build.gradle.kts

@@ -26,7 +26,7 @@ allprojects {
     apply(plugin = "com.jfrog.artifactory")
 
     group = "scientifik"
-    version = "0.0.3-dev-4"
+    version = "0.0.3-dev-5"
 
     repositories {
         //maven("https://dl.bintray.com/kotlin/kotlin-eap")
@@ -44,7 +44,6 @@ allprojects {
         targets.all {
             sourceSets.all {
                 languageSettings.progressiveMode = true
-                languageSettings.enableLanguageFeature("+InlineClasses")
             }
         }
     }

kmath-core/build.gradle.kts

@@ -1,25 +1,13 @@
-import org.jetbrains.kotlin.gradle.tasks.KotlinCompile
-
 plugins {
     kotlin("multiplatform")
 }
 
 
 kotlin {
-    jvm {
-        compilations.all {
-            kotlinOptions {
-                jvmTarget = "1.8"
-            }
-        }
-    }
+    jvm ()
     js()
 
     sourceSets {
-        all {
-            languageSettings.progressiveMode = true
-        }
-        
         val commonMain by getting {
             dependencies {
                 api(kotlin("stdlib"))

kmath-sequential/build.gradle.kts

@@ -0,0 +1,51 @@
+plugins {
+    kotlin("multiplatform")
+    id("kotlinx-atomicfu")
+}
+
+
+kotlin {
+    jvm ()
+    js()
+
+    sourceSets {
+        val commonMain by getting {
+            dependencies {
+                api(project(":kmath-core"))
+                api(project(":kmath-coroutines"))
+                compileOnly("org.jetbrains.kotlinx:atomicfu-common:0.12.1")
+            }
+        }
+        val commonTest by getting {
+            dependencies {
+                implementation(kotlin("test-common"))
+                implementation(kotlin("test-annotations-common"))
+            }
+        }
+        val jvmMain by getting {
+            dependencies {
+                compileOnly("org.jetbrains.kotlinx:atomicfu:0.12.1")
+            }
+        }
+        val jvmTest by getting {
+            dependencies {
+                implementation(kotlin("test"))
+                implementation(kotlin("test-junit"))
+            }
+        }
+//        val jsMain by getting {
+//            dependencies {
+//                api(kotlin("stdlib-js"))
+//            }
+//        }
+        val jsTest by getting {
+            dependencies {
+                implementation(kotlin("test-js"))
+            }
+        }
+//        mingwMain {
+//        }
+//        mingwTest {
+//        }
+    }
+}

kmath-sequential/src/commonMain/kotlin/scientifik/kmath/sequential/Accumulators.kt

@@ -0,0 +1,35 @@
+package scientifik.kmath.sequential
+
+import kotlinx.atomicfu.atomic
+import kotlinx.atomicfu.getAndUpdate
+import scientifik.kmath.operations.Space
+
+/**
+ * An object with a state that accumulates incoming elements
+ */
+interface Accumulator<in T> {
+    //PENDING use suspend operations?
+    fun push(value: T)
+}
+
+fun <T> Accumulator<T>.pushAll(values: Iterable<T>) {
+    values.forEach { push(it) }
+}
+
+/**
+ * Generic thread-safe summator
+ */
+class GenericSum<T : Any>(val context: Space<T>) : Accumulator<T> {
+    //TODO add guard against overflow
+    val counter = atomic(0)
+    val sum = atomic(context.zero)
+
+    val value get() = with(context) { sum.value / counter.value }
+
+    override fun push(value: T) {
+        with(context) {
+            counter.incrementAndGet()
+            sum.getAndUpdate { it + value }
+        }
+    }
+}

kmath-sequential/src/commonMain/kotlin/scientifik/kmath/sequential/Chain.kt

@@ -0,0 +1,149 @@
+/*
+ * Copyright  2018 Alexander Nozik.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ *  Unless required by applicable law or agreed to in writing, software
+ *  distributed under the License is distributed on an "AS IS" BASIS,
+ *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ *  See the License for the specific language governing permissions and
+ *  limitations under the License.
+ */
+
+package scientifik.kmath.sequential
+
+import kotlinx.atomicfu.atomic
+import kotlinx.coroutines.CoroutineScope
+import kotlinx.coroutines.ExperimentalCoroutinesApi
+import kotlinx.coroutines.channels.ReceiveChannel
+import kotlinx.coroutines.channels.produce
+import kotlinx.coroutines.isActive
+
+
+/**
+ * A not-necessary-Markov chain of some type
+ * @param R - the chain element type
+ */
+interface Chain<out R> {
+    /**
+     * Last value of the chain. Returns null if [next] was not called
+     */
+    val value: R?
+
+    /**
+     * Generate next value, changing state if needed
+     */
+    suspend fun next(): R
+
+    /**
+     * Create a copy of current chain state. Consuming resulting chain does not affect initial chain
+     */
+    fun fork(): Chain<R>
+
+}
+
+/**
+ * Chain as a coroutine receive channel
+ */
+@ExperimentalCoroutinesApi
+fun <R> Chain<R>.asChannel(scope: CoroutineScope): ReceiveChannel<R> = scope.produce { while (isActive) send(next()) }
+
+fun <T> Iterator<T>.asChain(): Chain<T> = SimpleChain { next() }
+fun <T> Sequence<T>.asChain(): Chain<T> = iterator().asChain()
+
+
+/**
+ * Map the chain result using suspended transformation. Initial chain result can no longer be safely consumed
+ * since mapped chain consumes tokens. Accepts regular transformation function
+ */
+fun <T, R> Chain<T>.map(func: (T) -> R): Chain<R> {
+    val parent = this;
+    return object : Chain<R> {
+        override val value: R? get() = parent.value?.let(func)
+
+        override suspend fun next(): R {
+            return func(parent.next())
+        }
+
+        override fun fork(): Chain<R> {
+            return parent.fork().map(func)
+        }
+    }
+}
+
+/**
+ * A simple chain of independent tokens
+ */
+class SimpleChain<out R>(private val gen: suspend () -> R) : Chain<R> {
+    private val atomicValue = atomic<R?>(null)
+    override val value: R? get() = atomicValue.value
+
+    override suspend fun next(): R = gen().also { atomicValue.lazySet(it) }
+
+    override fun fork(): Chain<R> = this
+}
+
+//TODO force forks on mapping operations?
+
+/**
+ * A stateless Markov chain
+ */
+class MarkovChain<out R : Any>(private val seed: () -> R, private val gen: suspend (R) -> R) :
+    Chain<R> {
+
+    constructor(seed: R, gen: suspend (R) -> R) : this({ seed }, gen)
+
+    private val atomicValue by lazy { atomic(seed()) }
+    override val value: R get() = atomicValue.value
+
+    override suspend fun next(): R {
+        atomicValue.lazySet(gen(value))
+        return value
+    }
+
+    override fun fork(): Chain<R> {
+        return MarkovChain(value, gen)
+    }
+}
+
+/**
+ * A chain with possibly mutable state. The state must not be changed outside the chain. Two chins should never share the state
+ * @param S - the state of the chain
+ */
+class StatefulChain<S, out R>(
+    private val state: S,
+    private val seed: S.() -> R,
+    private val gen: suspend S.(R) -> R
+) : Chain<R> {
+
+    constructor(state: S, seed: R, gen: suspend S.(R) -> R) : this(state, { seed }, gen)
+
+    private val atomicValue by lazy { atomic(seed(state)) }
+    override val value: R get() = atomicValue.value
+
+    override suspend fun next(): R {
+        atomicValue.lazySet(gen(state, value))
+        return value
+    }
+
+    override fun fork(): Chain<R> {
+        throw RuntimeException("Fork not supported for stateful chain")
+    }
+}
+
+/**
+ * A chain that repeats the same value
+ */
+class ConstantChain<out T>(override val value: T) : Chain<T> {
+    override suspend fun next(): T {
+        return value
+    }
+
+    override fun fork(): Chain<T> {
+        return this
+    }
+}

kmath-sequential/src/commonMain/kotlin/scientifik/kmath/sequential/Cumulative.kt

@@ -1,4 +1,4 @@
-package scientifik.kmath.misc
+package scientifik.kmath.sequential
 
 import kotlin.jvm.JvmName
 

kmath-sequential/src/commonMain/kotlin/scientifik/kmath/sequential/Reducers.kt

@@ -0,0 +1,21 @@
+package scientifik.kmath.sequential
+
+import scientifik.kmath.operations.Space
+
+
+typealias Reducer<T, C, R> = (C, Iterable<T>) -> R
+
+inline fun <T, C, R> Iterable<T>.reduce(context: C, crossinline reducer: Reducer<T, C, R>) =
+    reducer(context, this@reduce)
+
+inline fun <T, C, R> Sequence<T>.reduce(context: C, crossinline reducer: Reducer<T, C, R>) =
+    asIterable().reduce(context, reducer)
+
+inline fun <T, C, R> Array<T>.reduce(context: C, crossinline reducer: Reducer<T, C, R>) =
+    asIterable().reduce(context, reducer)
+
+object Reducers {
+    fun <T : Any> mean(): Reducer<T, Space<T>, T> = { context, data ->
+        data.fold(GenericSum(context)) { sum, value -> sum.apply { push(value) } }.value
+    }
+}

kmath-sequential/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt

@@ -0,0 +1,41 @@
+package scientifik.kmath.chains
+
+import kotlinx.coroutines.runBlocking
+import scientifik.kmath.sequential.Chain
+import kotlin.sequences.Sequence
+
+/**
+ * Represent a chain as regular iterator (uses blocking calls)
+ */
+operator fun <R> Chain<R>.iterator() = object : Iterator<R> {
+    override fun hasNext(): Boolean = true
+
+    override fun next(): R = runBlocking { next() }
+}
+
+/**
+ * Represent a chain as a sequence
+ */
+fun <R> Chain<R>.asSequence(): Sequence<R> = object : Sequence<R> {
+    override fun iterator(): Iterator<R> = this@asSequence.iterator()
+}
+
+
+/**
+ * Map the chain result using suspended transformation. Initial chain result can no longer be safely consumed
+ * since mapped chain consumes tokens. Accepts suspending transformation function.
+ */
+fun <T, R> Chain<T>.map(func: suspend (T) -> R): Chain<R> {
+    val parent = this;
+    return object : Chain<R> {
+        override val value: R? get() = runBlocking { parent.value?.let { func(it) } }
+
+        override suspend fun next(): R {
+            return func(parent.next())
+        }
+
+        override fun fork(): Chain<R> {
+            return parent.fork().map(func)
+        }
+    }
+}

settings.gradle.kts

@@ -1,9 +1,28 @@
+buildscript {
+    dependencies {
+        classpath("org.jetbrains.kotlinx:atomicfu-gradle-plugin:0.12.1")
+    }
+
+    repositories {
+        jcenter()
+    }
+}
+
 pluginManagement {
     repositories {
         mavenCentral()
-        maven("https://plugins.gradle.org/m2/")
+        gradlePluginPortal()
         //maven ("https://dl.bintray.com/kotlin/kotlin-eap")
     }
+    resolutionStrategy {
+        eachPlugin {
+            when (requested.id.id) {
+                "kotlinx-atomicfu" -> {
+                    useModule("org.jetbrains.kotlinx:atomicfu-gradle-plugin:0.12.1")
+                }
+            }
+        }
+    }
 }
 
 //enableFeaturePreview("GRADLE_METADATA")
@@ -15,5 +34,6 @@ include(
     ":kmath-coroutines",
     ":kmath-commons",
     ":kmath-koma",
+    ":kmath-sequential",
     ":benchmarks"
 )