dev #24
@ -1,6 +1,5 @@
|
|||||||
package scientifik.kmath.histogram
|
package scientifik.kmath.histogram
|
||||||
|
|
||||||
import scientifik.kmath.operations.Space
|
|
||||||
import scientifik.kmath.structures.ArrayBuffer
|
import scientifik.kmath.structures.ArrayBuffer
|
||||||
import scientifik.kmath.structures.Buffer
|
import scientifik.kmath.structures.Buffer
|
||||||
|
|
||||||
@ -56,13 +55,3 @@ fun <T: Any> MutableHistogram<T,*>.fill(sequence: Iterable<Point<T>>) = sequence
|
|||||||
* Pass a sequence builder into histogram
|
* Pass a sequence builder into histogram
|
||||||
*/
|
*/
|
||||||
fun <T: Any> MutableHistogram<T, *>.fill(buider: suspend SequenceScope<Point<T>>.() -> Unit) = fill(sequence(buider).asIterable())
|
fun <T: Any> MutableHistogram<T, *>.fill(buider: suspend SequenceScope<Point<T>>.() -> Unit) = fill(sequence(buider).asIterable())
|
||||||
|
|
||||||
/**
|
|
||||||
* A space to perform arithmetic operations on histograms
|
|
||||||
*/
|
|
||||||
interface HistogramSpace<T: Any, B : Bin<T>, H : Histogram<T,B>> : Space<H> {
|
|
||||||
/**
|
|
||||||
* Rules for performing operations on bins
|
|
||||||
*/
|
|
||||||
val binSpace: Space<Bin<T>>
|
|
||||||
}
|
|
@ -1,23 +1,38 @@
|
|||||||
package scientifik.kmath.histogram
|
package scientifik.kmath.histogram
|
||||||
|
|
||||||
import scientifik.kmath.linear.RealVector
|
import scientifik.kmath.linear.Vector
|
||||||
|
import scientifik.kmath.operations.Space
|
||||||
import scientifik.kmath.structures.NDStructure
|
import scientifik.kmath.structures.NDStructure
|
||||||
|
|
||||||
class BinTemplate(val center: RealVector, val sizes: RealVector) {
|
class BinTemplate<T : Comparable<T>>(val center: Vector<T>, val sizes: Vector<T>) {
|
||||||
fun contains(vector: Point<out Double>): Boolean {
|
fun contains(vector: Point<out T>): Boolean {
|
||||||
if (vector.size != center.size) error("Dimension mismatch for input vector. Expected ${center.size}, but found ${vector.size}")
|
if (vector.size != center.size) error("Dimension mismatch for input vector. Expected ${center.size}, but found ${vector.size}")
|
||||||
return vector.asSequence().mapIndexed { i, value -> value in (center[i] - sizes[i] / 2)..(center[i] + sizes[i] / 2) }.all { it }
|
val upper = center + sizes/2.0
|
||||||
|
val lower = center - sizes/2.0
|
||||||
|
return vector.asSequence().mapIndexed { i, value ->
|
||||||
|
value in lower[i]..upper[i]
|
||||||
|
}.all { it }
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
class PhantomBin(val template: BinTemplate, override val value: Number) : Bin<Double> {
|
/**
|
||||||
|
* A space to perform arithmetic operations on histograms
|
||||||
|
*/
|
||||||
|
interface HistogramSpace<T : Any, B : Bin<T>, H : Histogram<T, B>> : Space<H> {
|
||||||
|
/**
|
||||||
|
* Rules for performing operations on bins
|
||||||
|
*/
|
||||||
|
val binSpace: Space<Bin<T>>
|
||||||
|
}
|
||||||
|
|
||||||
override fun contains(vector: Point<out Double>): Boolean = template.contains(vector)
|
class PhantomBin<T : Comparable<T>>(val template: BinTemplate<T>, override val value: Number) : Bin<T> {
|
||||||
|
|
||||||
|
override fun contains(vector: Point<out T>): Boolean = template.contains(vector)
|
||||||
|
|
||||||
override val dimension: Int
|
override val dimension: Int
|
||||||
get() = template.center.size
|
get() = template.center.size
|
||||||
|
|
||||||
override val center: Point<Double>
|
override val center: Point<T>
|
||||||
get() = template.center
|
get() = template.center
|
||||||
|
|
||||||
}
|
}
|
||||||
@ -26,19 +41,19 @@ class PhantomBin(val template: BinTemplate, override val value: Number) : Bin<Do
|
|||||||
* Immutable histogram with explicit structure for content and additional external bin description.
|
* Immutable histogram with explicit structure for content and additional external bin description.
|
||||||
* Bin search is slow, but full histogram algebra is supported.
|
* Bin search is slow, but full histogram algebra is supported.
|
||||||
*/
|
*/
|
||||||
class PhantomHistogram(
|
class PhantomHistogram<T : Comparable<T>>(
|
||||||
val bins: Map<BinTemplate, IntArray>,
|
val bins: Map<BinTemplate<T>, IntArray>,
|
||||||
val data: NDStructure<Double>
|
val data: NDStructure<Double>
|
||||||
) : Histogram<Double, PhantomBin> {
|
) : Histogram<T, PhantomBin<T>> {
|
||||||
|
|
||||||
override val dimension: Int
|
override val dimension: Int
|
||||||
get() = data.dimension
|
get() = data.dimension
|
||||||
|
|
||||||
override fun iterator(): Iterator<PhantomBin> {
|
override fun iterator(): Iterator<PhantomBin<T>> {
|
||||||
return bins.asSequence().map {entry-> PhantomBin(entry.key,data[entry.value]) }.iterator()
|
return bins.asSequence().map { entry -> PhantomBin(entry.key, data[entry.value]) }.iterator()
|
||||||
}
|
}
|
||||||
|
|
||||||
override fun get(point: Point<out Double>): PhantomBin? {
|
override fun get(point: Point<out T>): PhantomBin<T>? {
|
||||||
val template = bins.keys.find { it.contains(point) }
|
val template = bins.keys.find { it.contains(point) }
|
||||||
return template?.let { PhantomBin(it, data[bins[it]!!]) }
|
return template?.let { PhantomBin(it, data[bins[it]!!]) }
|
||||||
}
|
}
|
||||||
|
@ -1,7 +1,9 @@
|
|||||||
package scientifik.kmath.linear
|
package scientifik.kmath.linear
|
||||||
|
|
||||||
import scientifik.kmath.operations.*
|
import scientifik.kmath.operations.*
|
||||||
import scientifik.kmath.structures.*
|
import scientifik.kmath.structures.ExtendedNDField
|
||||||
|
import scientifik.kmath.structures.GenericNDField
|
||||||
|
import scientifik.kmath.structures.NDField
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* The space for linear elements. Supports scalar product alongside with standard linear operations.
|
* The space for linear elements. Supports scalar product alongside with standard linear operations.
|
||||||
@ -139,49 +141,7 @@ interface Matrix<T : Any> : SpaceElement<Matrix<T>, MatrixSpace<T>> {
|
|||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
/**
|
|
||||||
* A linear space for vectors
|
|
||||||
*/
|
|
||||||
abstract class VectorSpace<T : Any>(val size: Int, val field: Field<T>) : Space<Vector<T>> {
|
|
||||||
|
|
||||||
abstract fun produce(initializer: (Int) -> T): Vector<T>
|
|
||||||
|
|
||||||
override val zero: Vector<T> by lazy { produce { field.zero } }
|
|
||||||
|
|
||||||
override fun add(a: Vector<T>, b: Vector<T>): Vector<T> = produce { with(field) { a[it] + b[it] } }
|
|
||||||
|
|
||||||
override fun multiply(a: Vector<T>, k: Double): Vector<T> = produce { with(field) { a[it] * k } }
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
interface Vector<T : Any> : SpaceElement<Vector<T>, VectorSpace<T>>, Buffer<T>, Iterable<T> {
|
|
||||||
override val size: Int get() = context.size
|
|
||||||
|
|
||||||
companion object {
|
|
||||||
/**
|
|
||||||
* Create vector with custom field
|
|
||||||
*/
|
|
||||||
fun <T : Any> of(size: Int, field: Field<T>, initializer: (Int) -> T) =
|
|
||||||
ArrayVector(ArrayVectorSpace(size, field), initializer)
|
|
||||||
|
|
||||||
/**
|
|
||||||
* Create vector of [Double]
|
|
||||||
*/
|
|
||||||
fun ofReal(size: Int, initializer: (Int) -> Double) =
|
|
||||||
ArrayVector(ArrayVectorSpace(size, DoubleField, realNDFieldFactory), initializer)
|
|
||||||
|
|
||||||
fun ofReal(vararg point: Double) = point.toVector()
|
|
||||||
|
|
||||||
fun equals(v1: Vector<*>, v2: Vector<*>): Boolean {
|
|
||||||
if (v1 === v2) return true
|
|
||||||
if (v1.context != v2.context) return false
|
|
||||||
for (i in 0 until v2.size) {
|
|
||||||
if (v1[i] != v2[i]) return false
|
|
||||||
}
|
|
||||||
return true
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
typealias NDFieldFactory<T> = (IntArray) -> NDField<T>
|
typealias NDFieldFactory<T> = (IntArray) -> NDField<T>
|
||||||
|
|
||||||
@ -210,61 +170,7 @@ class ArrayMatrixSpace<T : Any>(
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
class ArrayVectorSpace<T : Any>(
|
|
||||||
size: Int,
|
|
||||||
field: Field<T>,
|
|
||||||
val ndFactory: NDFieldFactory<T> = genericNDFieldFactory(field)
|
|
||||||
) : VectorSpace<T>(size, field) {
|
|
||||||
val ndField by lazy {
|
|
||||||
ndFactory(intArrayOf(size))
|
|
||||||
}
|
|
||||||
|
|
||||||
override fun produce(initializer: (Int) -> T): Vector<T> = ArrayVector(this, initializer)
|
|
||||||
}
|
|
||||||
|
|
||||||
/**
|
|
||||||
* Member of [ArrayMatrixSpace] which wraps 2-D array
|
|
||||||
*/
|
|
||||||
class ArrayMatrix<T : Any> internal constructor(override val context: ArrayMatrixSpace<T>, val element: NDElement<T>) : Matrix<T> {
|
|
||||||
|
|
||||||
constructor(context: ArrayMatrixSpace<T>, initializer: (Int, Int) -> T) : this(context, context.ndField.produce { list -> initializer(list[0], list[1]) })
|
|
||||||
|
|
||||||
override val rows: Int get() = context.rows
|
|
||||||
|
|
||||||
override val columns: Int get() = context.columns
|
|
||||||
|
|
||||||
override fun get(i: Int, j: Int): T {
|
|
||||||
return element[i, j]
|
|
||||||
}
|
|
||||||
|
|
||||||
override val self: ArrayMatrix<T> get() = this
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
class ArrayVector<T : Any> internal constructor(override val context: ArrayVectorSpace<T>, val element: NDElement<T>) : Vector<T> {
|
|
||||||
|
|
||||||
constructor(context: ArrayVectorSpace<T>, initializer: (Int) -> T) : this(context, context.ndField.produce { list -> initializer(list[0]) })
|
|
||||||
|
|
||||||
init {
|
|
||||||
if (context.size != element.shape[0]) {
|
|
||||||
error("Array dimension mismatch")
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
override fun get(index: Int): T {
|
|
||||||
return element[index]
|
|
||||||
}
|
|
||||||
|
|
||||||
override val self: ArrayVector<T> get() = this
|
|
||||||
|
|
||||||
override fun iterator(): Iterator<T> = (0 until size).map { element[it] }.iterator()
|
|
||||||
|
|
||||||
override fun copy(): ArrayVector<T> = ArrayVector(context, element)
|
|
||||||
|
|
||||||
override fun toString(): String = this.joinToString(prefix = "[", postfix = "]", separator = ", ") { it.toString() }
|
|
||||||
}
|
|
||||||
|
|
||||||
typealias RealVector = Vector<Double>
|
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* A group of methods to resolve equation A dot X = B, where A and B are matrices or vectors
|
* A group of methods to resolve equation A dot X = B, where A and B are matrices or vectors
|
||||||
|
@ -0,0 +1,118 @@
|
|||||||
|
package scientifik.kmath.linear
|
||||||
|
|
||||||
|
import scientifik.kmath.histogram.Point
|
||||||
|
import scientifik.kmath.operations.DoubleField
|
||||||
|
import scientifik.kmath.operations.Field
|
||||||
|
import scientifik.kmath.operations.Space
|
||||||
|
import scientifik.kmath.operations.SpaceElement
|
||||||
|
import scientifik.kmath.structures.NDElement
|
||||||
|
import scientifik.kmath.structures.get
|
||||||
|
|
||||||
|
/**
|
||||||
|
* A linear space for vectors.
|
||||||
|
* Could be used on any point-like structure
|
||||||
|
*/
|
||||||
|
abstract class VectorSpace<T : Any>(val size: Int, val field: Field<T>) : Space<Point<T>> {
|
||||||
|
|
||||||
|
abstract fun produce(initializer: (Int) -> T): Vector<T>
|
||||||
|
|
||||||
|
override val zero: Vector<T> by lazy { produce { field.zero } }
|
||||||
|
|
||||||
|
override fun add(a: Point<T>, b: Point<T>): Vector<T> = produce { with(field) { a[it] + b[it] } }
|
||||||
|
|
||||||
|
override fun multiply(a: Point<T>, k: Double): Vector<T> = produce { with(field) { a[it] * k } }
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
/**
|
||||||
|
* A point coupled to the linear space
|
||||||
|
*/
|
||||||
|
interface Vector<T : Any> : SpaceElement<Point<T>, VectorSpace<T>>, Point<T>, Iterable<T> {
|
||||||
|
override val size: Int get() = context.size
|
||||||
|
|
||||||
|
override operator fun plus(b: Point<T>): Vector<T> = context.add(self, b)
|
||||||
|
override operator fun minus(b: Point<T>): Vector<T> = context.add(self, context.multiply(b, -1.0))
|
||||||
|
override operator fun times(k: Number): Vector<T> = context.multiply(self, k.toDouble())
|
||||||
|
override operator fun div(k: Number): Vector<T> = context.multiply(self, 1.0 / k.toDouble())
|
||||||
|
|
||||||
|
companion object {
|
||||||
|
/**
|
||||||
|
* Create vector with custom field
|
||||||
|
*/
|
||||||
|
fun <T : Any> of(size: Int, field: Field<T>, initializer: (Int) -> T) =
|
||||||
|
ArrayVector(ArrayVectorSpace(size, field), initializer)
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Create vector of [Double]
|
||||||
|
*/
|
||||||
|
fun ofReal(size: Int, initializer: (Int) -> Double) =
|
||||||
|
ArrayVector(ArrayVectorSpace(size, DoubleField, realNDFieldFactory), initializer)
|
||||||
|
|
||||||
|
fun ofReal(vararg point: Double) = point.toVector()
|
||||||
|
|
||||||
|
fun equals(v1: Vector<*>, v2: Vector<*>): Boolean {
|
||||||
|
if (v1 === v2) return true
|
||||||
|
if (v1.context != v2.context) return false
|
||||||
|
for (i in 0 until v2.size) {
|
||||||
|
if (v1[i] != v2[i]) return false
|
||||||
|
}
|
||||||
|
return true
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
class ArrayVectorSpace<T : Any>(
|
||||||
|
size: Int,
|
||||||
|
field: Field<T>,
|
||||||
|
val ndFactory: NDFieldFactory<T> = genericNDFieldFactory(field)
|
||||||
|
) : VectorSpace<T>(size, field) {
|
||||||
|
val ndField by lazy {
|
||||||
|
ndFactory(intArrayOf(size))
|
||||||
|
}
|
||||||
|
|
||||||
|
override fun produce(initializer: (Int) -> T): Vector<T> = ArrayVector(this, initializer)
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Member of [ArrayMatrixSpace] which wraps 2-D array
|
||||||
|
*/
|
||||||
|
class ArrayMatrix<T : Any> internal constructor(override val context: ArrayMatrixSpace<T>, val element: NDElement<T>) : Matrix<T> {
|
||||||
|
|
||||||
|
constructor(context: ArrayMatrixSpace<T>, initializer: (Int, Int) -> T) : this(context, context.ndField.produce { list -> initializer(list[0], list[1]) })
|
||||||
|
|
||||||
|
override val rows: Int get() = context.rows
|
||||||
|
|
||||||
|
override val columns: Int get() = context.columns
|
||||||
|
|
||||||
|
override fun get(i: Int, j: Int): T {
|
||||||
|
return element[i, j]
|
||||||
|
}
|
||||||
|
|
||||||
|
override val self: ArrayMatrix<T> get() = this
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
class ArrayVector<T : Any> internal constructor(override val context: VectorSpace<T>, val element: NDElement<T>) : Vector<T> {
|
||||||
|
|
||||||
|
constructor(context: ArrayVectorSpace<T>, initializer: (Int) -> T) : this(context, context.ndField.produce { list -> initializer(list[0]) })
|
||||||
|
|
||||||
|
init {
|
||||||
|
if (context.size != element.shape[0]) {
|
||||||
|
error("Array dimension mismatch")
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
override fun get(index: Int): T {
|
||||||
|
return element[index]
|
||||||
|
}
|
||||||
|
|
||||||
|
override val self: ArrayVector<T> get() = this
|
||||||
|
|
||||||
|
override fun iterator(): Iterator<T> = (0 until size).map { element[it] }.iterator()
|
||||||
|
|
||||||
|
override fun copy(): ArrayVector<T> = ArrayVector(context, element)
|
||||||
|
|
||||||
|
override fun toString(): String = this.joinToString(prefix = "[", postfix = "]", separator = ", ") { it.toString() }
|
||||||
|
}
|
||||||
|
|
||||||
|
typealias RealVector = Vector<Double>
|
@ -2,7 +2,7 @@ package scientifik.kmath.structures
|
|||||||
|
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* A generic linear buffer for both primitives and objects
|
* A generic random access structure for both primitives and objects
|
||||||
*/
|
*/
|
||||||
interface Buffer<T> : Iterable<T> {
|
interface Buffer<T> : Iterable<T> {
|
||||||
|
|
||||||
|
Loading…
Reference in New Issue
Block a user