forked from kscience/kmath
Change package name to space.kscience
This commit is contained in:
parent
f201210fa0
commit
8485d28872
@ -21,11 +21,11 @@
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- Basic Quaternion vector support in `kmath-complex`.
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### Changed
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- Package changed from `scientifik` to `kscience.kmath`
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- Gradle version: 6.6 -> 6.8
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- Package changed from `scientifik` to `space.kscience`
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- Gradle version: 6.6 -> 6.8.2
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- Minor exceptions refactor (throwing `IllegalArgumentException` by argument checks instead of `IllegalStateException`)
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- `Polynomial` secondary constructor made function
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- Kotlin version: 1.3.72 -> 1.4.21
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- Kotlin version: 1.3.72 -> 1.4.30
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- `kmath-ast` doesn't depend on heavy `kotlin-reflect` library
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- Full autodiff refactoring based on `Symbol`
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- `kmath-prob` renamed to `kmath-stat`
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@ -41,6 +41,7 @@
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- Refactor histograms. They are marked as prototype
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- `Complex` and related features moved to a separate module `kmath-complex`
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- Refactor AlgebraElement
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- `symbol` method in `Algebra` renamed to `bindSymbol` to avoid ambiguity
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### Deprecated
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@ -5,8 +5,6 @@ plugins {
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}
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internal val kmathVersion: String by extra("0.2.0-dev-7")
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internal val bintrayRepo: String by extra("kscience")
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internal val githubProject: String by extra("kmath")
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allprojects {
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repositories {
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@ -23,7 +21,7 @@ allprojects {
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mavenCentral()
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}
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group = "kscience.kmath"
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group = "space.kscience"
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version = kmathVersion
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}
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@ -37,4 +35,6 @@ readme {
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ksciencePublish {
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spaceRepo = "https://maven.pkg.jetbrains.space/mipt-npm/p/sci/maven"
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bintrayRepo = "kscience"
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githubProject = "kmath"
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}
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@ -5,7 +5,7 @@ operation, say `+`, one needs two objects of a type `T` and an algebra context,
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say `Space<T>`. Next one needs to run the actual operation in the context:
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```kotlin
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import kscience.kmath.operations.*
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import space.kscience.kmath.operations.*
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val a: T = ...
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val b: T = ...
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@ -47,7 +47,7 @@ but it also holds reference to the `ComplexField` singleton, which allows perfor
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numbers without explicit involving the context like:
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```kotlin
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import kscience.kmath.operations.*
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import space.kscience.kmath.operations.*
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// Using elements
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val c1 = Complex(1.0, 1.0)
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@ -82,7 +82,7 @@ operations in all performance-critical places. The performance of element operat
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KMath submits both contexts and elements for builtin algebraic structures:
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```kotlin
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import kscience.kmath.operations.*
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import space.kscience.kmath.operations.*
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val c1 = Complex(1.0, 2.0)
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val c2 = ComplexField.i
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@ -95,7 +95,7 @@ val c3 = ComplexField { c1 + c2 }
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Also, `ComplexField` features special operations to mix complex and real numbers, for example:
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```kotlin
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import kscience.kmath.operations.*
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import space.kscience.kmath.operations.*
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val c1 = Complex(1.0, 2.0)
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val c2 = ComplexField { c1 - 1.0 } // Returns: Complex(re=0.0, im=2.0)
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@ -76,6 +76,14 @@ benchmark {
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iterationTimeUnit = "ms" // time unity for iterationTime, default is seconds
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include("DotBenchmark")
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}
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configurations.register("expressions") {
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warmups = 1 // number of warmup iterations
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iterations = 3 // number of iterations
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iterationTime = 500 // time in seconds per iteration
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iterationTimeUnit = "ms" // time unity for iterationTime, default is seconds
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include("ExpressionsInterpretersBenchmark")
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}
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}
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kotlin.sourceSets.all {
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@ -1,34 +0,0 @@
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package kscience.kmath.benchmarks
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import java.nio.IntBuffer
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@State(Scope.Benchmark)
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internal class ArrayBenchmark {
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@Benchmark
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fun benchmarkArrayRead() {
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var res = 0
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for (i in 1..size) res += array[size - i]
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}
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@Benchmark
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fun benchmarkBufferRead() {
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var res = 0
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for (i in 1..size) res += arrayBuffer[size - i]
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}
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@Benchmark
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fun nativeBufferRead() {
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var res = 0
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for (i in 1..size) res += nativeBuffer[size - i]
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}
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companion object {
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const val size: Int = 1000
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val array: IntArray = IntArray(size) { it }
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val arrayBuffer: IntBuffer = IntBuffer.wrap(array)
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val nativeBuffer: IntBuffer = IntBuffer.allocate(size).also { for (i in 0 until size) it.put(i, i) }
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}
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}
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@ -0,0 +1,34 @@
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package space.kscience.kmath.benchmarks
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import java.nio.IntBuffer
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@State(Scope.Benchmark)
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internal class ArrayBenchmark {
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@Benchmark
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fun benchmarkArrayRead() {
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var res = 0
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for (i in 1..space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size) res += space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.array[space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size - i]
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}
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@Benchmark
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fun benchmarkBufferRead() {
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var res = 0
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for (i in 1..space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size) res += space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.arrayBuffer[space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size - i]
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}
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@Benchmark
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fun nativeBufferRead() {
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var res = 0
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for (i in 1..space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size) res += space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.nativeBuffer[space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size - i]
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}
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companion object {
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const val size: Int = 1000
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val array: IntArray = IntArray(space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size) { it }
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val arrayBuffer: IntBuffer = IntBuffer.wrap(space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.array)
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val nativeBuffer: IntBuffer = IntBuffer.allocate(space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size).also { for (i in 0 until space.kscience.kmath.benchmarks.ArrayBenchmark.Companion.size) it.put(i, i) }
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}
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}
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@ -1,12 +1,12 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kscience.kmath.complex.Complex
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import kscience.kmath.complex.complex
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import kscience.kmath.structures.MutableBuffer
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import kscience.kmath.structures.RealBuffer
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.complex.Complex
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import space.kscience.kmath.complex.complex
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import space.kscience.kmath.structures.MutableBuffer
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import space.kscience.kmath.structures.RealBuffer
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@State(Scope.Benchmark)
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internal class BufferBenchmark {
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@ -1,16 +1,16 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kotlinx.benchmark.Benchmark
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import kscience.kmath.commons.linear.CMMatrixContext
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import kscience.kmath.ejml.EjmlMatrixContext
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import kscience.kmath.linear.BufferMatrixContext
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import kscience.kmath.linear.Matrix
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import kscience.kmath.linear.RealMatrixContext
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import kscience.kmath.operations.RealField
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import kscience.kmath.operations.invoke
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import kscience.kmath.structures.Buffer
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.commons.linear.CMMatrixContext
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import space.kscience.kmath.ejml.EjmlMatrixContext
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import space.kscience.kmath.linear.BufferMatrixContext
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import space.kscience.kmath.linear.Matrix
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import space.kscience.kmath.linear.RealMatrixContext
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import space.kscience.kmath.operations.RealField
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import space.kscience.kmath.operations.invoke
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import space.kscience.kmath.structures.Buffer
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import kotlin.random.Random
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@State(Scope.Benchmark)
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@ -1,27 +1,29 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kscience.kmath.asm.compile
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import kscience.kmath.ast.MstField
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import kscience.kmath.ast.mstInField
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import kscience.kmath.expressions.Expression
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import kscience.kmath.expressions.expressionInField
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import kscience.kmath.expressions.invoke
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import kscience.kmath.expressions.symbol
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import kscience.kmath.operations.Field
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import kscience.kmath.operations.RealField
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.asm.compile
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import space.kscience.kmath.ast.mstInField
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import space.kscience.kmath.expressions.Expression
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import space.kscience.kmath.expressions.expressionInField
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import space.kscience.kmath.expressions.invoke
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import space.kscience.kmath.expressions.symbol
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import space.kscience.kmath.operations.Field
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import space.kscience.kmath.operations.RealField
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import space.kscience.kmath.operations.bindSymbol
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import kotlin.random.Random
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@State(Scope.Benchmark)
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internal class ExpressionsInterpretersBenchmark {
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private val algebra: Field<Double> = RealField
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val x by symbol
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@Benchmark
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fun functionalExpression() {
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val expr = algebra.expressionInField {
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symbol("x") * const(2.0) + const(2.0) / symbol("x") - const(16.0)
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val x = bindSymbol(x)
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x * const(2.0) + const(2.0) / x - const(16.0)
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}
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invokeAndSum(expr)
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@ -30,7 +32,8 @@ internal class ExpressionsInterpretersBenchmark {
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@Benchmark
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fun mstExpression() {
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val expr = algebra.mstInField {
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symbol("x") * 2.0 + 2.0 / symbol("x") - 16.0
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val x = bindSymbol(x)
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x * 2.0 + 2.0 / x - 16.0
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}
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invokeAndSum(expr)
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@ -39,7 +42,8 @@ internal class ExpressionsInterpretersBenchmark {
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@Benchmark
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fun asmExpression() {
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val expr = algebra.mstInField {
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MstField.symbol("x") * 2.0 + 2.0 / MstField.symbol("x") - 16.0
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val x = bindSymbol(x)
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x * 2.0 + 2.0 / x - 16.0
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}.compile()
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invokeAndSum(expr)
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@ -47,8 +51,10 @@ internal class ExpressionsInterpretersBenchmark {
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@Benchmark
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fun rawExpression() {
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val x by symbol
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val expr = Expression<Double> { args -> args.getValue(x) * 2.0 + 2.0 / args.getValue(x) - 16.0 }
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val expr = Expression<Double> { args ->
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val x = args.getValue(x)
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x * 2.0 + 2.0 / x - 16.0
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}
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invokeAndSum(expr)
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}
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@ -57,7 +63,7 @@ internal class ExpressionsInterpretersBenchmark {
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var sum = 0.0
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repeat(1000000) {
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sum += expr("x" to random.nextDouble())
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sum += expr(x to random.nextDouble())
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}
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println(sum)
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@ -1,17 +1,17 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kotlinx.benchmark.Benchmark
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import kscience.kmath.commons.linear.CMMatrixContext
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import kscience.kmath.commons.linear.CMMatrixContext.dot
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import kscience.kmath.commons.linear.inverse
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import kscience.kmath.ejml.EjmlMatrixContext
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import kscience.kmath.ejml.inverse
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import kscience.kmath.linear.Matrix
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import kscience.kmath.linear.MatrixContext
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import kscience.kmath.linear.inverseWithLup
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import kscience.kmath.linear.real
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.commons.linear.CMMatrixContext
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import space.kscience.kmath.commons.linear.CMMatrixContext.dot
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import space.kscience.kmath.commons.linear.inverse
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import space.kscience.kmath.ejml.EjmlMatrixContext
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import space.kscience.kmath.ejml.inverse
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import space.kscience.kmath.linear.Matrix
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import space.kscience.kmath.linear.MatrixContext
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import space.kscience.kmath.linear.inverseWithLup
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import space.kscience.kmath.linear.real
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import kotlin.random.Random
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@State(Scope.Benchmark)
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@ -1,11 +1,11 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kscience.kmath.nd.*
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import kscience.kmath.operations.RealField
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import kscience.kmath.structures.Buffer
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.nd.*
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import space.kscience.kmath.operations.RealField
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import space.kscience.kmath.structures.Buffer
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@State(Scope.Benchmark)
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internal class NDFieldBenchmark {
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@ -1,12 +1,12 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kscience.kmath.nd.*
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import kscience.kmath.operations.RealField
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import kscience.kmath.viktor.ViktorNDField
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import org.jetbrains.bio.viktor.F64Array
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.nd.*
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import space.kscience.kmath.operations.RealField
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import space.kscience.kmath.viktor.ViktorNDField
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@State(Scope.Benchmark)
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internal class ViktorBenchmark {
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@ -1,12 +1,12 @@
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package kscience.kmath.benchmarks
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package space.kscience.kmath.benchmarks
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import kscience.kmath.nd.*
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import kscience.kmath.operations.RealField
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import kscience.kmath.viktor.ViktorNDField
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import org.jetbrains.bio.viktor.F64Array
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import org.openjdk.jmh.annotations.Benchmark
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import org.openjdk.jmh.annotations.Scope
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import org.openjdk.jmh.annotations.State
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import space.kscience.kmath.nd.*
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import space.kscience.kmath.operations.RealField
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import space.kscience.kmath.viktor.ViktorNDField
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@State(Scope.Benchmark)
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internal class ViktorLogBenchmark {
|
@ -0,0 +1,15 @@
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package space.kscience.kmath.ast
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import space.kscience.kmath.expressions.invoke
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import space.kscience.kmath.operations.RealField
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fun main() {
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val expr = RealField.mstInField {
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val x = bindSymbol("x")
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x * 2.0 + 2.0 / x - 16.0
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}
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repeat(10000000){
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expr.invoke("x" to 1.0)
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}
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}
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@ -1,11 +1,11 @@
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package kscience.kmath.ast
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package space.kscience.kmath.ast
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import kscience.kmath.asm.compile
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import kscience.kmath.expressions.derivative
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import kscience.kmath.expressions.invoke
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import kscience.kmath.expressions.symbol
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import kscience.kmath.kotlingrad.differentiable
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import kscience.kmath.operations.RealField
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import space.kscience.kmath.asm.compile
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import space.kscience.kmath.expressions.derivative
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import space.kscience.kmath.expressions.invoke
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import space.kscience.kmath.expressions.symbol
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import space.kscience.kmath.kotlingrad.differentiable
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import space.kscience.kmath.operations.RealField
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/**
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* In this example, x^2-4*x-44 function is differentiated with Kotlin∇, and the autodiff result is compared with
|
@ -1,19 +1,19 @@
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package kscience.kmath.commons.fit
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package space.kscience.kmath.commons.fit
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import kotlinx.html.br
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import kotlinx.html.h3
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import kscience.kmath.commons.optimization.chiSquared
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import kscience.kmath.commons.optimization.minimize
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import kscience.kmath.expressions.symbol
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import kscience.kmath.real.RealVector
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import kscience.kmath.real.map
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import kscience.kmath.real.step
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import kscience.kmath.stat.*
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import kscience.kmath.structures.asIterable
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import kscience.kmath.structures.toList
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import kscience.plotly.*
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import kscience.plotly.models.ScatterMode
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import kscience.plotly.models.TraceValues
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import space.kscience.kmath.commons.optimization.chiSquared
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import space.kscience.kmath.commons.optimization.minimize
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import space.kscience.kmath.expressions.symbol
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import space.kscience.kmath.real.RealVector
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import space.kscience.kmath.real.map
|
||||
import space.kscience.kmath.real.step
|
||||
import space.kscience.kmath.stat.*
|
||||
import space.kscience.kmath.structures.asIterable
|
||||
import space.kscience.kmath.structures.toList
|
||||
import kotlin.math.pow
|
||||
import kotlin.math.sqrt
|
||||
|
||||
@ -63,7 +63,7 @@ fun main() {
|
||||
val a = bind(a)
|
||||
val b = bind(b)
|
||||
//Include default value for c if it is not provided as a parameter
|
||||
val c = bindOrNull(c) ?: one
|
||||
val c = bindSymbolOrNull(c) ?: one
|
||||
a * x1.pow(2) + b * x1 + c
|
||||
}
|
||||
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.operations
|
||||
package space.kscience.kmath.operations
|
||||
|
||||
fun main() {
|
||||
val res = BigIntField { number(1) * 2 }
|
@ -1,8 +1,8 @@
|
||||
package kscience.kmath.operations
|
||||
package space.kscience.kmath.operations
|
||||
|
||||
import kscience.kmath.complex.Complex
|
||||
import kscience.kmath.complex.complex
|
||||
import kscience.kmath.nd.NDAlgebra
|
||||
import space.kscience.kmath.complex.Complex
|
||||
import space.kscience.kmath.complex.complex
|
||||
import space.kscience.kmath.nd.NDAlgebra
|
||||
|
||||
fun main() {
|
||||
// 2d element
|
@ -3,9 +3,9 @@ package kscience.kmath.commons.prob
|
||||
import kotlinx.coroutines.Dispatchers
|
||||
import kotlinx.coroutines.async
|
||||
import kotlinx.coroutines.runBlocking
|
||||
import kscience.kmath.stat.*
|
||||
import org.apache.commons.rng.sampling.distribution.ZigguratNormalizedGaussianSampler
|
||||
import org.apache.commons.rng.simple.RandomSource
|
||||
import space.kscience.kmath.stat.*
|
||||
import java.time.Duration
|
||||
import java.time.Instant
|
||||
|
@ -1,8 +1,8 @@
|
||||
package kscience.kmath.stat
|
||||
package space.kscience.kmath.stat
|
||||
|
||||
import kotlinx.coroutines.runBlocking
|
||||
import kscience.kmath.chains.Chain
|
||||
import kscience.kmath.chains.collectWithState
|
||||
import space.kscience.kmath.chains.Chain
|
||||
import space.kscience.kmath.chains.collectWithState
|
||||
|
||||
/**
|
||||
* The state of distribution averager
|
@ -1,14 +1,14 @@
|
||||
@file:Suppress("unused")
|
||||
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kscience.kmath.complex.*
|
||||
import kscience.kmath.linear.transpose
|
||||
import kscience.kmath.nd.NDAlgebra
|
||||
import kscience.kmath.nd.NDStructure
|
||||
import kscience.kmath.nd.as2D
|
||||
import kscience.kmath.nd.real
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.complex.*
|
||||
import space.kscience.kmath.linear.transpose
|
||||
import space.kscience.kmath.nd.NDAlgebra
|
||||
import space.kscience.kmath.nd.NDStructure
|
||||
import space.kscience.kmath.nd.as2D
|
||||
import space.kscience.kmath.nd.real
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.system.measureTimeMillis
|
||||
|
||||
fun main() {
|
@ -1,12 +1,12 @@
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kotlinx.coroutines.GlobalScope
|
||||
import kscience.kmath.nd.*
|
||||
import kscience.kmath.nd4j.Nd4jArrayField
|
||||
import kscience.kmath.operations.RealField
|
||||
import kscience.kmath.operations.invoke
|
||||
import kscience.kmath.viktor.ViktorNDField
|
||||
import org.nd4j.linalg.factory.Nd4j
|
||||
import space.kscience.kmath.nd.*
|
||||
import space.kscience.kmath.nd4j.Nd4jArrayField
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.viktor.ViktorNDField
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
import kotlin.system.measureTimeMillis
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.nd.*
|
||||
import kscience.kmath.operations.ExtendedField
|
||||
import kscience.kmath.operations.RealField
|
||||
import kscience.kmath.operations.RingWithNumbers
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.nd.*
|
||||
import space.kscience.kmath.operations.ExtendedField
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.operations.RingWithNumbers
|
||||
import java.util.*
|
||||
import java.util.stream.IntStream
|
||||
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kscience.kmath.nd.DefaultStrides
|
||||
import kscience.kmath.nd.NDBuffer
|
||||
import space.kscience.kmath.nd.DefaultStrides
|
||||
import space.kscience.kmath.nd.NDBuffer
|
||||
import kotlin.system.measureTimeMillis
|
||||
|
||||
fun main() {
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kscience.kmath.nd.NDStructure
|
||||
import kscience.kmath.nd.mapToBuffer
|
||||
import space.kscience.kmath.nd.NDStructure
|
||||
import space.kscience.kmath.nd.mapToBuffer
|
||||
import kotlin.system.measureTimeMillis
|
||||
|
||||
fun main() {
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.structures
|
||||
package space.kscience.kmath.structures
|
||||
|
||||
import kscience.kmath.dimensions.D2
|
||||
import kscience.kmath.dimensions.D3
|
||||
import kscience.kmath.dimensions.DMatrixContext
|
||||
import kscience.kmath.dimensions.Dimension
|
||||
import space.kscience.kmath.dimensions.D2
|
||||
import space.kscience.kmath.dimensions.D3
|
||||
import space.kscience.kmath.dimensions.DMatrixContext
|
||||
import space.kscience.kmath.dimensions.Dimension
|
||||
|
||||
private fun DMatrixContext<Double>.simple() {
|
||||
val m1 = produce<D2, D3> { i, j -> (i + j).toDouble() }
|
@ -68,9 +68,9 @@ package kscience.kmath.asm.generated;
|
||||
|
||||
import java.util.Map;
|
||||
import kotlin.jvm.functions.Function2;
|
||||
import kscience.kmath.asm.internal.MapIntrinsics;
|
||||
import kscience.kmath.expressions.Expression;
|
||||
import kscience.kmath.expressions.Symbol;
|
||||
import space.kscience.kmath.asm.internal.MapIntrinsics;
|
||||
import space.kscience.kmath.expressions.Expression;
|
||||
import space.kscience.kmath.expressions.Symbol;
|
||||
|
||||
public final class AsmCompiledExpression_45045_0 implements Expression<Double> {
|
||||
private final Object[] constants;
|
||||
|
@ -26,9 +26,9 @@ package kscience.kmath.asm.generated;
|
||||
|
||||
import java.util.Map;
|
||||
import kotlin.jvm.functions.Function2;
|
||||
import kscience.kmath.asm.internal.MapIntrinsics;
|
||||
import kscience.kmath.expressions.Expression;
|
||||
import kscience.kmath.expressions.Symbol;
|
||||
import space.kscience.kmath.asm.internal.MapIntrinsics;
|
||||
import space.kscience.kmath.expressions.Expression;
|
||||
import space.kscience.kmath.expressions.Symbol;
|
||||
|
||||
public final class AsmCompiledExpression_45045_0 implements Expression<Double> {
|
||||
private final Object[] constants;
|
||||
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import kscience.kmath.operations.Algebra
|
||||
import kscience.kmath.operations.NumericAlgebra
|
||||
import space.kscience.kmath.operations.Algebra
|
||||
import space.kscience.kmath.operations.NumericAlgebra
|
||||
|
||||
/**
|
||||
* A Mathematical Syntax Tree (MST) node for mathematical expressions.
|
||||
@ -55,7 +55,7 @@ public fun <T> Algebra<T>.evaluate(node: MST): T = when (node) {
|
||||
is MST.Numeric -> (this as? NumericAlgebra<T>)?.number(node.value)
|
||||
?: error("Numeric nodes are not supported by $this")
|
||||
|
||||
is MST.Symbolic -> symbol(node.value)
|
||||
is MST.Symbolic -> bindSymbol(node.value)
|
||||
|
||||
is MST.Unary -> when {
|
||||
this is NumericAlgebra && node.value is MST.Numeric -> unaryOperationFunction(node.operation)(number(node.value.value))
|
@ -1,14 +1,14 @@
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.operations.*
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.operations.*
|
||||
|
||||
/**
|
||||
* [Algebra] over [MST] nodes.
|
||||
*/
|
||||
public object MstAlgebra : NumericAlgebra<MST> {
|
||||
public override fun number(value: Number): MST.Numeric = MST.Numeric(value)
|
||||
public override fun symbol(value: String): MST.Symbolic = MST.Symbolic(value)
|
||||
public override fun bindSymbol(value: String): MST.Symbolic = MST.Symbolic(value)
|
||||
|
||||
public override fun unaryOperationFunction(operation: String): (arg: MST) -> MST.Unary =
|
||||
{ arg -> MST.Unary(operation, arg) }
|
||||
@ -24,7 +24,7 @@ public object MstSpace : Space<MST>, NumericAlgebra<MST> {
|
||||
public override val zero: MST.Numeric by lazy { number(0.0) }
|
||||
|
||||
public override fun number(value: Number): MST.Numeric = MstAlgebra.number(value)
|
||||
public override fun symbol(value: String): MST.Symbolic = MstAlgebra.symbol(value)
|
||||
public override fun bindSymbol(value: String): MST.Symbolic = MstAlgebra.bindSymbol(value)
|
||||
public override fun add(a: MST, b: MST): MST.Binary = binaryOperationFunction(SpaceOperations.PLUS_OPERATION)(a, b)
|
||||
public override operator fun MST.unaryPlus(): MST.Unary =
|
||||
unaryOperationFunction(SpaceOperations.PLUS_OPERATION)(this)
|
||||
@ -56,7 +56,7 @@ public object MstRing : Ring<MST>, RingWithNumbers<MST> {
|
||||
public override val one: MST.Numeric by lazy { number(1.0) }
|
||||
|
||||
public override fun number(value: Number): MST.Numeric = MstSpace.number(value)
|
||||
public override fun symbol(value: String): MST.Symbolic = MstSpace.symbol(value)
|
||||
public override fun bindSymbol(value: String): MST.Symbolic = MstSpace.bindSymbol(value)
|
||||
public override fun add(a: MST, b: MST): MST.Binary = MstSpace.add(a, b)
|
||||
public override fun multiply(a: MST, k: Number): MST.Binary = MstSpace.multiply(a, k)
|
||||
public override fun multiply(a: MST, b: MST): MST.Binary =
|
||||
@ -84,7 +84,7 @@ public object MstField : Field<MST>, RingWithNumbers<MST> {
|
||||
public override val one: MST.Numeric
|
||||
get() = MstRing.one
|
||||
|
||||
public override fun symbol(value: String): MST.Symbolic = MstRing.symbol(value)
|
||||
public override fun bindSymbol(value: String): MST.Symbolic = MstRing.bindSymbol(value)
|
||||
public override fun number(value: Number): MST.Numeric = MstRing.number(value)
|
||||
public override fun add(a: MST, b: MST): MST.Binary = MstRing.add(a, b)
|
||||
public override fun multiply(a: MST, k: Number): MST.Binary = MstRing.multiply(a, k)
|
||||
@ -113,7 +113,7 @@ public object MstExtendedField : ExtendedField<MST>, NumericAlgebra<MST> {
|
||||
public override val one: MST.Numeric
|
||||
get() = MstField.one
|
||||
|
||||
public override fun symbol(value: String): MST.Symbolic = MstField.symbol(value)
|
||||
public override fun bindSymbol(value: String): MST.Symbolic = MstField.bindSymbol(value)
|
||||
public override fun number(value: Number): MST.Numeric = MstRing.number(value)
|
||||
public override fun sin(arg: MST): MST.Unary = unaryOperationFunction(TrigonometricOperations.SIN_OPERATION)(arg)
|
||||
public override fun cos(arg: MST): MST.Unary = unaryOperationFunction(TrigonometricOperations.COS_OPERATION)(arg)
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import kscience.kmath.expressions.*
|
||||
import kscience.kmath.operations.*
|
||||
import space.kscience.kmath.expressions.*
|
||||
import space.kscience.kmath.operations.*
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
||||
@ -15,8 +15,8 @@ import kotlin.contracts.contract
|
||||
*/
|
||||
public class MstExpression<T, out A : Algebra<T>>(public val algebra: A, public val mst: MST) : Expression<T> {
|
||||
private inner class InnerAlgebra(val arguments: Map<Symbol, T>) : NumericAlgebra<T> {
|
||||
override fun symbol(value: String): T = try {
|
||||
algebra.symbol(value)
|
||||
override fun bindSymbol(value: String): T = try {
|
||||
algebra.bindSymbol(value)
|
||||
} catch (ignored: IllegalStateException) {
|
||||
null
|
||||
} ?: arguments.getValue(StringSymbol(value))
|
@ -1,3 +0,0 @@
|
||||
package kscience.kmath.estree.internal.astring
|
||||
|
||||
internal typealias Generator = Any
|
@ -1,7 +0,0 @@
|
||||
package kscience.kmath.estree.internal.stream
|
||||
|
||||
import kscience.kmath.estree.internal.emitter.Emitter
|
||||
|
||||
internal open external class Stream : Emitter {
|
||||
open fun pipe(dest: Any, options: Any): Any
|
||||
}
|
@ -1,20 +1,20 @@
|
||||
package kscience.kmath.estree
|
||||
package space.kscience.kmath.estree
|
||||
|
||||
import kscience.kmath.ast.MST
|
||||
import kscience.kmath.ast.MST.*
|
||||
import kscience.kmath.ast.MstExpression
|
||||
import kscience.kmath.estree.internal.ESTreeBuilder
|
||||
import kscience.kmath.estree.internal.estree.BaseExpression
|
||||
import kscience.kmath.expressions.Expression
|
||||
import kscience.kmath.operations.Algebra
|
||||
import kscience.kmath.operations.NumericAlgebra
|
||||
import space.kscience.kmath.ast.MST
|
||||
import space.kscience.kmath.ast.MST.*
|
||||
import space.kscience.kmath.ast.MstExpression
|
||||
import space.kscience.kmath.estree.internal.ESTreeBuilder
|
||||
import space.kscience.kmath.estree.internal.estree.BaseExpression
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import space.kscience.kmath.operations.Algebra
|
||||
import space.kscience.kmath.operations.NumericAlgebra
|
||||
|
||||
@PublishedApi
|
||||
internal fun <T> MST.compileWith(algebra: Algebra<T>): Expression<T> {
|
||||
fun ESTreeBuilder<T>.visit(node: MST): BaseExpression = when (node) {
|
||||
is Symbolic -> {
|
||||
val symbol = try {
|
||||
algebra.symbol(node.value)
|
||||
algebra.bindSymbol(node.value)
|
||||
} catch (ignored: IllegalStateException) {
|
||||
null
|
||||
}
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.estree.internal
|
||||
package space.kscience.kmath.estree.internal
|
||||
|
||||
import kscience.kmath.estree.internal.astring.generate
|
||||
import kscience.kmath.estree.internal.estree.*
|
||||
import kscience.kmath.expressions.Expression
|
||||
import kscience.kmath.expressions.Symbol
|
||||
import space.kscience.kmath.estree.internal.astring.generate
|
||||
import space.kscience.kmath.estree.internal.estree.*
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import space.kscience.kmath.expressions.Symbol
|
||||
|
||||
internal class ESTreeBuilder<T>(val bodyCallback: ESTreeBuilder<T>.() -> BaseExpression) {
|
||||
private class GeneratedExpression<T>(val executable: dynamic, val constants: Array<dynamic>) : Expression<T> {
|
@ -1,9 +1,9 @@
|
||||
@file:JsModule("astring")
|
||||
@file:JsNonModule
|
||||
|
||||
package kscience.kmath.estree.internal.astring
|
||||
package space.kscience.kmath.estree.internal.astring
|
||||
|
||||
import kscience.kmath.estree.internal.estree.BaseNode
|
||||
import space.kscience.kmath.estree.internal.estree.BaseNode
|
||||
|
||||
internal external interface Options {
|
||||
var indent: String?
|
@ -0,0 +1,3 @@
|
||||
package space.kscience.kmath.estree.internal.astring
|
||||
|
||||
internal typealias Generator = Any
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.estree.internal.emitter
|
||||
package space.kscience.kmath.estree.internal.emitter
|
||||
|
||||
internal open external class Emitter {
|
||||
constructor(obj: Any)
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.estree.internal.estree
|
||||
package space.kscience.kmath.estree.internal.estree
|
||||
|
||||
internal fun Program(sourceType: String, vararg body: dynamic) = object : Program {
|
||||
override var type = "Program"
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.estree.internal.estree
|
||||
package space.kscience.kmath.estree.internal.estree
|
||||
|
||||
import kotlin.js.RegExp
|
||||
|
@ -0,0 +1,7 @@
|
||||
package space.kscience.kmath.estree.internal.stream
|
||||
|
||||
import space.kscience.kmath.estree.internal.emitter.Emitter
|
||||
|
||||
internal open external class Stream : Emitter {
|
||||
open fun pipe(dest: Any, options: Any): Any
|
||||
}
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.estree.internal.tsstdlib
|
||||
package space.kscience.kmath.estree.internal.tsstdlib
|
||||
|
||||
internal external interface IteratorYieldResult<TYield> {
|
||||
var done: Boolean?
|
@ -1,6 +1,6 @@
|
||||
@file:Suppress("UNUSED_TYPEALIAS_PARAMETER", "DEPRECATION")
|
||||
|
||||
package kscience.kmath.estree.internal.tsstdlib
|
||||
package space.kscience.kmath.estree.internal.tsstdlib
|
||||
|
||||
import kotlin.js.RegExp
|
||||
|
@ -1,11 +1,11 @@
|
||||
package kscience.kmath.estree
|
||||
package space.kscience.kmath.estree
|
||||
|
||||
import kscience.kmath.ast.*
|
||||
import kscience.kmath.complex.ComplexField
|
||||
import kscience.kmath.complex.toComplex
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.ByteRing
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.*
|
||||
import space.kscience.kmath.complex.ComplexField
|
||||
import space.kscience.kmath.complex.toComplex
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.ByteRing
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
@ -22,7 +22,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
),
|
||||
|
||||
number(1)
|
||||
) + symbol("x") + zero
|
||||
) + bindSymbol("x") + zero
|
||||
}("x" to MST.Numeric(2))
|
||||
|
||||
val res2 = MstSpace.mstInSpace {
|
||||
@ -35,7 +35,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
),
|
||||
|
||||
number(1)
|
||||
) + symbol("x") + zero
|
||||
) + bindSymbol("x") + zero
|
||||
}.compile()("x" to MST.Numeric(2))
|
||||
|
||||
assertEquals(res1, res2)
|
||||
@ -46,7 +46,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
val res1 = ByteRing.mstInRing {
|
||||
binaryOperationFunction("+")(
|
||||
unaryOperationFunction("+")(
|
||||
(symbol("x") - (2.toByte() + (multiply(
|
||||
(bindSymbol("x") - (2.toByte() + (multiply(
|
||||
add(number(1), number(1)),
|
||||
2
|
||||
) + 1.toByte()))) * 3.0 - 1.toByte()
|
||||
@ -59,7 +59,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
val res2 = ByteRing.mstInRing {
|
||||
binaryOperationFunction("+")(
|
||||
unaryOperationFunction("+")(
|
||||
(symbol("x") - (2.toByte() + (multiply(
|
||||
(bindSymbol("x") - (2.toByte() + (multiply(
|
||||
add(number(1), number(1)),
|
||||
2
|
||||
) + 1.toByte()))) * 3.0 - 1.toByte()
|
||||
@ -75,7 +75,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
fun realField() {
|
||||
val res1 = RealField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -83,7 +83,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
|
||||
val res2 = RealField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -96,7 +96,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
fun complexField() {
|
||||
val res1 = ComplexField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -104,7 +104,7 @@ internal class TestESTreeConsistencyWithInterpreter {
|
||||
|
||||
val res2 = ComplexField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.estree
|
||||
package space.kscience.kmath.estree
|
||||
|
||||
import kscience.kmath.ast.mstInExtendedField
|
||||
import kscience.kmath.ast.mstInField
|
||||
import kscience.kmath.ast.mstInSpace
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.mstInExtendedField
|
||||
import space.kscience.kmath.ast.mstInField
|
||||
import space.kscience.kmath.ast.mstInSpace
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.random.Random
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
@ -12,27 +12,27 @@ import kotlin.test.assertEquals
|
||||
internal class TestESTreeOperationsSupport {
|
||||
@Test
|
||||
fun testUnaryOperationInvocation() {
|
||||
val expression = RealField.mstInSpace { -symbol("x") }.compile()
|
||||
val expression = RealField.mstInSpace { -bindSymbol("x") }.compile()
|
||||
val res = expression("x" to 2.0)
|
||||
assertEquals(-2.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testBinaryOperationInvocation() {
|
||||
val expression = RealField.mstInSpace { -symbol("x") + number(1.0) }.compile()
|
||||
val expression = RealField.mstInSpace { -bindSymbol("x") + number(1.0) }.compile()
|
||||
val res = expression("x" to 2.0)
|
||||
assertEquals(-1.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testConstProductInvocation() {
|
||||
val res = RealField.mstInField { symbol("x") * 2 }("x" to 2.0)
|
||||
val res = RealField.mstInField { bindSymbol("x") * 2 }("x" to 2.0)
|
||||
assertEquals(4.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testMultipleCalls() {
|
||||
val e = RealField.mstInExtendedField { sin(symbol("x")).pow(4) - 6 * symbol("x") / tanh(symbol("x")) }.compile()
|
||||
val e = RealField.mstInExtendedField { sin(bindSymbol("x")).pow(4) - 6 * bindSymbol("x") / tanh(bindSymbol("x")) }.compile()
|
||||
val r = Random(0)
|
||||
var s = 0.0
|
||||
repeat(1000000) { s += e("x" to r.nextDouble()) }
|
@ -1,52 +1,52 @@
|
||||
package kscience.kmath.estree
|
||||
package space.kscience.kmath.estree
|
||||
|
||||
import kscience.kmath.ast.mstInField
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.mstInField
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
internal class TestESTreeSpecialization {
|
||||
@Test
|
||||
fun testUnaryPlus() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("+")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("+")(bindSymbol("x")) }.compile()
|
||||
assertEquals(2.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testUnaryMinus() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("-")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("-")(bindSymbol("x")) }.compile()
|
||||
assertEquals(-2.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testAdd() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("+")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("+")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(4.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testSine() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("sin")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("sin")(bindSymbol("x")) }.compile()
|
||||
assertEquals(0.0, expr("x" to 0.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testMinus() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("-")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("-")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(0.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testDivide() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("/")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("/")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(1.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testPower() {
|
||||
val expr = RealField
|
||||
.mstInField { binaryOperationFunction("pow")(symbol("x"), number(2)) }
|
||||
.mstInField { binaryOperationFunction("pow")(bindSymbol("x"), number(2)) }
|
||||
.compile()
|
||||
|
||||
assertEquals(4.0, expr("x" to 2.0))
|
@ -1,8 +1,8 @@
|
||||
package kscience.kmath.estree
|
||||
package space.kscience.kmath.estree
|
||||
|
||||
import kscience.kmath.ast.mstInRing
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.ByteRing
|
||||
import space.kscience.kmath.ast.mstInRing
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.ByteRing
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
import kotlin.test.assertFailsWith
|
||||
@ -10,13 +10,13 @@ import kotlin.test.assertFailsWith
|
||||
internal class TestESTreeVariables {
|
||||
@Test
|
||||
fun testVariable() {
|
||||
val expr = ByteRing.mstInRing { symbol("x") }.compile()
|
||||
val expr = ByteRing.mstInRing { bindSymbol("x") }.compile()
|
||||
assertEquals(1.toByte(), expr("x" to 1.toByte()))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testUndefinedVariableFails() {
|
||||
val expr = ByteRing.mstInRing { symbol("x") }.compile()
|
||||
val expr = ByteRing.mstInRing { bindSymbol("x") }.compile()
|
||||
assertFailsWith<NoSuchElementException> { expr() }
|
||||
}
|
||||
}
|
@ -1,13 +1,13 @@
|
||||
package kscience.kmath.asm
|
||||
package space.kscience.kmath.asm
|
||||
|
||||
import kscience.kmath.asm.internal.AsmBuilder
|
||||
import kscience.kmath.asm.internal.buildName
|
||||
import kscience.kmath.ast.MST
|
||||
import kscience.kmath.ast.MST.*
|
||||
import kscience.kmath.ast.MstExpression
|
||||
import kscience.kmath.expressions.Expression
|
||||
import kscience.kmath.operations.Algebra
|
||||
import kscience.kmath.operations.NumericAlgebra
|
||||
import space.kscience.kmath.asm.internal.AsmBuilder
|
||||
import space.kscience.kmath.asm.internal.buildName
|
||||
import space.kscience.kmath.ast.MST
|
||||
import space.kscience.kmath.ast.MST.*
|
||||
import space.kscience.kmath.ast.MstExpression
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import space.kscience.kmath.operations.Algebra
|
||||
import space.kscience.kmath.operations.NumericAlgebra
|
||||
|
||||
/**
|
||||
* Compiles given MST to an Expression using AST compiler.
|
||||
@ -22,7 +22,7 @@ internal fun <T : Any> MST.compileWith(type: Class<T>, algebra: Algebra<T>): Exp
|
||||
fun AsmBuilder<T>.visit(node: MST): Unit = when (node) {
|
||||
is Symbolic -> {
|
||||
val symbol = try {
|
||||
algebra.symbol(node.value)
|
||||
algebra.bindSymbol(node.value)
|
||||
} catch (ignored: IllegalStateException) {
|
||||
null
|
||||
}
|
@ -1,15 +1,14 @@
|
||||
package kscience.kmath.asm.internal
|
||||
package space.kscience.kmath.asm.internal
|
||||
|
||||
import kscience.kmath.asm.internal.AsmBuilder.ClassLoader
|
||||
import kscience.kmath.ast.MST
|
||||
import kscience.kmath.expressions.Expression
|
||||
import org.objectweb.asm.*
|
||||
import org.objectweb.asm.Opcodes.*
|
||||
import org.objectweb.asm.Type.*
|
||||
import org.objectweb.asm.commons.InstructionAdapter
|
||||
import space.kscience.kmath.asm.internal.AsmBuilder.ClassLoader
|
||||
import space.kscience.kmath.ast.MST
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import java.lang.invoke.MethodHandles
|
||||
import java.lang.invoke.MethodType
|
||||
import java.lang.reflect.Modifier
|
||||
import java.util.stream.Collectors.toMap
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
@ -310,7 +309,7 @@ internal class AsmBuilder<T>(
|
||||
/**
|
||||
* ASM type for [Expression].
|
||||
*/
|
||||
val EXPRESSION_TYPE: Type by lazy { getObjectType("kscience/kmath/expressions/Expression") }
|
||||
val EXPRESSION_TYPE: Type by lazy { getObjectType("space/kscience/kmath/expressions/Expression") }
|
||||
|
||||
/**
|
||||
* ASM type for [java.util.Map].
|
||||
@ -335,11 +334,11 @@ internal class AsmBuilder<T>(
|
||||
/**
|
||||
* ASM type for MapIntrinsics.
|
||||
*/
|
||||
val MAP_INTRINSICS_TYPE: Type by lazy { getObjectType("kscience/kmath/asm/internal/MapIntrinsics") }
|
||||
val MAP_INTRINSICS_TYPE: Type by lazy { getObjectType("space/kscience/kmath/asm/internal/MapIntrinsics") }
|
||||
|
||||
/**
|
||||
* ASM Type for [kscience.kmath.expressions.Symbol].
|
||||
*/
|
||||
val SYMBOL_TYPE: Type by lazy { getObjectType("kscience/kmath/expressions/Symbol") }
|
||||
val SYMBOL_TYPE: Type by lazy { getObjectType("space/kscience/kmath/expressions/Symbol") }
|
||||
}
|
||||
}
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.asm.internal
|
||||
package space.kscience.kmath.asm.internal
|
||||
|
||||
import kscience.kmath.ast.MST
|
||||
import kscience.kmath.expressions.Expression
|
||||
import org.objectweb.asm.*
|
||||
import org.objectweb.asm.commons.InstructionAdapter
|
||||
import space.kscience.kmath.ast.MST
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
@ -1,9 +1,9 @@
|
||||
@file:JvmName("MapIntrinsics")
|
||||
|
||||
package kscience.kmath.asm.internal
|
||||
package space.kscience.kmath.asm.internal
|
||||
|
||||
import kscience.kmath.expressions.StringSymbol
|
||||
import kscience.kmath.expressions.Symbol
|
||||
import space.kscience.kmath.expressions.StringSymbol
|
||||
import space.kscience.kmath.expressions.Symbol
|
||||
|
||||
/**
|
||||
* Gets value with given [key] or throws [NoSuchElementException] whenever it is not present.
|
@ -1,6 +1,6 @@
|
||||
// TODO move to common when https://github.com/h0tk3y/better-parse/pull/33 is merged
|
||||
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import com.github.h0tk3y.betterParse.combinators.*
|
||||
import com.github.h0tk3y.betterParse.grammar.Grammar
|
||||
@ -13,10 +13,10 @@ import com.github.h0tk3y.betterParse.lexer.literalToken
|
||||
import com.github.h0tk3y.betterParse.lexer.regexToken
|
||||
import com.github.h0tk3y.betterParse.parser.ParseResult
|
||||
import com.github.h0tk3y.betterParse.parser.Parser
|
||||
import kscience.kmath.operations.FieldOperations
|
||||
import kscience.kmath.operations.PowerOperations
|
||||
import kscience.kmath.operations.RingOperations
|
||||
import kscience.kmath.operations.SpaceOperations
|
||||
import space.kscience.kmath.operations.FieldOperations
|
||||
import space.kscience.kmath.operations.PowerOperations
|
||||
import space.kscience.kmath.operations.RingOperations
|
||||
import space.kscience.kmath.operations.SpaceOperations
|
||||
|
||||
/**
|
||||
* better-parse implementation of grammar defined in the ArithmeticsEvaluator.g4.
|
@ -1,10 +1,11 @@
|
||||
package kscience.kmath.asm
|
||||
package space.kscience.kmath.asm
|
||||
|
||||
import kscience.kmath.ast.*
|
||||
import kscience.kmath.complex.*
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.ByteRing
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.*
|
||||
import space.kscience.kmath.complex.ComplexField
|
||||
import space.kscience.kmath.complex.toComplex
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.ByteRing
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
@ -21,7 +22,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
),
|
||||
|
||||
number(1)
|
||||
) + symbol("x") + zero
|
||||
) + bindSymbol("x") + zero
|
||||
}("x" to MST.Numeric(2))
|
||||
|
||||
val res2 = MstSpace.mstInSpace {
|
||||
@ -34,7 +35,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
),
|
||||
|
||||
number(1)
|
||||
) + symbol("x") + zero
|
||||
) + bindSymbol("x") + zero
|
||||
}.compile()("x" to MST.Numeric(2))
|
||||
|
||||
assertEquals(res1, res2)
|
||||
@ -45,7 +46,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
val res1 = ByteRing.mstInRing {
|
||||
binaryOperationFunction("+")(
|
||||
unaryOperationFunction("+")(
|
||||
(symbol("x") - (2.toByte() + (multiply(
|
||||
(bindSymbol("x") - (2.toByte() + (multiply(
|
||||
add(number(1), number(1)),
|
||||
2
|
||||
) + 1.toByte()))) * 3.0 - 1.toByte()
|
||||
@ -58,7 +59,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
val res2 = ByteRing.mstInRing {
|
||||
binaryOperationFunction("+")(
|
||||
unaryOperationFunction("+")(
|
||||
(symbol("x") - (2.toByte() + (multiply(
|
||||
(bindSymbol("x") - (2.toByte() + (multiply(
|
||||
add(number(1), number(1)),
|
||||
2
|
||||
) + 1.toByte()))) * 3.0 - 1.toByte()
|
||||
@ -74,7 +75,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
fun realField() {
|
||||
val res1 = RealField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -82,7 +83,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
|
||||
val res2 = RealField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -95,7 +96,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
fun complexField() {
|
||||
val res1 = ComplexField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
||||
@ -103,7 +104,7 @@ internal class TestAsmConsistencyWithInterpreter {
|
||||
|
||||
val res2 = ComplexField.mstInField {
|
||||
+(3 - 2 + 2 * number(1) + 1.0) + binaryOperationFunction("+")(
|
||||
(3.0 - (symbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
(3.0 - (bindSymbol("x") + (multiply(add(number(1.0), number(1.0)), 2) + 1.0))) * 3 - 1.0
|
||||
+ number(1),
|
||||
number(1) / 2 + number(2.0) * one
|
||||
) + zero
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.asm
|
||||
package space.kscience.kmath.asm
|
||||
|
||||
import kscience.kmath.ast.mstInExtendedField
|
||||
import kscience.kmath.ast.mstInField
|
||||
import kscience.kmath.ast.mstInSpace
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.mstInExtendedField
|
||||
import space.kscience.kmath.ast.mstInField
|
||||
import space.kscience.kmath.ast.mstInSpace
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.random.Random
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
@ -12,27 +12,27 @@ import kotlin.test.assertEquals
|
||||
internal class TestAsmOperationsSupport {
|
||||
@Test
|
||||
fun testUnaryOperationInvocation() {
|
||||
val expression = RealField.mstInSpace { -symbol("x") }.compile()
|
||||
val expression = RealField.mstInSpace { -bindSymbol("x") }.compile()
|
||||
val res = expression("x" to 2.0)
|
||||
assertEquals(-2.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testBinaryOperationInvocation() {
|
||||
val expression = RealField.mstInSpace { -symbol("x") + number(1.0) }.compile()
|
||||
val expression = RealField.mstInSpace { -bindSymbol("x") + number(1.0) }.compile()
|
||||
val res = expression("x" to 2.0)
|
||||
assertEquals(-1.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testConstProductInvocation() {
|
||||
val res = RealField.mstInField { symbol("x") * 2 }("x" to 2.0)
|
||||
val res = RealField.mstInField { bindSymbol("x") * 2 }("x" to 2.0)
|
||||
assertEquals(4.0, res)
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testMultipleCalls() {
|
||||
val e = RealField.mstInExtendedField { sin(symbol("x")).pow(4) - 6 * symbol("x") / tanh(symbol("x")) }.compile()
|
||||
val e = RealField.mstInExtendedField { sin(bindSymbol("x")).pow(4) - 6 * bindSymbol("x") / tanh(bindSymbol("x")) }.compile()
|
||||
val r = Random(0)
|
||||
var s = 0.0
|
||||
repeat(1000000) { s += e("x" to r.nextDouble()) }
|
@ -1,52 +1,52 @@
|
||||
package kscience.kmath.asm
|
||||
package space.kscience.kmath.asm
|
||||
|
||||
import kscience.kmath.ast.mstInField
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.ast.mstInField
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
internal class TestAsmSpecialization {
|
||||
@Test
|
||||
fun testUnaryPlus() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("+")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("+")(bindSymbol("x")) }.compile()
|
||||
assertEquals(2.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testUnaryMinus() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("-")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("-")(bindSymbol("x")) }.compile()
|
||||
assertEquals(-2.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testAdd() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("+")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("+")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(4.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testSine() {
|
||||
val expr = RealField.mstInField { unaryOperationFunction("sin")(symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { unaryOperationFunction("sin")(bindSymbol("x")) }.compile()
|
||||
assertEquals(0.0, expr("x" to 0.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testMinus() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("-")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("-")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(0.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testDivide() {
|
||||
val expr = RealField.mstInField { binaryOperationFunction("/")(symbol("x"), symbol("x")) }.compile()
|
||||
val expr = RealField.mstInField { binaryOperationFunction("/")(bindSymbol("x"), bindSymbol("x")) }.compile()
|
||||
assertEquals(1.0, expr("x" to 2.0))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testPower() {
|
||||
val expr = RealField
|
||||
.mstInField { binaryOperationFunction("pow")(symbol("x"), number(2)) }
|
||||
.mstInField { binaryOperationFunction("pow")(bindSymbol("x"), number(2)) }
|
||||
.compile()
|
||||
|
||||
assertEquals(4.0, expr("x" to 2.0))
|
@ -1,8 +1,8 @@
|
||||
package kscience.kmath.asm
|
||||
package space.kscience.kmath.asm
|
||||
|
||||
import kscience.kmath.ast.mstInRing
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.ByteRing
|
||||
import space.kscience.kmath.ast.mstInRing
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.ByteRing
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
import kotlin.test.assertFailsWith
|
||||
@ -10,13 +10,13 @@ import kotlin.test.assertFailsWith
|
||||
internal class TestAsmVariables {
|
||||
@Test
|
||||
fun testVariable() {
|
||||
val expr = ByteRing.mstInRing { symbol("x") }.compile()
|
||||
val expr = ByteRing.mstInRing { bindSymbol("x") }.compile()
|
||||
assertEquals(1.toByte(), expr("x" to 1.toByte()))
|
||||
}
|
||||
|
||||
@Test
|
||||
fun testUndefinedVariableFails() {
|
||||
val expr = ByteRing.mstInRing { symbol("x") }.compile()
|
||||
val expr = ByteRing.mstInRing { bindSymbol("x") }.compile()
|
||||
assertFailsWith<NoSuchElementException> { expr() }
|
||||
}
|
||||
}
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import kscience.kmath.operations.Field
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.operations.Field
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.ast
|
||||
package space.kscience.kmath.ast
|
||||
|
||||
import kscience.kmath.complex.Complex
|
||||
import kscience.kmath.complex.ComplexField
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.operations.Algebra
|
||||
import kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.complex.Complex
|
||||
import space.kscience.kmath.complex.ComplexField
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.operations.Algebra
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
@ -40,7 +40,7 @@ internal class ParserTest {
|
||||
@Test
|
||||
fun `evaluate MST with binary function`() {
|
||||
val magicalAlgebra = object : Algebra<String> {
|
||||
override fun symbol(value: String): String = value
|
||||
override fun bindSymbol(value: String): String = value
|
||||
|
||||
override fun unaryOperationFunction(operation: String): (arg: String) -> String {
|
||||
throw NotImplementedError()
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.commons.expressions
|
||||
package space.kscience.kmath.commons.expressions
|
||||
|
||||
import kscience.kmath.expressions.*
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.operations.ExtendedField
|
||||
import kscience.kmath.operations.RingWithNumbers
|
||||
import org.apache.commons.math3.analysis.differentiation.DerivativeStructure
|
||||
import space.kscience.kmath.expressions.*
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.operations.ExtendedField
|
||||
import space.kscience.kmath.operations.RingWithNumbers
|
||||
|
||||
/**
|
||||
* A field over commons-math [DerivativeStructure].
|
||||
@ -48,11 +48,11 @@ public class DerivativeStructureField(
|
||||
|
||||
override fun const(value: Double): DerivativeStructure = DerivativeStructure(numberOfVariables, order, value)
|
||||
|
||||
public override fun bindOrNull(symbol: Symbol): DerivativeStructureSymbol? = variables[symbol.identity]
|
||||
public override fun bindSymbolOrNull(symbol: Symbol): DerivativeStructureSymbol? = variables[symbol.identity]
|
||||
|
||||
public fun bind(symbol: Symbol): DerivativeStructureSymbol = variables.getValue(symbol.identity)
|
||||
|
||||
override fun symbol(value: String): DerivativeStructureSymbol = bind(StringSymbol(value))
|
||||
override fun bindSymbol(value: String): DerivativeStructureSymbol = bind(StringSymbol(value))
|
||||
|
||||
public fun DerivativeStructure.derivative(symbols: List<Symbol>): Double {
|
||||
require(symbols.size <= order) { "The order of derivative ${symbols.size} exceeds computed order $order" }
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.commons.linear
|
||||
package space.kscience.kmath.commons.linear
|
||||
|
||||
import kscience.kmath.linear.*
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.structures.RealBuffer
|
||||
import org.apache.commons.math3.linear.*
|
||||
import space.kscience.kmath.linear.*
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.structures.RealBuffer
|
||||
import kotlin.reflect.KClass
|
||||
import kotlin.reflect.cast
|
||||
|
@ -1,8 +1,8 @@
|
||||
package kscience.kmath.commons.linear
|
||||
package space.kscience.kmath.commons.linear
|
||||
|
||||
import kscience.kmath.linear.Matrix
|
||||
import kscience.kmath.linear.Point
|
||||
import org.apache.commons.math3.linear.*
|
||||
import space.kscience.kmath.linear.Matrix
|
||||
import space.kscience.kmath.linear.Point
|
||||
|
||||
public enum class CMDecomposition {
|
||||
LUP,
|
@ -1,10 +1,5 @@
|
||||
package kscience.kmath.commons.optimization
|
||||
package space.kscience.kmath.commons.optimization
|
||||
|
||||
import kscience.kmath.expressions.*
|
||||
import kscience.kmath.stat.OptimizationFeature
|
||||
import kscience.kmath.stat.OptimizationProblem
|
||||
import kscience.kmath.stat.OptimizationProblemFactory
|
||||
import kscience.kmath.stat.OptimizationResult
|
||||
import org.apache.commons.math3.optim.*
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.GoalType
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.MultivariateOptimizer
|
||||
@ -14,6 +9,11 @@ import org.apache.commons.math3.optim.nonlinear.scalar.gradient.NonLinearConjuga
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.noderiv.AbstractSimplex
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.noderiv.NelderMeadSimplex
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.noderiv.SimplexOptimizer
|
||||
import space.kscience.kmath.expressions.*
|
||||
import space.kscience.kmath.stat.OptimizationFeature
|
||||
import space.kscience.kmath.stat.OptimizationProblem
|
||||
import space.kscience.kmath.stat.OptimizationProblemFactory
|
||||
import space.kscience.kmath.stat.OptimizationResult
|
||||
import kotlin.reflect.KClass
|
||||
|
||||
public operator fun PointValuePair.component1(): DoubleArray = point
|
@ -1,16 +1,16 @@
|
||||
package kscience.kmath.commons.optimization
|
||||
package space.kscience.kmath.commons.optimization
|
||||
|
||||
import kscience.kmath.commons.expressions.DerivativeStructureField
|
||||
import kscience.kmath.expressions.DifferentiableExpression
|
||||
import kscience.kmath.expressions.Expression
|
||||
import kscience.kmath.expressions.Symbol
|
||||
import kscience.kmath.stat.Fitting
|
||||
import kscience.kmath.stat.OptimizationResult
|
||||
import kscience.kmath.stat.optimizeWith
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.asBuffer
|
||||
import org.apache.commons.math3.analysis.differentiation.DerivativeStructure
|
||||
import org.apache.commons.math3.optim.nonlinear.scalar.GoalType
|
||||
import space.kscience.kmath.commons.expressions.DerivativeStructureField
|
||||
import space.kscience.kmath.expressions.DifferentiableExpression
|
||||
import space.kscience.kmath.expressions.Expression
|
||||
import space.kscience.kmath.expressions.Symbol
|
||||
import space.kscience.kmath.stat.Fitting
|
||||
import space.kscience.kmath.stat.OptimizationResult
|
||||
import space.kscience.kmath.stat.optimizeWith
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.asBuffer
|
||||
|
||||
/**
|
||||
* Generate a chi squared expression from given x-y-sigma data and inline model. Provides automatic differentiation
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.commons.random
|
||||
package space.kscience.kmath.commons.random
|
||||
|
||||
import kscience.kmath.stat.RandomGenerator
|
||||
import space.kscience.kmath.stat.RandomGenerator
|
||||
|
||||
public class CMRandomGeneratorWrapper(
|
||||
public val factory: (IntArray) -> RandomGenerator,
|
@ -1,13 +1,13 @@
|
||||
package kscience.kmath.commons.transform
|
||||
package space.kscience.kmath.commons.transform
|
||||
|
||||
import kotlinx.coroutines.FlowPreview
|
||||
import kotlinx.coroutines.flow.Flow
|
||||
import kotlinx.coroutines.flow.map
|
||||
import kscience.kmath.complex.*
|
||||
import kscience.kmath.streaming.chunked
|
||||
import kscience.kmath.streaming.spread
|
||||
import kscience.kmath.structures.*
|
||||
import org.apache.commons.math3.transform.*
|
||||
import space.kscience.kmath.complex.Complex
|
||||
import space.kscience.kmath.streaming.chunked
|
||||
import space.kscience.kmath.streaming.spread
|
||||
import space.kscience.kmath.structures.*
|
||||
|
||||
|
||||
/**
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.commons.expressions
|
||||
package space.kscience.kmath.commons.expressions
|
||||
|
||||
import kscience.kmath.expressions.*
|
||||
import space.kscience.kmath.expressions.*
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
import kotlin.test.Test
|
||||
@ -24,7 +24,7 @@ internal class AutoDiffTest {
|
||||
fun derivativeStructureFieldTest() {
|
||||
diff(2, x to 1.0, y to 1.0) {
|
||||
val x = bind(x)//by binding()
|
||||
val y = symbol("y")
|
||||
val y = bindSymbol("y")
|
||||
val z = x * (-sin(x * y) + y) + 2.0
|
||||
println(z.derivative(x))
|
||||
println(z.derivative(y,x))
|
@ -1,12 +1,12 @@
|
||||
package kscience.kmath.commons.optimization
|
||||
package space.kscience.kmath.commons.optimization
|
||||
|
||||
import kscience.kmath.commons.expressions.DerivativeStructureExpression
|
||||
import kscience.kmath.expressions.symbol
|
||||
import kscience.kmath.stat.Distribution
|
||||
import kscience.kmath.stat.Fitting
|
||||
import kscience.kmath.stat.RandomGenerator
|
||||
import kscience.kmath.stat.normal
|
||||
import org.junit.jupiter.api.Test
|
||||
import space.kscience.kmath.commons.expressions.DerivativeStructureExpression
|
||||
import space.kscience.kmath.expressions.symbol
|
||||
import space.kscience.kmath.stat.Distribution
|
||||
import space.kscience.kmath.stat.Fitting
|
||||
import space.kscience.kmath.stat.RandomGenerator
|
||||
import space.kscience.kmath.stat.normal
|
||||
import kotlin.math.pow
|
||||
|
||||
internal class OptimizeTest {
|
||||
@ -56,7 +56,7 @@ internal class OptimizeTest {
|
||||
val yErr = List(x.size) { sigma }
|
||||
|
||||
val chi2 = Fitting.chiSquared(x, y, yErr) { x1 ->
|
||||
val cWithDefault = bindOrNull(c) ?: one
|
||||
val cWithDefault = bindSymbolOrNull(c) ?: one
|
||||
bind(a) * x1.pow(2) + bind(b) * x1 + cWithDefault
|
||||
}
|
||||
|
@ -1,16 +1,16 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.memory.MemoryReader
|
||||
import kscience.kmath.memory.MemorySpec
|
||||
import kscience.kmath.memory.MemoryWriter
|
||||
import kscience.kmath.operations.ExtendedField
|
||||
import kscience.kmath.operations.FieldElement
|
||||
import kscience.kmath.operations.Norm
|
||||
import kscience.kmath.operations.RingWithNumbers
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.MemoryBuffer
|
||||
import kscience.kmath.structures.MutableBuffer
|
||||
import kscience.kmath.structures.MutableMemoryBuffer
|
||||
import space.kscience.kmath.memory.MemoryReader
|
||||
import space.kscience.kmath.memory.MemorySpec
|
||||
import space.kscience.kmath.memory.MemoryWriter
|
||||
import space.kscience.kmath.operations.ExtendedField
|
||||
import space.kscience.kmath.operations.FieldElement
|
||||
import space.kscience.kmath.operations.Norm
|
||||
import space.kscience.kmath.operations.RingWithNumbers
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.MemoryBuffer
|
||||
import space.kscience.kmath.structures.MutableBuffer
|
||||
import space.kscience.kmath.structures.MutableMemoryBuffer
|
||||
import kotlin.math.*
|
||||
|
||||
/**
|
||||
@ -157,7 +157,7 @@ public object ComplexField : ExtendedField<Complex>, Norm<Complex, Complex>, Rin
|
||||
|
||||
public override fun norm(arg: Complex): Complex = sqrt(arg.conjugate * arg)
|
||||
|
||||
public override fun symbol(value: String): Complex = if (value == "i") i else super<ExtendedField>.symbol(value)
|
||||
public override fun bindSymbol(value: String): Complex = if (value == "i") i else super<ExtendedField>.bindSymbol(value)
|
||||
}
|
||||
|
||||
/**
|
@ -1,12 +1,13 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.nd.BufferedNDField
|
||||
import kscience.kmath.nd.NDAlgebra
|
||||
import kscience.kmath.nd.NDBuffer
|
||||
import kscience.kmath.nd.NDStructure
|
||||
import kscience.kmath.operations.*
|
||||
import kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.nd.BufferedNDField
|
||||
import space.kscience.kmath.nd.NDAlgebra
|
||||
import space.kscience.kmath.nd.NDBuffer
|
||||
import space.kscience.kmath.nd.NDStructure
|
||||
import space.kscience.kmath.operations.ExtendedField
|
||||
import space.kscience.kmath.operations.RingWithNumbers
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
@ -1,13 +1,13 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.memory.MemoryReader
|
||||
import kscience.kmath.memory.MemorySpec
|
||||
import kscience.kmath.memory.MemoryWriter
|
||||
import kscience.kmath.operations.*
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.MemoryBuffer
|
||||
import kscience.kmath.structures.MutableBuffer
|
||||
import kscience.kmath.structures.MutableMemoryBuffer
|
||||
import space.kscience.kmath.memory.MemoryReader
|
||||
import space.kscience.kmath.memory.MemorySpec
|
||||
import space.kscience.kmath.memory.MemoryWriter
|
||||
import space.kscience.kmath.operations.*
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.MemoryBuffer
|
||||
import space.kscience.kmath.structures.MutableBuffer
|
||||
import space.kscience.kmath.structures.MutableMemoryBuffer
|
||||
import kotlin.math.*
|
||||
|
||||
/**
|
||||
@ -165,11 +165,11 @@ public object QuaternionField : Field<Quaternion>, Norm<Quaternion, Quaternion>,
|
||||
public override fun Quaternion.unaryMinus(): Quaternion = Quaternion(-w, -x, -y, -z)
|
||||
public override fun norm(arg: Quaternion): Quaternion = sqrt(arg.conjugate * arg)
|
||||
|
||||
public override fun symbol(value: String): Quaternion = when (value) {
|
||||
public override fun bindSymbol(value: String): Quaternion = when (value) {
|
||||
"i" -> i
|
||||
"j" -> j
|
||||
"k" -> k
|
||||
else -> super<Field>.symbol(value)
|
||||
else -> super<Field>.bindSymbol(value)
|
||||
}
|
||||
}
|
||||
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.math.PI
|
||||
import kotlin.math.abs
|
||||
import kotlin.test.Test
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.math.sqrt
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.expressions.FunctionalExpressionField
|
||||
import kscience.kmath.expressions.bind
|
||||
import kscience.kmath.expressions.invoke
|
||||
import kscience.kmath.expressions.symbol
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.expressions.FunctionalExpressionField
|
||||
import space.kscience.kmath.expressions.bindSymbol
|
||||
import space.kscience.kmath.expressions.invoke
|
||||
import space.kscience.kmath.expressions.symbol
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
||||
@ -16,7 +16,7 @@ internal class ExpressionFieldForComplexTest {
|
||||
val context = FunctionalExpressionField(ComplexField)
|
||||
|
||||
val expression = context {
|
||||
val x = bind(x)
|
||||
val x = bindSymbol(x)
|
||||
x * x + 2 * x + one
|
||||
}
|
||||
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.complex
|
||||
package space.kscience.kmath.complex
|
||||
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.test.Test
|
||||
import kotlin.test.assertEquals
|
||||
|
File diff suppressed because it is too large
Load Diff
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.domains
|
||||
package space.kscience.kmath.domains
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.linear.Point
|
||||
|
||||
/**
|
||||
* A simple geometric domain.
|
@ -13,11 +13,11 @@
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package kscience.kmath.domains
|
||||
package space.kscience.kmath.domains
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import kscience.kmath.structures.RealBuffer
|
||||
import kscience.kmath.structures.indices
|
||||
import space.kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.structures.RealBuffer
|
||||
import space.kscience.kmath.structures.indices
|
||||
|
||||
/**
|
||||
*
|
@ -13,9 +13,9 @@
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package kscience.kmath.domains
|
||||
package space.kscience.kmath.domains
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.linear.Point
|
||||
|
||||
/**
|
||||
* n-dimensional volume
|
@ -13,9 +13,9 @@
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package kscience.kmath.domains
|
||||
package space.kscience.kmath.domains
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.linear.Point
|
||||
|
||||
public class UnconstrainedDomain(public override val dimension: Int) : RealDomain {
|
||||
public override operator fun contains(point: Point<Double>): Boolean = true
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.domains
|
||||
package space.kscience.kmath.domains
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import kscience.kmath.structures.asBuffer
|
||||
import space.kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.structures.asBuffer
|
||||
|
||||
public inline class UnivariateDomain(public val range: ClosedFloatingPointRange<Double>) : RealDomain {
|
||||
public override val dimension: Int
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
/**
|
||||
* Represents expression which structure can be differentiated.
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
import kscience.kmath.operations.Algebra
|
||||
import space.kscience.kmath.operations.Algebra
|
||||
import kotlin.jvm.JvmName
|
||||
import kotlin.properties.ReadOnlyProperty
|
||||
|
||||
@ -73,12 +73,12 @@ public interface ExpressionAlgebra<in T, E> : Algebra<E> {
|
||||
/**
|
||||
* Bind a given [Symbol] to this context variable and produce context-specific object. Return null if symbol could not be bound in current context.
|
||||
*/
|
||||
public fun bindOrNull(symbol: Symbol): E?
|
||||
public fun bindSymbolOrNull(symbol: Symbol): E?
|
||||
|
||||
/**
|
||||
* Bind a string to a context using [StringSymbol]
|
||||
*/
|
||||
override fun symbol(value: String): E = bind(StringSymbol(value))
|
||||
override fun bindSymbol(value: String): E = bindSymbol(StringSymbol(value))
|
||||
|
||||
/**
|
||||
* A constant expression which does not depend on arguments
|
||||
@ -89,8 +89,8 @@ public interface ExpressionAlgebra<in T, E> : Algebra<E> {
|
||||
/**
|
||||
* Bind a given [Symbol] to this context variable and produce context-specific object.
|
||||
*/
|
||||
public fun <T, E> ExpressionAlgebra<T, E>.bind(symbol: Symbol): E =
|
||||
bindOrNull(symbol) ?: error("Symbol $symbol could not be bound to $this")
|
||||
public fun <T, E> ExpressionAlgebra<T, E>.bindSymbol(symbol: Symbol): E =
|
||||
bindSymbolOrNull(symbol) ?: error("Symbol $symbol could not be bound to $this")
|
||||
|
||||
/**
|
||||
* A delegate to create a symbol with a string identity in this scope
|
||||
@ -103,5 +103,5 @@ public val symbol: ReadOnlyProperty<Any?, Symbol> = ReadOnlyProperty { _, prope
|
||||
* Bind a symbol by name inside the [ExpressionAlgebra]
|
||||
*/
|
||||
public fun <T, E> ExpressionAlgebra<T, E>.binding(): ReadOnlyProperty<Any?, E> = ReadOnlyProperty { _, property ->
|
||||
bind(StringSymbol(property.name)) ?: error("A variable with name ${property.name} does not exist")
|
||||
bindSymbol(StringSymbol(property.name)) ?: error("A variable with name ${property.name} does not exist")
|
||||
}
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
import kscience.kmath.operations.*
|
||||
import space.kscience.kmath.operations.*
|
||||
|
||||
/**
|
||||
* A context class for [Expression] construction.
|
||||
@ -18,7 +18,7 @@ public abstract class FunctionalExpressionAlgebra<T, A : Algebra<T>>(
|
||||
/**
|
||||
* Builds an Expression to access a variable.
|
||||
*/
|
||||
public override fun bindOrNull(symbol: Symbol): Expression<T>? = Expression { arguments ->
|
||||
public override fun bindSymbolOrNull(symbol: Symbol): Expression<T>? = Expression { arguments ->
|
||||
arguments[symbol] ?: error("Argument not found: $symbol")
|
||||
}
|
||||
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.operations.*
|
||||
import kscience.kmath.structures.asBuffer
|
||||
import space.kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.operations.*
|
||||
import space.kscience.kmath.structures.asBuffer
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
||||
@ -117,7 +117,7 @@ public open class SimpleAutoDiffField<T : Any, F : Field<T>>(
|
||||
override fun hashCode(): Int = identity.hashCode()
|
||||
}
|
||||
|
||||
public override fun bindOrNull(symbol: Symbol): AutoDiffValue<T>? = bindings[symbol.identity]
|
||||
public override fun bindSymbolOrNull(symbol: Symbol): AutoDiffValue<T>? = bindings[symbol.identity]
|
||||
|
||||
private fun getDerivative(variable: AutoDiffValue<T>): T =
|
||||
(variable as? AutoDiffVariableWithDerivative)?.d ?: derivatives[variable] ?: context.zero
|
@ -1,12 +1,12 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
import kscience.kmath.linear.Point
|
||||
import kscience.kmath.nd.Structure2D
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.linear.Point
|
||||
import space.kscience.kmath.nd.Structure2D
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
|
||||
/**
|
||||
* An environment to easy transform indexed variables to symbols and back.
|
||||
* TODO requires multi-receivers to be beutiful
|
||||
* TODO requires multi-receivers to be beautiful
|
||||
*/
|
||||
public interface SymbolIndexer {
|
||||
public val symbols: List<Symbol>
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.expressions
|
||||
package space.kscience.kmath.expressions
|
||||
|
||||
import kscience.kmath.operations.ExtendedField
|
||||
import kscience.kmath.operations.Field
|
||||
import kscience.kmath.operations.Ring
|
||||
import kscience.kmath.operations.Space
|
||||
import space.kscience.kmath.operations.ExtendedField
|
||||
import space.kscience.kmath.operations.Field
|
||||
import space.kscience.kmath.operations.Ring
|
||||
import space.kscience.kmath.operations.Space
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
@ -1,12 +1,12 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.nd.NDStructure
|
||||
import kscience.kmath.nd.Structure2D
|
||||
import kscience.kmath.operations.Ring
|
||||
import kscience.kmath.operations.invoke
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import kscience.kmath.structures.asSequence
|
||||
import space.kscience.kmath.nd.NDStructure
|
||||
import space.kscience.kmath.nd.Structure2D
|
||||
import space.kscience.kmath.operations.Ring
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.structures.asSequence
|
||||
|
||||
/**
|
||||
* Alias for [Structure2D] with more familiar name.
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.VirtualBuffer
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.VirtualBuffer
|
||||
|
||||
public typealias Point<T> = Buffer<T>
|
||||
|
@ -1,9 +1,12 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.nd.getFeature
|
||||
import kscience.kmath.operations.*
|
||||
import kscience.kmath.structures.*
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.nd.getFeature
|
||||
import space.kscience.kmath.operations.*
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferAccessor2D
|
||||
import space.kscience.kmath.structures.MutableBuffer
|
||||
import space.kscience.kmath.structures.MutableBufferFactory
|
||||
|
||||
/**
|
||||
* Common implementation of [LupDecompositionFeature].
|
@ -1,9 +1,9 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.nd.Structure2D
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import kscience.kmath.structures.asBuffer
|
||||
import space.kscience.kmath.nd.Structure2D
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.structures.asBuffer
|
||||
|
||||
public class MatrixBuilder(public val rows: Int, public val columns: Int) {
|
||||
public operator fun <T : Any> invoke(vararg elements: T): Matrix<T> {
|
@ -1,12 +1,12 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.operations.Ring
|
||||
import kscience.kmath.operations.SpaceOperations
|
||||
import kscience.kmath.operations.invoke
|
||||
import kscience.kmath.operations.sum
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import kscience.kmath.structures.asSequence
|
||||
import space.kscience.kmath.operations.Ring
|
||||
import space.kscience.kmath.operations.SpaceOperations
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.operations.sum
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.structures.asSequence
|
||||
|
||||
/**
|
||||
* Basic operations on matrices. Operates on [Matrix].
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
/**
|
||||
* A marker interface representing some properties of matrices or additional transformations of them. Features are used
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.misc.UnstableKMathAPI
|
||||
import kscience.kmath.nd.Structure2D
|
||||
import kscience.kmath.nd.getFeature
|
||||
import kscience.kmath.operations.Ring
|
||||
import kscience.kmath.structures.asBuffer
|
||||
import space.kscience.kmath.misc.UnstableKMathAPI
|
||||
import space.kscience.kmath.nd.Structure2D
|
||||
import space.kscience.kmath.nd.getFeature
|
||||
import space.kscience.kmath.operations.Ring
|
||||
import space.kscience.kmath.structures.asBuffer
|
||||
import kotlin.math.sqrt
|
||||
import kotlin.reflect.KClass
|
||||
import kotlin.reflect.safeCast
|
@ -1,6 +1,6 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.structures.RealBuffer
|
||||
import space.kscience.kmath.structures.RealBuffer
|
||||
|
||||
public object RealMatrixContext : MatrixContext<Double, BufferMatrix<Double>> {
|
||||
|
@ -1,10 +1,10 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
import kscience.kmath.operations.RealField
|
||||
import kscience.kmath.operations.Space
|
||||
import kscience.kmath.operations.invoke
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.operations.Space
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
|
||||
/**
|
||||
* A linear space for vectors.
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.linear
|
||||
package space.kscience.kmath.linear
|
||||
|
||||
/**
|
||||
* The matrix where each element is evaluated each time when is being accessed.
|
@ -1,4 +1,4 @@
|
||||
package kscience.kmath.misc
|
||||
package space.kscience.kmath.misc
|
||||
|
||||
@RequiresOptIn("This API is unstable and could change in future", RequiresOptIn.Level.WARNING)
|
||||
public annotation class UnstableKMathAPI
|
@ -1,7 +1,7 @@
|
||||
package kscience.kmath.misc
|
||||
package space.kscience.kmath.misc
|
||||
|
||||
import kscience.kmath.operations.Space
|
||||
import kscience.kmath.operations.invoke
|
||||
import space.kscience.kmath.operations.Space
|
||||
import space.kscience.kmath.operations.invoke
|
||||
import kotlin.jvm.JvmName
|
||||
|
||||
/**
|
@ -1,9 +1,11 @@
|
||||
package kscience.kmath.nd
|
||||
package space.kscience.kmath.nd
|
||||
|
||||
import kscience.kmath.nd.*
|
||||
import kscience.kmath.operations.*
|
||||
import kscience.kmath.structures.Buffer
|
||||
import kscience.kmath.structures.BufferFactory
|
||||
import space.kscience.kmath.operations.Field
|
||||
import space.kscience.kmath.operations.RealField
|
||||
import space.kscience.kmath.operations.Ring
|
||||
import space.kscience.kmath.operations.Space
|
||||
import space.kscience.kmath.structures.Buffer
|
||||
import space.kscience.kmath.structures.BufferFactory
|
||||
import kotlin.contracts.InvocationKind
|
||||
import kotlin.contracts.contract
|
||||
|
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Reference in New Issue
Block a user