forked from kscience/kmath
Fixes to tests and lazy structures
This commit is contained in:
parent
c0a43c1bd1
commit
600d8a64b8
@ -5,6 +5,7 @@ plugins {
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}
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}
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dependencies {
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dependencies {
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compile project(':kmath-core')
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compile project(":kmath-core")
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compile project(":kmath-coroutines")
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//jmh project(':kmath-core')
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//jmh project(':kmath-core')
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}
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}
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@ -1,15 +1,16 @@
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package scientifik.kmath.structures
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package scientifik.kmath.structures
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.RealField
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import kotlin.system.measureTimeMillis
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import kotlin.system.measureTimeMillis
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fun main(args: Array<String>) {
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fun main(args: Array<String>) {
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val dim = 1000
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val dim = 1000
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val n = 10000
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val n = 100
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val bufferedField = NDField.buffered(intArrayOf(dim, dim), DoubleField)
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val bufferedField = NDField.buffered(intArrayOf(dim, dim), RealField)
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val specializedField = NDField.real(intArrayOf(dim, dim))
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val specializedField = NDField.real(intArrayOf(dim, dim))
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val genericField = NDField.generic(intArrayOf(dim, dim), DoubleField)
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val genericField = NDField.generic(intArrayOf(dim, dim), RealField)
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val lazyNDField = NDField.lazy(intArrayOf(dim, dim), RealField)
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// val action: NDField<Double, DoubleField, NDStructure<Double>>.() -> Unit = {
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// val action: NDField<Double, DoubleField, NDStructure<Double>>.() -> Unit = {
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// var res = one
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// var res = one
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@ -55,6 +56,23 @@ fun main(args: Array<String>) {
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println("Specialized addition completed in $specializedTime millis")
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println("Specialized addition completed in $specializedTime millis")
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val lazyTime = measureTimeMillis {
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val tr : RealField.(Double)->Double = {arg->
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var r = arg
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repeat(n) {
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r += 1.0
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}
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r
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}
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lazyNDField.run {
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val res = one.map(tr)
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res.elements().sumByDouble { it.second }
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}
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}
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println("Lazy addition completed in $lazyTime millis")
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val genericTime = measureTimeMillis {
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val genericTime = measureTimeMillis {
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//genericField.run(action)
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//genericField.run(action)
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genericField.run {
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genericField.run {
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@ -42,7 +42,7 @@ class PhantomBin<T : Comparable<T>>(val template: BinTemplate<T>, override val v
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/**
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/**
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* Immutable histogram with explicit structure for content and additional external bin description.
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* Immutable histogram with explicit structure for content and additional external bin description.
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* Bin search is slow, but full histogram algebra is supported.
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* Bin search is slow, but full histogram algebra is supported.
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* @param bins map a template into structure index
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* @param bins transform a template into structure index
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*/
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*/
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class PhantomHistogram<T : Comparable<T>>(
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class PhantomHistogram<T : Comparable<T>>(
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val bins: Map<BinTemplate<T>, IntArray>,
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val bins: Map<BinTemplate<T>, IntArray>,
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@ -1,7 +1,7 @@
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package scientifik.kmath.linear
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package scientifik.kmath.linear
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.RealField
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import scientifik.kmath.structures.*
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import scientifik.kmath.structures.*
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import kotlin.math.absoluteValue
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import kotlin.math.absoluteValue
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@ -184,7 +184,7 @@ abstract class LUDecomposition<T : Comparable<T>, F : Field<T>>(val matrix: Matr
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}
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}
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class RealLUDecomposition(matrix: RealMatrix, private val singularityThreshold: Double = DEFAULT_TOO_SMALL) :
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class RealLUDecomposition(matrix: RealMatrix, private val singularityThreshold: Double = DEFAULT_TOO_SMALL) :
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LUDecomposition<Double, DoubleField>(matrix) {
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LUDecomposition<Double, RealField>(matrix) {
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override fun isSingular(value: Double): Boolean {
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override fun isSingular(value: Double): Boolean {
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return value.absoluteValue < singularityThreshold
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return value.absoluteValue < singularityThreshold
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}
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}
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@ -197,9 +197,9 @@ class RealLUDecomposition(matrix: RealMatrix, private val singularityThreshold:
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/** Specialized solver. */
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/** Specialized solver. */
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object RealLUSolver : LinearSolver<Double, DoubleField> {
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object RealLUSolver : LinearSolver<Double, RealField> {
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fun decompose(mat: Matrix<Double, DoubleField>, threshold: Double = 1e-11): RealLUDecomposition =
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fun decompose(mat: Matrix<Double, RealField>, threshold: Double = 1e-11): RealLUDecomposition =
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RealLUDecomposition(mat, threshold)
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RealLUDecomposition(mat, threshold)
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override fun solve(a: RealMatrix, b: RealMatrix): RealMatrix {
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override fun solve(a: RealMatrix, b: RealMatrix): RealMatrix {
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@ -1,8 +1,8 @@
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package scientifik.kmath.linear
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package scientifik.kmath.linear
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.Norm
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import scientifik.kmath.operations.Norm
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import scientifik.kmath.operations.RealField
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import scientifik.kmath.operations.Ring
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import scientifik.kmath.operations.Ring
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import scientifik.kmath.structures.asSequence
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import scientifik.kmath.structures.asSequence
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import scientifik.kmath.structures.boxingBuffer
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import scientifik.kmath.structures.boxingBuffer
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@ -61,5 +61,5 @@ object VectorL2Norm : Norm<Vector<out Number, *>, Double> {
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}
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}
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}
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}
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typealias RealVector = Vector<Double, DoubleField>
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typealias RealVector = Vector<Double, RealField>
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typealias RealMatrix = Matrix<Double, DoubleField>
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typealias RealMatrix = Matrix<Double, RealField>
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@ -1,6 +1,6 @@
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package scientifik.kmath.linear
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package scientifik.kmath.linear
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.RealField
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import scientifik.kmath.operations.Ring
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import scientifik.kmath.operations.Ring
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import scientifik.kmath.operations.Space
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import scientifik.kmath.operations.Space
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import scientifik.kmath.operations.SpaceElement
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import scientifik.kmath.operations.SpaceElement
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@ -42,8 +42,8 @@ interface MatrixSpace<T : Any, R : Ring<T>> : Space<Matrix<T, R>> {
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/**
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/**
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* Non-boxing double matrix
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* Non-boxing double matrix
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*/
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*/
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fun real(rows: Int, columns: Int): MatrixSpace<Double, DoubleField> =
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fun real(rows: Int, columns: Int): MatrixSpace<Double, RealField> =
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StructureMatrixSpace(rows, columns, DoubleField, DoubleBufferFactory)
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StructureMatrixSpace(rows, columns, RealField, DoubleBufferFactory)
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/**
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/**
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* A structured matrix with custom buffer
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* A structured matrix with custom buffer
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@ -1,6 +1,6 @@
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package scientifik.kmath.linear
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package scientifik.kmath.linear
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.RealField
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import scientifik.kmath.operations.Space
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import scientifik.kmath.operations.Space
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import scientifik.kmath.operations.SpaceElement
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import scientifik.kmath.operations.SpaceElement
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import scientifik.kmath.structures.*
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import scientifik.kmath.structures.*
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@ -34,13 +34,13 @@ interface VectorSpace<T : Any, S : Space<T>> : Space<Point<T>> {
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companion object {
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companion object {
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private val realSpaceCache = HashMap<Int, BufferVectorSpace<Double, DoubleField>>()
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private val realSpaceCache = HashMap<Int, BufferVectorSpace<Double, RealField>>()
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/**
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/**
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* Non-boxing double vector space
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* Non-boxing double vector space
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*/
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*/
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fun real(size: Int): BufferVectorSpace<Double, DoubleField> {
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fun real(size: Int): BufferVectorSpace<Double, RealField> {
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return realSpaceCache.getOrPut(size) { BufferVectorSpace(size, DoubleField, DoubleBufferFactory) }
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return realSpaceCache.getOrPut(size) { BufferVectorSpace(size, RealField, DoubleBufferFactory) }
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}
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}
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/**
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/**
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@ -79,10 +79,10 @@ interface Vector<T : Any, S : Space<T>> : SpaceElement<Point<T>, Vector<T, S>, V
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fun <T : Any, S : Space<T>> generic(size: Int, field: S, initializer: (Int) -> T): Vector<T, S> =
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fun <T : Any, S : Space<T>> generic(size: Int, field: S, initializer: (Int) -> T): Vector<T, S> =
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VectorSpace.buffered(size, field).produceElement(initializer)
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VectorSpace.buffered(size, field).produceElement(initializer)
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fun real(size: Int, initializer: (Int) -> Double): Vector<Double, DoubleField> =
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fun real(size: Int, initializer: (Int) -> Double): Vector<Double, RealField> =
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VectorSpace.real(size).produceElement(initializer)
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VectorSpace.real(size).produceElement(initializer)
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fun ofReal(vararg elements: Double): Vector<Double, DoubleField> =
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fun ofReal(vararg elements: Double): Vector<Double, RealField> =
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VectorSpace.real(elements.size).produceElement { elements[it] }
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VectorSpace.real(elements.size).produceElement { elements[it] }
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}
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}
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@ -17,12 +17,12 @@ interface ExtendedField<T : Any> :
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*
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*
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* TODO inline does not work due to compiler bug. Waiting for fix for KT-27586
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* TODO inline does not work due to compiler bug. Waiting for fix for KT-27586
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*/
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*/
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inline class Real(val value: Double) : FieldElement<Double, Real, DoubleField> {
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inline class Real(val value: Double) : FieldElement<Double, Real, RealField> {
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override fun unwrap(): Double = value
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override fun unwrap(): Double = value
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override fun Double.wrap(): Real = Real(value)
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override fun Double.wrap(): Real = Real(value)
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override val context get() = DoubleField
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override val context get() = RealField
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companion object {
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companion object {
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@ -32,7 +32,7 @@ inline class Real(val value: Double) : FieldElement<Double, Real, DoubleField> {
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/**
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/**
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* A field for double without boxing. Does not produce appropriate field element
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* A field for double without boxing. Does not produce appropriate field element
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*/
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*/
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object DoubleField : AbstractField<Double>(),ExtendedField<Double>, Norm<Double, Double> {
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object RealField : AbstractField<Double>(),ExtendedField<Double>, Norm<Double, Double> {
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override val zero: Double = 0.0
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override val zero: Double = 0.0
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override fun add(a: Double, b: Double): Double = a + b
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override fun add(a: Double, b: Double): Double = a + b
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override fun multiply(a: Double, @Suppress("PARAMETER_NAME_CHANGED_ON_OVERRIDE") b: Double): Double = a * b
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override fun multiply(a: Double, @Suppress("PARAMETER_NAME_CHANGED_ON_OVERRIDE") b: Double): Double = a * b
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@ -5,18 +5,19 @@ import scientifik.kmath.operations.FieldElement
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abstract class StridedNDField<T, F : Field<T>>(shape: IntArray, elementField: F) :
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abstract class StridedNDField<T, F : Field<T>>(shape: IntArray, elementField: F) :
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AbstractNDField<T, F, NDBuffer<T>>(shape, elementField) {
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AbstractNDField<T, F, NDBuffer<T>>(shape, elementField) {
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abstract val bufferFactory: BufferFactory<T>
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val strides = DefaultStrides(shape)
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val strides = DefaultStrides(shape)
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abstract fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T>
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}
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}
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class BufferNDField<T, F : Field<T>>(
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class BufferNDField<T, F : Field<T>>(
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shape: IntArray,
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shape: IntArray,
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elementField: F,
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elementField: F,
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override val bufferFactory: BufferFactory<T>
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val bufferFactory: BufferFactory<T>
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) :
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) : StridedNDField<T, F>(shape, elementField) {
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StridedNDField<T, F>(shape, elementField) {
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override fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T> = bufferFactory(size, initializer)
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override fun check(vararg elements: NDBuffer<T>) {
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override fun check(vararg elements: NDBuffer<T>) {
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if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides")
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if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides")
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@ -32,22 +33,25 @@ class BufferNDField<T, F : Field<T>>(
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bufferFactory(strides.linearSize) { offset -> elementField.initializer(strides.index(offset)) })
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bufferFactory(strides.linearSize) { offset -> elementField.initializer(strides.index(offset)) })
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@Suppress("OVERRIDE_BY_INLINE")
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@Suppress("OVERRIDE_BY_INLINE")
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override inline fun NDBuffer<T>.map(crossinline transform: F.(T) -> T): BufferNDElement<T, F> {
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override inline fun map(arg: NDBuffer<T>, crossinline transform: F.(T) -> T): BufferNDElement<T, F> {
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check(this)
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check(arg)
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return BufferNDElement(
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return BufferNDElement(
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this@BufferNDField,
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this,
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bufferFactory(strides.linearSize) { offset -> elementField.transform(buffer[offset]) })
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bufferFactory(arg.strides.linearSize) { offset -> elementField.transform(arg.buffer[offset]) })
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}
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}
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@Suppress("OVERRIDE_BY_INLINE")
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@Suppress("OVERRIDE_BY_INLINE")
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override inline fun NDBuffer<T>.mapIndexed(crossinline transform: F.(index: IntArray, T) -> T): BufferNDElement<T, F> {
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override inline fun mapIndexed(
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check(this)
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arg: NDBuffer<T>,
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crossinline transform: F.(index: IntArray, T) -> T
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): BufferNDElement<T, F> {
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check(arg)
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return BufferNDElement(
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return BufferNDElement(
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this@BufferNDField,
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this,
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bufferFactory(strides.linearSize) { offset ->
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bufferFactory(arg.strides.linearSize) { offset ->
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elementField.transform(
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elementField.transform(
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strides.index(offset),
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arg.strides.index(offset),
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buffer[offset]
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arg.buffer[offset]
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)
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)
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})
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})
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}
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}
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@ -105,11 +109,11 @@ class BufferNDElement<T, F : Field<T>>(override val context: StridedNDField<T, F
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override fun elements(): Sequence<Pair<IntArray, T>> =
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override fun elements(): Sequence<Pair<IntArray, T>> =
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strides.indices().map { it to get(it) }
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strides.indices().map { it to get(it) }
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override fun map(action: F.(T) -> T): BufferNDElement<T, F> =
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override fun map(action: F.(T) -> T) =
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context.run { map(action) }
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context.run { map(this@BufferNDElement, action) }.wrap()
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override fun mapIndexed(transform: F.(index: IntArray, T) -> T): BufferNDElement<T, F> =
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override fun mapIndexed(transform: F.(index: IntArray, T) -> T) =
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context.run { mapIndexed(transform) }
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context.run { mapIndexed(this@BufferNDElement, transform) }.wrap()
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}
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}
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/**
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/**
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@ -6,7 +6,7 @@ import scientifik.kmath.operations.PowerOperations
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import scientifik.kmath.operations.TrigonometricOperations
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import scientifik.kmath.operations.TrigonometricOperations
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interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<out T>> :
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interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<T>> :
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NDField<T, F, N>,
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NDField<T, F, N>,
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TrigonometricOperations<N>,
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TrigonometricOperations<N>,
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PowerOperations<N>,
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PowerOperations<N>,
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@ -16,7 +16,7 @@ interface ExtendedNDField<T : Any, F : ExtendedField<T>, N : NDStructure<out T>>
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/**
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/**
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* NDField that supports [ExtendedField] operations on its elements
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* NDField that supports [ExtendedField] operations on its elements
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*/
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*/
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class ExtendedNDFieldWrapper<T : Any, F : ExtendedField<T>, N : NDStructure<out T>>(private val ndField: NDField<T, F, N>) :
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class ExtendedNDFieldWrapper<T : Any, F : ExtendedField<T>, N : NDStructure<T>>(private val ndField: NDField<T, F, N>) :
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ExtendedNDField<T, F, N>, NDField<T, F, N> by ndField {
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ExtendedNDField<T, F, N>, NDField<T, F, N> by ndField {
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override val shape: IntArray get() = ndField.shape
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override val shape: IntArray get() = ndField.shape
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@ -1,8 +1,8 @@
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package scientifik.kmath.structures
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package scientifik.kmath.structures
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import scientifik.kmath.operations.DoubleField
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.FieldElement
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import scientifik.kmath.operations.FieldElement
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import scientifik.kmath.operations.RealField
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interface NDElement<T, F : Field<T>> : NDStructure<T> {
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interface NDElement<T, F : Field<T>> : NDStructure<T> {
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@ -17,7 +17,7 @@ object NDElements {
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/**
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/**
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* Create a optimized NDArray of doubles
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* Create a optimized NDArray of doubles
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*/
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*/
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fun real(shape: IntArray, initializer: DoubleField.(IntArray) -> Double = { 0.0 }) =
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fun real(shape: IntArray, initializer: RealField.(IntArray) -> Double = { 0.0 }) =
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NDField.real(shape).produce(initializer)
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NDField.real(shape).produce(initializer)
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@ -23,9 +23,9 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N> {
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fun produce(initializer: F.(IntArray) -> T): N
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fun produce(initializer: F.(IntArray) -> T): N
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fun N.map(transform: F.(T) -> T): N
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fun map(arg: N, transform: F.(T) -> T): N
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|
|
||||||
fun N.mapIndexed(transform: F.(index: IntArray, T) -> T): N
|
fun mapIndexed(arg: N, transform: F.(index: IntArray, T) -> T): N
|
||||||
|
|
||||||
fun combine(a: N, b: N, transform: F.(T, T) -> T): N
|
fun combine(a: N, b: N, transform: F.(T, T) -> T): N
|
||||||
|
|
||||||
@ -87,11 +87,11 @@ abstract class AbstractNDField<T, F : Field<T>, N : NDStructure<T>>(
|
|||||||
|
|
||||||
override val one: N by lazy { produce { one } }
|
override val one: N by lazy { produce { one } }
|
||||||
|
|
||||||
final override operator fun Function1<T, T>.invoke(structure: N) = structure.map { value -> this@invoke(value) }
|
final override operator fun Function1<T, T>.invoke(structure: N) = map(structure) { value -> this@invoke(value) }
|
||||||
final override operator fun N.plus(arg: T) = this.map { value -> elementField.run { arg + value } }
|
final override operator fun N.plus(arg: T) = map(this) { value -> elementField.run { arg + value } }
|
||||||
final override operator fun N.minus(arg: T) = this.map { value -> elementField.run { arg - value } }
|
final override operator fun N.minus(arg: T) = map(this) { value -> elementField.run { arg - value } }
|
||||||
final override operator fun N.times(arg: T) = this.map { value -> elementField.run { arg * value } }
|
final override operator fun N.times(arg: T) = map(this) { value -> elementField.run { arg * value } }
|
||||||
final override operator fun N.div(arg: T) = this.map { value -> elementField.run { arg / value } }
|
final override operator fun N.div(arg: T) = map(this) { value -> elementField.run { arg / value } }
|
||||||
|
|
||||||
final override operator fun T.plus(arg: N) = arg + this
|
final override operator fun T.plus(arg: N) = arg + this
|
||||||
final override operator fun T.minus(arg: N) = arg - this
|
final override operator fun T.minus(arg: N) = arg - this
|
||||||
@ -109,7 +109,7 @@ abstract class AbstractNDField<T, F : Field<T>, N : NDStructure<T>>(
|
|||||||
* Multiply all elements by cinstant
|
* Multiply all elements by cinstant
|
||||||
*/
|
*/
|
||||||
override fun multiply(a: N, k: Double): N =
|
override fun multiply(a: N, k: Double): N =
|
||||||
a.map { it * k }
|
map(a) { it * k }
|
||||||
|
|
||||||
|
|
||||||
/**
|
/**
|
||||||
@ -140,17 +140,16 @@ class GenericNDField<T : Any, F : Field<T>>(
|
|||||||
shape: IntArray,
|
shape: IntArray,
|
||||||
elementField: F,
|
elementField: F,
|
||||||
val bufferFactory: BufferFactory<T> = ::boxingBuffer
|
val bufferFactory: BufferFactory<T> = ::boxingBuffer
|
||||||
) :
|
) : AbstractNDField<T, F, NDStructure<T>>(shape, elementField) {
|
||||||
AbstractNDField<T, F, NDStructure<T>>(shape, elementField) {
|
|
||||||
|
|
||||||
override fun produce(initializer: F.(IntArray) -> T): NDStructure<T> =
|
override fun produce(initializer: F.(IntArray) -> T): NDStructure<T> =
|
||||||
ndStructure(shape, bufferFactory) { elementField.initializer(it) }
|
ndStructure(shape, bufferFactory) { elementField.initializer(it) }
|
||||||
|
|
||||||
override fun NDStructure<T>.map(transform: F.(T) -> T): NDStructure<T> =
|
override fun map(arg: NDStructure<T>, transform: F.(T) -> T): NDStructure<T> =
|
||||||
produce { index -> transform(get(index)) }
|
produce { index -> transform(arg.get(index)) }
|
||||||
|
|
||||||
override fun NDStructure<T>.mapIndexed(transform: F.(index: IntArray, T) -> T): NDStructure<T> =
|
override fun mapIndexed(arg: NDStructure<T>, transform: F.(index: IntArray, T) -> T): NDStructure<T> =
|
||||||
produce { index -> transform(index, get(index)) }
|
produce { index -> transform(index, arg.get(index)) }
|
||||||
|
|
||||||
override fun combine(a: NDStructure<T>, b: NDStructure<T>, transform: F.(T, T) -> T): NDStructure<T> =
|
override fun combine(a: NDStructure<T>, b: NDStructure<T>, transform: F.(T, T) -> T): NDStructure<T> =
|
||||||
produce { index -> transform(a[index], b[index]) }
|
produce { index -> transform(a[index], b[index]) }
|
||||||
|
@ -1,41 +1,47 @@
|
|||||||
package scientifik.kmath.structures
|
package scientifik.kmath.structures
|
||||||
|
|
||||||
import scientifik.kmath.operations.DoubleField
|
import scientifik.kmath.operations.RealField
|
||||||
|
|
||||||
typealias RealNDElement = BufferNDElement<Double, DoubleField>
|
typealias RealNDElement = BufferNDElement<Double, RealField>
|
||||||
|
|
||||||
class RealNDField(shape: IntArray) :
|
class RealNDField(shape: IntArray) :
|
||||||
StridedNDField<Double, DoubleField>(shape, DoubleField),
|
StridedNDField<Double, RealField>(shape, RealField),
|
||||||
ExtendedNDField<Double, DoubleField, NDBuffer<Double>> {
|
ExtendedNDField<Double, RealField, NDBuffer<Double>> {
|
||||||
|
|
||||||
override val bufferFactory: BufferFactory<Double>
|
override fun buildBuffer(size: Int, initializer: (Int) -> Double): Buffer<Double> =
|
||||||
get() = DoubleBufferFactory
|
DoubleBuffer(DoubleArray(size, initializer))
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* Inline map an NDStructure to
|
* Inline transform an NDStructure to
|
||||||
*/
|
*/
|
||||||
@Suppress("OVERRIDE_BY_INLINE")
|
@Suppress("OVERRIDE_BY_INLINE")
|
||||||
override inline fun NDBuffer<Double>.map(crossinline transform: DoubleField.(Double) -> Double): RealNDElement {
|
override inline fun map(
|
||||||
check(this)
|
arg: NDBuffer<Double>,
|
||||||
val array = DoubleArray(strides.linearSize) { offset -> DoubleField.transform(buffer[offset]) }
|
crossinline transform: RealField.(Double) -> Double
|
||||||
return BufferNDElement(this@RealNDField, DoubleBuffer(array))
|
): RealNDElement {
|
||||||
|
check(arg)
|
||||||
|
val array = DoubleArray(arg.strides.linearSize) { offset -> RealField.transform(arg.buffer[offset]) }
|
||||||
|
return BufferNDElement(this, DoubleBuffer(array))
|
||||||
}
|
}
|
||||||
|
|
||||||
@Suppress("OVERRIDE_BY_INLINE")
|
@Suppress("OVERRIDE_BY_INLINE")
|
||||||
override inline fun produce(crossinline initializer: DoubleField.(IntArray) -> Double): RealNDElement {
|
override inline fun produce(crossinline initializer: RealField.(IntArray) -> Double): RealNDElement {
|
||||||
val array = DoubleArray(strides.linearSize) { offset -> elementField.initializer(strides.index(offset)) }
|
val array = DoubleArray(strides.linearSize) { offset -> elementField.initializer(strides.index(offset)) }
|
||||||
return BufferNDElement(this, DoubleBuffer(array))
|
return BufferNDElement(this, DoubleBuffer(array))
|
||||||
}
|
}
|
||||||
|
|
||||||
@Suppress("OVERRIDE_BY_INLINE")
|
@Suppress("OVERRIDE_BY_INLINE")
|
||||||
override inline fun NDBuffer<Double>.mapIndexed(crossinline transform: DoubleField.(index: IntArray, Double) -> Double): BufferNDElement<Double, DoubleField> {
|
override inline fun mapIndexed(
|
||||||
check(this)
|
arg: NDBuffer<Double>,
|
||||||
|
crossinline transform: RealField.(index: IntArray, Double) -> Double
|
||||||
|
): BufferNDElement<Double, RealField> {
|
||||||
|
check(arg)
|
||||||
return BufferNDElement(
|
return BufferNDElement(
|
||||||
this@RealNDField,
|
this,
|
||||||
bufferFactory(strides.linearSize) { offset ->
|
buildBuffer(arg.strides.linearSize) { offset ->
|
||||||
elementField.transform(
|
elementField.transform(
|
||||||
strides.index(offset),
|
arg.strides.index(offset),
|
||||||
buffer[offset]
|
arg.buffer[offset]
|
||||||
)
|
)
|
||||||
})
|
})
|
||||||
}
|
}
|
||||||
@ -44,23 +50,23 @@ class RealNDField(shape: IntArray) :
|
|||||||
override inline fun combine(
|
override inline fun combine(
|
||||||
a: NDBuffer<Double>,
|
a: NDBuffer<Double>,
|
||||||
b: NDBuffer<Double>,
|
b: NDBuffer<Double>,
|
||||||
crossinline transform: DoubleField.(Double, Double) -> Double
|
crossinline transform: RealField.(Double, Double) -> Double
|
||||||
): BufferNDElement<Double, DoubleField> {
|
): BufferNDElement<Double, RealField> {
|
||||||
check(a, b)
|
check(a, b)
|
||||||
return BufferNDElement(
|
return BufferNDElement(
|
||||||
this,
|
this,
|
||||||
bufferFactory(strides.linearSize) { offset -> elementField.transform(a.buffer[offset], b.buffer[offset]) })
|
buildBuffer(strides.linearSize) { offset -> elementField.transform(a.buffer[offset], b.buffer[offset]) })
|
||||||
}
|
}
|
||||||
|
|
||||||
override fun power(arg: NDBuffer<Double>, pow: Double) = arg.map { power(it, pow) }
|
override fun power(arg: NDBuffer<Double>, pow: Double) = map(arg) { power(it, pow) }
|
||||||
|
|
||||||
override fun exp(arg: NDBuffer<Double>) = arg.map { exp(it) }
|
override fun exp(arg: NDBuffer<Double>) = map(arg) { exp(it) }
|
||||||
|
|
||||||
override fun ln(arg: NDBuffer<Double>) = arg.map { ln(it) }
|
override fun ln(arg: NDBuffer<Double>) = map(arg) { ln(it) }
|
||||||
|
|
||||||
override fun sin(arg: NDBuffer<Double>) = arg.map { sin(it) }
|
override fun sin(arg: NDBuffer<Double>) = map(arg) { sin(it) }
|
||||||
|
|
||||||
override fun cos(arg: NDBuffer<Double>) = arg.map { cos(it) }
|
override fun cos(arg: NDBuffer<Double>) = map(arg) { cos(it) }
|
||||||
//
|
//
|
||||||
// override fun NDBuffer<Double>.times(k: Number) = mapInline { value -> value * k.toDouble() }
|
// override fun NDBuffer<Double>.times(k: Number) = mapInline { value -> value * k.toDouble() }
|
||||||
//
|
//
|
||||||
@ -75,7 +81,7 @@ class RealNDField(shape: IntArray) :
|
|||||||
/**
|
/**
|
||||||
* Fast element production using function inlining
|
* Fast element production using function inlining
|
||||||
*/
|
*/
|
||||||
inline fun StridedNDField<Double, DoubleField>.produceInline(crossinline initializer: DoubleField.(Int) -> Double): RealNDElement {
|
inline fun StridedNDField<Double, RealField>.produceInline(crossinline initializer: RealField.(Int) -> Double): RealNDElement {
|
||||||
val array = DoubleArray(strides.linearSize) { offset -> elementField.initializer(offset) }
|
val array = DoubleArray(strides.linearSize) { offset -> elementField.initializer(offset) }
|
||||||
return BufferNDElement(this, DoubleBuffer(array))
|
return BufferNDElement(this, DoubleBuffer(array))
|
||||||
}
|
}
|
||||||
|
@ -2,14 +2,14 @@ package scientifik.kmath.expressions
|
|||||||
|
|
||||||
import scientifik.kmath.operations.Complex
|
import scientifik.kmath.operations.Complex
|
||||||
import scientifik.kmath.operations.ComplexField
|
import scientifik.kmath.operations.ComplexField
|
||||||
import scientifik.kmath.operations.DoubleField
|
import scientifik.kmath.operations.RealField
|
||||||
import kotlin.test.Test
|
import kotlin.test.Test
|
||||||
import kotlin.test.assertEquals
|
import kotlin.test.assertEquals
|
||||||
|
|
||||||
class ExpressionFieldTest {
|
class ExpressionFieldTest {
|
||||||
@Test
|
@Test
|
||||||
fun testExpression() {
|
fun testExpression() {
|
||||||
val context = ExpressionField(DoubleField)
|
val context = ExpressionField(RealField)
|
||||||
val expression = with(context) {
|
val expression = with(context) {
|
||||||
val x = variable("x", 2.0)
|
val x = variable("x", 2.0)
|
||||||
x * x + 2 * x + 1.0
|
x * x + 2 * x + 1.0
|
||||||
@ -36,7 +36,7 @@ class ExpressionFieldTest {
|
|||||||
return x * x + 2 * x + one
|
return x * x + 2 * x + one
|
||||||
}
|
}
|
||||||
|
|
||||||
val expression = ExpressionField(DoubleField).expression()
|
val expression = ExpressionField(RealField).expression()
|
||||||
assertEquals(expression("x" to 1.0), 4.0)
|
assertEquals(expression("x" to 1.0), 4.0)
|
||||||
}
|
}
|
||||||
|
|
||||||
@ -47,7 +47,7 @@ class ExpressionFieldTest {
|
|||||||
x * x + 2 * x + 1.0
|
x * x + 2 * x + 1.0
|
||||||
}
|
}
|
||||||
|
|
||||||
val expression = ExpressionField(DoubleField).expressionBuilder()
|
val expression = ExpressionField(RealField).expressionBuilder()
|
||||||
assertEquals(expression("x" to 1.0), 4.0)
|
assertEquals(expression("x" to 1.0), 4.0)
|
||||||
}
|
}
|
||||||
}
|
}
|
@ -6,7 +6,7 @@ import kotlin.test.assertEquals
|
|||||||
class RealFieldTest {
|
class RealFieldTest {
|
||||||
@Test
|
@Test
|
||||||
fun testSqrt() {
|
fun testSqrt() {
|
||||||
val sqrt = with(DoubleField) {
|
val sqrt = with(RealField) {
|
||||||
sqrt(25 * one)
|
sqrt(25 * one)
|
||||||
}
|
}
|
||||||
assertEquals(5.0, sqrt)
|
assertEquals(5.0, sqrt)
|
||||||
|
@ -2,54 +2,80 @@ package scientifik.kmath.structures
|
|||||||
|
|
||||||
import kotlinx.coroutines.*
|
import kotlinx.coroutines.*
|
||||||
import scientifik.kmath.operations.Field
|
import scientifik.kmath.operations.Field
|
||||||
|
import scientifik.kmath.operations.FieldElement
|
||||||
|
|
||||||
class LazyNDField<T, F : Field<T>>(shape: IntArray, field: F, val scope: CoroutineScope = GlobalScope) :
|
class LazyNDField<T, F : Field<T>>(shape: IntArray, field: F, val scope: CoroutineScope = GlobalScope) :
|
||||||
BufferNDField<T, F>(shape, field, ::boxingBuffer) {
|
AbstractNDField<T, F, NDStructure<T>>(shape, field) {
|
||||||
|
|
||||||
override fun add(a: NDStructure<T>, b: NDStructure<T>): NDElements<T, F> {
|
override val zero by lazy { produce { zero } }
|
||||||
return LazyNDStructure(this) { index ->
|
|
||||||
val aDeferred = a.deferred(index)
|
override val one by lazy { produce { one } }
|
||||||
val bDeferred = b.deferred(index)
|
|
||||||
aDeferred.await() + bDeferred.await()
|
override fun produce(initializer: F.(IntArray) -> T) =
|
||||||
|
LazyNDStructure(this) { elementField.initializer(it) }
|
||||||
|
|
||||||
|
override fun mapIndexed(
|
||||||
|
arg: NDStructure<T>,
|
||||||
|
transform: F.(index: IntArray, T) -> T
|
||||||
|
): LazyNDStructure<T, F> {
|
||||||
|
check(arg)
|
||||||
|
return if (arg is LazyNDStructure<T, *>) {
|
||||||
|
LazyNDStructure(this) { index ->
|
||||||
|
this.elementField.transform(index, arg.function(index))
|
||||||
|
}
|
||||||
|
} else {
|
||||||
|
LazyNDStructure(this) { elementField.transform(it, arg.await(it)) }
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
override fun multiply(a: NDStructure<T>, k: Double): NDElements<T, F> {
|
override fun map(arg: NDStructure<T>, transform: F.(T) -> T) =
|
||||||
return LazyNDStructure(this) { index -> a.await(index) * k }
|
mapIndexed(arg) { _, t -> transform(t) }
|
||||||
}
|
|
||||||
|
|
||||||
override fun multiply(a: NDStructure<T>, b: NDStructure<T>): NDElements<T, F> {
|
override fun combine(a: NDStructure<T>, b: NDStructure<T>, transform: F.(T, T) -> T): LazyNDStructure<T, F> {
|
||||||
return LazyNDStructure(this) { index ->
|
check(a, b)
|
||||||
val aDeferred = a.deferred(index)
|
return if (a is LazyNDStructure<T, *> && b is LazyNDStructure<T, *>) {
|
||||||
val bDeferred = b.deferred(index)
|
LazyNDStructure(this@LazyNDField) { index ->
|
||||||
aDeferred.await() * bDeferred.await()
|
elementField.transform(
|
||||||
|
a.function(index),
|
||||||
|
b.function(index)
|
||||||
|
)
|
||||||
|
}
|
||||||
|
} else {
|
||||||
|
LazyNDStructure(this@LazyNDField) { elementField.transform(a.await(it), b.await(it)) }
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
override fun divide(a: NDStructure<T>, b: NDStructure<T>): NDElements<T, F> {
|
fun NDStructure<T>.lazy(): LazyNDStructure<T, F> {
|
||||||
return LazyNDStructure(this) { index ->
|
check(this)
|
||||||
val aDeferred = a.deferred(index)
|
return if (this is LazyNDStructure<T, *>) {
|
||||||
val bDeferred = b.deferred(index)
|
LazyNDStructure(this@LazyNDField, function)
|
||||||
aDeferred.await() / bDeferred.await()
|
} else {
|
||||||
|
LazyNDStructure(this@LazyNDField) { get(it) }
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
class LazyNDStructure<T, F : Field<T>>(
|
class LazyNDStructure<T, F : Field<T>>(
|
||||||
override val context: LazyNDField<T, F>,
|
override val context: LazyNDField<T, F>,
|
||||||
val function: suspend F.(IntArray) -> T
|
val function: suspend (IntArray) -> T
|
||||||
) : NDElements<T, F>, NDStructure<T> {
|
) : FieldElement<NDStructure<T>, LazyNDStructure<T, F>, LazyNDField<T, F>>, NDElement<T, F> {
|
||||||
override val self: NDElements<T, F> get() = this
|
|
||||||
|
|
||||||
|
override fun unwrap(): NDStructure<T> = this
|
||||||
|
|
||||||
|
override fun NDStructure<T>.wrap(): LazyNDStructure<T, F> = LazyNDStructure(context) { await(it) }
|
||||||
|
|
||||||
override val shape: IntArray get() = context.shape
|
override val shape: IntArray get() = context.shape
|
||||||
|
override val elementField: F get() = context.elementField
|
||||||
|
|
||||||
|
override fun mapIndexed(transform: F.(index: IntArray, T) -> T): NDElement<T, F> =
|
||||||
|
context.run { mapIndexed(this@LazyNDStructure, transform) }
|
||||||
|
|
||||||
private val cache = HashMap<IntArray, Deferred<T>>()
|
private val cache = HashMap<IntArray, Deferred<T>>()
|
||||||
|
|
||||||
fun deferred(index: IntArray) = cache.getOrPut(index) {
|
fun deferred(index: IntArray) = cache.getOrPut(index) {
|
||||||
context.scope.async(context = Dispatchers.Math) {
|
context.scope.async(context = Dispatchers.Math) {
|
||||||
function.invoke(
|
function(index)
|
||||||
context.elementField,
|
|
||||||
index
|
|
||||||
)
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@ -61,7 +87,10 @@ class LazyNDStructure<T, F : Field<T>>(
|
|||||||
|
|
||||||
override fun elements(): Sequence<Pair<IntArray, T>> {
|
override fun elements(): Sequence<Pair<IntArray, T>> {
|
||||||
val strides = DefaultStrides(shape)
|
val strides = DefaultStrides(shape)
|
||||||
return strides.indices().map { index -> index to runBlocking { await(index) } }
|
val res = runBlocking {
|
||||||
|
strides.indices().toList().map { index -> index to await(index) }
|
||||||
|
}
|
||||||
|
return res.asSequence()
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@ -71,21 +100,11 @@ fun <T> NDStructure<T>.deferred(index: IntArray) =
|
|||||||
suspend fun <T> NDStructure<T>.await(index: IntArray) =
|
suspend fun <T> NDStructure<T>.await(index: IntArray) =
|
||||||
if (this is LazyNDStructure<T, *>) this.await(index) else get(index)
|
if (this is LazyNDStructure<T, *>) this.await(index) else get(index)
|
||||||
|
|
||||||
fun <T, F : Field<T>> NDElements<T, F>.lazy(scope: CoroutineScope = GlobalScope): LazyNDStructure<T, F> {
|
|
||||||
return if (this is LazyNDStructure<T, F>) {
|
|
||||||
this
|
|
||||||
} else {
|
|
||||||
val context = LazyNDField(context.shape, context.field, scope)
|
|
||||||
LazyNDStructure(context) { get(it) }
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
inline fun <T, F : Field<T>> LazyNDStructure<T, F>.mapIndexed(crossinline action: suspend F.(IntArray, T) -> T) =
|
fun <T : Any, F : Field<T>> NDField.Companion.lazy(shape: IntArray, field: F, scope: CoroutineScope = GlobalScope) =
|
||||||
LazyNDStructure(context) { index ->
|
LazyNDField(shape, field, scope)
|
||||||
action.invoke(this, index, await(index))
|
|
||||||
}
|
|
||||||
|
|
||||||
inline fun <T, F : Field<T>> LazyNDStructure<T, F>.map(crossinline action: suspend F.(T) -> T) =
|
fun <T, F : Field<T>> NDStructure<T>.lazy(field: F, scope: CoroutineScope = GlobalScope): LazyNDStructure<T, F> {
|
||||||
LazyNDStructure(context) { index ->
|
val context: LazyNDField<T, F> = LazyNDField(shape, field, scope)
|
||||||
action.invoke(this, await(index))
|
return LazyNDStructure(context) { get(it) }
|
||||||
}
|
}
|
@ -10,7 +10,7 @@ class LazyNDFieldTest {
|
|||||||
fun testLazyStructure() {
|
fun testLazyStructure() {
|
||||||
var counter = 0
|
var counter = 0
|
||||||
val regularStructure = NDField.generic(intArrayOf(2, 2, 2), IntField).produce { it[0] + it[1] - it[2] }
|
val regularStructure = NDField.generic(intArrayOf(2, 2, 2), IntField).produce { it[0] + it[1] - it[2] }
|
||||||
val result = (regularStructure.lazy() + 2).transform {
|
val result = (regularStructure.lazy(IntField) + 2).map {
|
||||||
counter++
|
counter++
|
||||||
it * it
|
it * it
|
||||||
}
|
}
|
||||||
|
Loading…
Reference in New Issue
Block a user