotlin.math.abs
import kotlin.math.pow as kpow import kotlin.math.pow as kpow
/** /**
* Advanced Number-like field that implements basic operations * Advanced Number-like semifield that implements basic operations.
*/ */
interface ExtendedFieldOperations<T> : interface ExtendedFieldOperations<T> :
InverseTrigonometricOperations<T>, InverseTrigonometricOperations<T>,
@ -28,6 +27,10 @@ interface ExtendedFieldOperations<T> :
} }
} }
/**
* Advanced Number-like field that implements basic operations.
*/
interface ExtendedField<T> : ExtendedFieldOperations<T>, Field<T> { interface ExtendedField<T> : ExtendedFieldOperations<T>, Field<T> {
override fun rightSideNumberOperation(operation: String, left: T, right: Number): T = when (operation) { override fun rightSideNumberOperation(operation: String, left: T, right: Number): T = when (operation) {
PowerOperations.POW_OPERATION -> power(left, right) PowerOperations.POW_OPERATION -> power(left, right)
@ -38,6 +41,8 @@ interface ExtendedField<T> : ExtendedFieldOperations<T>, Field<T> {
/** /**
* Real field element wrapping double. * Real field element wrapping double.
* *
* @property value the [Double] value wrapped by this [Real].
*
* TODO inline does not work due to compiler bug. Waiting for fix for KT-27586 * TODO inline does not work due to compiler bug. Waiting for fix for KT-27586
*/ */
inline class Real(val value: Double) : FieldElement<Double, Real, RealField> { inline class Real(val value: Double) : FieldElement<Double, Real, RealField> {
@ -45,47 +50,47 @@ inline class Real(val value: Double) : FieldElement<Double, Real, RealField> {
override fun Double.wrap(): Real = Real(value) override fun Double.wrap(): Real = Real(value)
override val context get() = RealField override val context: RealField get() = RealField
companion object companion object
} }
/** /**
* A field for double without boxing. Does not produce appropriate field element * A field for [Double] without boxing. Does not produce appropriate field element.
*/ */
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object RealField : ExtendedField<Double>, Norm<Double, Double> { object RealField : ExtendedField<Double>, Norm<Double, Double> {
override val zero: Double = 0.0 override val zero: Double = 0.0
override inline fun add(a: Double, b: Double) = a + b override inline fun add(a: Double, b: Double): Double = a + b
override inline fun multiply(a: Double, b: Double) = a * b override inline fun multiply(a: Double, b: Double): Double = a * b
override inline fun multiply(a: Double, k: Number) = a * k.toDouble() override inline fun multiply(a: Double, k: Number): Double = a * k.toDouble()
override val one: Double = 1.0 override val one: Double = 1.0
override inline fun divide(a: Double, b: Double) = a / b override inline fun divide(a: Double, b: Double): Double = a / b
override inline fun sin(arg: Double) = kotlin.math.sin(arg) override inline fun sin(arg: Double): Double = kotlin.math.sin(arg)
override inline fun cos(arg: Double) = kotlin.math.cos(arg) override inline fun cos(arg: Double): Double = kotlin.math.cos(arg)
override inline fun tan(arg: Double): Double = kotlin.math.tan(arg) override inline fun tan(arg: Double): Double = kotlin.math.tan(arg)
override inline fun acos(arg: Double): Double = kotlin.math.acos(arg) override inline fun acos(arg: Double): Double = kotlin.math.acos(arg)
override inline fun asin(arg: Double): Double = kotlin.math.asin(arg) override inline fun asin(arg: Double): Double = kotlin.math.asin(arg)
override inline fun atan(arg: Double): Double = kotlin.math.atan(arg) override inline fun atan(arg: Double): Double = kotlin.math.atan(arg)
override inline fun power(arg: Double, pow: Number) = arg.kpow(pow.toDouble()) override inline fun power(arg: Double, pow: Number): Double = arg.kpow(pow.toDouble())
override inline fun exp(arg: Double) = kotlin.math.exp(arg) override inline fun exp(arg: Double): Double = kotlin.math.exp(arg)
override inline fun ln(arg: Double) = kotlin.math.ln(arg) override inline fun ln(arg: Double): Double = kotlin.math.ln(arg)
override inline fun norm(arg: Double) = abs(arg) override inline fun norm(arg: Double): Double = abs(arg)
override inline fun Double.unaryMinus() = -this override inline fun Double.unaryMinus(): Double = -this
override inline fun Double.plus(b: Double) = this + b override inline fun Double.plus(b: Double): Double = this + b
override inline fun Double.minus(b: Double) = this - b override inline fun Double.minus(b: Double): Double = this - b
override inline fun Double.times(b: Double) = this * b override inline fun Double.times(b: Double): Double = this * b
override inline fun Double.div(b: Double) = this / b override inline fun Double.div(b: Double): Double = this / b
override fun binaryOperation(operation: String, left: Double, right: Double): Double = when (operation) { override fun binaryOperation(operation: String, left: Double, right: Double): Double = when (operation) {
PowerOperations.POW_OPERATION -> left pow right PowerOperations.POW_OPERATION -> left pow right
@ -93,39 +98,42 @@ object RealField : ExtendedField<Double>, Norm<Double, Double> {
} }
} }
/**
* A field for [Float] without boxing. Does not produce appropriate field element.
*/
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object FloatField : ExtendedField<Float>, Norm<Float, Float> { object FloatField : ExtendedField<Float>, Norm<Float, Float> {
override val zero: Float = 0f override val zero: Float = 0f
override inline fun add(a: Float, b: Float) = a + b override inline fun add(a: Float, b: Float): Float = a + b
override inline fun multiply(a: Float, b: Float) = a * b override inline fun multiply(a: Float, b: Float): Float = a * b
override inline fun multiply(a: Float, k: Number) = a * k.toFloat() override inline fun multiply(a: Float, k: Number): Float = a * k.toFloat()
override val one: Float = 1f override val one: Float = 1f
override inline fun divide(a: Float, b: Float) = a / b override inline fun divide(a: Float, b: Float): Float = a / b
override inline fun sin(arg: Float) = kotlin.math.sin(arg) override inline fun sin(arg: Float): Float = kotlin.math.sin(arg)
override inline fun cos(arg: Float) = kotlin.math.cos(arg) override inline fun cos(arg: Float): Float = kotlin.math.cos(arg)
override inline fun tan(arg: Float) = kotlin.math.tan(arg) override inline fun tan(arg: Float): Float = kotlin.math.tan(arg)
override inline fun acos(arg: Float) = kotlin.math.acos(arg) override inline fun acos(arg: Float): Float = kotlin.math.acos(arg)
override inline fun asin(arg: Float) = kotlin.math.asin(arg) override inline fun asin(arg: Float): Float = kotlin.math.asin(arg)
override inline fun atan(arg: Float) = kotlin.math.atan(arg) override inline fun atan(arg: Float): Float = kotlin.math.atan(arg)
override inline fun power(arg: Float, pow: Number) = arg.pow(pow.toFloat()) override inline fun power(arg: Float, pow: Number): Float = arg.pow(pow.toFloat())
override inline fun exp(arg: Float) = kotlin.math.exp(arg) override inline fun exp(arg: Float): Float = kotlin.math.exp(arg)
override inline fun ln(arg: Float) = kotlin.math.ln(arg) override inline fun ln(arg: Float): Float = kotlin.math.ln(arg)
override inline fun norm(arg: Float) = abs(arg) override inline fun norm(arg: Float): Float = abs(arg)
override inline fun Float.unaryMinus() = -this override inline fun Float.unaryMinus(): Float = -this
override inline fun Float.plus(b: Float) = this + b override inline fun Float.plus(b: Float): Float = this + b
override inline fun Float.minus(b: Float) = this - b override inline fun Float.minus(b: Float): Float = this - b
override inline fun Float.times(b: Float) = this * b override inline fun Float.times(b: Float): Float = this * b
override inline fun Float.div(b: Float) = this / b override inline fun Float.div(b: Float): Float = this / b
} }
/** /**
@ -134,14 +142,14 @@ object FloatField : ExtendedField<Float>, Norm<Float, Float> {
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object IntRing : Ring<Int>, Norm<Int, Int> { object IntRing : Ring<Int>, Norm<Int, Int> {
override val zero: Int = 0 override val zero: Int = 0
override inline fun add(a: Int, b: Int) = a + b override inline fun add(a: Int, b: Int): Int = a + b
override inline fun multiply(a: Int, b: Int) = a * b override inline fun multiply(a: Int, b: Int): Int = a * b
override inline fun multiply(a: Int, k: Number) = k.toInt() * a override inline fun multiply(a: Int, k: Number): Int = k.toInt() * a
override val one: Int = 1 override val one: Int = 1
override inline fun norm(arg: Int) = abs(arg) override inline fun norm(arg: Int): Int = abs(arg)
override inline fun Int.unaryMinus() = -this override inline fun Int.unaryMinus(): Int = -this
override inline fun Int.plus(b: Int): Int = this + b override inline fun Int.plus(b: Int): Int = this + b
@ -156,20 +164,20 @@ object IntRing : Ring<Int>, Norm<Int, Int> {
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object ShortRing : Ring<Short>, Norm<Short, Short> { object ShortRing : Ring<Short>, Norm<Short, Short> {
override val zero: Short = 0 override val zero: Short = 0
override inline fun add(a: Short, b: Short) = (a + b).toShort() override inline fun add(a: Short, b: Short): Short = (a + b).toShort()
override inline fun multiply(a: Short, b: Short) = (a * b).toShort() override inline fun multiply(a: Short, b: Short): Short = (a * b).toShort()
override inline fun multiply(a: Short, k: Number) = (a * k.toShort()).toShort() override inline fun multiply(a: Short, k: Number): Short = (a * k.toShort()).toShort()
override val one: Short = 1 override val one: Short = 1
override fun norm(arg: Short): Short = if (arg > 0) arg else (-arg).toShort() override fun norm(arg: Short): Short = if (arg > 0) arg else (-arg).toShort()
override inline fun Short.unaryMinus() = (-this).toShort() override inline fun Short.unaryMinus(): Short = (-this).toShort()
override inline fun Short.plus(b: Short) = (this + b).toShort() override inline fun Short.plus(b: Short): Short = (this + b).toShort()
override inline fun Short.minus(b: Short) = (this - b).toShort() override inline fun Short.minus(b: Short): Short = (this - b).toShort()
override inline fun Short.times(b: Short) = (this * b).toShort() override inline fun Short.times(b: Short): Short = (this * b).toShort()
} }
/** /**
@ -178,20 +186,20 @@ object ShortRing : Ring<Short>, Norm<Short, Short> {
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object ByteRing : Ring<Byte>, Norm<Byte, Byte> { object ByteRing : Ring<Byte>, Norm<Byte, Byte> {
override val zero: Byte = 0 override val zero: Byte = 0
override inline fun add(a: Byte, b: Byte) = (a + b).toByte() override inline fun add(a: Byte, b: Byte): Byte = (a + b).toByte()
override inline fun multiply(a: Byte, b: Byte) = (a * b).toByte() override inline fun multiply(a: Byte, b: Byte): Byte = (a * b).toByte()
override inline fun multiply(a: Byte, k: Number) = (a * k.toByte()).toByte() override inline fun multiply(a: Byte, k: Number): Byte = (a * k.toByte()).toByte()
override val one: Byte = 1 override val one: Byte = 1
override fun norm(arg: Byte): Byte = if (arg > 0) arg else (-arg).toByte() override fun norm(arg: Byte): Byte = if (arg > 0) arg else (-arg).toByte()
override inline fun Byte.unaryMinus() = (-this).toByte() override inline fun Byte.unaryMinus(): Byte = (-this).toByte()
override inline fun Byte.plus(b: Byte) = (this + b).toByte() override inline fun Byte.plus(b: Byte): Byte = (this + b).toByte()
override inline fun Byte.minus(b: Byte) = (this - b).toByte() override inline fun Byte.minus(b: Byte): Byte = (this - b).toByte()
override inline fun Byte.times(b: Byte) = (this * b).toByte() override inline fun Byte.times(b: Byte): Byte = (this * b).toByte()
} }
/** /**
@ -200,18 +208,18 @@ object ByteRing : Ring<Byte>, Norm<Byte, Byte> {
@Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE")
object LongRing : Ring<Long>, Norm<Long, Long> { object LongRing : Ring<Long>, Norm<Long, Long> {
override val zero: Long = 0 override val zero: Long = 0
override inline fun add(a: Long, b: Long) = (a + b) override inline fun add(a: Long, b: Long): Long = (a + b)
override inline fun multiply(a: Long, b: Long) = (a * b) override inline fun multiply(a: Long, b: Long): Long = (a * b)
override inline fun multiply(a: Long, k: Number) = a * k.toLong() override inline fun multiply(a: Long, k: Number): Long = a * k.toLong()
override val one: Long = 1 override val one: Long = 1
override fun norm(arg: Long): Long = abs(arg) override fun norm(arg: Long): Long = abs(arg)
override inline fun Long.unaryMinus() = (-this) override inline fun Long.unaryMinus(): Long = (-this)
override inline fun Long.plus(b: Long) = (this + b) override inline fun Long.plus(b: Long): Long = (this + b)
override inline fun Long.minus(b: Long) = (this - b) override inline fun Long.minus(b: Long): Long = (this - b)
override inline fun Long.times(b: Long) = (this * b) override inline fun Long.times(b: Long): Long = (this * b)
} }

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@ -1,84 +1,214 @@
package scientifik.kmath.operations package scientifik.kmath.operations
/* Trigonometric operations */
/** /**
* A container for trigonometric operations for specific type. Trigonometric operations are limited to fields. * A container for trigonometric operations for specific type. They are limited to semifields.
* *
* The operations are not exposed to class directly to avoid method bloat but instead are declared in the field. * The operations are not exposed to class directly to avoid method bloat but instead are declared in the field.
* It also allows to override behavior for optional operations * It also allows to override behavior for optional operations.
*
*/ */
interface TrigonometricOperations<T> : FieldOperations<T> { interface TrigonometricOperations<T> : FieldOperations<T> {
/**
* Computes the sine of [arg].
*/
fun sin(arg: T): T fun sin(arg: T): T
/**
* Computes the cosine of [arg].
*/
fun cos(arg: T): T fun cos(arg: T): T
/**
* Computes the tangent of [arg].
*/
fun tan(arg: T): T fun tan(arg: T): T
companion object { companion object {
const val SIN_OPERATION = "sin" /**
const val COS_OPERATION = "cos" * The identifier of sine.
const val TAN_OPERATION = "tan" */
const val SIN_OPERATION: String = "sin"
/**
* The identifier of cosine.
*/
const val COS_OPERATION: String = "cos"
/**
* The identifier of tangent.
*/
const val TAN_OPERATION: String = "tan"
} }
} }
/**
* A container for inverse trigonometric operations for specific type. They are limited to semifields.
*
* The operations are not exposed to class directly to avoid method bloat but instead are declared in the field.
* It also allows to override behavior for optional operations.
*/
interface InverseTrigonometricOperations<T> : TrigonometricOperations<T> { interface InverseTrigonometricOperations<T> : TrigonometricOperations<T> {
/**
* Computes the inverse sine of [arg].
*/
fun asin(arg: T): T fun asin(arg: T): T
/**
* Computes the inverse cosine of [arg].
*/
fun acos(arg: T): T fun acos(arg: T): T
/**
* Computes the inverse tangent of [arg].
*/
fun atan(arg: T): T fun atan(arg: T): T
companion object { companion object {
const val ASIN_OPERATION = "asin" /**
const val ACOS_OPERATION = "acos" * The identifier of inverse sine.
const val ATAN_OPERATION = "atan" */
const val ASIN_OPERATION: String = "asin"
/**
* The identifier of inverse cosine.
*/
const val ACOS_OPERATION: String = "acos"
/**
* The identifier of inverse tangent.
*/
const val ATAN_OPERATION: String = "atan"
} }
} }
fun <T : MathElement<out TrigonometricOperations<T>>> sin(arg: T): T = arg.context.sin(arg)
fun <T : MathElement<out TrigonometricOperations<T>>> cos(arg: T): T = arg.context.cos(arg)
fun <T : MathElement<out TrigonometricOperations<T>>> tan(arg: T): T = arg.context.tan(arg)
fun <T : MathElement<out InverseTrigonometricOperations<T>>> asin(arg: T): T = arg.context.asin(arg)
fun <T : MathElement<out InverseTrigonometricOperations<T>>> acos(arg: T): T = arg.context.acos(arg)
fun <T : MathElement<out InverseTrigonometricOperations<T>>> atan(arg: T): T = arg.context.atan(arg)
/* Power and roots */
/** /**
* A context extension to include power operations like square roots, etc * Computes the sine of [arg].
*/
fun <T : MathElement<out TrigonometricOperations<T>>> sin(arg: T): T = arg.context.sin(arg)
/**
* Computes the cosine of [arg].
*/
fun <T : MathElement<out TrigonometricOperations<T>>> cos(arg: T): T = arg.context.cos(arg)
/**
* Computes the tangent of [arg].
*/
fun <T : MathElement<out TrigonometricOperations<T>>> tan(arg: T): T = arg.context.tan(arg)
/**
* Computes the inverse sine of [arg].
*/
fun <T : MathElement<out InverseTrigonometricOperations<T>>> asin(arg: T): T = arg.context.asin(arg)
/**
* Computes the inverse cosine of [arg].
*/
fun <T : MathElement<out InverseTrigonometricOperations<T>>> acos(arg: T): T = arg.context.acos(arg)
/**
* Computes the inverse tangent of [arg].
*/
fun <T : MathElement<out InverseTrigonometricOperations<T>>> atan(arg: T): T = arg.context.atan(arg)
/**
* A context extension to include power operations based on exponentiation.
*/ */
interface PowerOperations<T> : Algebra<T> { interface PowerOperations<T> : Algebra<T> {
/**
* Raises [arg] to the power [pow].
*/
fun power(arg: T, pow: Number): T fun power(arg: T, pow: Number): T
fun sqrt(arg: T) = power(arg, 0.5)
infix fun T.pow(pow: Number) = power(this, pow) /**
* Computes the square root of the value [arg].
*/
fun sqrt(arg: T): T = power(arg, 0.5)
/**
* Raises this value to the power [pow].
*/
infix fun T.pow(pow: Number): T = power(this, pow)
companion object { companion object {
const val POW_OPERATION = "pow" /**
const val SQRT_OPERATION = "sqrt" * The identifier of exponentiation.
*/
const val POW_OPERATION: String = "pow"
/**
* The identifier of square root.
*/
const val SQRT_OPERATION: String = "sqrt"
} }
} }
/**
* Raises this element to the power [pow].
*
* @receiver the base.
* @param power the exponent.
* @return the base raised to the power.
*/
infix fun <T : MathElement<out PowerOperations<T>>> T.pow(power: Double): T = context.power(this, power) infix fun <T : MathElement<out PowerOperations<T>>> T.pow(power: Double): T = context.power(this, power)
/**
* Computes the square root of the value [arg].
*/
fun <T : MathElement<out PowerOperations<T>>> sqrt(arg: T): T = arg pow 0.5 fun <T : MathElement<out PowerOperations<T>>> sqrt(arg: T): T = arg pow 0.5
/**
* Computes the square of the value [arg].
*/
fun <T : MathElement<out PowerOperations<T>>> sqr(arg: T): T = arg pow 2.0 fun <T : MathElement<out PowerOperations<T>>> sqr(arg: T): T = arg pow 2.0
/* Exponential */ /**
* A container for operations related to `exp` and `ln` functions.
*/
interface ExponentialOperations<T> : Algebra<T> { interface ExponentialOperations<T> : Algebra<T> {
/**
* Computes Euler's number `e` raised to the power of the value [arg].
*/
fun exp(arg: T): T fun exp(arg: T): T
/**
* Computes the natural logarithm (base `e`) of the value [arg].
*/
fun ln(arg: T): T fun ln(arg: T): T
companion object { companion object {
const val EXP_OPERATION = "exp" /**
const val LN_OPERATION = "ln" * The identifier of exponential function.
*/
const val EXP_OPERATION: String = "exp"
/**
* The identifier of natural logarithm.
*/
const val LN_OPERATION: String = "ln"
} }
} }
/**
* The identifier of exponential function.
*/
fun <T : MathElement<out ExponentialOperations<T>>> exp(arg: T): T = arg.context.exp(arg) fun <T : MathElement<out ExponentialOperations<T>>> exp(arg: T): T = arg.context.exp(arg)
/**
* The identifier of natural logarithm.
*/
fun <T : MathElement<out ExponentialOperations<T>>> ln(arg: T): T = arg.context.ln(arg) fun <T : MathElement<out ExponentialOperations<T>>> ln(arg: T): T = arg.context.ln(arg)
/**
* A container for norm functional on element.
*/
interface Norm<in T : Any, out R> { interface Norm<in T : Any, out R> {
/**
* Computes the norm of [arg] (i.e. absolute value or vector length).
*/
fun norm(arg: T): R fun norm(arg: T): R
} }
/**
* Computes the norm of [arg] (i.e. absolute value or vector length).
*/
fun <T : MathElement<out Norm<T, R>>, R> norm(arg: T): R = arg.context.norm(arg) fun <T : MathElement<out Norm<T, R>>, R> norm(arg: T): R = arg.context.norm(arg)

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@ -3,7 +3,6 @@ package scientifik.kmath.structures
import scientifik.kmath.operations.Field import scientifik.kmath.operations.Field
import scientifik.kmath.operations.FieldElement import scientifik.kmath.operations.FieldElement
class BoxingNDField<T, F : Field<T>>( class BoxingNDField<T, F : Field<T>>(
override val shape: IntArray, override val shape: IntArray,
override val elementContext: F, override val elementContext: F,
@ -19,10 +18,10 @@ class BoxingNDField<T, F : Field<T>>(
if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides") if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides")
} }
override val zero by lazy { produce { zero } } override val zero: BufferedNDFieldElement<T, F> by lazy { produce { zero } }
override val one by lazy { produce { one } } override val one: BufferedNDFieldElement<T, F> by lazy { produce { one } }
override fun produce(initializer: F.(IntArray) -> T) = override fun produce(initializer: F.(IntArray) -> T): BufferedNDFieldElement<T, F> =
BufferedNDFieldElement( BufferedNDFieldElement(
this, this,
buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }) buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) })

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@ -18,10 +18,10 @@ class BoxingNDRing<T, R : Ring<T>>(
if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides") if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides")
} }
override val zero by lazy { produce { zero } } override val zero: BufferedNDRingElement<T, R> by lazy { produce { zero } }
override val one by lazy { produce { one } } override val one: BufferedNDRingElement<T, R> by lazy { produce { one } }
override fun produce(initializer: R.(IntArray) -> T) = override fun produce(initializer: R.(IntArray) -> T): BufferedNDRingElement<T, R> =
BufferedNDRingElement( BufferedNDRingElement(
this, this,
buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }) buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) })

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@ -7,16 +7,16 @@ import kotlin.reflect.KClass
*/ */
class BufferAccessor2D<T : Any>(val type: KClass<T>, val rowNum: Int, val colNum: Int) { class BufferAccessor2D<T : Any>(val type: KClass<T>, val rowNum: Int, val colNum: Int) {
operator fun Buffer<T>.get(i: Int, j: Int) = get(i + colNum * j) operator fun Buffer<T>.get(i: Int, j: Int): T = get(i + colNum * j)
operator fun MutableBuffer<T>.set(i: Int, j: Int, value: T) { operator fun MutableBuffer<T>.set(i: Int, j: Int, value: T) {
set(i + colNum * j, value) set(i + colNum * j, value)
} }
inline fun create(init: (i: Int, j: Int) -> T) = inline fun create(init: (i: Int, j: Int) -> T): MutableBuffer<T> =
MutableBuffer.auto(type, rowNum * colNum) { offset -> init(offset / colNum, offset % colNum) } MutableBuffer.auto(type, rowNum * colNum) { offset -> init(offset / colNum, offset % colNum) }
fun create(mat: Structure2D<T>) = create { i, j -> mat[i, j] } fun create(mat: Structure2D<T>): MutableBuffer<T> = create { i, j -> mat[i, j] }
//TODO optimize wrapper //TODO optimize wrapper
fun MutableBuffer<T>.collect(): Structure2D<T> = fun MutableBuffer<T>.collect(): Structure2D<T> =
@ -41,5 +41,5 @@ class BufferAccessor2D<T : Any>(val type: KClass<T>, val rowNum: Int, val colNum
/** /**
* Get row * Get row
*/ */
fun MutableBuffer<T>.row(i: Int) = Row(this, i) fun MutableBuffer<T>.row(i: Int): Row = Row(this, i)
} }

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@ -2,7 +2,7 @@ package scientifik.kmath.structures
import scientifik.kmath.operations.* import scientifik.kmath.operations.*
interface BufferedNDAlgebra<T, C>: NDAlgebra<T, C, NDBuffer<T>>{ interface BufferedNDAlgebra<T, C> : NDAlgebra<T, C, NDBuffer<T>> {
val strides: Strides val strides: Strides
override fun check(vararg elements: NDBuffer<T>) { override fun check(vararg elements: NDBuffer<T>) {
@ -11,7 +11,8 @@ interface BufferedNDAlgebra<T, C>: NDAlgebra<T, C, NDBuffer<T>>{
/** /**
* Convert any [NDStructure] to buffered structure using strides from this context. * Convert any [NDStructure] to buffered structure using strides from this context.
* If the structure is already [NDBuffer], conversion is free. If not, it could be expensive because iteration over indexes * If the structure is already [NDBuffer], conversion is free. If not, it could be expensive because iteration over
* indices.
* *
* If the argument is [NDBuffer] with different strides structure, the new element will be produced. * If the argument is [NDBuffer] with different strides structure, the new element will be produced.
*/ */
@ -30,7 +31,7 @@ interface BufferedNDAlgebra<T, C>: NDAlgebra<T, C, NDBuffer<T>>{
} }
interface BufferedNDSpace<T, S : Space<T>> : NDSpace<T, S, NDBuffer<T>>, BufferedNDAlgebra<T,S> { interface BufferedNDSpace<T, S : Space<T>> : NDSpace<T, S, NDBuffer<T>>, BufferedNDAlgebra<T, S> {
override fun NDBuffer<T>.toElement(): SpaceElement<NDBuffer<T>, *, out BufferedNDSpace<T, S>> override fun NDBuffer<T>.toElement(): SpaceElement<NDBuffer<T>, *, out BufferedNDSpace<T, S>>
} }

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@ -8,7 +8,7 @@ import scientifik.kmath.operations.*
abstract class BufferedNDElement<T, C> : NDBuffer<T>(), NDElement<T, C, NDBuffer<T>> { abstract class BufferedNDElement<T, C> : NDBuffer<T>(), NDElement<T, C, NDBuffer<T>> {
abstract override val context: BufferedNDAlgebra<T, C> abstract override val context: BufferedNDAlgebra<T, C>
override val strides get() = context.strides override val strides: Strides get() = context.strides
override val shape: IntArray get() = context.shape override val shape: IntArray get() = context.shape
} }
@ -54,9 +54,9 @@ class BufferedNDFieldElement<T, F : Field<T>>(
/** /**
* Element by element application of any operation on elements to the whole array. Just like in numpy * Element by element application of any operation on elements to the whole array. Just like in numpy.
*/ */
operator fun <T : Any, F : Field<T>> Function1<T, T>.invoke(ndElement: BufferedNDElement<T, F>) = operator fun <T : Any, F : Field<T>> Function1<T, T>.invoke(ndElement: BufferedNDElement<T, F>): MathElement<out BufferedNDAlgebra<T, F>> =
ndElement.context.run { map(ndElement) { invoke(it) }.toElement() } ndElement.context.run { map(ndElement) { invoke(it) }.toElement() }
/* plus and minus */ /* plus and minus */
@ -64,13 +64,13 @@ operator fun <T : Any, F : Field<T>> Function1<T, T>.invoke(ndElement: BufferedN
/** /**
* Summation operation for [BufferedNDElement] and single element * Summation operation for [BufferedNDElement] and single element
*/ */
operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.plus(arg: T) = operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.plus(arg: T): NDElement<T, F, NDBuffer<T>> =
context.map(this) { it + arg }.wrap() context.map(this) { it + arg }.wrap()
/** /**
* Subtraction operation between [BufferedNDElement] and single element * Subtraction operation between [BufferedNDElement] and single element
*/ */
operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.minus(arg: T) = operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.minus(arg: T): NDElement<T, F, NDBuffer<T>> =
context.map(this) { it - arg }.wrap() context.map(this) { it - arg }.wrap()
/* prod and div */ /* prod and div */
@ -78,11 +78,11 @@ operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.minus(arg: T) =
/** /**
* Product operation for [BufferedNDElement] and single element * Product operation for [BufferedNDElement] and single element
*/ */
operator fun <T : Any, F : Ring<T>> BufferedNDElement<T, F>.times(arg: T) = operator fun <T : Any, F : Ring<T>> BufferedNDElement<T, F>.times(arg: T): NDElement<T, F, NDBuffer<T>> =
context.map(this) { it * arg }.wrap() context.map(this) { it * arg }.wrap()
/** /**
* Division operation between [BufferedNDElement] and single element * Division operation between [BufferedNDElement] and single element
*/ */
operator fun <T : Any, F : Field<T>> BufferedNDElement<T, F>.div(arg: T) = operator fun <T : Any, F : Field<T>> BufferedNDElement<T, F>.div(arg: T): NDElement<T, F, NDBuffer<T>> =
context.map(this) { it / arg }.wrap() context.map(this) { it / arg }.wrap()

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@ -4,39 +4,48 @@ import scientifik.kmath.operations.Complex
import scientifik.kmath.operations.complex import scientifik.kmath.operations.complex
import kotlin.reflect.KClass import kotlin.reflect.KClass
/**
* Function that produces [Buffer] from its size and function that supplies values.
*
* @param T the type of buffer.
*/
typealias BufferFactory<T> = (Int, (Int) -> T) -> Buffer<T> typealias BufferFactory<T> = (Int, (Int) -> T) -> Buffer<T>
typealias MutableBufferFactory<T> = (Int, (Int) -> T) -> MutableBuffer<T>
/** /**
* A generic random access structure for both primitives and objects * Function that produces [MutableBuffer] from its size and function that supplies values.
*
* @param T the type of buffer.
*/
typealias MutableBufferFactory<T> = (Int, (Int) -> T) -> MutableBuffer<T>
/**
* A generic immutable random-access structure for both primitives and objects.
*
* @param T the type of elements contained in the buffer.
*/ */
interface Buffer<T> { interface Buffer<T> {
/** /**
* The size of the buffer * The size of this buffer.
*/ */
val size: Int val size: Int
/** /**
* Get element at given index * Gets element at given index.
*/ */
operator fun get(index: Int): T operator fun get(index: Int): T
/** /**
* Iterate over all elements * Iterates over all elements.
*/ */
operator fun iterator(): Iterator<T> operator fun iterator(): Iterator<T>
/** /**
* Check content eqiality with another buffer * Checks content equality with another buffer.
*/ */
fun contentEquals(other: Buffer<*>): Boolean = fun contentEquals(other: Buffer<*>): Boolean =
asSequence().mapIndexed { index, value -> value == other[index] }.all { it } asSequence().mapIndexed { index, value -> value == other[index] }.all { it }
companion object { companion object {
inline fun real(size: Int, initializer: (Int) -> Double): RealBuffer { inline fun real(size: Int, initializer: (Int) -> Double): RealBuffer {
val array = DoubleArray(size) { initializer(it) } val array = DoubleArray(size) { initializer(it) }
return RealBuffer(array) return RealBuffer(array)
@ -69,17 +78,34 @@ interface Buffer<T> {
} }
} }
/**
* Creates a sequence that returns all elements from this [Buffer].
*/
fun <T> Buffer<T>.asSequence(): Sequence<T> = Sequence(::iterator) fun <T> Buffer<T>.asSequence(): Sequence<T> = Sequence(::iterator)
/**
* Creates an iterable that returns all elements from this [Buffer].
*/
fun <T> Buffer<T>.asIterable(): Iterable<T> = Iterable(::iterator) fun <T> Buffer<T>.asIterable(): Iterable<T> = Iterable(::iterator)
val Buffer<*>.indices: IntRange get() = IntRange(0, size - 1) /**
* Returns an [IntRange] of the valid indices for this [Buffer].
*/
val Buffer<*>.indices: IntRange get() = 0 until size
/**
* A generic mutable random-access structure for both primitives and objects.
*
* @param T the type of elements contained in the buffer.
*/
interface MutableBuffer<T> : Buffer<T> { interface MutableBuffer<T> : Buffer<T> {
/**
* Sets the array element at the specified [index] to the specified [value].
*/
operator fun set(index: Int, value: T) operator fun set(index: Int, value: T)
/** /**
* A shallow copy of the buffer * Returns a shallow copy of the buffer.
*/ */
fun copy(): MutableBuffer<T> fun copy(): MutableBuffer<T>
@ -114,8 +140,13 @@ interface MutableBuffer<T> : Buffer<T> {
} }
} }
/**
* [Buffer] implementation over [List].
*
* @param T the type of elements contained in the buffer.
* @property list The underlying list.
*/
inline class ListBuffer<T>(val list: List<T>) : Buffer<T> { inline class ListBuffer<T>(val list: List<T>) : Buffer<T> {
override val size: Int override val size: Int
get() = list.size get() = list.size
@ -124,11 +155,26 @@ inline class ListBuffer<T>(val list: List<T>) : Buffer<T> {
override fun iterator(): Iterator<T> = list.iterator() override fun iterator(): Iterator<T> = list.iterator()
} }
fun <T> List<T>.asBuffer() = ListBuffer<T>(this) /**
* Returns an [ListBuffer] that wraps the original list.
*/
fun <T> List<T>.asBuffer(): ListBuffer<T> = ListBuffer(this)
@Suppress("FunctionName") /**
inline fun <T> ListBuffer(size: Int, init: (Int) -> T) = List(size, init).asBuffer() * Creates a new [ListBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an array element given its index.
*/
inline fun <T> ListBuffer(size: Int, init: (Int) -> T): ListBuffer<T> = List(size, init).asBuffer()
/**
* [MutableBuffer] implementation over [MutableList].
*
* @param T the type of elements contained in the buffer.
* @property list The underlying list.
*/
inline class MutableListBuffer<T>(val list: MutableList<T>) : MutableBuffer<T> { inline class MutableListBuffer<T>(val list: MutableList<T>) : MutableBuffer<T> {
override val size: Int override val size: Int
@ -144,8 +190,14 @@ inline class MutableListBuffer<T>(val list: MutableList<T>) : MutableBuffer<T> {
override fun copy(): MutableBuffer<T> = MutableListBuffer(ArrayList(list)) override fun copy(): MutableBuffer<T> = MutableListBuffer(ArrayList(list))
} }
/**
* [MutableBuffer] implementation over [Array].
*
* @param T the type of elements contained in the buffer.
* @property array The underlying array.
*/
class ArrayBuffer<T>(private val array: Array<T>) : MutableBuffer<T> { class ArrayBuffer<T>(private val array: Array<T>) : MutableBuffer<T> {
//Can't inline because array is invariant // Can't inline because array is invariant
override val size: Int override val size: Int
get() = array.size get() = array.size
@ -160,19 +212,30 @@ class ArrayBuffer<T>(private val array: Array<T>) : MutableBuffer<T> {
override fun copy(): MutableBuffer<T> = ArrayBuffer(array.copyOf()) override fun copy(): MutableBuffer<T> = ArrayBuffer(array.copyOf())
} }
/**
* Returns an [ArrayBuffer] that wraps the original array.
*/
fun <T> Array<T>.asBuffer(): ArrayBuffer<T> = ArrayBuffer(this) fun <T> Array<T>.asBuffer(): ArrayBuffer<T> = ArrayBuffer(this)
/**
* Immutable wrapper for [MutableBuffer].
*
* @param T the type of elements contained in the buffer.
* @property buffer The underlying buffer.
*/
inline class ReadOnlyBuffer<T>(val buffer: MutableBuffer<T>) : Buffer<T> { inline class ReadOnlyBuffer<T>(val buffer: MutableBuffer<T>) : Buffer<T> {
override val size: Int get() = buffer.size override val size: Int get() = buffer.size
override fun get(index: Int): T = buffer.get(index) override fun get(index: Int): T = buffer[index]
override fun iterator() = buffer.iterator() override fun iterator(): Iterator<T> = buffer.iterator()
} }
/** /**
* A buffer with content calculated on-demand. The calculated contect is not stored, so it is recalculated on each call. * A buffer with content calculated on-demand. The calculated content is not stored, so it is recalculated on each call.
* Useful when one needs single element from the buffer. * Useful when one needs single element from the buffer.
*
* @param T the type of elements provided by the buffer.
*/ */
class VirtualBuffer<T>(override val size: Int, private val generator: (Int) -> T) : Buffer<T> { class VirtualBuffer<T>(override val size: Int, private val generator: (Int) -> T) : Buffer<T> {
override fun get(index: Int): T { override fun get(index: Int): T {
@ -192,17 +255,16 @@ class VirtualBuffer<T>(override val size: Int, private val generator: (Int) -> T
} }
/** /**
* Convert this buffer to read-only buffer * Convert this buffer to read-only buffer.
*/ */
fun <T> Buffer<T>.asReadOnly(): Buffer<T> = if (this is MutableBuffer) { fun <T> Buffer<T>.asReadOnly(): Buffer<T> = if (this is MutableBuffer) ReadOnlyBuffer(this) else this
ReadOnlyBuffer(this)
} else {
this
}
/** /**
* Typealias for buffer transformations * Typealias for buffer transformations.
*/ */
typealias BufferTransform<T, R> = (Buffer<T>) -> Buffer<R> typealias BufferTransform<T, R> = (Buffer<T>) -> Buffer<R>
/**
* Typealias for buffer transformations with suspend function.
*/
typealias SuspendBufferTransform<T, R> = suspend (Buffer<T>) -> Buffer<R> typealias SuspendBufferTransform<T, R> = suspend (Buffer<T>) -> Buffer<R>

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@ -17,8 +17,8 @@ class ComplexNDField(override val shape: IntArray) :
override val strides: Strides = DefaultStrides(shape) override val strides: Strides = DefaultStrides(shape)
override val elementContext: ComplexField get() = ComplexField override val elementContext: ComplexField get() = ComplexField
override val zero by lazy { produce { zero } } override val zero: ComplexNDElement by lazy { produce { zero } }
override val one by lazy { produce { one } } override val one: ComplexNDElement by lazy { produce { one } }
inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Complex): Buffer<Complex> = inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Complex): Buffer<Complex> =
Buffer.complex(size) { initializer(it) } Buffer.complex(size) { initializer(it) }
@ -69,23 +69,23 @@ class ComplexNDField(override val shape: IntArray) :
override fun NDBuffer<Complex>.toElement(): FieldElement<NDBuffer<Complex>, *, out BufferedNDField<Complex, ComplexField>> = override fun NDBuffer<Complex>.toElement(): FieldElement<NDBuffer<Complex>, *, out BufferedNDField<Complex, ComplexField>> =
BufferedNDFieldElement(this@ComplexNDField, buffer) BufferedNDFieldElement(this@ComplexNDField, buffer)
override fun power(arg: NDBuffer<Complex>, pow: Number) = map(arg) { power(it, pow) } override fun power(arg: NDBuffer<Complex>, pow: Number): ComplexNDElement = map(arg) { power(it, pow) }
override fun exp(arg: NDBuffer<Complex>) = map(arg) { exp(it) } override fun exp(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { exp(it) }
override fun ln(arg: NDBuffer<Complex>) = map(arg) { ln(it) } override fun ln(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { ln(it) }
override fun sin(arg: NDBuffer<Complex>) = map(arg) { sin(it) } override fun sin(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { sin(it) }
override fun cos(arg: NDBuffer<Complex>) = map(arg) { cos(it) } override fun cos(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { cos(it) }
override fun tan(arg: NDBuffer<Complex>): NDBuffer<Complex> = map(arg) { tan(it) } override fun tan(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { tan(it) }
override fun asin(arg: NDBuffer<Complex>): NDBuffer<Complex> = map(arg) { asin(it) } override fun asin(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { asin(it) }
override fun acos(arg: NDBuffer<Complex>): NDBuffer<Complex> = map(arg) {acos(it)} override fun acos(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { acos(it) }
override fun atan(arg: NDBuffer<Complex>): NDBuffer<Complex> = map(arg) {atan(it)} override fun atan(arg: NDBuffer<Complex>): ComplexNDElement = map(arg) { atan(it) }
} }
@ -98,13 +98,13 @@ inline fun BufferedNDField<Complex, ComplexField>.produceInline(crossinline init
} }
/** /**
* Map one [ComplexNDElement] using function with indexes * Map one [ComplexNDElement] using function with indices.
*/ */
inline fun ComplexNDElement.mapIndexed(crossinline transform: ComplexField.(index: IntArray, Complex) -> Complex) = inline fun ComplexNDElement.mapIndexed(crossinline transform: ComplexField.(index: IntArray, Complex) -> Complex): ComplexNDElement =
context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) } context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) }
/** /**
* Map one [ComplexNDElement] using function without indexes * Map one [ComplexNDElement] using function without indices.
*/ */
inline fun ComplexNDElement.map(crossinline transform: ComplexField.(Complex) -> Complex): ComplexNDElement { inline fun ComplexNDElement.map(crossinline transform: ComplexField.(Complex) -> Complex): ComplexNDElement {
val buffer = Buffer.complex(strides.linearSize) { offset -> ComplexField.transform(buffer[offset]) } val buffer = Buffer.complex(strides.linearSize) { offset -> ComplexField.transform(buffer[offset]) }
@ -114,7 +114,7 @@ inline fun ComplexNDElement.map(crossinline transform: ComplexField.(Complex) ->
/** /**
* Element by element application of any operation on elements to the whole array. Just like in numpy * Element by element application of any operation on elements to the whole array. Just like in numpy
*/ */
operator fun Function1<Complex, Complex>.invoke(ndElement: ComplexNDElement) = operator fun Function1<Complex, Complex>.invoke(ndElement: ComplexNDElement): ComplexNDElement =
ndElement.map { this@invoke(it) } ndElement.map { this@invoke(it) }
@ -123,19 +123,18 @@ operator fun Function1<Complex, Complex>.invoke(ndElement: ComplexNDElement) =
/** /**
* Summation operation for [BufferedNDElement] and single element * Summation operation for [BufferedNDElement] and single element
*/ */
operator fun ComplexNDElement.plus(arg: Complex) = operator fun ComplexNDElement.plus(arg: Complex): ComplexNDElement = map { it + arg }
map { it + arg }
/** /**
* Subtraction operation between [BufferedNDElement] and single element * Subtraction operation between [BufferedNDElement] and single element
*/ */
operator fun ComplexNDElement.minus(arg: Complex) = operator fun ComplexNDElement.minus(arg: Complex): ComplexNDElement =
map { it - arg } map { it - arg }
operator fun ComplexNDElement.plus(arg: Double) = operator fun ComplexNDElement.plus(arg: Double): ComplexNDElement =
map { it + arg } map { it + arg }
operator fun ComplexNDElement.minus(arg: Double) = operator fun ComplexNDElement.minus(arg: Double): ComplexNDElement =
map { it - arg } map { it - arg }
fun NDField.Companion.complex(vararg shape: Int): ComplexNDField = ComplexNDField(shape) fun NDField.Companion.complex(vararg shape: Int): ComplexNDField = ComplexNDField(shape)

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@ -2,9 +2,15 @@ package scientifik.kmath.structures
import scientifik.kmath.operations.ExtendedField import scientifik.kmath.operations.ExtendedField
/**
* [ExtendedField] over [NDStructure].
*
* @param T the type of the element contained in ND structure.
* @param N the type of ND structure.
* @param F the extended field of structure elements.
*/
interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<T>> : NDField<T, F, N>, ExtendedField<N> interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<T>> : NDField<T, F, N>, ExtendedField<N>
///** ///**
// * NDField that supports [ExtendedField] operations on its elements // * NDField that supports [ExtendedField] operations on its elements
// */ // */
@ -36,5 +42,3 @@ interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<T>> : N
// return produce { with(elementContext) { cos(arg[it]) } } // return produce { with(elementContext) { cos(arg[it]) } }
// } // }
//} //}

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@ -2,15 +2,35 @@ package scientifik.kmath.structures
import kotlin.experimental.and import kotlin.experimental.and
/**
* Represents flags to supply additional info about values of buffer.
*
* @property mask bit mask value of this flag.
*/
enum class ValueFlag(val mask: Byte) { enum class ValueFlag(val mask: Byte) {
/**
* Reports the value is NaN.
*/
NAN(0b0000_0001), NAN(0b0000_0001),
/**
* Reports the value doesn't present in the buffer (when the type of value doesn't support `null`).
*/
MISSING(0b0000_0010), MISSING(0b0000_0010),
/**
* Reports the value is negative infinity.
*/
NEGATIVE_INFINITY(0b0000_0100), NEGATIVE_INFINITY(0b0000_0100),
/**
* Reports the value is positive infinity
*/
POSITIVE_INFINITY(0b0000_1000) POSITIVE_INFINITY(0b0000_1000)
} }
/** /**
* A buffer with flagged values * A buffer with flagged values.
*/ */
interface FlaggedBuffer<T> : Buffer<T> { interface FlaggedBuffer<T> : Buffer<T> {
fun getFlag(index: Int): Byte fun getFlag(index: Int): Byte
@ -19,11 +39,11 @@ interface FlaggedBuffer<T> : Buffer<T> {
/** /**
* The value is valid if all flags are down * The value is valid if all flags are down
*/ */
fun FlaggedBuffer<*>.isValid(index: Int) = getFlag(index) != 0.toByte() fun FlaggedBuffer<*>.isValid(index: Int): Boolean = getFlag(index) != 0.toByte()
fun FlaggedBuffer<*>.hasFlag(index: Int, flag: ValueFlag) = (getFlag(index) and flag.mask) != 0.toByte() fun FlaggedBuffer<*>.hasFlag(index: Int, flag: ValueFlag): Boolean = (getFlag(index) and flag.mask) != 0.toByte()
fun FlaggedBuffer<*>.isMissing(index: Int) = hasFlag(index, ValueFlag.MISSING) fun FlaggedBuffer<*>.isMissing(index: Int): Boolean = hasFlag(index, ValueFlag.MISSING)
/** /**
* A real buffer which supports flags for each value like NaN or Missing * A real buffer which supports flags for each value like NaN or Missing
@ -45,8 +65,8 @@ class FlaggedRealBuffer(val values: DoubleArray, val flags: ByteArray) : Flagged
} }
inline fun FlaggedRealBuffer.forEachValid(block: (Double) -> Unit) { inline fun FlaggedRealBuffer.forEachValid(block: (Double) -> Unit) {
for(i in indices){ for (i in indices) {
if(isValid(i)){ if (isValid(i)) {
block(values[i]) block(values[i])
} }
} }

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@ -0,0 +1,49 @@
package scientifik.kmath.structures
/**
* Specialized [MutableBuffer] implementation over [FloatArray].
*
* @property array the underlying array.
*/
inline class FloatBuffer(val array: FloatArray) : MutableBuffer<Float> {
override val size: Int get() = array.size
override fun get(index: Int): Float = array[index]
override fun set(index: Int, value: Float) {
array[index] = value
}
override fun iterator(): FloatIterator = array.iterator()
override fun copy(): MutableBuffer<Float> =
FloatBuffer(array.copyOf())
}
/**
* Creates a new [FloatBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an buffer element given its index.
*/
inline fun FloatBuffer(size: Int, init: (Int) -> Float): FloatBuffer = FloatBuffer(FloatArray(size) { init(it) })
/**
* Returns a new [FloatBuffer] of given elements.
*/
fun FloatBuffer(vararg floats: Float): FloatBuffer = FloatBuffer(floats)
/**
* Returns a [FloatArray] containing all of the elements of this [MutableBuffer].
*/
val MutableBuffer<out Float>.array: FloatArray
get() = (if (this is FloatBuffer) array else FloatArray(size) { get(it) })
/**
* Returns [FloatBuffer] over this array.
*
* @receiver the array.
* @return the new buffer.
*/
fun FloatArray.asBuffer(): FloatBuffer = FloatBuffer(this)

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@ -1,5 +1,10 @@
package scientifik.kmath.structures package scientifik.kmath.structures
/**
* Specialized [MutableBuffer] implementation over [IntArray].
*
* @property array the underlying array.
*/
inline class IntBuffer(val array: IntArray) : MutableBuffer<Int> { inline class IntBuffer(val array: IntArray) : MutableBuffer<Int> {
override val size: Int get() = array.size override val size: Int get() = array.size
@ -9,12 +14,37 @@ inline class IntBuffer(val array: IntArray) : MutableBuffer<Int> {
array[index] = value array[index] = value
} }
override fun iterator() = array.iterator() override fun iterator(): IntIterator = array.iterator()
override fun copy(): MutableBuffer<Int> = override fun copy(): MutableBuffer<Int> =
IntBuffer(array.copyOf()) IntBuffer(array.copyOf())
} }
/**
* Creates a new [IntBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an buffer element given its index.
*/
inline fun IntBuffer(size: Int, init: (Int) -> Int): IntBuffer = IntBuffer(IntArray(size) { init(it) })
fun IntArray.asBuffer() = IntBuffer(this) /**
* Returns a new [IntBuffer] of given elements.
*/
fun IntBuffer(vararg ints: Int): IntBuffer = IntBuffer(ints)
/**
* Returns a [IntArray] containing all of the elements of this [MutableBuffer].
*/
val MutableBuffer<out Int>.array: IntArray
get() = (if (this is IntBuffer) array else IntArray(size) { get(it) })
/**
* Returns [IntBuffer] over this array.
*
* @receiver the array.
* @return the new buffer.
*/
fun IntArray.asBuffer(): IntBuffer = IntBuffer(this)

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@ -1,5 +1,10 @@
package scientifik.kmath.structures package scientifik.kmath.structures
/**
* Specialized [MutableBuffer] implementation over [LongArray].
*
* @property array the underlying array.
*/
inline class LongBuffer(val array: LongArray) : MutableBuffer<Long> { inline class LongBuffer(val array: LongArray) : MutableBuffer<Long> {
override val size: Int get() = array.size override val size: Int get() = array.size
@ -9,11 +14,37 @@ inline class LongBuffer(val array: LongArray) : MutableBuffer<Long> {
array[index] = value array[index] = value
} }
override fun iterator() = array.iterator() override fun iterator(): LongIterator = array.iterator()
override fun copy(): MutableBuffer<Long> = override fun copy(): MutableBuffer<Long> =
LongBuffer(array.copyOf()) LongBuffer(array.copyOf())
} }
fun LongArray.asBuffer() = LongBuffer(this) /**
* Creates a new [LongBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an buffer element given its index.
*/
inline fun LongBuffer(size: Int, init: (Int) -> Long): LongBuffer = LongBuffer(LongArray(size) { init(it) })
/**
* Returns a new [LongBuffer] of given elements.
*/
fun LongBuffer(vararg longs: Long): LongBuffer = LongBuffer(longs)
/**
* Returns a [IntArray] containing all of the elements of this [MutableBuffer].
*/
val MutableBuffer<out Long>.array: LongArray
get() = (if (this is LongBuffer) array else LongArray(size) { get(it) })
/**
* Returns [LongBuffer] over this array.
*
* @receiver the array.
* @return the new buffer.
*/
fun LongArray.asBuffer(): LongBuffer = LongBuffer(this)

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@ -3,13 +3,16 @@ package scientifik.kmath.structures
import scientifik.memory.* import scientifik.memory.*
/** /**
* A non-boxing buffer based on [ByteBuffer] storage * A non-boxing buffer over [Memory] object.
*
* @param T the type of elements contained in the buffer.
* @property memory the underlying memory segment.
* @property spec the spec of [T] type.
*/ */
open class MemoryBuffer<T : Any>(protected val memory: Memory, protected val spec: MemorySpec<T>) : Buffer<T> { open class MemoryBuffer<T : Any>(protected val memory: Memory, protected val spec: MemorySpec<T>) : Buffer<T> {
override val size: Int get() = memory.size / spec.objectSize override val size: Int get() = memory.size / spec.objectSize
private val reader = memory.reader() private val reader: MemoryReader = memory.reader()
override fun get(index: Int): T = reader.read(spec, spec.objectSize * index) override fun get(index: Int): T = reader.read(spec, spec.objectSize * index)
@ -17,7 +20,7 @@ open class MemoryBuffer<T : Any>(protected val memory: Memory, protected val spe
companion object { companion object {
fun <T : Any> create(spec: MemorySpec<T>, size: Int) = fun <T : Any> create(spec: MemorySpec<T>, size: Int): MemoryBuffer<T> =
MemoryBuffer(Memory.allocate(size * spec.objectSize), spec) MemoryBuffer(Memory.allocate(size * spec.objectSize), spec)
inline fun <T : Any> create( inline fun <T : Any> create(
@ -33,24 +36,31 @@ open class MemoryBuffer<T : Any>(protected val memory: Memory, protected val spe
} }
} }
/**
* A mutable non-boxing buffer over [Memory] object.
*
* @param T the type of elements contained in the buffer.
* @property memory the underlying memory segment.
* @property spec the spec of [T] type.
*/
class MutableMemoryBuffer<T : Any>(memory: Memory, spec: MemorySpec<T>) : MemoryBuffer<T>(memory, spec), class MutableMemoryBuffer<T : Any>(memory: Memory, spec: MemorySpec<T>) : MemoryBuffer<T>(memory, spec),
MutableBuffer<T> { MutableBuffer<T> {
private val writer = memory.writer() private val writer: MemoryWriter = memory.writer()
override fun set(index: Int, value: T) = writer.write(spec, spec.objectSize * index, value) override fun set(index: Int, value: T): Unit = writer.write(spec, spec.objectSize * index, value)
override fun copy(): MutableBuffer<T> = MutableMemoryBuffer(memory.copy(), spec) override fun copy(): MutableBuffer<T> = MutableMemoryBuffer(memory.copy(), spec)
companion object { companion object {
fun <T : Any> create(spec: MemorySpec<T>, size: Int) = fun <T : Any> create(spec: MemorySpec<T>, size: Int): MutableMemoryBuffer<T> =
MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec) MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec)
inline fun <T : Any> create( inline fun <T : Any> create(
spec: MemorySpec<T>, spec: MemorySpec<T>,
size: Int, size: Int,
crossinline initializer: (Int) -> T crossinline initializer: (Int) -> T
) = ): MutableMemoryBuffer<T> =
MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer -> MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer ->
(0 until size).forEach { (0 until size).forEach {
buffer[it] = initializer(it) buffer[it] = initializer(it)

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@ -56,7 +56,7 @@ interface NDAlgebra<T, C, N : NDStructure<T>> {
/** /**
* element-by-element invoke a function working on [T] on a [NDStructure] * element-by-element invoke a function working on [T] on a [NDStructure]
*/ */
operator fun Function1<T, T>.invoke(structure: N) = map(structure) { value -> this@invoke(value) } operator fun Function1<T, T>.invoke(structure: N): N = map(structure) { value -> this@invoke(value) }
companion object companion object
} }
@ -76,12 +76,12 @@ interface NDSpace<T, S : Space<T>, N : NDStructure<T>> : Space<N>, NDAlgebra<T,
override fun multiply(a: N, k: Number): N = map(a) { multiply(it, k) } override fun multiply(a: N, k: Number): N = map(a) { multiply(it, k) }
//TODO move to extensions after KEEP-176 //TODO move to extensions after KEEP-176
operator fun N.plus(arg: T) = map(this) { value -> add(arg, value) } operator fun N.plus(arg: T): N = map(this) { value -> add(arg, value) }
operator fun N.minus(arg: T) = map(this) { value -> add(arg, -value) } operator fun N.minus(arg: T): N = map(this) { value -> add(arg, -value) }
operator fun T.plus(arg: N) = map(arg) { value -> add(this@plus, value) } operator fun T.plus(arg: N): N = map(arg) { value -> add(this@plus, value) }
operator fun T.minus(arg: N) = map(arg) { value -> add(-this@minus, value) } operator fun T.minus(arg: N): N = map(arg) { value -> add(-this@minus, value) }
companion object companion object
} }
@ -97,20 +97,19 @@ interface NDRing<T, R : Ring<T>, N : NDStructure<T>> : Ring<N>, NDSpace<T, R, N>
override fun multiply(a: N, b: N): N = combine(a, b) { aValue, bValue -> multiply(aValue, bValue) } override fun multiply(a: N, b: N): N = combine(a, b) { aValue, bValue -> multiply(aValue, bValue) }
//TODO move to extensions after KEEP-176 //TODO move to extensions after KEEP-176
operator fun N.times(arg: T) = map(this) { value -> multiply(arg, value) } operator fun N.times(arg: T): N = map(this) { value -> multiply(arg, value) }
operator fun T.times(arg: N) = map(arg) { value -> multiply(this@times, value) } operator fun T.times(arg: N): N = map(arg) { value -> multiply(this@times, value) }
companion object companion object
} }
/** /**
* Field for n-dimensional structures. * Field of [NDStructure].
* @param shape - the list of dimensions of the array *
* @param elementField - operations field defined on individual array element * @param T the type of the element contained in ND structure.
* @param T - the type of the element contained in ND structure * @param N the type of ND structure.
* @param F - field of structure elements * @param F field of structure elements.
* @param R - actual nd-element type of this field
*/ */
interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F, N> { interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F, N> {
@ -120,9 +119,9 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F,
override fun divide(a: N, b: N): N = combine(a, b) { aValue, bValue -> divide(aValue, bValue) } override fun divide(a: N, b: N): N = combine(a, b) { aValue, bValue -> divide(aValue, bValue) }
//TODO move to extensions after KEEP-176 //TODO move to extensions after KEEP-176
operator fun N.div(arg: T) = map(this) { value -> divide(arg, value) } operator fun N.div(arg: T): N = map(this) { value -> divide(arg, value) }
operator fun T.div(arg: N) = map(arg) { divide(it, this@div) } operator fun T.div(arg: N): N = map(arg) { divide(it, this@div) }
companion object { companion object {
@ -131,7 +130,7 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F,
/** /**
* Create a nd-field for [Double] values or pull it from cache if it was created previously * Create a nd-field for [Double] values or pull it from cache if it was created previously
*/ */
fun real(vararg shape: Int) = realNDFieldCache.getOrPut(shape) { RealNDField(shape) } fun real(vararg shape: Int): RealNDField = realNDFieldCache.getOrPut(shape) { RealNDField(shape) }
/** /**
* Create a nd-field with boxing generic buffer * Create a nd-field with boxing generic buffer
@ -140,7 +139,7 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F,
field: F, field: F,
vararg shape: Int, vararg shape: Int,
bufferFactory: BufferFactory<T> = Buffer.Companion::boxing bufferFactory: BufferFactory<T> = Buffer.Companion::boxing
) = BoxingNDField(shape, field, bufferFactory) ): BoxingNDField<T, F> = BoxingNDField(shape, field, bufferFactory)
/** /**
* Create a most suitable implementation for nd-field using reified class. * Create a most suitable implementation for nd-field using reified class.

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@ -23,19 +23,23 @@ interface NDElement<T, C, N : NDStructure<T>> : NDStructure<T> {
/** /**
* Create a optimized NDArray of doubles * Create a optimized NDArray of doubles
*/ */
fun real(shape: IntArray, initializer: RealField.(IntArray) -> Double = { 0.0 }) = fun real(shape: IntArray, initializer: RealField.(IntArray) -> Double = { 0.0 }): RealNDElement =
NDField.real(*shape).produce(initializer) NDField.real(*shape).produce(initializer)
fun real1D(dim: Int, initializer: (Int) -> Double = { _ -> 0.0 }) = fun real1D(dim: Int, initializer: (Int) -> Double = { _ -> 0.0 }): RealNDElement =
real(intArrayOf(dim)) { initializer(it[0]) } real(intArrayOf(dim)) { initializer(it[0]) }
fun real2D(dim1: Int, dim2: Int, initializer: (Int, Int) -> Double = { _, _ -> 0.0 }) = fun real2D(dim1: Int, dim2: Int, initializer: (Int, Int) -> Double = { _, _ -> 0.0 }): RealNDElement =
real(intArrayOf(dim1, dim2)) { initializer(it[0], it[1]) } real(intArrayOf(dim1, dim2)) { initializer(it[0], it[1]) }
fun real3D(dim1: Int, dim2: Int, dim3: Int, initializer: (Int, Int, Int) -> Double = { _, _, _ -> 0.0 }) = fun real3D(
real(intArrayOf(dim1, dim2, dim3)) { initializer(it[0], it[1], it[2]) } dim1: Int,
dim2: Int,
dim3: Int,
initializer: (Int, Int, Int) -> Double = { _, _, _ -> 0.0 }
): RealNDElement = real(intArrayOf(dim1, dim2, dim3)) { initializer(it[0], it[1], it[2]) }
/** /**
@ -62,16 +66,17 @@ interface NDElement<T, C, N : NDStructure<T>> : NDStructure<T> {
} }
fun <T, C, N : NDStructure<T>> NDElement<T, C, N>.mapIndexed(transform: C.(index: IntArray, T) -> T) = fun <T, C, N : NDStructure<T>> NDElement<T, C, N>.mapIndexed(transform: C.(index: IntArray, T) -> T): NDElement<T, C, N> =
context.mapIndexed(unwrap(), transform).wrap() context.mapIndexed(unwrap(), transform).wrap()
fun <T, C, N : NDStructure<T>> NDElement<T, C, N>.map(transform: C.(T) -> T) = context.map(unwrap(), transform).wrap() fun <T, C, N : NDStructure<T>> NDElement<T, C, N>.map(transform: C.(T) -> T): NDElement<T, C, N> =
context.map(unwrap(), transform).wrap()
/** /**
* Element by element application of any operation on elements to the whole [NDElement] * Element by element application of any operation on elements to the whole [NDElement]
*/ */
operator fun <T, C, N : NDStructure<T>> Function1<T, T>.invoke(ndElement: NDElement<T, C, N>) = operator fun <T, C, N : NDStructure<T>> Function1<T, T>.invoke(ndElement: NDElement<T, C, N>): NDElement<T, C, N> =
ndElement.map { value -> this@invoke(value) } ndElement.map { value -> this@invoke(value) }
/* plus and minus */ /* plus and minus */
@ -79,13 +84,13 @@ operator fun <T, C, N : NDStructure<T>> Function1<T, T>.invoke(ndElement: NDElem
/** /**
* Summation operation for [NDElement] and single element * Summation operation for [NDElement] and single element
*/ */
operator fun <T, S : Space<T>, N : NDStructure<T>> NDElement<T, S, N>.plus(arg: T) = operator fun <T, S : Space<T>, N : NDStructure<T>> NDElement<T, S, N>.plus(arg: T): NDElement<T, S, N> =
map { value -> arg + value } map { value -> arg + value }
/** /**
* Subtraction operation between [NDElement] and single element * Subtraction operation between [NDElement] and single element
*/ */
operator fun <T, S : Space<T>, N : NDStructure<T>> NDElement<T, S, N>.minus(arg: T) = operator fun <T, S : Space<T>, N : NDStructure<T>> NDElement<T, S, N>.minus(arg: T): NDElement<T, S, N> =
map { value -> arg - value } map { value -> arg - value }
/* prod and div */ /* prod and div */
@ -93,13 +98,13 @@ operator fun <T, S : Space<T>, N : NDStructure<T>> NDElement<T, S, N>.minus(arg:
/** /**
* Product operation for [NDElement] and single element * Product operation for [NDElement] and single element
*/ */
operator fun <T, R : Ring<T>, N : NDStructure<T>> NDElement<T, R, N>.times(arg: T) = operator fun <T, R : Ring<T>, N : NDStructure<T>> NDElement<T, R, N>.times(arg: T): NDElement<T, R, N> =
map { value -> arg * value } map { value -> arg * value }
/** /**
* Division operation between [NDElement] and single element * Division operation between [NDElement] and single element
*/ */
operator fun <T, F : Field<T>, N : NDStructure<T>> NDElement<T, F, N>.div(arg: T) = operator fun <T, F : Field<T>, N : NDStructure<T>> NDElement<T, F, N>.div(arg: T): NDElement<T, F, N> =
map { value -> arg / value } map { value -> arg / value }

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@ -3,15 +3,38 @@ package scientifik.kmath.structures
import kotlin.jvm.JvmName import kotlin.jvm.JvmName
import kotlin.reflect.KClass import kotlin.reflect.KClass
/**
* Represents n-dimensional structure, i.e. multidimensional container of items of the same type and size. The number
* of dimensions and items in an array is defined by its shape, which is a sequence of non-negative integers that
* specify the sizes of each dimension.
*
* @param T the type of items.
*/
interface NDStructure<T> { interface NDStructure<T> {
/**
* The shape of structure, i.e. non-empty sequence of non-negative integers that specify sizes of dimensions of
* this structure.
*/
val shape: IntArray val shape: IntArray
val dimension get() = shape.size /**
* The count of dimensions in this structure. It should be equal to size of [shape].
*/
val dimension: Int get() = shape.size
/**
* Returns the value at the specified indices.
*
* @param index the indices.
* @return the value.
*/
operator fun get(index: IntArray): T operator fun get(index: IntArray): T
/**
* Returns the sequence of all the elements associated by their indices.
*
* @return the lazy sequence of pairs of indices to values.
*/
fun elements(): Sequence<Pair<IntArray, T>> fun elements(): Sequence<Pair<IntArray, T>>
override fun equals(other: Any?): Boolean override fun equals(other: Any?): Boolean
@ -19,6 +42,9 @@ interface NDStructure<T> {
override fun hashCode(): Int override fun hashCode(): Int
companion object { companion object {
/**
* Indicates whether some [NDStructure] is equal to another one.
*/
fun equals(st1: NDStructure<*>, st2: NDStructure<*>): Boolean { fun equals(st1: NDStructure<*>, st2: NDStructure<*>): Boolean {
if (st1 === st2) return true if (st1 === st2) return true
@ -36,47 +62,79 @@ interface NDStructure<T> {
} }
/** /**
* Create a NDStructure with explicit buffer factory * Creates a NDStructure with explicit buffer factory.
* *
* Strides should be reused if possible * Strides should be reused if possible.
*/ */
fun <T> build( fun <T> build(
strides: Strides, strides: Strides,
bufferFactory: BufferFactory<T> = Buffer.Companion::boxing, bufferFactory: BufferFactory<T> = Buffer.Companion::boxing,
initializer: (IntArray) -> T initializer: (IntArray) -> T
) = ): BufferNDStructure<T> =
BufferNDStructure(strides, bufferFactory(strides.linearSize) { i -> initializer(strides.index(i)) }) BufferNDStructure(strides, bufferFactory(strides.linearSize) { i -> initializer(strides.index(i)) })
/** /**
* Inline create NDStructure with non-boxing buffer implementation if it is possible * Inline create NDStructure with non-boxing buffer implementation if it is possible
*/ */
inline fun <reified T : Any> auto(strides: Strides, crossinline initializer: (IntArray) -> T) = inline fun <reified T : Any> auto(
strides: Strides,
crossinline initializer: (IntArray) -> T
): BufferNDStructure<T> =
BufferNDStructure(strides, Buffer.auto(strides.linearSize) { i -> initializer(strides.index(i)) }) BufferNDStructure(strides, Buffer.auto(strides.linearSize) { i -> initializer(strides.index(i)) })
inline fun <T : Any> auto(type: KClass<T>, strides: Strides, crossinline initializer: (IntArray) -> T) = inline fun <T : Any> auto(
type: KClass<T>,
strides: Strides,
crossinline initializer: (IntArray) -> T
): BufferNDStructure<T> =
BufferNDStructure(strides, Buffer.auto(type, strides.linearSize) { i -> initializer(strides.index(i)) }) BufferNDStructure(strides, Buffer.auto(type, strides.linearSize) { i -> initializer(strides.index(i)) })
fun <T> build( fun <T> build(
shape: IntArray, shape: IntArray,
bufferFactory: BufferFactory<T> = Buffer.Companion::boxing, bufferFactory: BufferFactory<T> = Buffer.Companion::boxing,
initializer: (IntArray) -> T initializer: (IntArray) -> T
) = build(DefaultStrides(shape), bufferFactory, initializer) ): BufferNDStructure<T> = build(DefaultStrides(shape), bufferFactory, initializer)
inline fun <reified T : Any> auto(shape: IntArray, crossinline initializer: (IntArray) -> T) = inline fun <reified T : Any> auto(
shape: IntArray,
crossinline initializer: (IntArray) -> T
): BufferNDStructure<T> =
auto(DefaultStrides(shape), initializer) auto(DefaultStrides(shape), initializer)
@JvmName("autoVarArg") @JvmName("autoVarArg")
inline fun <reified T : Any> auto(vararg shape: Int, crossinline initializer: (IntArray) -> T) = inline fun <reified T : Any> auto(
vararg shape: Int,
crossinline initializer: (IntArray) -> T
): BufferNDStructure<T> =
auto(DefaultStrides(shape), initializer) auto(DefaultStrides(shape), initializer)
inline fun <T : Any> auto(type: KClass<T>, vararg shape: Int, crossinline initializer: (IntArray) -> T) = inline fun <T : Any> auto(
type: KClass<T>,
vararg shape: Int,
crossinline initializer: (IntArray) -> T
): BufferNDStructure<T> =
auto(type, DefaultStrides(shape), initializer) auto(type, DefaultStrides(shape), initializer)
} }
} }
/**
* Returns the value at the specified indices.
*
* @param index the indices.
* @return the value.
*/
operator fun <T> NDStructure<T>.get(vararg index: Int): T = get(index) operator fun <T> NDStructure<T>.get(vararg index: Int): T = get(index)
/**
* Represents mutable [NDStructure].
*/
interface MutableNDStructure<T> : NDStructure<T> { interface MutableNDStructure<T> : NDStructure<T> {
/**
* Inserts an item at the specified indices.
*
* @param index the indices.
* @param value the value.
*/
operator fun set(index: IntArray, value: T) operator fun set(index: IntArray, value: T)
} }
@ -87,7 +145,7 @@ inline fun <T> MutableNDStructure<T>.mapInPlace(action: (IntArray, T) -> T) {
} }
/** /**
* A way to convert ND index to linear one and back * A way to convert ND index to linear one and back.
*/ */
interface Strides { interface Strides {
/** /**
@ -124,11 +182,14 @@ interface Strides {
} }
} }
/**
* Simple implementation of [Strides].
*/
class DefaultStrides private constructor(override val shape: IntArray) : Strides { class DefaultStrides private constructor(override val shape: IntArray) : Strides {
/** /**
* Strides for memory access * Strides for memory access
*/ */
override val strides by lazy { override val strides: List<Int> by lazy {
sequence { sequence {
var current = 1 var current = 1
yield(1) yield(1)
@ -163,19 +224,14 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides
override val linearSize: Int override val linearSize: Int
get() = strides[shape.size] get() = strides[shape.size]
override fun equals(other: Any?): Boolean { override fun equals(other: Any?): Boolean {
if (this === other) return true if (this === other) return true
if (other !is DefaultStrides) return false if (other !is DefaultStrides) return false
if (!shape.contentEquals(other.shape)) return false if (!shape.contentEquals(other.shape)) return false
return true return true
} }
override fun hashCode(): Int { override fun hashCode(): Int = shape.contentHashCode()
return shape.contentHashCode()
}
companion object { companion object {
private val defaultStridesCache = HashMap<IntArray, Strides>() private val defaultStridesCache = HashMap<IntArray, Strides>()
@ -187,8 +243,20 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides
} }
} }
/**
* Represents [NDStructure] over [Buffer].
*
* @param T the type of items.
*/
abstract class NDBuffer<T> : NDStructure<T> { abstract class NDBuffer<T> : NDStructure<T> {
/**
* The underlying buffer.
*/
abstract val buffer: Buffer<T> abstract val buffer: Buffer<T>
/**
* The strides to access elements of [Buffer] by linear indices.
*/
abstract val strides: Strides abstract val strides: Strides
override fun get(index: IntArray): T = buffer[strides.offset(index)] override fun get(index: IntArray): T = buffer[strides.offset(index)]
@ -238,7 +306,7 @@ inline fun <T, reified R : Any> NDStructure<T>.mapToBuffer(
} }
/** /**
* Mutable ND buffer based on linear [autoBuffer] * Mutable ND buffer based on linear [MutableBuffer].
*/ */
class MutableBufferNDStructure<T>( class MutableBufferNDStructure<T>(
override val strides: Strides, override val strides: Strides,
@ -246,12 +314,12 @@ class MutableBufferNDStructure<T>(
) : NDBuffer<T>(), MutableNDStructure<T> { ) : NDBuffer<T>(), MutableNDStructure<T> {
init { init {
if (strides.linearSize != buffer.size) { require(strides.linearSize == buffer.size) {
error("Expected buffer side of ${strides.linearSize}, but found ${buffer.size}") "Expected buffer side of ${strides.linearSize}, but found ${buffer.size}"
} }
} }
override fun set(index: IntArray, value: T) = buffer.set(strides.offset(index), value) override fun set(index: IntArray, value: T): Unit = buffer.set(strides.offset(index), value)
} }
inline fun <reified T : Any> NDStructure<T>.combine( inline fun <reified T : Any> NDStructure<T>.combine(

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@ -1,5 +1,10 @@
package scientifik.kmath.structures package scientifik.kmath.structures
/**
* Specialized [MutableBuffer] implementation over [DoubleArray].
*
* @property array the underlying array.
*/
inline class RealBuffer(val array: DoubleArray) : MutableBuffer<Double> { inline class RealBuffer(val array: DoubleArray) : MutableBuffer<Double> {
override val size: Int get() = array.size override val size: Int get() = array.size
@ -9,26 +14,36 @@ inline class RealBuffer(val array: DoubleArray) : MutableBuffer<Double> {
array[index] = value array[index] = value
} }
override fun iterator() = array.iterator() override fun iterator(): DoubleIterator = array.iterator()
override fun copy(): MutableBuffer<Double> = override fun copy(): MutableBuffer<Double> =
RealBuffer(array.copyOf()) RealBuffer(array.copyOf())
} }
@Suppress("FunctionName") /**
* Creates a new [RealBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an buffer element given its index.
*/
inline fun RealBuffer(size: Int, init: (Int) -> Double): RealBuffer = RealBuffer(DoubleArray(size) { init(it) }) inline fun RealBuffer(size: Int, init: (Int) -> Double): RealBuffer = RealBuffer(DoubleArray(size) { init(it) })
@Suppress("FunctionName") /**
* Returns a new [RealBuffer] of given elements.
*/
fun RealBuffer(vararg doubles: Double): RealBuffer = RealBuffer(doubles) fun RealBuffer(vararg doubles: Double): RealBuffer = RealBuffer(doubles)
/** /**
* Transform buffer of doubles into array for high performance operations * Returns a [DoubleArray] containing all of the elements of this [MutableBuffer].
*/ */
val MutableBuffer<out Double>.array: DoubleArray val MutableBuffer<out Double>.array: DoubleArray
get() = if (this is RealBuffer) { get() = (if (this is RealBuffer) array else DoubleArray(size) { get(it) })
array
} else {
DoubleArray(size) { get(it) }
}
fun DoubleArray.asBuffer() = RealBuffer(this) /**
* Returns [RealBuffer] over this array.
*
* @receiver the array.
* @return the new buffer.
*/
fun DoubleArray.asBuffer(): RealBuffer = RealBuffer(this)

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@ -6,7 +6,7 @@ import kotlin.math.*
/** /**
* A simple field over linear buffers of [Double] * [ExtendedFieldOperations] over [RealBuffer].
*/ */
object RealBufferFieldOperations : ExtendedFieldOperations<Buffer<Double>> { object RealBufferFieldOperations : ExtendedFieldOperations<Buffer<Double>> {
override fun add(a: Buffer<Double>, b: Buffer<Double>): RealBuffer { override fun add(a: Buffer<Double>, b: Buffer<Double>): RealBuffer {
@ -109,6 +109,11 @@ object RealBufferFieldOperations : ExtendedFieldOperations<Buffer<Double>> {
RealBuffer(DoubleArray(arg.size) { ln(arg[it]) }) RealBuffer(DoubleArray(arg.size) { ln(arg[it]) })
} }
/**
* [ExtendedField] over [RealBuffer].
*
* @property size the size of buffers to operate on.
*/
class RealBufferField(val size: Int) : ExtendedField<Buffer<Double>> { class RealBufferField(val size: Int) : ExtendedField<Buffer<Double>> {
override val zero: Buffer<Double> by lazy { RealBuffer(size) { 0.0 } } override val zero: Buffer<Double> by lazy { RealBuffer(size) { 0.0 } }
override val one: Buffer<Double> by lazy { RealBuffer(size) { 1.0 } } override val one: Buffer<Double> by lazy { RealBuffer(size) { 1.0 } }

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@ -12,8 +12,8 @@ class RealNDField(override val shape: IntArray) :
override val strides: Strides = DefaultStrides(shape) override val strides: Strides = DefaultStrides(shape)
override val elementContext: RealField get() = RealField override val elementContext: RealField get() = RealField
override val zero by lazy { produce { zero } } override val zero: RealNDElement by lazy { produce { zero } }
override val one by lazy { produce { one } } override val one: RealNDElement by lazy { produce { one } }
inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Double): Buffer<Double> = inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Double): Buffer<Double> =
RealBuffer(DoubleArray(size) { initializer(it) }) RealBuffer(DoubleArray(size) { initializer(it) })
@ -64,15 +64,15 @@ class RealNDField(override val shape: IntArray) :
override fun NDBuffer<Double>.toElement(): FieldElement<NDBuffer<Double>, *, out BufferedNDField<Double, RealField>> = override fun NDBuffer<Double>.toElement(): FieldElement<NDBuffer<Double>, *, out BufferedNDField<Double, RealField>> =
BufferedNDFieldElement(this@RealNDField, buffer) BufferedNDFieldElement(this@RealNDField, buffer)
override fun power(arg: NDBuffer<Double>, pow: Number) = map(arg) { power(it, pow) } override fun power(arg: NDBuffer<Double>, pow: Number): RealNDElement = map(arg) { power(it, pow) }
override fun exp(arg: NDBuffer<Double>) = map(arg) { exp(it) } override fun exp(arg: NDBuffer<Double>): RealNDElement = map(arg) { exp(it) }
override fun ln(arg: NDBuffer<Double>) = map(arg) { ln(it) } override fun ln(arg: NDBuffer<Double>): RealNDElement = map(arg) { ln(it) }
override fun sin(arg: NDBuffer<Double>) = map(arg) { sin(it) } override fun sin(arg: NDBuffer<Double>): RealNDElement = map(arg) { sin(it) }
override fun cos(arg: NDBuffer<Double>) = map(arg) { cos(it) } override fun cos(arg: NDBuffer<Double>): RealNDElement = map(arg) { cos(it) }
override fun tan(arg: NDBuffer<Double>): NDBuffer<Double> = map(arg) { tan(it) } override fun tan(arg: NDBuffer<Double>): NDBuffer<Double> = map(arg) { tan(it) }
@ -93,13 +93,13 @@ inline fun BufferedNDField<Double, RealField>.produceInline(crossinline initiali
} }
/** /**
* Map one [RealNDElement] using function with indexes * Map one [RealNDElement] using function with indices.
*/ */
inline fun RealNDElement.mapIndexed(crossinline transform: RealField.(index: IntArray, Double) -> Double) = inline fun RealNDElement.mapIndexed(crossinline transform: RealField.(index: IntArray, Double) -> Double): RealNDElement =
context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) } context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) }
/** /**
* Map one [RealNDElement] using function without indexes * Map one [RealNDElement] using function without indices.
*/ */
inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> Double): RealNDElement { inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> Double): RealNDElement {
val array = DoubleArray(strides.linearSize) { offset -> RealField.transform(buffer[offset]) } val array = DoubleArray(strides.linearSize) { offset -> RealField.transform(buffer[offset]) }
@ -107,9 +107,9 @@ inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> Double
} }
/** /**
* Element by element application of any operation on elements to the whole array. Just like in numpy * Element by element application of any operation on elements to the whole array. Just like in numpy.
*/ */
operator fun Function1<Double, Double>.invoke(ndElement: RealNDElement) = operator fun Function1<Double, Double>.invoke(ndElement: RealNDElement): RealNDElement =
ndElement.map { this@invoke(it) } ndElement.map { this@invoke(it) }
@ -118,13 +118,13 @@ operator fun Function1<Double, Double>.invoke(ndElement: RealNDElement) =
/** /**
* Summation operation for [BufferedNDElement] and single element * Summation operation for [BufferedNDElement] and single element
*/ */
operator fun RealNDElement.plus(arg: Double) = operator fun RealNDElement.plus(arg: Double): RealNDElement =
map { it + arg } map { it + arg }
/** /**
* Subtraction operation between [BufferedNDElement] and single element * Subtraction operation between [BufferedNDElement] and single element
*/ */
operator fun RealNDElement.minus(arg: Double) = operator fun RealNDElement.minus(arg: Double): RealNDElement =
map { it - arg } map { it - arg }
/** /**

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@ -1,5 +1,10 @@
package scientifik.kmath.structures package scientifik.kmath.structures
/**
* Specialized [MutableBuffer] implementation over [ShortBuffer].
*
* @property array the underlying array.
*/
inline class ShortBuffer(val array: ShortArray) : MutableBuffer<Short> { inline class ShortBuffer(val array: ShortArray) : MutableBuffer<Short> {
override val size: Int get() = array.size override val size: Int get() = array.size
@ -9,12 +14,37 @@ inline class ShortBuffer(val array: ShortArray) : MutableBuffer<Short> {
array[index] = value array[index] = value
} }
override fun iterator() = array.iterator() override fun iterator(): ShortIterator = array.iterator()
override fun copy(): MutableBuffer<Short> = override fun copy(): MutableBuffer<Short> =
ShortBuffer(array.copyOf()) ShortBuffer(array.copyOf())
} }
/**
* Creates a new [ShortBuffer] with the specified [size], where each element is calculated by calling the specified
* [init] function.
*
* The function [init] is called for each array element sequentially starting from the first one.
* It should return the value for an buffer element given its index.
*/
inline fun ShortBuffer(size: Int, init: (Int) -> Short): ShortBuffer = ShortBuffer(ShortArray(size) { init(it) })
fun ShortArray.asBuffer() = ShortBuffer(this) /**
* Returns a new [ShortBuffer] of given elements.
*/
fun ShortBuffer(vararg shorts: Short): ShortBuffer = ShortBuffer(shorts)
/**
* Returns a [ShortArray] containing all of the elements of this [MutableBuffer].
*/
val MutableBuffer<out Short>.array: ShortArray
get() = (if (this is ShortBuffer) array else ShortArray(size) { get(it) })
/**
* Returns [ShortBuffer] over this array.
*
* @receiver the array.
* @return the new buffer.
*/
fun ShortArray.asBuffer(): ShortBuffer = ShortBuffer(this)

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@ -12,8 +12,8 @@ class ShortNDRing(override val shape: IntArray) :
override val strides: Strides = DefaultStrides(shape) override val strides: Strides = DefaultStrides(shape)
override val elementContext: ShortRing get() = ShortRing override val elementContext: ShortRing get() = ShortRing
override val zero by lazy { produce { ShortRing.zero } } override val zero: ShortNDElement by lazy { produce { zero } }
override val one by lazy { produce { ShortRing.one } } override val one: ShortNDElement by lazy { produce { one } }
inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer<Short> = inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer<Short> =
ShortBuffer(ShortArray(size) { initializer(it) }) ShortBuffer(ShortArray(size) { initializer(it) })
@ -40,6 +40,7 @@ class ShortNDRing(override val shape: IntArray) :
transform: ShortRing.(index: IntArray, Short) -> Short transform: ShortRing.(index: IntArray, Short) -> Short
): ShortNDElement { ): ShortNDElement {
check(arg) check(arg)
return BufferedNDRingElement( return BufferedNDRingElement(
this, this,
buildBuffer(arg.strides.linearSize) { offset -> buildBuffer(arg.strides.linearSize) { offset ->
@ -67,7 +68,7 @@ class ShortNDRing(override val shape: IntArray) :
/** /**
* Fast element production using function inlining * Fast element production using function inlining.
*/ */
inline fun BufferedNDRing<Short, ShortRing>.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement { inline fun BufferedNDRing<Short, ShortRing>.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement {
val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) } val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) }
@ -75,22 +76,22 @@ inline fun BufferedNDRing<Short, ShortRing>.produceInline(crossinline initialize
} }
/** /**
* Element by element application of any operation on elements to the whole array. Just like in numpy * Element by element application of any operation on elements to the whole array.
*/ */
operator fun Function1<Short, Short>.invoke(ndElement: ShortNDElement) = operator fun Function1<Short, Short>.invoke(ndElement: ShortNDElement): ShortNDElement =
ndElement.context.produceInline { i -> invoke(ndElement.buffer[i]) } ndElement.context.produceInline { i -> invoke(ndElement.buffer[i]) }
/* plus and minus */ /* plus and minus */
/** /**
* Summation operation for [StridedNDFieldElement] and single element * Summation operation for [ShortNDElement] and single element.
*/ */
operator fun ShortNDElement.plus(arg: Short) = operator fun ShortNDElement.plus(arg: Short): ShortNDElement =
context.produceInline { i -> (buffer[i] + arg).toShort() } context.produceInline { i -> (buffer[i] + arg).toShort() }
/** /**
* Subtraction operation between [StridedNDFieldElement] and single element * Subtraction operation between [ShortNDElement] and single element.
*/ */
operator fun ShortNDElement.minus(arg: Short) = operator fun ShortNDElement.minus(arg: Short): ShortNDElement =
context.produceInline { i -> (buffer[i] - arg).toShort() } context.produceInline { i -> (buffer[i] - arg).toShort() }

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@ -17,7 +17,7 @@ interface Structure1D<T> : NDStructure<T>, Buffer<T> {
/** /**
* A 1D wrapper for nd-structure * A 1D wrapper for nd-structure
*/ */
private inline class Structure1DWrapper<T>(val structure: NDStructure<T>) : Structure1D<T>{ private inline class Structure1DWrapper<T>(val structure: NDStructure<T>) : Structure1D<T> {
override val shape: IntArray get() = structure.shape override val shape: IntArray get() = structure.shape
override val size: Int get() = structure.shape[0] override val size: Int get() = structure.shape[0]
@ -39,14 +39,14 @@ private inline class Buffer1DWrapper<T>(val buffer: Buffer<T>) : Structure1D<T>
override fun elements(): Sequence<Pair<IntArray, T>> = override fun elements(): Sequence<Pair<IntArray, T>> =
asSequence().mapIndexed { index, value -> intArrayOf(index) to value } asSequence().mapIndexed { index, value -> intArrayOf(index) to value }
override fun get(index: Int): T = buffer.get(index) override fun get(index: Int): T = buffer[index]
} }
/** /**
* Represent a [NDStructure] as [Structure1D]. Throw error in case of dimension mismatch * Represent a [NDStructure] as [Structure1D]. Throw error in case of dimension mismatch
*/ */
fun <T> NDStructure<T>.as1D(): Structure1D<T> = if (shape.size == 1) { fun <T> NDStructure<T>.as1D(): Structure1D<T> = if (shape.size == 1) {
if( this is NDBuffer){ if (this is NDBuffer) {
Buffer1DWrapper(this.buffer) Buffer1DWrapper(this.buffer)
} else { } else {
Structure1DWrapper(this) Structure1DWrapper(this)

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@ -32,9 +32,7 @@ interface Structure2D<T> : NDStructure<T> {
} }
} }
companion object { companion object
}
} }
/** /**

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@ -31,7 +31,7 @@ class ExpressionFieldTest {
@Test @Test
fun separateContext() { fun separateContext() {
fun <T> FunctionalExpressionField<T,*>.expression(): Expression<T> { fun <T> FunctionalExpressionField<T, *>.expression(): Expression<T> {
val x = variable("x") val x = variable("x")
return x * x + 2 * x + one return x * x + 2 * x + one
} }
@ -42,7 +42,7 @@ class ExpressionFieldTest {
@Test @Test
fun valueExpression() { fun valueExpression() {
val expressionBuilder: FunctionalExpressionField<Double,*>.() -> Expression<Double> = { val expressionBuilder: FunctionalExpressionField<Double, *>.() -> Expression<Double> = {
val x = variable("x") val x = variable("x")
x * x + 2 * x + one x * x + 2 * x + one
} }

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@ -49,17 +49,17 @@ class MatrixTest {
@Test @Test
fun test2DDot() { fun test2DDot() {
val firstMatrix = NDStructure.auto(2,3){ (i, j) -> (i + j).toDouble() }.as2D() val firstMatrix = NDStructure.auto(2, 3) { (i, j) -> (i + j).toDouble() }.as2D()
val secondMatrix = NDStructure.auto(3,2){ (i, j) -> (i + j).toDouble() }.as2D() val secondMatrix = NDStructure.auto(3, 2) { (i, j) -> (i + j).toDouble() }.as2D()
MatrixContext.real.run { MatrixContext.real.run {
// val firstMatrix = produce(2, 3) { i, j -> (i + j).toDouble() } // val firstMatrix = produce(2, 3) { i, j -> (i + j).toDouble() }
// val secondMatrix = produce(3, 2) { i, j -> (i + j).toDouble() } // val secondMatrix = produce(3, 2) { i, j -> (i + j).toDouble() }
val result = firstMatrix dot secondMatrix val result = firstMatrix dot secondMatrix
assertEquals(2, result.rowNum) assertEquals(2, result.rowNum)
assertEquals(2, result.colNum) assertEquals(2, result.colNum)
assertEquals(8.0, result[0,1]) assertEquals(8.0, result[0, 1])
assertEquals(8.0, result[1,0]) assertEquals(8.0, result[1, 0])
assertEquals(14.0, result[1,1]) assertEquals(14.0, result[1, 1])
} }
} }
} }

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@ -8,10 +8,10 @@ import kotlin.test.assertEquals
import kotlin.test.assertTrue import kotlin.test.assertTrue
class AutoDiffTest { class AutoDiffTest {
fun Variable(int: Int): Variable<Double> = Variable(int.toDouble())
fun Variable(int: Int) = Variable(int.toDouble()) fun deriv(body: AutoDiffField<Double, RealField>.() -> Variable<Double>): DerivationResult<Double> =
RealField.deriv(body)
fun deriv(body: AutoDiffField<Double, RealField>.() -> Variable<Double>) = RealField.deriv(body)
@Test @Test
fun testPlusX2() { fun testPlusX2() {
@ -178,5 +178,4 @@ class AutoDiffTest {
private fun assertApprox(a: Double, b: Double) { private fun assertApprox(a: Double, b: Double) {
if ((a - b) > 1e-10) assertEquals(a, b) if ((a - b) > 1e-10) assertEquals(a, b)
} }
} }

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@ -47,4 +47,3 @@ class BigIntAlgebraTest {
} }
} }

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@ -19,7 +19,7 @@ class BigIntConstructorTest {
@Test @Test
fun testConstructor_0xffffffffaL() { fun testConstructor_0xffffffffaL() {
val x = -0xffffffffaL.toBigInt() val x = (-0xffffffffaL).toBigInt()
val y = uintArrayOf(0xfffffffaU, 0xfU).toBigInt(-1) val y = uintArrayOf(0xfffffffaU, 0xfU).toBigInt(-1)
assertEquals(x, y) assertEquals(x, y)
} }

View File

@ -19,7 +19,7 @@ class BigIntConversionsTest {
@Test @Test
fun testToString_0x17ead2ffffd() { fun testToString_0x17ead2ffffd() {
val x = -0x17ead2ffffdL.toBigInt() val x = (-0x17ead2ffffdL).toBigInt()
assertEquals("-0x17ead2ffffd", x.toString()) assertEquals("-0x17ead2ffffd", x.toString())
} }

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@ -31,7 +31,7 @@ class BigIntOperationsTest {
@Test @Test
fun testUnaryMinus() { fun testUnaryMinus() {
val x = 1234.toBigInt() val x = 1234.toBigInt()
val y = -1234.toBigInt() val y = (-1234).toBigInt()
assertEquals(-x, y) assertEquals(-x, y)
} }
@ -48,18 +48,18 @@ class BigIntOperationsTest {
@Test @Test
fun testMinus__2_1() { fun testMinus__2_1() {
val x = -2.toBigInt() val x = (-2).toBigInt()
val y = 1.toBigInt() val y = 1.toBigInt()
val res = x - y val res = x - y
val sum = -3.toBigInt() val sum = (-3).toBigInt()
assertEquals(sum, res) assertEquals(sum, res)
} }
@Test @Test
fun testMinus___2_1() { fun testMinus___2_1() {
val x = -2.toBigInt() val x = (-2).toBigInt()
val y = 1.toBigInt() val y = 1.toBigInt()
val res = -x - y val res = -x - y
@ -74,7 +74,7 @@ class BigIntOperationsTest {
val y = 0xffffffffaL.toBigInt() val y = 0xffffffffaL.toBigInt()
val res = x - y val res = x - y
val sum = -0xfffffcfc1L.toBigInt() val sum = (-0xfffffcfc1L).toBigInt()
assertEquals(sum, res) assertEquals(sum, res)
} }
@ -92,11 +92,11 @@ class BigIntOperationsTest {
@Test @Test
fun testMultiply__2_3() { fun testMultiply__2_3() {
val x = -2.toBigInt() val x = (-2).toBigInt()
val y = 3.toBigInt() val y = 3.toBigInt()
val res = x * y val res = x * y
val prod = -6.toBigInt() val prod = (-6).toBigInt()
assertEquals(prod, res) assertEquals(prod, res)
} }
@ -129,7 +129,7 @@ class BigIntOperationsTest {
val y = -0xfff456 val y = -0xfff456
val res = x * y val res = x * y
val prod = -0xffe579ad5dc2L.toBigInt() val prod = (-0xffe579ad5dc2L).toBigInt()
assertEquals(prod, res) assertEquals(prod, res)
} }
@ -259,7 +259,7 @@ class BigIntOperationsTest {
val y = -3 val y = -3
val res = x / y val res = x / y
val div = -6.toBigInt() val div = (-6).toBigInt()
assertEquals(div, res) assertEquals(div, res)
} }
@ -267,10 +267,10 @@ class BigIntOperationsTest {
@Test @Test
fun testBigDivision_20__3() { fun testBigDivision_20__3() {
val x = 20.toBigInt() val x = 20.toBigInt()
val y = -3.toBigInt() val y = (-3).toBigInt()
val res = x / y val res = x / y
val div = -6.toBigInt() val div = (-6).toBigInt()
assertEquals(div, res) assertEquals(div, res)
} }

View File

@ -8,8 +8,8 @@ import kotlin.test.Test
import kotlin.test.assertEquals import kotlin.test.assertEquals
class NumberNDFieldTest { class NumberNDFieldTest {
val array1 = real2D(3, 3) { i, j -> (i + j).toDouble() } val array1: RealNDElement = real2D(3, 3) { i, j -> (i + j).toDouble() }
val array2 = real2D(3, 3) { i, j -> (i - j).toDouble() } val array2: RealNDElement = real2D(3, 3) { i, j -> (i - j).toDouble() }
@Test @Test
fun testSum() { fun testSum() {

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@ -5,7 +5,7 @@ import java.math.BigInteger
import java.math.MathContext import java.math.MathContext
/** /**
* A field wrapper for Java [BigInteger] * A field over [BigInteger].
*/ */
object JBigIntegerField : Field<BigInteger> { object JBigIntegerField : Field<BigInteger> {
override val zero: BigInteger override val zero: BigInteger
@ -24,7 +24,9 @@ object JBigIntegerField : Field<BigInteger> {
} }
/** /**
* A Field wrapper for Java [BigDecimal] * An abstract field over [BigDecimal].
*
* @property mathContext the [MathContext] to use.
*/ */
abstract class JBigDecimalFieldBase internal constructor(val mathContext: MathContext = MathContext.DECIMAL64) : abstract class JBigDecimalFieldBase internal constructor(val mathContext: MathContext = MathContext.DECIMAL64) :
Field<BigDecimal>, Field<BigDecimal>,
@ -50,6 +52,9 @@ abstract class JBigDecimalFieldBase internal constructor(val mathContext: MathCo
} }
/**
* A field over [BigDecimal].
*/
class JBigDecimalField(mathContext: MathContext = MathContext.DECIMAL64) : JBigDecimalFieldBase(mathContext) { class JBigDecimalField(mathContext: MathContext = MathContext.DECIMAL64) : JBigDecimalFieldBase(mathContext) {
companion object : JBigDecimalFieldBase() companion object : JBigDecimalFieldBase()
} }

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@ -22,12 +22,11 @@ import kotlinx.coroutines.flow.FlowCollector
import kotlinx.coroutines.sync.Mutex import kotlinx.coroutines.sync.Mutex
import kotlinx.coroutines.sync.withLock import kotlinx.coroutines.sync.withLock
/** /**
* A not-necessary-Markov chain of some type * A not-necessary-Markov chain of some type
* @param R - the chain element type * @param R - the chain element type
*/ */
interface Chain<out R>: Flow<R> { interface Chain<out R> : Flow<R> {
/** /**
* Generate next value, changing state if needed * Generate next value, changing state if needed
*/ */
@ -41,7 +40,7 @@ interface Chain<out R>: Flow<R> {
@OptIn(InternalCoroutinesApi::class) @OptIn(InternalCoroutinesApi::class)
override suspend fun collect(collector: FlowCollector<R>) { override suspend fun collect(collector: FlowCollector<R>) {
kotlinx.coroutines.flow.flow { kotlinx.coroutines.flow.flow {
while (true){ while (true) {
emit(next()) emit(next())
} }
}.collect(collector) }.collect(collector)
@ -71,7 +70,7 @@ class MarkovChain<out R : Any>(private val seed: suspend () -> R, private val ge
private var value: R? = null private var value: R? = null
fun value() = value fun value(): R? = value
override suspend fun next(): R { override suspend fun next(): R {
mutex.withLock { mutex.withLock {
@ -97,12 +96,11 @@ class StatefulChain<S, out R>(
private val forkState: ((S) -> S), private val forkState: ((S) -> S),
private val gen: suspend S.(R) -> R private val gen: suspend S.(R) -> R
) : Chain<R> { ) : Chain<R> {
private val mutex: Mutex = Mutex()
private val mutex = Mutex()
private var value: R? = null private var value: R? = null
fun value() = value fun value(): R? = value
override suspend fun next(): R { override suspend fun next(): R {
mutex.withLock { mutex.withLock {
@ -112,9 +110,7 @@ class StatefulChain<S, out R>(
} }
} }
override fun fork(): Chain<R> { override fun fork(): Chain<R> = StatefulChain(forkState(state), seed, forkState, gen)
return StatefulChain(forkState(state), seed, forkState, gen)
}
} }
/** /**
@ -163,7 +159,8 @@ fun <T, R> Chain<T>.collect(mapper: suspend (Chain<T>) -> R): Chain<R> = object
fun <T, S, R> Chain<T>.collectWithState(state: S, stateFork: (S) -> S, mapper: suspend S.(Chain<T>) -> R): Chain<R> = fun <T, S, R> Chain<T>.collectWithState(state: S, stateFork: (S) -> S, mapper: suspend S.(Chain<T>) -> R): Chain<R> =
object : Chain<R> { object : Chain<R> {
override suspend fun next(): R = state.mapper(this@collectWithState) override suspend fun next(): R = state.mapper(this@collectWithState)
override fun fork(): Chain<R> = this@collectWithState.fork().collectWithState(stateFork(state), stateFork, mapper) override fun fork(): Chain<R> =
this@collectWithState.fork().collectWithState(stateFork(state), stateFork, mapper)
} }
/** /**

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@ -4,7 +4,8 @@ import kotlinx.coroutines.*
import kotlinx.coroutines.channels.produce import kotlinx.coroutines.channels.produce
import kotlinx.coroutines.flow.* import kotlinx.coroutines.flow.*
val Dispatchers.Math: CoroutineDispatcher get() = Dispatchers.Default val Dispatchers.Math: CoroutineDispatcher
get() = Default
/** /**
* An imitator of [Deferred] which holds a suspended function block and dispatcher * An imitator of [Deferred] which holds a suspended function block and dispatcher
@ -42,7 +43,7 @@ fun <T, R> Flow<T>.async(
} }
@FlowPreview @FlowPreview
fun <T, R> AsyncFlow<T>.map(action: (T) -> R) = fun <T, R> AsyncFlow<T>.map(action: (T) -> R): AsyncFlow<R> =
AsyncFlow(deferredFlow.map { input -> AsyncFlow(deferredFlow.map { input ->
//TODO add function composition //TODO add function composition
LazyDeferred(input.dispatcher) { LazyDeferred(input.dispatcher) {
@ -82,9 +83,9 @@ suspend fun <T> AsyncFlow<T>.collect(concurrency: Int, collector: FlowCollector<
@ExperimentalCoroutinesApi @ExperimentalCoroutinesApi
@FlowPreview @FlowPreview
suspend fun <T> AsyncFlow<T>.collect(concurrency: Int, action: suspend (value: T) -> Unit): Unit { suspend fun <T> AsyncFlow<T>.collect(concurrency: Int, action: suspend (value: T) -> Unit) {
collect(concurrency, object : FlowCollector<T> { collect(concurrency, object : FlowCollector<T> {
override suspend fun emit(value: T) = action(value) override suspend fun emit(value: T): Unit = action(value)
}) })
} }
@ -94,9 +95,7 @@ fun <T, R> Flow<T>.mapParallel(
dispatcher: CoroutineDispatcher = Dispatchers.Default, dispatcher: CoroutineDispatcher = Dispatchers.Default,
transform: suspend (T) -> R transform: suspend (T) -> R
): Flow<R> { ): Flow<R> {
return flatMapMerge{ value -> return flatMapMerge { value ->
flow { emit(transform(value)) } flow { emit(transform(value)) }
}.flowOn(dispatcher) }.flowOn(dispatcher)
} }

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@ -11,7 +11,7 @@ import scientifik.kmath.structures.asBuffer
/** /**
* Create a [Flow] from buffer * Create a [Flow] from buffer
*/ */
fun <T> Buffer<T>.asFlow() = iterator().asFlow() fun <T> Buffer<T>.asFlow(): Flow<T> = iterator().asFlow()
/** /**
* Flat map a [Flow] of [Buffer] into continuous [Flow] of elements * Flat map a [Flow] of [Buffer] into continuous [Flow] of elements

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@ -5,19 +5,17 @@ import kotlinx.coroutines.sync.withLock
import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.Buffer
import scientifik.kmath.structures.MutableBuffer import scientifik.kmath.structures.MutableBuffer
import scientifik.kmath.structures.VirtualBuffer import scientifik.kmath.structures.VirtualBuffer
import kotlin.reflect.KClass
/** /**
* Thread-safe ring buffer * Thread-safe ring buffer
*/ */
@Suppress("UNCHECKED_CAST") @Suppress("UNCHECKED_CAST")
internal class RingBuffer<T>( class RingBuffer<T>(
private val buffer: MutableBuffer<T?>, private val buffer: MutableBuffer<T?>,
private var startIndex: Int = 0, private var startIndex: Int = 0,
size: Int = 0 size: Int = 0
) : Buffer<T> { ) : Buffer<T> {
private val mutex: Mutex = Mutex()
private val mutex = Mutex()
override var size: Int = size override var size: Int = size
private set private set
@ -28,7 +26,7 @@ internal class RingBuffer<T>(
return buffer[startIndex.forward(index)] as T return buffer[startIndex.forward(index)] as T
} }
fun isFull() = size == buffer.size fun isFull(): Boolean = size == buffer.size
/** /**
* Iterator could provide wrong results if buffer is changed in initialization (iteration is safe) * Iterator could provide wrong results if buffer is changed in initialization (iteration is safe)

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@ -6,7 +6,7 @@ import kotlin.sequences.Sequence
/** /**
* Represent a chain as regular iterator (uses blocking calls) * Represent a chain as regular iterator (uses blocking calls)
*/ */
operator fun <R> Chain<R>.iterator() = object : Iterator<R> { operator fun <R> Chain<R>.iterator(): Iterator<R> = object : Iterator<R> {
override fun hasNext(): Boolean = true override fun hasNext(): Boolean = true
override fun next(): R = runBlocking { next() } override fun next(): R = runBlocking { next() }

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@ -8,10 +8,9 @@ class LazyNDStructure<T>(
override val shape: IntArray, override val shape: IntArray,
val function: suspend (IntArray) -> T val function: suspend (IntArray) -> T
) : NDStructure<T> { ) : NDStructure<T> {
private val cache: MutableMap<IntArray, Deferred<T>> = hashMapOf()
private val cache = HashMap<IntArray, Deferred<T>>() fun deferred(index: IntArray): Deferred<T> = cache.getOrPut(index) {
fun deferred(index: IntArray) = cache.getOrPut(index) {
scope.async(context = Dispatchers.Math) { scope.async(context = Dispatchers.Math) {
function(index) function(index)
} }
@ -42,21 +41,21 @@ class LazyNDStructure<T>(
result = 31 * result + cache.hashCode() result = 31 * result + cache.hashCode()
return result return result
} }
} }
fun <T> NDStructure<T>.deferred(index: IntArray) = fun <T> NDStructure<T>.deferred(index: IntArray): Deferred<T> =
if (this is LazyNDStructure<T>) this.deferred(index) else CompletableDeferred(get(index)) if (this is LazyNDStructure<T>) this.deferred(index) else CompletableDeferred(get(index))
suspend fun <T> NDStructure<T>.await(index: IntArray) = suspend fun <T> NDStructure<T>.await(index: IntArray): T =
if (this is LazyNDStructure<T>) this.await(index) else get(index) if (this is LazyNDStructure<T>) this.await(index) else get(index)
/** /**
* PENDING would benifit from KEEP-176 * PENDING would benefit from KEEP-176
*/ */
fun <T, R> NDStructure<T>.mapAsyncIndexed(scope: CoroutineScope, function: suspend (T, index: IntArray) -> R) = fun <T, R> NDStructure<T>.mapAsyncIndexed(
LazyNDStructure(scope, shape) { index -> function(get(index), index) } scope: CoroutineScope,
function: suspend (T, index: IntArray) -> R
): LazyNDStructure<R> = LazyNDStructure(scope, shape) { index -> function(get(index), index) }
fun <T, R> NDStructure<T>.mapAsync(scope: CoroutineScope, function: suspend (T) -> R) = fun <T, R> NDStructure<T>.mapAsync(scope: CoroutineScope, function: suspend (T) -> R): LazyNDStructure<R> =
LazyNDStructure(scope, shape) { index -> function(get(index)) } LazyNDStructure(scope, shape) { index -> function(get(index)) }

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@ -15,14 +15,13 @@ import kotlin.test.Test
@InternalCoroutinesApi @InternalCoroutinesApi
@FlowPreview @FlowPreview
class BufferFlowTest { class BufferFlowTest {
val dispatcher: CoroutineDispatcher = Executors.newFixedThreadPool(4).asCoroutineDispatcher()
val dispatcher = Executors.newFixedThreadPool(4).asCoroutineDispatcher()
@Test @Test
@Timeout(2000) @Timeout(2000)
fun map() { fun map() {
runBlocking { runBlocking {
(1..20).asFlow().mapParallel( dispatcher) { (1..20).asFlow().mapParallel(dispatcher) {
println("Started $it on ${Thread.currentThread().name}") println("Started $it on ${Thread.currentThread().name}")
@Suppress("BlockingMethodInNonBlockingContext") @Suppress("BlockingMethodInNonBlockingContext")
Thread.sleep(200) Thread.sleep(200)

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@ -19,17 +19,17 @@ class RingBufferTest {
} }
@Test @Test
fun windowed(){ fun windowed() {
val flow = flow{ val flow = flow {
var i = 0 var i = 0
while(true){ while (true) emit(i++)
emit(i++)
}
} }
val windowed = flow.windowed(10) val windowed = flow.windowed(10)
runBlocking { runBlocking {
val first = windowed.take(1).single() val first = windowed.take(1).single()
val res = windowed.take(15).map { it -> it.asSequence().average() }.toList() val res = windowed.take(15).map { it.asSequence().average() }.toList()
assertEquals(0.0, res[0]) assertEquals(0.0, res[0])
assertEquals(4.5, res[9]) assertEquals(4.5, res[9])
assertEquals(9.5, res[14]) assertEquals(9.5, res[14])

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@ -1,77 +1,148 @@
package scientifik.memory package scientifik.memory
/**
* Represents a display of certain memory structure.
*/
interface Memory { interface Memory {
/**
* The length of this memory in bytes.
*/
val size: Int val size: Int
/** /**
* Get a projection of this memory (it reflects the changes in the parent memory block) * Get a projection of this memory (it reflects the changes in the parent memory block).
*/ */
fun view(offset: Int, length: Int): Memory fun view(offset: Int, length: Int): Memory
/** /**
* Create a copy of this memory, which does not know anything about this memory * Creates an independent copy of this memory.
*/ */
fun copy(): Memory fun copy(): Memory
/** /**
* Create and possibly register a new reader * Gets or creates a reader of this memory.
*/ */
fun reader(): MemoryReader fun reader(): MemoryReader
/**
* Gets or creates a writer of this memory.
*/
fun writer(): MemoryWriter fun writer(): MemoryWriter
companion object { companion object
}
} }
/**
* The interface to read primitive types in this memory.
*/
interface MemoryReader { interface MemoryReader {
/**
* The underlying memory.
*/
val memory: Memory val memory: Memory
/**
* Reads [Double] at certain [offset].
*/
fun readDouble(offset: Int): Double fun readDouble(offset: Int): Double
/**
* Reads [Float] at certain [offset].
*/
fun readFloat(offset: Int): Float fun readFloat(offset: Int): Float
/**
* Reads [Byte] at certain [offset].
*/
fun readByte(offset: Int): Byte fun readByte(offset: Int): Byte
/**
* Reads [Short] at certain [offset].
*/
fun readShort(offset: Int): Short fun readShort(offset: Int): Short
/**
* Reads [Int] at certain [offset].
*/
fun readInt(offset: Int): Int fun readInt(offset: Int): Int
/**
* Reads [Long] at certain [offset].
*/
fun readLong(offset: Int): Long fun readLong(offset: Int): Long
/**
* Disposes this reader if needed.
*/
fun release() fun release()
} }
/** /**
* Use the memory for read then release the reader * Uses the memory for read then releases the reader.
*/ */
inline fun Memory.read(block: MemoryReader.() -> Unit) { inline fun Memory.read(block: MemoryReader.() -> Unit) {
reader().apply(block).apply { release() } reader().apply(block).release()
} }
/**
* The interface to write primitive types into this memory.
*/
interface MemoryWriter { interface MemoryWriter {
/**
* The underlying memory.
*/
val memory: Memory val memory: Memory
/**
* Writes [Double] at certain [offset].
*/
fun writeDouble(offset: Int, value: Double) fun writeDouble(offset: Int, value: Double)
/**
* Writes [Float] at certain [offset].
*/
fun writeFloat(offset: Int, value: Float) fun writeFloat(offset: Int, value: Float)
/**
* Writes [Byte] at certain [offset].
*/
fun writeByte(offset: Int, value: Byte) fun writeByte(offset: Int, value: Byte)
/**
* Writes [Short] at certain [offset].
*/
fun writeShort(offset: Int, value: Short) fun writeShort(offset: Int, value: Short)
/**
* Writes [Int] at certain [offset].
*/
fun writeInt(offset: Int, value: Int) fun writeInt(offset: Int, value: Int)
/**
* Writes [Long] at certain [offset].
*/
fun writeLong(offset: Int, value: Long) fun writeLong(offset: Int, value: Long)
/**
* Disposes this writer if needed.
*/
fun release() fun release()
} }
/** /**
* Use the memory for write then release the writer * Uses the memory for write then releases the writer.
*/ */
inline fun Memory.write(block: MemoryWriter.() -> Unit) { inline fun Memory.write(block: MemoryWriter.() -> Unit) {
writer().apply(block).apply { release() } writer().apply(block).release()
} }
/** /**
* Allocate the most effective platform-specific memory * Allocates the most effective platform-specific memory.
*/ */
expect fun Memory.Companion.allocate(length: Int): Memory expect fun Memory.Companion.allocate(length: Int): Memory
/** /**
* Wrap a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied * Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied
* and could be mutated independently from the resulting [Memory] * and could be mutated independently from the resulting [Memory].
*/ */
expect fun Memory.Companion.wrap(array: ByteArray): Memory expect fun Memory.Companion.wrap(array: ByteArray): Memory

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@ -1,35 +1,53 @@
package scientifik.memory package scientifik.memory
/** /**
* A specification to read or write custom objects with fixed size in bytes * A specification to read or write custom objects with fixed size in bytes.
*
* @param T the type of object this spec manages.
*/ */
interface MemorySpec<T : Any> { interface MemorySpec<T : Any> {
/** /**
* Size of [T] in bytes after serialization * Size of [T] in bytes after serialization.
*/ */
val objectSize: Int val objectSize: Int
/**
* Reads the object starting from [offset].
*/
fun MemoryReader.read(offset: Int): T fun MemoryReader.read(offset: Int): T
//TODO consider thread safety
// TODO consider thread safety
/**
* Writes the object [value] starting from [offset].
*/
fun MemoryWriter.write(offset: Int, value: T) fun MemoryWriter.write(offset: Int, value: T)
} }
fun <T : Any> MemoryReader.read(spec: MemorySpec<T>, offset: Int): T = spec.run { read(offset) } /**
fun <T : Any> MemoryWriter.write(spec: MemorySpec<T>, offset: Int, value: T) = spec.run { write(offset, value) } * Reads the object with [spec] starting from [offset].
*/
fun <T : Any> MemoryReader.read(spec: MemorySpec<T>, offset: Int): T = with(spec) { read(offset) }
inline fun <reified T : Any> MemoryReader.readArray(spec: MemorySpec<T>, offset: Int, size: Int) = /**
* Writes the object [value] with [spec] starting from [offset].
*/
fun <T : Any> MemoryWriter.write(spec: MemorySpec<T>, offset: Int, value: T): Unit = with(spec) { write(offset, value) }
/**
* Reads array of [size] objects mapped by [spec] at certain [offset].
*/
inline fun <reified T : Any> MemoryReader.readArray(spec: MemorySpec<T>, offset: Int, size: Int): Array<T> =
Array(size) { i -> Array(size) { i ->
spec.run { spec.run {
read(offset + i * objectSize) read(offset + i * objectSize)
} }
} }
fun <T : Any> MemoryWriter.writeArray(spec: MemorySpec<T>, offset: Int, array: Array<T>) { /**
spec.run { * Writes [array] of objects mapped by [spec] at certain [offset].
for (i in array.indices) { */
write(offset + i * objectSize, array[i]) fun <T : Any> MemoryWriter.writeArray(spec: MemorySpec<T>, offset: Int, array: Array<T>): Unit =
} with(spec) { array.indices.forEach { i -> write(offset + i * objectSize, array[i]) } }
}
}
//TODO It is possible to add elastic MemorySpec with unknown object size // TODO It is possible to add elastic MemorySpec with unknown object size

View File

@ -4,13 +4,13 @@ import org.khronos.webgl.ArrayBuffer
import org.khronos.webgl.DataView import org.khronos.webgl.DataView
import org.khronos.webgl.Int8Array import org.khronos.webgl.Int8Array
class DataViewMemory(val view: DataView) : Memory { private class DataViewMemory(val view: DataView) : Memory {
override val size: Int get() = view.byteLength override val size: Int get() = view.byteLength
override fun view(offset: Int, length: Int): Memory { override fun view(offset: Int, length: Int): Memory {
require(offset >= 0) { "offset shouldn't be negative: $offset" } require(offset >= 0) { "offset shouldn't be negative: $offset" }
require(length >= 0) { "length shouldn't be negative: $length" } require(length >= 0) { "length shouldn't be negative: $length" }
require(offset + length <= size) { "Can't view memory outside the parent region." }
if (offset + length > size) if (offset + length > size)
throw IndexOutOfBoundsException("offset + length > size: $offset + $length > $size") throw IndexOutOfBoundsException("offset + length > size: $offset + $length > $size")
@ -33,11 +33,11 @@ class DataViewMemory(val view: DataView) : Memory {
override fun readInt(offset: Int): Int = view.getInt32(offset, false) override fun readInt(offset: Int): Int = view.getInt32(offset, false)
override fun readLong(offset: Int): Long = (view.getInt32(offset, false).toLong() shl 32) or override fun readLong(offset: Int): Long =
view.getInt32(offset + 4, false).toLong() view.getInt32(offset, false).toLong() shl 32 or view.getInt32(offset + 4, false).toLong()
override fun release() { override fun release() {
// does nothing on JS because of GC // does nothing on JS
} }
} }
@ -72,7 +72,7 @@ class DataViewMemory(val view: DataView) : Memory {
} }
override fun release() { override fun release() {
//does nothing on JS // does nothing on JS
} }
} }
@ -81,13 +81,17 @@ class DataViewMemory(val view: DataView) : Memory {
} }
/** /**
* Allocate the most effective platform-specific memory * Allocates memory based on a [DataView].
*/ */
actual fun Memory.Companion.allocate(length: Int): Memory { actual fun Memory.Companion.allocate(length: Int): Memory {
val buffer = ArrayBuffer(length) val buffer = ArrayBuffer(length)
return DataViewMemory(DataView(buffer, 0, length)) return DataViewMemory(DataView(buffer, 0, length))
} }
/**
* Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied
* and could be mutated independently from the resulting [Memory].
*/
actual fun Memory.Companion.wrap(array: ByteArray): Memory { actual fun Memory.Companion.wrap(array: ByteArray): Memory {
@Suppress("CAST_NEVER_SUCCEEDS") val int8Array = array as Int8Array @Suppress("CAST_NEVER_SUCCEEDS") val int8Array = array as Int8Array
return DataViewMemory(DataView(int8Array.buffer, int8Array.byteOffset, int8Array.length)) return DataViewMemory(DataView(int8Array.buffer, int8Array.byteOffset, int8Array.length))

View File

@ -6,19 +6,18 @@ import java.nio.file.Files
import java.nio.file.Path import java.nio.file.Path
import java.nio.file.StandardOpenOption import java.nio.file.StandardOpenOption
private class ByteBufferMemory( private class ByteBufferMemory(
val buffer: ByteBuffer, val buffer: ByteBuffer,
val startOffset: Int = 0, val startOffset: Int = 0,
override val size: Int = buffer.limit() override val size: Int = buffer.limit()
) : Memory { ) : Memory {
@Suppress("NOTHING_TO_INLINE") @Suppress("NOTHING_TO_INLINE")
private inline fun position(o: Int): Int = startOffset + o private inline fun position(o: Int): Int = startOffset + o
override fun view(offset: Int, length: Int): Memory { override fun view(offset: Int, length: Int): Memory {
if (offset + length > size) error("Selecting a Memory view outside of memory range") require(offset >= 0) { "offset shouldn't be negative: $offset" }
require(length >= 0) { "length shouldn't be negative: $length" }
require(offset + length <= size) { "Can't view memory outside the parent region." }
return ByteBufferMemory(buffer, position(offset), length) return ByteBufferMemory(buffer, position(offset), length)
} }
@ -28,10 +27,9 @@ private class ByteBufferMemory(
copy.put(buffer) copy.put(buffer)
copy.flip() copy.flip()
return ByteBufferMemory(copy) return ByteBufferMemory(copy)
} }
private val reader = object : MemoryReader { private val reader: MemoryReader = object : MemoryReader {
override val memory: Memory get() = this@ByteBufferMemory override val memory: Memory get() = this@ByteBufferMemory
override fun readDouble(offset: Int) = buffer.getDouble(position(offset)) override fun readDouble(offset: Int) = buffer.getDouble(position(offset))
@ -47,13 +45,13 @@ private class ByteBufferMemory(
override fun readLong(offset: Int) = buffer.getLong(position(offset)) override fun readLong(offset: Int) = buffer.getLong(position(offset))
override fun release() { override fun release() {
//does nothing on JVM // does nothing on JVM
} }
} }
override fun reader(): MemoryReader = reader override fun reader(): MemoryReader = reader
private val writer = object : MemoryWriter { private val writer: MemoryWriter = object : MemoryWriter {
override val memory: Memory get() = this@ByteBufferMemory override val memory: Memory get() = this@ByteBufferMemory
override fun writeDouble(offset: Int, value: Double) { override fun writeDouble(offset: Int, value: Double) {
@ -81,7 +79,7 @@ private class ByteBufferMemory(
} }
override fun release() { override fun release() {
//does nothing on JVM // does nothing on JVM
} }
} }
@ -89,26 +87,32 @@ private class ByteBufferMemory(
} }
/** /**
* Allocate the most effective platform-specific memory * Allocates memory based on a [ByteBuffer].
*/ */
actual fun Memory.Companion.allocate(length: Int): Memory { actual fun Memory.Companion.allocate(length: Int): Memory =
val buffer = ByteBuffer.allocate(length) ByteBufferMemory(checkNotNull(ByteBuffer.allocate(length)))
return ByteBufferMemory(buffer)
}
actual fun Memory.Companion.wrap(array: ByteArray): Memory { /**
val buffer = ByteBuffer.wrap(array) * Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied
return ByteBufferMemory(buffer) * and could be mutated independently from the resulting [Memory].
} */
actual fun Memory.Companion.wrap(array: ByteArray): Memory = ByteBufferMemory(checkNotNull(ByteBuffer.wrap(array)))
/**
* Wraps this [ByteBuffer] to [Memory] object.
*
* @receiver the byte buffer.
* @param startOffset the start offset.
* @param size the size of memory to map.
* @return the [Memory] object.
*/
fun ByteBuffer.asMemory(startOffset: Int = 0, size: Int = limit()): Memory = fun ByteBuffer.asMemory(startOffset: Int = 0, size: Int = limit()): Memory =
ByteBufferMemory(this, startOffset, size) ByteBufferMemory(this, startOffset, size)
/** /**
* Use direct memory-mapped buffer from file to read something and close it afterwards. * Uses direct memory-mapped buffer from file to read something and close it afterwards.
*/ */
fun <R> Path.readAsMemory(position: Long = 0, size: Long = Files.size(this), block: Memory.() -> R): R { fun <R> Path.readAsMemory(position: Long = 0, size: Long = Files.size(this), block: Memory.() -> R): R =
return FileChannel.open(this, StandardOpenOption.READ).use { FileChannel.open(this, StandardOpenOption.READ).use {
ByteBufferMemory(it.map(FileChannel.MapMode.READ_ONLY, position, size)).block() ByteBufferMemory(it.map(FileChannel.MapMode.READ_ONLY, position, size)).block()
} }
}