Commit Graph

252 Commits

Author SHA1 Message Date
bf504ae6c5 Basic series 2021-11-05 16:58:13 +03:00
688382eed6 Shapeless ND and Buffer algebras 2021-10-17 12:42:35 +03:00
abae29bbed DoubleBuffer algebra refactoring 2021-10-02 18:54:45 +03:00
89eebbecb7 Fix EJML inversion issue 2021-09-21 21:24:27 +03:00
dfd6e0a949 Merge remote-tracking branch 'origin/dev' into feature/advanced-optimization
# Conflicts:
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/optimization/CMOptimization.kt
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/optimization/cmFit.kt
#	kmath-ejml/src/main/kotlin/space/kscience/kmath/ejml/_generated.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/FunctionOptimization.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/NoDerivFunctionOptimization.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/Optimization.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/XYFit.kt
2021-08-16 09:56:00 +03:00
aaa298616d QOW is working more or less 2021-08-16 09:55:03 +03:00
Iaroslav Postovalov
da27c2e494 Fix path to LICENSE in the notice 2021-08-08 12:27:16 +07:00
a020d1545c merge dev 2021-08-06 12:23:24 +03:00
Iaroslav Postovalov
afd5908784 Revise grammar of KDoc comments, refresh documentation files 2021-07-29 07:16:26 +07:00
Iaroslav Postovalov
b1998ed1a9 Replace public override with override 2021-07-19 03:12:41 +07:00
Iaroslav Postovalov
ef41c3f168 Build infrastructure changes 2021-07-17 16:40:34 +07:00
Iaroslav Postovalov
5d2eaaf68a Add contracts to some functions, fix multiple style issues 2021-07-13 00:38:30 +07:00
Iaroslav Postovalov
83fc4e28d8 Generate README, bump versions of Kotlin, Gradle, ND4J, ASM 2021-07-03 17:23:45 +07:00
Iaroslav Postovalov
4d6428a308 Update Jafama module documentation with some minor code amendments 2021-06-14 21:51:06 +07:00
Iaroslav Postovalov
7b736a7c81 Fix README.md again 2021-06-09 21:40:47 +07:00
95c0b2d3f0 [WIP] optimization with QOW 2021-06-08 14:27:45 +03:00
88e94a7fd9 [WIP] Optimization 2021-05-24 17:02:12 +03:00
3ec674c61b Merge branch 'dev' into feature/advanced-optimization
# Conflicts:
#	examples/src/main/kotlin/space/kscience/kmath/functions/integrate.kt
#	examples/src/main/kotlin/space/kscience/kmath/functions/matrixIntegration.kt
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/integration/CMGaussRuleIntegrator.kt
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/integration/CMIntegrator.kt
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/optimization/CMOptimization.kt
#	kmath-commons/src/main/kotlin/space/kscience/kmath/commons/optimization/cmFit.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/integration/GaussIntegrator.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/integration/Integrand.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/integration/MultivariateIntegrand.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/integration/UnivariateIntegrand.kt
#	kmath-functions/src/commonTest/kotlin/space/kscience/kmath/integration/GaussIntegralTest.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/FunctionOptimization.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/NoDerivFunctionOptimization.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/optimization/Optimization.kt
2021-05-24 14:44:08 +03:00
12805712d3 Integrand toString 2021-05-24 14:30:51 +03:00
380c76fe40 Piecewise optimization 2021-05-23 20:01:07 +03:00
ec7a971df7 Separate double-based integrator for a Simpson rule 2021-05-22 20:17:52 +03:00
a24c8dcbce Simpson and spline integration 2021-05-22 20:08:49 +03:00
18509f1259 Simpson integrator 2021-05-21 23:14:07 +03:00
Iaroslav Postovalov
d7a4228f5f Add out variance to StructureND and some related types, make some unrelated changes 2021-05-20 19:57:55 +07:00
8a07140f7c Minor piecewise rework 2021-05-19 22:35:06 +03:00
0898285542 Removed Any restriction on polynomials 2021-05-19 12:58:01 +03:00
d45d44f96d Fix Interpolation 2021-05-17 21:55:32 +03:00
53a6d3543f [WIP] Interpolation fix 2021-05-17 16:53:12 +03:00
e6c6925209 Fix integration borders 2021-05-16 22:33:53 +03:00
d1e76175b7 Refactor integrator API. 2021-05-16 14:09:21 +03:00
6f39b38a72 Refactor integrator API. 2021-05-16 13:59:37 +03:00
6eb95f26eb Additional piecewise extension 2021-05-14 12:11:37 +03:00
feb5743f58 Change signature of one of integrate helpers 2021-05-13 11:10:59 +03:00
6d78bb8d91 0.3.0-dev-8. Readme update 2021-05-08 14:36:37 +03:00
Iaroslav Postovalov
591b408729
MST rendering: support infix division, use arcsin instead sin^-1 form for inverse trigonometric functions 2021-05-04 17:22:09 +07:00
Iaroslav Postovalov
598b2e1587
Rewrite EJML module by dropping ejml-simple abstraction level; multiple build script changes 2021-04-30 19:48:12 +07:00
257337f4fb [WIP] Refactor optimization 2021-04-25 22:34:59 +03:00
Iaroslav Postovalov
0a0d0af94a
Configure copyright scoping 2021-04-21 19:46:02 +07:00
Iaroslav Postovalov
b6a57dbfd0
MST compilation to WebAssembly with Binaryen, reorganize internal JS bindings, tests refactor 2021-04-21 19:17:57 +07:00
fd4108b74f fix segmented integral 2021-04-19 11:26:06 +03:00
07e39a068d Use split interval for integration. 2021-04-18 19:43:03 +03:00
6c215abf13 Fix BigInt benchmark. 2021-04-17 10:08:04 +03:00
299592ed25 Update readme 2021-04-16 19:44:51 +03:00
ef1200aad0 Update integration API 2021-04-16 16:39:27 +03:00
65a8d8f581 Field element integration 2021-04-16 15:50:33 +03:00
Iaroslav Postovalov
e9c31b7827
Merge branch 'master' into dev
# Conflicts:
#	README.md
#	build.gradle.kts
#	examples/src/main/kotlin/space/kscience/kmath/stat/DistributionBenchmark.kt
#	examples/src/main/kotlin/space/kscience/kmath/structures/ParallelRealNDField.kt
#	kmath-ast/README.md
#	kmath-ast/build.gradle.kts
#	kmath-ast/src/commonMain/kotlin/space/kscience/kmath/ast/MstExpression.kt
#	kmath-complex/README.md
#	kmath-complex/build.gradle.kts
#	kmath-complex/src/commonMain/kotlin/space/kscience/kmath/complex/ComplexNDField.kt
#	kmath-core/README.md
#	kmath-core/build.gradle.kts
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/expressions/MST.kt
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/expressions/MstAlgebra.kt
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/nd/RealNDField.kt
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/structures/RealBufferField.kt
#	kmath-coroutines/build.gradle.kts
#	kmath-coroutines/src/commonMain/kotlin/space/kscience/kmath/chains/BlockingRealChain.kt
#	kmath-coroutines/src/jvmMain/kotlin/space/kscience/kmath/structures/LazyNDStructure.kt
#	kmath-dimensions/src/commonTest/kotlin/kscience/dimensions/DMatrixContextTest.kt
#	kmath-for-real/README.md
#	kmath-functions/README.md
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/interpolation/Interpolator.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/interpolation/LoessInterpolator.kt
#	kmath-functions/src/commonMain/kotlin/space/kscience/kmath/interpolation/XYPointSet.kt
#	kmath-geometry/build.gradle.kts
#	kmath-nd4j/README.md
#	kmath-nd4j/build.gradle.kts
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/distributions/FactorizedDistribution.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/stat/Distribution.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/stat/Fitting.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/stat/OptimizationProblem.kt
#	kmath-stat/src/jvmMain/kotlin/space/kscience/kmath/stat/distributions.kt
#	kmath-viktor/src/main/kotlin/space/kscience/kmath/viktor/ViktorNDStructure.kt
2021-04-16 18:02:44 +07:00
ba3c9b6d45 BigIntBenchmarks. cleanup 2021-04-16 09:47:30 +03:00
Iaroslav Postovalov
41b7349a43
Setup copyright headers, add references to third-party files, update LICENSE 2021-04-16 00:15:00 +07:00
19ec6a57a4 Gauss-Legendre working test 2021-04-15 19:39:46 +03:00
93bc371622 WIP Integrator tests 2021-04-15 09:53:29 +03:00
e2ceb64d36 Fix errors and migrations 2021-04-14 23:26:21 +03:00
6cea5742e8 Blocking statistics. Move MST to core 2021-04-14 12:40:26 +03:00
Iaroslav Postovalov
9ee506b1d2
Some experiments with MST rendering 2021-03-31 16:12:07 +07:00
Iaroslav Postovalov
f26cad6d18
Merge branch 'dev' into feature/mp-samplers
# Conflicts:
#	examples/src/main/kotlin/space/kscience/kmath/commons/fit/fitWithAutoDiff.kt
#	examples/src/main/kotlin/space/kscience/kmath/stat/DistributionBenchmark.kt
#	examples/src/main/kotlin/space/kscience/kmath/stat/DistributionDemo.kt
#	kmath-commons/src/test/kotlin/space/kscience/kmath/commons/optimization/OptimizeTest.kt
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/structures/Buffer.kt
#	kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingRealChain.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/SamplerAlgebra.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/stat/Distribution.kt
#	kmath-stat/src/commonMain/kotlin/space/kscience/kmath/stat/RandomChain.kt
#	kmath-stat/src/jvmMain/kotlin/space/kscience/kmath/stat/distributions.kt
2021-03-31 01:48:26 +07:00
cd05ca6e95 Initial Optimization API 2021-03-24 16:36:06 +03:00
e216fd50f5 Merge remote-tracking branch 'origin/dev' into dev
# Conflicts:
#	build.gradle.kts
#	kmath-core/src/commonMain/kotlin/space/kscience/kmath/misc/XYPointSet.kt
#	kmath-ejml/src/main/kotlin/space/kscience/kmath/ejml/EjmlLinearSpace.kt
2021-03-24 13:33:08 +03:00
Iaroslav Postovalov
7579a35f8e
Merge branch 'dev' into commandertvis/doc 2021-03-23 19:48:16 +07:00
Iaroslav Postovalov
4d160b81b9
Improve KDoc comments for kmath-functions 2021-03-23 19:48:12 +07:00
Iaroslav Postovalov
1b01654667
Improve Dokka configuration 2021-03-22 20:41:18 +07:00
Iaroslav Postovalov
67aa173927
Some documentation updates 2021-03-22 16:11:54 +07:00
aeceb4a337 Move dataset to core 2021-03-19 14:53:14 +03:00
248d42c4e0 Remove MutableBufferND 2021-03-16 22:46:22 +03:00
206e4cbcf6 Real -> Double 2021-03-16 21:17:26 +03:00
05f742452d Structure naming change 2021-03-16 20:56:20 +03:00
105b84b87c minor cosmetics 2021-03-16 20:44:03 +03:00
874875c13a API for integration 2021-03-16 15:05:44 +03:00
b2df860381 Merge branch 'dev' into feature/integration 2021-03-16 09:47:40 +03:00
acfdd187a4 Bump readme 2021-03-15 20:17:04 +03:00
179a07e034 Bump readme 2021-03-15 19:41:37 +03:00
52a942dbe2 integrand 2021-03-12 19:29:06 +03:00
522f39cef3 replace Space by Group 2021-03-10 22:09:19 +03:00
6a5ca2a115 Code review. 2021-03-10 18:02:04 +03:00
8ae8ebe871 Fully refactor algebra split ScaleOperations from Space. 2021-03-08 21:03:48 +03:00
dd5ef4810f Gradle plugin 0.8.0 2021-02-21 16:13:40 +03:00
209e17cd42 Merge histograms 2021-02-19 10:52:56 +03:00
8485d28872 Change package name to space.kscience 2021-02-18 11:17:28 +03:00
Iaroslav Postovalov
d69a04bb6e
Merge branch 'dev' into feature/mp-samplers 2021-02-12 20:58:03 +07:00
Iaroslav Postovalov
0e42cc9f5c
Update README 2021-02-11 23:35:45 +07:00
Iaroslav Postovalov
9210bc9198
Merge branch 'dev' into feature/mp-samplers 2021-02-06 23:12:16 +07:00
28240954b0 Documentation update. API generated 2021-01-30 20:23:15 +03:00
85927c9f6b Documentation update. 2021-01-30 20:12:14 +03:00
061398b009 [WIP] Refactor NDStructures 2021-01-22 23:22:24 +03:00
Iaroslav Postovalov
3c602e859d
Merge branch 'dev' into mp-samplers
# Conflicts:
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt
#	examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt
#	kmath-commons/src/main/kotlin/kscience/kmath/commons/expressions/DiffExpression.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/distributions/NormalDistribution.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalErf.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalGamma.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/internal/InternalUtils.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AhrensDieterExponentialSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AhrensDieterMarsagliaTsangGammaSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/AliasMethodDiscreteSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/BoxMullerNormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/GaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/KempSmallMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/LargeMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/MarsagliaNormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/NormalizedGaussianSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/PoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/SmallMeanPoissonSampler.kt
#	kmath-stat/src/commonMain/kotlin/kscience/kmath/stat/samplers/ZigguratNormalizedGaussianSampler.kt
#	kmath-stat/src/jvmMain/kotlin/kscience/kmath/stat/distributions.kt
2020-11-02 01:16:29 +07:00
1c1580c8e6 Generification of autodiff and chi2 2020-10-27 17:57:49 +03:00
Iaroslav Postovalov
612f6f0082
Refactor, remove unused files, remove BasicSampler 2020-10-16 16:49:47 +07:00
28190f9800 scientifik -> kscience 2020-09-20 22:39:27 +03:00
5032523bbf Merge remote-tracking branch 'origin/dev' into dev
# Conflicts:
#	build.gradle.kts
#	examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt
#	kmath-ast/build.gradle.kts
#	kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt
#	kmath-commons/build.gradle.kts
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt
#	kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt
#	kmath-for-real/build.gradle.kts
#	kmath-functions/build.gradle.kts
#	kmath-memory/build.gradle.kts
#	kmath-prob/build.gradle.kts
2020-09-20 21:59:10 +03:00
Iaroslav
5eaeb82a0f
Make one-liners not one-liners, add newlines at EOFs, optimize imports and Kotlin extension configurations 2020-09-20 16:36:48 +07:00
Iaroslav Postovalov
8b171ac3a3
Update changelog 2020-09-12 09:22:26 +07:00
Iaroslav Postovalov
2b15d69f11
Enable functions module and unmark Polynomial inline 2020-09-10 15:22:01 +07:00
Iaroslav Postovalov
fc5ec8fed7
Drop koma support, add more explicit visibility modifiers 2020-09-09 22:31:54 +07:00
Iaroslav Postovalov
f567f73d19
Specify explicit API visbility, minor refactoring (error handling, etc.) 2020-09-09 11:28:54 +07:00
Iaroslav Postovalov
6b79e79d21
Update tools and Kotlin, specify public explicitly, minor contracts refactor 2020-09-09 09:55:26 +07:00
Iaroslav
5e4522bb06
Upgrade build tools plugin to dev version; file reformat; change dependencies' versions; specify visibility explicitly at certain places (core, especially), make some interfaces fun 2020-09-08 16:40:47 +07:00
Iaroslav Postovalov
40888f66d6
Replace opt-in annotations with useExperimentalAnnotation for modules 2020-08-22 16:49:21 +07:00
Iaroslav
1d18832aa6
Provide contracts for many functions, make inline several functions, replace <algebra>.run { and with(<algebra>> { with <algebra> {, add newlines at EOFs, specify operator modifier explicitly at many places, reformat files, replace if (...) error guards with require and check 2020-08-22 02:42:59 +07:00
e00a66ca42 Fix linear interpolator const 2020-02-13 16:21:41 +03:00
068b90e7ab Add different ways to provide data for XY interpolator 2020-02-12 22:26:25 +03:00
73f40105c4 Interpolation API 2020-02-12 21:57:21 +03:00
d56b4148be Generalized linear interpolation 2020-01-12 20:51:16 +03:00
396b31d106 Linear interpolation 2020-01-12 10:49:42 +03:00
8662935dbe Merge branch 'master' into dev 2020-01-12 10:02:28 +03:00