kscience/kmath
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Merge to update docs and contributions #504

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altavir merged 199 commits from dev into master 2022-10-03 20:58:00 +03:00
Conversation 0 Commits 199 Files Changed 531 +77 -76
35 changed files with 77 additions and 76 deletions
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1
CHANGELOG.md
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@ -2,6 +2,7 @@
## [Unreleased] ## [Unreleased]
### Added ### Added
- 2D optimal trajectory computation in a separate module `kmath-trajectory`
- Autodiff for generic algebra elements in core! - Autodiff for generic algebra elements in core!
- Algebra now has an obligatory `bufferFactory` (#477). - Algebra now has an obligatory `bufferFactory` (#477).

2
benchmarks/build.gradle.kts
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@ -163,7 +163,7 @@ tasks.withType<org.jetbrains.kotlin.gradle.dsl.KotlinJvmCompile> {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }
addBenchmarkProperties() addBenchmarkProperties()

2
build.gradle.kts
View File

@ -1,5 +1,5 @@
plugins { plugins {
id("ru.mipt.npm.gradle.project") id("space.kscience.gradle.project")
id("org.jetbrains.kotlinx.kover") version "0.5.0" id("org.jetbrains.kotlinx.kover") version "0.5.0"
} }

4
buildSrc/build.gradle.kts
View File

@ -1,5 +1,5 @@
plugins { plugins {
kotlin("jvm") version "1.7.0" kotlin("jvm") version "1.7.20-Beta"
`kotlin-dsl` `kotlin-dsl`
`version-catalog` `version-catalog`
alias(npmlibs.plugins.kotlin.plugin.serialization) alias(npmlibs.plugins.kotlin.plugin.serialization)
@ -19,7 +19,7 @@ val kotlinVersion = npmlibs.versions.kotlin.asProvider().get()
val benchmarksVersion = npmlibs.versions.kotlinx.benchmark.get() val benchmarksVersion = npmlibs.versions.kotlinx.benchmark.get()
dependencies { dependencies {
api("ru.mipt.npm:gradle-tools:$toolsVersion") api("space.kscience:gradle-tools:$toolsVersion")
api(npmlibs.atomicfu.gradle) api(npmlibs.atomicfu.gradle)
//plugins form benchmarks //plugins form benchmarks
api("org.jetbrains.kotlinx:kotlinx-benchmark-plugin:$benchmarksVersion") api("org.jetbrains.kotlinx:kotlinx-benchmark-plugin:$benchmarksVersion")

2
buildSrc/settings.gradle.kts
View File

@ -27,7 +27,7 @@ dependencyResolutionManagement {
versionCatalogs { versionCatalogs {
create("npmlibs") { create("npmlibs") {
from("ru.mipt.npm:version-catalog:$toolsVersion") from("space.kscience:version-catalog:$toolsVersion")
} }
} }
} }

2
buildSrc/src/main/kotlin/space/kscience/kmath/benchmarks/addBenchmarkProperties.kt
View File

@ -9,7 +9,7 @@ import kotlinx.benchmark.gradle.BenchmarksExtension
import kotlinx.serialization.decodeFromString import kotlinx.serialization.decodeFromString
import kotlinx.serialization.json.Json import kotlinx.serialization.json.Json
import org.gradle.api.Project import org.gradle.api.Project
import ru.mipt.npm.gradle.KScienceReadmeExtension import space.kscience.gradle.KScienceReadmeExtension
import java.time.LocalDateTime import java.time.LocalDateTime
import java.time.ZoneId import java.time.ZoneId
import java.time.format.DateTimeFormatter import java.time.format.DateTimeFormatter

2
examples/build.gradle.kts
View File

@ -68,5 +68,5 @@ tasks.withType<org.jetbrains.kotlin.gradle.dsl.KotlinJvmCompile> {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }

2
gradle.properties
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@ -12,4 +12,4 @@ org.gradle.configureondemand=true
org.gradle.parallel=true org.gradle.parallel=true
org.gradle.jvmargs=-Xmx4096m org.gradle.jvmargs=-Xmx4096m
toolsVersion=0.11.8-kotlin-1.7.10 toolsVersion=0.12.0-kotlin-1.7.20-Beta

4
kmath-ast/build.gradle.kts
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@ -1,6 +1,6 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
kotlin.js { kotlin.js {
@ -61,7 +61,7 @@ if (System.getProperty("space.kscience.kmath.ast.dump.generated.classes") == "1"
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

4
kmath-commons/build.gradle.kts
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@ -1,6 +1,6 @@
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
description = "Commons math binding for kmath" description = "Commons math binding for kmath"
@ -16,5 +16,5 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }

6
kmath-complex/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -14,7 +14,7 @@ kotlin.sourceSets {
readme { readme {
description = "Complex numbers and quaternions." description = "Complex numbers and quaternions."
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

6
kmath-core/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -26,7 +26,7 @@ kotlin.sourceSets {
readme { readme {
description = "Core classes, algebra definitions, basic linear algebra" description = "Core classes, algebra definitions, basic linear algebra"
maturity = ru.mipt.npm.gradle.Maturity.DEVELOPMENT maturity = space.kscience.gradle.Maturity.DEVELOPMENT
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

8
kmath-coroutines/build.gradle.kts
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@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -17,11 +17,11 @@ kotlin.sourceSets {
dependencies { dependencies {
api(project(":kmath-core")) api(project(":kmath-core"))
api(project(":kmath-complex")) api(project(":kmath-complex"))
api("org.jetbrains.kotlinx:kotlinx-coroutines-core:${ru.mipt.npm.gradle.KScienceVersions.coroutinesVersion}") api("org.jetbrains.kotlinx:kotlinx-coroutines-core:${space.kscience.gradle.KScienceVersions.coroutinesVersion}")
} }
} }
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }

6
kmath-dimensions/build.gradle.kts
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@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
description = "A proof of concept module for adding type-safe dimensions to structures" description = "A proof of concept module for adding type-safe dimensions to structures"
@ -21,5 +21,5 @@ kotlin.sourceSets {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

4
kmath-ejml/build.gradle.kts
View File

@ -2,7 +2,7 @@ import space.kscience.kmath.ejml.codegen.ejmlCodegen
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
dependencies { dependencies {
@ -14,7 +14,7 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

6
kmath-for-real/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets.commonMain { kotlin.sourceSets.commonMain {
@ -16,7 +16,7 @@ readme {
All operations are specialized to work with `Double` numbers without declaring algebraic contexts. All operations are specialized to work with `Double` numbers without declaring algebraic contexts.
One can still use generic algebras though. One can still use generic algebras though.
""".trimIndent() """.trimIndent()
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

6
kmath-functions/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
description = "Functions, integration and interpolation" description = "Functions, integration and interpolation"
@ -19,7 +19,7 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature("piecewise", "src/commonMain/kotlin/space/kscience/kmath/functions/Piecewise.kt") { feature("piecewise", "src/commonMain/kotlin/space/kscience/kmath/functions/Piecewise.kt") {

6
kmath-geometry/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets.commonMain { kotlin.sourceSets.commonMain {
@ -11,5 +11,5 @@ kotlin.sourceSets.commonMain {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

6
kmath-histograms/build.gradle.kts
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@ -1,6 +1,6 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
//apply(plugin = "kotlinx-atomicfu") //apply(plugin = "kotlinx-atomicfu")
@ -22,5 +22,5 @@ kotlin.sourceSets {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

4
kmath-jafama/build.gradle.kts
View File

@ -1,5 +1,5 @@
plugins { plugins {
id("ru.mipt.npm.gradle.jvm") id("space.kscience.gradle.jvm")
} }
description = "Jafama integration module" description = "Jafama integration module"
@ -14,7 +14,7 @@ repositories {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature("jafama-double", "src/main/kotlin/space/kscience/kmath/jafama/") { feature("jafama-double", "src/main/kotlin/space/kscience/kmath/jafama/") {

4
kmath-jupyter/build.gradle.kts
View File

@ -1,5 +1,5 @@
plugins { plugins {
id("ru.mipt.npm.gradle.jvm") id("space.kscience.gradle.jvm")
kotlin("jupyter.api") kotlin("jupyter.api")
} }
@ -14,7 +14,7 @@ kscience {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }
kotlin.sourceSets.all { kotlin.sourceSets.all {

4
kmath-kotlingrad/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
kotlin.sourceSets kotlin.sourceSets
@ -18,7 +18,7 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

6
kmath-memory/build.gradle.kts
View File

@ -1,10 +1,10 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.DEVELOPMENT maturity = space.kscience.gradle.Maturity.DEVELOPMENT
description = """ description = """
An API and basic implementation for arranging objects in a continuous memory block. An API and basic implementation for arranging objects in a continuous memory block.
""".trimIndent() """.trimIndent()

4
kmath-multik/build.gradle.kts
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@ -1,5 +1,5 @@
plugins { plugins {
id("ru.mipt.npm.gradle.jvm") id("space.kscience.gradle.jvm")
} }
description = "JetBrains Multik connector" description = "JetBrains Multik connector"
@ -10,5 +10,5 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

4
kmath-nd4j/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
description = "ND4J NDStructure implementation and according NDAlgebra classes" description = "ND4J NDStructure implementation and according NDAlgebra classes"
@ -13,7 +13,7 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature(id = "nd4jarraystructure") { "NDStructure wrapper for INDArray" } feature(id = "nd4jarraystructure") { "NDStructure wrapper for INDArray" }
feature(id = "nd4jarrayrings") { "Rings over Nd4jArrayStructure of Int and Long" } feature(id = "nd4jarrayrings") { "Rings over Nd4jArrayStructure of Int and Long" }

6
kmath-optimization/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -17,5 +17,5 @@ kotlin.sourceSets {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }

6
kmath-polynomial/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
description = "Polynomials, rational functions, and utilities" description = "Polynomials, rational functions, and utilities"
@ -19,7 +19,7 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature("polynomial abstraction", "src/commonMain/kotlin/space/kscience/kmath/functions/Polynomial.kt") { feature("polynomial abstraction", "src/commonMain/kotlin/space/kscience/kmath/functions/Polynomial.kt") {

6
kmath-stat/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -20,5 +20,5 @@ kotlin.sourceSets {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.EXPERIMENTAL maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
} }

4
kmath-symja/build.gradle.kts
View File

@ -5,7 +5,7 @@
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
description = "Symja integration module" description = "Symja integration module"
@ -38,5 +38,5 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

4
kmath-tensorflow/build.gradle.kts
View File

@ -1,5 +1,5 @@
plugins { plugins {
id("ru.mipt.npm.gradle.jvm") id("space.kscience.gradle.jvm")
} }
description = "Google tensorflow connector" description = "Google tensorflow connector"
@ -11,5 +11,5 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
} }

6
kmath-tensors/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {
@ -22,7 +22,7 @@ kotlin.sourceSets {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
feature( feature(

6
kmath-trajectory/build.gradle.kts
View File

@ -1,7 +1,7 @@
plugins { plugins {
kotlin("multiplatform") kotlin("multiplatform")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets.commonMain { kotlin.sourceSets.commonMain {
@ -12,6 +12,6 @@ kotlin.sourceSets.commonMain {
readme { readme {
description = "Path and trajectory optimization" description = "Path and trajectory optimization"
maturity = ru.mipt.npm.gradle.Maturity.PROTOTYPE maturity = space.kscience.gradle.Maturity.PROTOTYPE
propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md")) propertyByTemplate("artifact", rootProject.file("docs/templates/ARTIFACT-TEMPLATE.md"))
} }

4
kmath-viktor/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
kotlin("jvm") kotlin("jvm")
id("ru.mipt.npm.gradle.common") id("space.kscience.gradle.common")
} }
description = "Binding for https://github.com/JetBrains-Research/viktor" description = "Binding for https://github.com/JetBrains-Research/viktor"
@ -11,5 +11,5 @@ dependencies {
} }
readme { readme {
maturity = ru.mipt.npm.gradle.Maturity.DEVELOPMENT maturity = space.kscience.gradle.Maturity.DEVELOPMENT
} }

2
settings.gradle.kts
View File

@ -14,7 +14,7 @@ dependencyResolutionManagement {
versionCatalogs { versionCatalogs {
create("npmlibs") { create("npmlibs") {
from("ru.mipt.npm:version-catalog:$toolsVersion") from("space.kscience:version-catalog:$toolsVersion")
} }
} }
} }

4
test-utils/build.gradle.kts
View File

@ -1,6 +1,6 @@
plugins { plugins {
id("ru.mipt.npm.gradle.mpp") id("space.kscience.gradle.mpp")
id("ru.mipt.npm.gradle.native") id("space.kscience.gradle.native")
} }
kotlin.sourceSets { kotlin.sourceSets {