From 5cd58a399d3e665c8f4972e1fbf58144f7ba89e6 Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Tue, 11 Aug 2020 16:18:13 +0700 Subject: [PATCH 01/26] Add .space.kts --- .space.kts | 1 + 1 file changed, 1 insertion(+) create mode 100644 .space.kts diff --git a/.space.kts b/.space.kts new file mode 100644 index 000000000..9dda0cbf7 --- /dev/null +++ b/.space.kts @@ -0,0 +1 @@ +job("Build") { gradlew("openjdk:11", "build") } From 5e4522bb06c571880d257824143313b42405216c Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Tue, 8 Sep 2020 16:40:47 +0700 Subject: [PATCH 02/26] Upgrade build tools plugin to dev version; file reformat; change dependencies' versions; specify visibility explicitly at certain places (core, especially), make some interfaces `fun` --- build.gradle.kts | 17 +- examples/build.gradle.kts | 34 +-- .../structures/StructureReadBenchmark.kt | 2 +- .../structures/StructureWriteBenchmark.kt | 4 +- gradle/wrapper/gradle-wrapper.jar | Bin 58910 -> 59203 bytes gradle/wrapper/gradle-wrapper.properties | 2 +- gradlew | 2 +- gradlew.bat | 21 +- kmath-ast/build.gradle.kts | 6 +- .../kotlin/scientifik/kmath/ast/MST.kt | 18 +- .../kotlin/scientifik/kmath/ast/MstAlgebra.kt | 4 +- .../scientifik/kmath/ast/MstExpression.kt | 23 +- .../kotlin/scientifik/kmath/ast/parser.kt | 18 +- .../kotlin/scientifik/kmath/asm/asm.kt | 6 +- kmath-commons/build.gradle.kts | 4 +- .../commons/expressions/DiffExpression.kt | 39 ++- kmath-core/build.gradle.kts | 9 +- .../kotlin/scientifik/kmath/domains/Domain.kt | 6 +- .../kmath/domains/HyperSquareDomain.kt | 2 +- .../scientifik/kmath/domains/RealDomain.kt | 14 +- .../kmath/domains/UnconstrainedDomain.kt | 2 +- .../kmath/domains/UnivariateDomain.kt | 4 +- .../kmath/expressions/Expression.kt | 22 +- .../FunctionalExpressionAlgebra.kt | 35 +-- .../{Builders.kt => expressionBuilders.kt} | 8 +- .../scientifik/kmath/linear/BufferMatrix.kt | 12 +- .../scientifik/kmath/linear/FeaturedMatrix.kt | 36 ++- .../kmath/linear/LUPDecomposition.kt | 59 ++-- .../scientifik/kmath/linear/LinearAlgebra.kt | 14 +- .../scientifik/kmath/linear/MatrixBuilder.kt | 14 +- .../scientifik/kmath/linear/MatrixContext.kt | 29 +- .../scientifik/kmath/linear/MatrixFeatures.kt | 30 +- .../scientifik/kmath/linear/VectorSpace.kt | 20 +- .../scientifik/kmath/linear/VirtualMatrix.kt | 25 +- .../kotlin/scientifik/kmath/misc/AutoDiff.kt | 48 +-- .../kotlin/scientifik/kmath/misc/Grids.kt | 10 +- .../scientifik/kmath/misc/cumulative.kt | 36 ++- .../scientifik/kmath/operations/Algebra.kt | 89 +++--- .../kmath/operations/AlgebraElements.kt | 28 +- .../kmath/operations/AlgebraExtensions.kt | 20 +- .../scientifik/kmath/operations/BigInt.kt | 276 ++++++++---------- .../scientifik/kmath/operations/Complex.kt | 35 ++- .../kmath/operations/NumberAlgebra.kt | 4 +- .../kmath/operations/OptionalOperations.kt | 122 ++++---- .../kmath/structures/BoxingNDField.kt | 8 +- .../kmath/structures/BoxingNDRing.kt | 6 +- .../kmath/structures/BufferAccessor2D.kt | 17 +- .../kmath/structures/BufferedNDAlgebra.kt | 22 +- .../kmath/structures/BufferedNDElement.kt | 18 +- .../scientifik/kmath/structures/Buffers.kt | 50 ++-- .../kmath/structures/ComplexNDField.kt | 24 +- .../kmath/structures/ExtendedNDField.kt | 2 +- .../kmath/structures/FlaggedBuffer.kt | 2 +- .../scientifik/kmath/structures/IntBuffer.kt | 2 +- .../scientifik/kmath/structures/LongBuffer.kt | 10 +- .../scientifik/kmath/structures/NDAlgebra.kt | 58 ++-- .../kmath/structures/RealNDField.kt | 12 +- .../kmath/structures/ShortBuffer.kt | 10 +- .../kmath/structures/ShortNDRing.kt | 18 +- .../kmath/structures/Structure2D.kt | 26 +- .../scientifik/kmath/operations/BigNumbers.kt | 8 +- kmath-coroutines/build.gradle.kts | 16 +- .../kotlin/scientifik/kmath/chains/Chain.kt | 38 ++- kmath-dimensions/build.gradle.kts | 12 +- .../scientifik/kmath/dimensions/Dimensions.kt | 22 +- .../kotlin/scientifik/kmath/dimensions/dim.kt | 4 +- .../kotlin/scientifik/kmath/dimensions/dim.kt | 4 +- kmath-for-real/build.gradle.kts | 9 +- .../scientifik/kmath/real/realMatrix.kt | 64 ++-- kmath-functions/build.gradle.kts | 9 +- .../scientifik/kmath/functions/Piecewise.kt | 16 +- .../scientifik/kmath/functions/Polynomial.kt | 27 +- .../scientifik/kmath/functions/functions.kt | 18 +- .../kmath/interpolation/Interpolator.kt | 12 +- .../kmath/interpolation/LinearInterpolator.kt | 2 +- .../kmath/interpolation/SplineInterpolator.kt | 4 +- .../kmath/interpolation/XYPointSet.kt | 21 +- .../interpolation/LinearInterpolatorTest.kt | 3 +- kmath-geometry/build.gradle.kts | 6 +- kmath-histograms/build.gradle.kts | 6 +- kmath-koma/build.gradle.kts | 11 +- kmath-memory/build.gradle.kts | 3 +- .../kotlin/scientifik/memory/Memory.kt | 58 ++-- .../kotlin/scientifik/memory/MemorySpec.kt | 16 +- .../scientifik/memory/DataViewMemory.kt | 4 +- .../scientifik/memory/ByteBufferMemory.kt | 8 +- kmath-prob/build.gradle.kts | 11 +- .../scientifik/kmath/prob/distributions.kt | 12 +- kmath-viktor/build.gradle.kts | 6 +- settings.gradle.kts | 23 +- 90 files changed, 905 insertions(+), 1042 deletions(-) rename kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/{Builders.kt => expressionBuilders.kt} (65%) diff --git a/build.gradle.kts b/build.gradle.kts index 8a2ba3617..3a9991443 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -1,11 +1,8 @@ -plugins { - id("scientifik.publish") apply false -} +plugins { id("ru.mipt.npm.publish") apply false } -val kmathVersion by extra("0.1.4-dev-8") - -val bintrayRepo by extra("scientifik") -val githubProject by extra("kmath") +val kmathVersion: String by extra("0.1.4-dev-8") +val bintrayRepo: String by extra("scientifik") +val githubProject: String by extra("kmath") allprojects { repositories { @@ -18,8 +15,4 @@ allprojects { version = kmathVersion } -subprojects { - if (name.startsWith("kmath")) { - apply(plugin = "scientifik.publish") - } -} \ No newline at end of file +subprojects { if (name.startsWith("kmath")) apply(plugin = "ru.mipt.npm.publish") } diff --git a/examples/build.gradle.kts b/examples/build.gradle.kts index f5a4d5831..9fd90d08b 100644 --- a/examples/build.gradle.kts +++ b/examples/build.gradle.kts @@ -1,16 +1,13 @@ -import org.jetbrains.kotlin.allopen.gradle.AllOpenExtension import org.jetbrains.kotlin.gradle.tasks.KotlinCompile plugins { java kotlin("jvm") - kotlin("plugin.allopen") version "1.3.72" - id("kotlinx.benchmark") version "0.2.0-dev-8" + kotlin("plugin.allopen") version "1.4.0" + id("kotlinx.benchmark") version "0.2.0-dev-20" } -configure { - annotation("org.openjdk.jmh.annotations.State") -} +allOpen.annotation("org.openjdk.jmh.annotations.State") repositories { maven("http://dl.bintray.com/kyonifer/maven") @@ -19,9 +16,7 @@ repositories { mavenCentral() } -sourceSets { - register("benchmarks") -} +sourceSets.register("benchmarks") dependencies { implementation(project(":kmath-ast")) @@ -34,25 +29,22 @@ dependencies { implementation(project(":kmath-dimensions")) implementation("com.kyonifer:koma-core-ejml:0.12") implementation("org.jetbrains.kotlinx:kotlinx-io-jvm:0.2.0-npm-dev-6") - implementation("org.jetbrains.kotlinx:kotlinx.benchmark.runtime:0.2.0-dev-8") + implementation("org.jetbrains.kotlinx:kotlinx.benchmark.runtime:0.2.0-dev-20") "benchmarksCompile"(sourceSets.main.get().output + sourceSets.main.get().compileClasspath) //sourceSets.main.output + sourceSets.main.runtimeClasspath } // Configure benchmark benchmark { // Setup configurations - targets { + targets // This one matches sourceSet name above - register("benchmarks") - } + .register("benchmarks") - configurations { - register("fast") { - warmups = 5 // number of warmup iterations - iterations = 3 // number of iterations - iterationTime = 500 // time in seconds per iteration - iterationTimeUnit = "ms" // time unity for iterationTime, default is seconds - } + configurations.register("fast") { + warmups = 5 // number of warmup iterations + iterations = 3 // number of iterations + iterationTime = 500 // time in seconds per iteration + iterationTimeUnit = "ms" // time unity for iterationTime, default is seconds } } @@ -65,7 +57,7 @@ kotlin.sourceSets.all { tasks.withType { kotlinOptions { - jvmTarget = Scientifik.JVM_TARGET.toString() + jvmTarget = "11" freeCompilerArgs = freeCompilerArgs + "-Xopt-in=kotlin.RequiresOptIn" } } diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt index a33fdb2c4..d5998cd0a 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt +++ b/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt @@ -2,7 +2,7 @@ package scientifik.kmath.structures import kotlin.system.measureTimeMillis -fun main(args: Array) { +fun main() { val n = 6000 val array = DoubleArray(n * n) { 1.0 } diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt index 0241f12ad..ffcecbce2 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt +++ b/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt @@ -2,9 +2,7 @@ package scientifik.kmath.structures import kotlin.system.measureTimeMillis - -fun main(args: Array) { - +fun main() { val n = 6000 val structure = NDStructure.build(intArrayOf(n, n), Buffer.Companion::auto) { 1.0 } diff --git a/gradle/wrapper/gradle-wrapper.jar b/gradle/wrapper/gradle-wrapper.jar index 62d4c053550b91381bbd28b1afc82d634bf73a8a..e708b1c023ec8b20f512888fe07c5bd3ff77bb8f 100644 GIT binary patch delta 6656 zcmY+Ibx_pN*Z*PZ4(U#j1qtbvrOTyO8fghZ8kYJfEe%U|$dV!@ASKczEZq$fg48M@ z;LnHO_j#Uq?%bL4dY^md%$$4Y+&@nKC|1uHR&59YNhubGh72|a#ylPdh9V+akp|I; 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distributionPath=wrapper/dists -distributionUrl=https\://services.gradle.org/distributions/gradle-6.5.1-bin.zip +distributionUrl=https\://services.gradle.org/distributions/gradle-6.6.1-bin.zip zipStoreBase=GRADLE_USER_HOME zipStorePath=wrapper/dists diff --git a/gradlew b/gradlew index fbd7c5158..4f906e0c8 100755 --- a/gradlew +++ b/gradlew @@ -130,7 +130,7 @@ fi if [ "$cygwin" = "true" -o "$msys" = "true" ] ; then APP_HOME=`cygpath --path --mixed "$APP_HOME"` CLASSPATH=`cygpath --path --mixed "$CLASSPATH"` - + JAVACMD=`cygpath --unix "$JAVACMD"` # We build the pattern for arguments to be converted via cygpath diff --git a/gradlew.bat b/gradlew.bat index 5093609d5..107acd32c 100644 --- a/gradlew.bat +++ b/gradlew.bat @@ -40,7 +40,7 @@ if defined JAVA_HOME goto findJavaFromJavaHome set JAVA_EXE=java.exe %JAVA_EXE% -version >NUL 2>&1 -if "%ERRORLEVEL%" == "0" goto init +if "%ERRORLEVEL%" == "0" goto execute echo. echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH. @@ -54,7 +54,7 @@ goto fail set JAVA_HOME=%JAVA_HOME:"=% set JAVA_EXE=%JAVA_HOME%/bin/java.exe -if exist "%JAVA_EXE%" goto init +if exist "%JAVA_EXE%" goto execute echo. echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME% @@ -64,21 +64,6 @@ echo location of your Java installation. goto fail -:init -@rem Get command-line arguments, handling Windows variants - -if not "%OS%" == "Windows_NT" goto win9xME_args - -:win9xME_args -@rem Slurp the command line arguments. -set CMD_LINE_ARGS= -set _SKIP=2 - -:win9xME_args_slurp -if "x%~1" == "x" goto execute - -set CMD_LINE_ARGS=%* - :execute @rem Setup the command line @@ -86,7 +71,7 @@ set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar @rem Execute Gradle -"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS% +"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %* :end @rem End local scope for the variables with windows NT shell diff --git a/kmath-ast/build.gradle.kts b/kmath-ast/build.gradle.kts index 86b10bdc7..c376154b5 100644 --- a/kmath-ast/build.gradle.kts +++ b/kmath-ast/build.gradle.kts @@ -1,8 +1,6 @@ -plugins { id("scientifik.mpp") } +plugins { id("ru.mipt.npm.mpp") } kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) @@ -17,4 +15,4 @@ kotlin.sourceSets { implementation(kotlin("reflect")) } } -} \ No newline at end of file +} diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt index 0e8151c04..798172799 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt @@ -7,20 +7,20 @@ import scientifik.kmath.operations.RealField /** * A Mathematical Syntax Tree node for mathematical expressions. */ -sealed class MST { +public sealed class MST { /** * A node containing raw string. * * @property value the value of this node. */ - data class Symbolic(val value: String) : MST() + public data class Symbolic(val value: String) : MST() /** * A node containing a numeric value or scalar. * * @property value the value of this number. */ - data class Numeric(val value: Number) : MST() + public data class Numeric(val value: Number) : MST() /** * A node containing an unary operation. @@ -28,9 +28,7 @@ sealed class MST { * @property operation the identifier of operation. * @property value the argument of this operation. */ - data class Unary(val operation: String, val value: MST) : MST() { - companion object - } + public data class Unary(val operation: String, val value: MST) : MST() /** * A node containing binary operation. @@ -39,9 +37,7 @@ sealed class MST { * @property left the left operand. * @property right the right operand. */ - data class Binary(val operation: String, val left: MST, val right: MST) : MST() { - companion object - } + public data class Binary(val operation: String, val left: MST, val right: MST) : MST() } // TODO add a function with named arguments @@ -53,7 +49,7 @@ sealed class MST { * @param node the node to evaluate. * @return the value of expression. */ -fun Algebra.evaluate(node: MST): T = when (node) { +public fun Algebra.evaluate(node: MST): T = when (node) { is MST.Numeric -> (this as? NumericAlgebra)?.number(node.value) ?: error("Numeric nodes are not supported by $this") is MST.Symbolic -> symbol(node.value) @@ -84,4 +80,4 @@ fun Algebra.evaluate(node: MST): T = when (node) { * @param algebra the algebra that provides operations. * @return the value of expression. */ -fun MST.interpret(algebra: Algebra): T = algebra.evaluate(this) +public fun MST.interpret(algebra: Algebra): T = algebra.evaluate(this) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt index 23deae24b..e4480e608 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt @@ -5,7 +5,7 @@ import scientifik.kmath.operations.* /** * [Algebra] over [MST] nodes. */ -object MstAlgebra : NumericAlgebra { +public object MstAlgebra : NumericAlgebra { override fun number(value: Number): MST = MST.Numeric(value) override fun symbol(value: String): MST = MST.Symbolic(value) @@ -20,7 +20,7 @@ object MstAlgebra : NumericAlgebra { /** * [Space] over [MST] nodes. */ -object MstSpace : Space, NumericAlgebra { +public object MstSpace : Space, NumericAlgebra { override val zero: MST = number(0.0) override fun number(value: Number): MST = MstAlgebra.number(value) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt index 3cee33956..9d8a6a804 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt @@ -2,7 +2,6 @@ package scientifik.kmath.ast import scientifik.kmath.expressions.* import scientifik.kmath.operations.* -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract @@ -13,7 +12,7 @@ import kotlin.contracts.contract * @property algebra the algebra that provides operations. * @property mst the [MST] node. */ -class MstExpression(val algebra: Algebra, val mst: MST) : Expression { +public class MstExpression(public val algebra: Algebra, public val mst: MST) : Expression { private inner class InnerAlgebra(val arguments: Map) : NumericAlgebra { override fun symbol(value: String): T = arguments[value] ?: algebra.symbol(value) override fun unaryOperation(operation: String, arg: T): T = algebra.unaryOperation(operation, arg) @@ -33,7 +32,7 @@ class MstExpression(val algebra: Algebra, val mst: MST) : Expression { /** * Builds [MstExpression] over [Algebra]. */ -inline fun , E : Algebra> A.mst( +public inline fun , E : Algebra> A.mst( mstAlgebra: E, block: E.() -> MST ): MstExpression = MstExpression(this, mstAlgebra.block()) @@ -41,7 +40,7 @@ inline fun , E : Algebra> A.mst( /** * Builds [MstExpression] over [Space]. */ -inline fun Space.mstInSpace(block: MstSpace.() -> MST): MstExpression { +public inline fun Space.mstInSpace(block: MstSpace.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return MstExpression(this, MstSpace.block()) } @@ -49,7 +48,7 @@ inline fun Space.mstInSpace(block: MstSpace.() -> MST): Mst /** * Builds [MstExpression] over [Ring]. */ -inline fun Ring.mstInRing(block: MstRing.() -> MST): MstExpression { +public inline fun Ring.mstInRing(block: MstRing.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return MstExpression(this, MstRing.block()) } @@ -57,7 +56,7 @@ inline fun Ring.mstInRing(block: MstRing.() -> MST): MstExp /** * Builds [MstExpression] over [Field]. */ -inline fun Field.mstInField(block: MstField.() -> MST): MstExpression { +public inline fun Field.mstInField(block: MstField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return MstExpression(this, MstField.block()) } @@ -65,7 +64,7 @@ inline fun Field.mstInField(block: MstField.() -> MST): Mst /** * Builds [MstExpression] over [ExtendedField]. */ -inline fun Field.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression { +public inline fun Field.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return MstExpression(this, MstExtendedField.block()) } @@ -73,7 +72,7 @@ inline fun Field.mstInExtendedField(block: MstExtendedField /** * Builds [MstExpression] over [FunctionalExpressionSpace]. */ -inline fun > FunctionalExpressionSpace.mstInSpace(block: MstSpace.() -> MST): MstExpression { +public inline fun > FunctionalExpressionSpace.mstInSpace(block: MstSpace.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return algebra.mstInSpace(block) } @@ -81,7 +80,7 @@ inline fun > FunctionalExpressionSpace.mstIn /** * Builds [MstExpression] over [FunctionalExpressionRing]. */ -inline fun > FunctionalExpressionRing.mstInRing(block: MstRing.() -> MST): MstExpression { +public inline fun > FunctionalExpressionRing.mstInRing(block: MstRing.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return algebra.mstInRing(block) } @@ -89,7 +88,7 @@ inline fun > FunctionalExpressionRing.mstInRi /** * Builds [MstExpression] over [FunctionalExpressionField]. */ -inline fun > FunctionalExpressionField.mstInField(block: MstField.() -> MST): MstExpression { +public inline fun > FunctionalExpressionField.mstInField(block: MstField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return algebra.mstInField(block) } @@ -97,7 +96,9 @@ inline fun > FunctionalExpressionField.mstIn /** * Builds [MstExpression] over [FunctionalExpressionExtendedField]. */ -inline fun > FunctionalExpressionExtendedField.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression { +public inline fun > FunctionalExpressionExtendedField.mstInExtendedField( + block: MstExtendedField.() -> MST +): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return algebra.mstInExtendedField(block) } diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt index cba335a8d..5733649e4 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt @@ -18,7 +18,7 @@ import scientifik.kmath.operations.SpaceOperations /** * TODO move to core */ -object ArithmeticsEvaluator : Grammar() { +public object ArithmeticsEvaluator : Grammar() { // TODO replace with "...".toRegex() when better-parse 0.4.1 is released private val num: Token by regexToken("[\\d.]+(?:[eE][-+]?\\d+)?") private val id: Token by regexToken("[a-z_A-Z][\\da-z_A-Z]*") @@ -35,23 +35,23 @@ object ArithmeticsEvaluator : Grammar() { private val number: Parser by num use { MST.Numeric(text.toDouble()) } private val singular: Parser by id use { MST.Symbolic(text) } - private val unaryFunction: Parser by (id and skip(lpar) and parser(::subSumChain) and skip(rpar)) + private val unaryFunction: Parser by (id and -lpar and parser(::subSumChain) and -rpar) .map { (id, term) -> MST.Unary(id.text, term) } private val binaryFunction: Parser by id - .and(skip(lpar)) + .and(-lpar) .and(parser(::subSumChain)) - .and(skip(comma)) + .and(-comma) .and(parser(::subSumChain)) - .and(skip(rpar)) + .and(-rpar) .map { (id, left, right) -> MST.Binary(id.text, left, right) } private val term: Parser by number .or(binaryFunction) .or(unaryFunction) .or(singular) - .or(skip(minus) and parser(::term) map { MST.Unary(SpaceOperations.MINUS_OPERATION, it) }) - .or(skip(lpar) and parser(::subSumChain) and skip(rpar)) + .or(-minus and parser(::term) map { MST.Unary(SpaceOperations.MINUS_OPERATION, it) }) + .or(-lpar and parser(::subSumChain) and -rpar) private val powChain: Parser by leftAssociative(term = term, operator = pow) { a, _, b -> MST.Binary(PowerOperations.POW_OPERATION, a, b) @@ -86,7 +86,7 @@ object ArithmeticsEvaluator : Grammar() { * @receiver the string to parse. * @return the [MST] node. */ -fun String.tryParseMath(): ParseResult = ArithmeticsEvaluator.tryParseToEnd(this) +public fun String.tryParseMath(): ParseResult = ArithmeticsEvaluator.tryParseToEnd(this) /** * Parses the string into [MST]. @@ -94,4 +94,4 @@ fun String.tryParseMath(): ParseResult = ArithmeticsEvaluator.tryParseToEnd * @receiver the string to parse. * @return the [MST] node. */ -fun String.parseMath(): MST = ArithmeticsEvaluator.parseToEnd(this) +public fun String.parseMath(): MST = ArithmeticsEvaluator.parseToEnd(this) diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt index ee0ea15ff..5d563aceb 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt @@ -13,7 +13,7 @@ import kotlin.reflect.KClass /** * Compile given MST to an Expression using AST compiler */ -fun MST.compileWith(type: KClass, algebra: Algebra): Expression { +public fun MST.compileWith(type: KClass, algebra: Algebra): Expression { fun AsmBuilder.visit(node: MST) { when (node) { is MST.Symbolic -> { @@ -56,9 +56,9 @@ fun MST.compileWith(type: KClass, algebra: Algebra): Expression< /** * Compile an [MST] to ASM using given algebra */ -inline fun Algebra.expression(mst: MST): Expression = mst.compileWith(T::class, this) +public inline fun Algebra.expression(mst: MST): Expression = mst.compileWith(T::class, this) /** * Optimize performance of an [MstExpression] using ASM codegen */ -inline fun MstExpression.compile(): Expression = mst.compileWith(T::class, algebra) +public inline fun MstExpression.compile(): Expression = mst.compileWith(T::class, algebra) diff --git a/kmath-commons/build.gradle.kts b/kmath-commons/build.gradle.kts index 63c832b7c..45eee7765 100644 --- a/kmath-commons/build.gradle.kts +++ b/kmath-commons/build.gradle.kts @@ -1,4 +1,4 @@ -plugins { id("scientifik.jvm") } +plugins { id("ru.mipt.npm.jvm") } description = "Commons math binding for kmath" dependencies { @@ -8,5 +8,3 @@ dependencies { api(project(":kmath-functions")) api("org.apache.commons:commons-math3:3.6.1") } - -kotlin.sourceSets.all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt index 9119991e5..a6f905471 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt @@ -7,14 +7,13 @@ import scientifik.kmath.operations.ExtendedField import scientifik.kmath.operations.Field import scientifik.kmath.operations.invoke import kotlin.properties.ReadOnlyProperty -import kotlin.reflect.KProperty /** * A field wrapping commons-math derivative structures */ -class DerivativeStructureField( - val order: Int, - val parameters: Map +public class DerivativeStructureField( + public val order: Int, + public val parameters: Map ) : ExtendedField { override val zero: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size) } override val one: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size, 1.0) } @@ -23,25 +22,24 @@ class DerivativeStructureField( DerivativeStructure(parameters.size, order, parameters.keys.indexOf(key), value) } - val variable: ReadOnlyProperty = object : ReadOnlyProperty { - override fun getValue(thisRef: Any?, property: KProperty<*>): DerivativeStructure = - variables[property.name] ?: error("A variable with name ${property.name} does not exist") + public val variable: ReadOnlyProperty = ReadOnlyProperty { _, property -> + variables[property.name] ?: error("A variable with name ${property.name} does not exist") } - fun variable(name: String, default: DerivativeStructure? = null): DerivativeStructure = + public fun variable(name: String, default: DerivativeStructure? = null): DerivativeStructure = variables[name] ?: default ?: error("A variable with name $name does not exist") - fun Number.const(): DerivativeStructure = DerivativeStructure(order, parameters.size, toDouble()) + public fun Number.const(): DerivativeStructure = DerivativeStructure(order, parameters.size, toDouble()) - fun DerivativeStructure.deriv(parName: String, order: Int = 1): Double { + public fun DerivativeStructure.deriv(parName: String, order: Int = 1): Double { return deriv(mapOf(parName to order)) } - fun DerivativeStructure.deriv(orders: Map): Double { + public fun DerivativeStructure.deriv(orders: Map): Double { return getPartialDerivative(*parameters.keys.map { orders[it] ?: 0 }.toIntArray()) } - fun DerivativeStructure.deriv(vararg orders: Pair): Double = deriv(mapOf(*orders)) + public fun DerivativeStructure.deriv(vararg orders: Pair): Double = deriv(mapOf(*orders)) override fun add(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.add(b) @@ -61,7 +59,6 @@ class DerivativeStructureField( override fun asin(arg: DerivativeStructure): DerivativeStructure = arg.asin() override fun acos(arg: DerivativeStructure): DerivativeStructure = arg.acos() override fun atan(arg: DerivativeStructure): DerivativeStructure = arg.atan() - override fun sinh(arg: DerivativeStructure): DerivativeStructure = arg.sinh() override fun cosh(arg: DerivativeStructure): DerivativeStructure = arg.cosh() override fun tanh(arg: DerivativeStructure): DerivativeStructure = arg.tanh() @@ -75,7 +72,7 @@ class DerivativeStructureField( else -> arg.pow(pow.toDouble()) } - fun power(arg: DerivativeStructure, pow: DerivativeStructure): DerivativeStructure = arg.pow(pow) + public fun power(arg: DerivativeStructure, pow: DerivativeStructure): DerivativeStructure = arg.pow(pow) override fun exp(arg: DerivativeStructure): DerivativeStructure = arg.exp() override fun ln(arg: DerivativeStructure): DerivativeStructure = arg.log() @@ -88,7 +85,8 @@ class DerivativeStructureField( /** * A constructs that creates a derivative structure with required order on-demand */ -class DiffExpression(val function: DerivativeStructureField.() -> DerivativeStructure) : Expression { +public class DiffExpression(public val function: DerivativeStructureField.() -> DerivativeStructure) : + Expression { override operator fun invoke(arguments: Map): Double = DerivativeStructureField( 0, arguments @@ -98,21 +96,20 @@ class DiffExpression(val function: DerivativeStructureField.() -> DerivativeStru * Get the derivative expression with given orders * TODO make result [DiffExpression] */ - fun derivative(orders: Map): Expression = object : Expression { - override operator fun invoke(arguments: Map): Double = - (DerivativeStructureField(orders.values.max() ?: 0, arguments)) { function().deriv(orders) } + public fun derivative(orders: Map): Expression = Expression { arguments -> + (DerivativeStructureField(orders.values.max() ?: 0, arguments)) { function().deriv(orders) } } //TODO add gradient and maybe other vector operators } -fun DiffExpression.derivative(vararg orders: Pair): Expression = derivative(mapOf(*orders)) -fun DiffExpression.derivative(name: String): Expression = derivative(name to 1) +public fun DiffExpression.derivative(vararg orders: Pair): Expression = derivative(mapOf(*orders)) +public fun DiffExpression.derivative(name: String): Expression = derivative(name to 1) /** * A context for [DiffExpression] (not to be confused with [DerivativeStructure]) */ -object DiffExpressionAlgebra : ExpressionAlgebra, Field { +public object DiffExpressionAlgebra : ExpressionAlgebra, Field { override fun variable(name: String, default: Double?): DiffExpression = DiffExpression { variable(name, default?.const()) } diff --git a/kmath-core/build.gradle.kts b/kmath-core/build.gradle.kts index 7f9922de4..e315e1640 100644 --- a/kmath-core/build.gradle.kts +++ b/kmath-core/build.gradle.kts @@ -1,6 +1,7 @@ -plugins { id("scientifik.mpp") } +plugins { id("ru.mipt.npm.mpp") } -kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-memory")) } } +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-memory")) + } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt index 341383bfb..c4c823bf2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt @@ -7,14 +7,14 @@ import scientifik.kmath.linear.Point * * @param T the type of element of this domain. */ -interface Domain { +public interface Domain { /** * Checks if the specified point is contained in this domain. */ - operator fun contains(point: Point): Boolean + public operator fun contains(point: Point): Boolean /** * Number of hyperspace dimensions. */ - val dimension: Int + public val dimension: Int } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt index 66798c42f..e118282bf 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt @@ -25,7 +25,7 @@ import scientifik.kmath.structures.indices * * @author Alexander Nozik */ -class HyperSquareDomain(private val lower: RealBuffer, private val upper: RealBuffer) : RealDomain { +public class HyperSquareDomain(private val lower: RealBuffer, private val upper: RealBuffer) : RealDomain { override operator fun contains(point: Point): Boolean = point.indices.all { i -> point[i] in lower[i]..upper[i] diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt index 7507ccd59..b1da63519 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt @@ -22,8 +22,8 @@ import scientifik.kmath.linear.Point * * @author Alexander Nozik */ -interface RealDomain : Domain { - fun nearestInDomain(point: Point): Point +public interface RealDomain : Domain { + public fun nearestInDomain(point: Point): Point /** * The lower edge for the domain going down from point @@ -31,7 +31,7 @@ interface RealDomain : Domain { * @param point * @return */ - fun getLowerBound(num: Int, point: Point): Double? + public fun getLowerBound(num: Int, point: Point): Double? /** * The upper edge of the domain going up from point @@ -39,25 +39,25 @@ interface RealDomain : Domain { * @param point * @return */ - fun getUpperBound(num: Int, point: Point): Double? + public fun getUpperBound(num: Int, point: Point): Double? /** * Global lower edge * @param num * @return */ - fun getLowerBound(num: Int): Double? + public fun getLowerBound(num: Int): Double? /** * Global upper edge * @param num * @return */ - fun getUpperBound(num: Int): Double? + public fun getUpperBound(num: Int): Double? /** * Hyper volume * @return */ - fun volume(): Double + public fun volume(): Double } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt index 595a3dbe7..5c9170663 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt @@ -17,7 +17,7 @@ package scientifik.kmath.domains import scientifik.kmath.linear.Point -class UnconstrainedDomain(override val dimension: Int) : RealDomain { +public class UnconstrainedDomain(override val dimension: Int) : RealDomain { override operator fun contains(point: Point): Boolean = true override fun getLowerBound(num: Int, point: Point): Double? = Double.NEGATIVE_INFINITY diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt index 280dc7d66..5b47476d8 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt @@ -3,8 +3,8 @@ package scientifik.kmath.domains import scientifik.kmath.linear.Point import scientifik.kmath.structures.asBuffer -inline class UnivariateDomain(val range: ClosedFloatingPointRange) : RealDomain { - operator fun contains(d: Double): Boolean = range.contains(d) +public inline class UnivariateDomain(public val range: ClosedFloatingPointRange) : RealDomain { + public operator fun contains(d: Double): Boolean = range.contains(d) override operator fun contains(point: Point): Boolean { require(point.size == 0) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt index fd11c246d..a21735f27 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt @@ -5,45 +5,37 @@ import scientifik.kmath.operations.Algebra /** * An elementary function that could be invoked on a map of arguments */ -interface Expression { +public fun interface Expression { /** * Calls this expression from arguments. * * @param arguments the map of arguments. * @return the value. */ - operator fun invoke(arguments: Map): T + public operator fun invoke(arguments: Map): T - companion object + public companion object } -/** - * Create simple lazily evaluated expression inside given algebra - */ -fun Algebra.expression(block: Algebra.(arguments: Map) -> T): Expression = - object : Expression { - override operator fun invoke(arguments: Map): T = block(arguments) - } - /** * Calls this expression from arguments. * * @param pairs the pair of arguments' names to values. * @return the value. */ -operator fun Expression.invoke(vararg pairs: Pair): T = invoke(mapOf(*pairs)) +public operator fun Expression.invoke(vararg pairs: Pair): T = invoke(mapOf(*pairs)) /** * A context for expression construction */ -interface ExpressionAlgebra : Algebra { +public interface ExpressionAlgebra : Algebra { /** * Introduce a variable into expression context */ - fun variable(name: String, default: T? = null): E + public fun variable(name: String, default: T? = null): E /** * A constant expression which does not depend on arguments */ - fun const(value: T): E + public fun const(value: T): E } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt index d36c31a0d..58f874671 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt @@ -39,7 +39,8 @@ internal class FunctionalConstProductExpression( * * @param algebra The algebra to provide for Expressions built. */ -abstract class FunctionalExpressionAlgebra>(val algebra: A) : ExpressionAlgebra> { +public abstract class FunctionalExpressionAlgebra>(public val algebra: A) : + ExpressionAlgebra> { /** * Builds an Expression of constant expression which does not depend on arguments. */ @@ -66,7 +67,7 @@ abstract class FunctionalExpressionAlgebra>(val algebra: A) : /** * A context class for [Expression] construction for [Space] algebras. */ -open class FunctionalExpressionSpace>(algebra: A) : +public open class FunctionalExpressionSpace>(algebra: A) : FunctionalExpressionAlgebra(algebra), Space> { override val zero: Expression get() = const(algebra.zero) @@ -82,10 +83,10 @@ open class FunctionalExpressionSpace>(algebra: A) : override fun multiply(a: Expression, k: Number): Expression = FunctionalConstProductExpression(algebra, a, k) - operator fun Expression.plus(arg: T): Expression = this + const(arg) - operator fun Expression.minus(arg: T): Expression = this - const(arg) - operator fun T.plus(arg: Expression): Expression = arg + this - operator fun T.minus(arg: Expression): Expression = arg - this + public operator fun Expression.plus(arg: T): Expression = this + const(arg) + public operator fun Expression.minus(arg: T): Expression = this - const(arg) + public operator fun T.plus(arg: Expression): Expression = arg + this + public operator fun T.minus(arg: Expression): Expression = arg - this override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) @@ -94,7 +95,7 @@ open class FunctionalExpressionSpace>(algebra: A) : super.binaryOperation(operation, left, right) } -open class FunctionalExpressionRing(algebra: A) : FunctionalExpressionSpace(algebra), +public open class FunctionalExpressionRing(algebra: A) : FunctionalExpressionSpace(algebra), Ring> where A : Ring, A : NumericAlgebra { override val one: Expression get() = const(algebra.one) @@ -105,8 +106,8 @@ open class FunctionalExpressionRing(algebra: A) : FunctionalExpressionSpac override fun multiply(a: Expression, b: Expression): Expression = binaryOperation(RingOperations.TIMES_OPERATION, a, b) - operator fun Expression.times(arg: T): Expression = this * const(arg) - operator fun T.times(arg: Expression): Expression = arg * this + public operator fun Expression.times(arg: T): Expression = this * const(arg) + public operator fun T.times(arg: Expression): Expression = arg * this override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) @@ -115,7 +116,7 @@ open class FunctionalExpressionRing(algebra: A) : FunctionalExpressionSpac super.binaryOperation(operation, left, right) } -open class FunctionalExpressionField(algebra: A) : +public open class FunctionalExpressionField(algebra: A) : FunctionalExpressionRing(algebra), Field> where A : Field, A : NumericAlgebra { /** @@ -124,8 +125,8 @@ open class FunctionalExpressionField(algebra: A) : override fun divide(a: Expression, b: Expression): Expression = binaryOperation(FieldOperations.DIV_OPERATION, a, b) - operator fun Expression.div(arg: T): Expression = this / const(arg) - operator fun T.div(arg: Expression): Expression = arg / this + public operator fun Expression.div(arg: T): Expression = this / const(arg) + public operator fun T.div(arg: Expression): Expression = arg / this override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) @@ -134,7 +135,7 @@ open class FunctionalExpressionField(algebra: A) : super.binaryOperation(operation, left, right) } -open class FunctionalExpressionExtendedField(algebra: A) : +public open class FunctionalExpressionExtendedField(algebra: A) : FunctionalExpressionField(algebra), ExtendedField> where A : ExtendedField, A : NumericAlgebra { override fun sin(arg: Expression): Expression = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg) @@ -156,14 +157,14 @@ open class FunctionalExpressionExtendedField(algebra: A) : super.binaryOperation(operation, left, right) } -inline fun > A.expressionInSpace(block: FunctionalExpressionSpace.() -> Expression): Expression = +public inline fun > A.expressionInSpace(block: FunctionalExpressionSpace.() -> Expression): Expression = FunctionalExpressionSpace(this).block() -inline fun > A.expressionInRing(block: FunctionalExpressionRing.() -> Expression): Expression = +public inline fun > A.expressionInRing(block: FunctionalExpressionRing.() -> Expression): Expression = FunctionalExpressionRing(this).block() -inline fun > A.expressionInField(block: FunctionalExpressionField.() -> Expression): Expression = +public inline fun > A.expressionInField(block: FunctionalExpressionField.() -> Expression): Expression = FunctionalExpressionField(this).block() -inline fun > A.expressionInExtendedField(block: FunctionalExpressionExtendedField.() -> Expression): Expression = +public inline fun > A.expressionInExtendedField(block: FunctionalExpressionExtendedField.() -> Expression): Expression = FunctionalExpressionExtendedField(this).block() diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt similarity index 65% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt rename to kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt index 8d0b82a89..737f94b38 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt @@ -11,7 +11,7 @@ import kotlin.contracts.contract /** * Creates a functional expression with this [Space]. */ -inline fun Space.spaceExpression(block: FunctionalExpressionSpace>.() -> Expression): Expression { +public inline fun Space.spaceExpression(block: FunctionalExpressionSpace>.() -> Expression): Expression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return FunctionalExpressionSpace(this).block() } @@ -19,7 +19,7 @@ inline fun Space.spaceExpression(block: FunctionalExpressionSpace Ring.ringExpression(block: FunctionalExpressionRing>.() -> Expression): Expression { +public inline fun Ring.ringExpression(block: FunctionalExpressionRing>.() -> Expression): Expression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return FunctionalExpressionRing(this).block() } @@ -27,7 +27,7 @@ inline fun Ring.ringExpression(block: FunctionalExpressionRing /** * Creates a functional expression with this [Field]. */ -inline fun Field.fieldExpression(block: FunctionalExpressionField>.() -> Expression): Expression { +public inline fun Field.fieldExpression(block: FunctionalExpressionField>.() -> Expression): Expression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return FunctionalExpressionField(this).block() } @@ -35,7 +35,7 @@ inline fun Field.fieldExpression(block: FunctionalExpressionField ExtendedField.extendedFieldExpression(block: FunctionalExpressionExtendedField>.() -> Expression): Expression { +public inline fun ExtendedField.extendedFieldExpression(block: FunctionalExpressionExtendedField>.() -> Expression): Expression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return FunctionalExpressionExtendedField(this).block() } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt index 343b8287e..c28cc5ab7 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt @@ -7,7 +7,7 @@ import scientifik.kmath.structures.* /** * Basic implementation of Matrix space based on [NDStructure] */ -class BufferMatrixContext>( +public class BufferMatrixContext>( override val elementContext: R, private val bufferFactory: BufferFactory ) : GenericMatrixContext { @@ -19,11 +19,11 @@ class BufferMatrixContext>( override fun point(size: Int, initializer: (Int) -> T): Point = bufferFactory(size, initializer) - companion object + public companion object } @Suppress("OVERRIDE_BY_INLINE") -object RealMatrixContext : GenericMatrixContext { +public object RealMatrixContext : GenericMatrixContext { override val elementContext: RealField get() = RealField @@ -35,10 +35,10 @@ object RealMatrixContext : GenericMatrixContext { override inline fun point(size: Int, initializer: (Int) -> Double): Point = RealBuffer(size, initializer) } -class BufferMatrix( +public class BufferMatrix( override val rowNum: Int, override val colNum: Int, - val buffer: Buffer, + public val buffer: Buffer, override val features: Set = emptySet() ) : FeaturedMatrix { @@ -90,7 +90,7 @@ class BufferMatrix( /** * Optimized dot product for real matrices */ -infix fun BufferMatrix.dot(other: BufferMatrix): BufferMatrix { +public infix fun BufferMatrix.dot(other: BufferMatrix): BufferMatrix { require(colNum == other.rowNum) { "Matrix dot operation dimension mismatch: ($rowNum, $colNum) x (${other.rowNum}, ${other.colNum})" } val array = DoubleArray(this.rowNum * other.colNum) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt index 9b60bf719..3e5116435 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt @@ -11,11 +11,9 @@ import kotlin.math.sqrt /** * A 2d structure plus optional matrix-specific features */ -interface FeaturedMatrix : Matrix { - +public interface FeaturedMatrix : Matrix { override val shape: IntArray get() = intArrayOf(rowNum, colNum) - - val features: Set + public val features: Set /** * Suggest new feature for this matrix. The result is the new matrix that may or may not reuse existing data structure. @@ -23,12 +21,12 @@ interface FeaturedMatrix : Matrix { * The implementation does not guarantee to check that matrix actually have the feature, so one should be careful to * add only those features that are valid. */ - fun suggestFeature(vararg features: MatrixFeature): FeaturedMatrix + public fun suggestFeature(vararg features: MatrixFeature): FeaturedMatrix - companion object + public companion object } -inline fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double): Matrix { +public inline fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double): Matrix { contract { callsInPlace(initializer) } return MatrixContext.real.produce(rows, columns, initializer) } @@ -36,31 +34,31 @@ inline fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int /** * Build a square matrix from given elements. */ -fun Structure2D.Companion.square(vararg elements: T): FeaturedMatrix { +public fun Structure2D.Companion.square(vararg elements: T): FeaturedMatrix { val size: Int = sqrt(elements.size.toDouble()).toInt() require(size * size == elements.size) { "The number of elements ${elements.size} is not a full square" } val buffer = elements.asBuffer() return BufferMatrix(size, size, buffer) } -val Matrix<*>.features: Set get() = (this as? FeaturedMatrix)?.features ?: emptySet() +public val Matrix<*>.features: Set get() = (this as? FeaturedMatrix)?.features ?: emptySet() /** * Check if matrix has the given feature class */ -inline fun Matrix<*>.hasFeature(): Boolean = +public inline fun Matrix<*>.hasFeature(): Boolean = features.find { it is T } != null /** * Get the first feature matching given class. Does not guarantee that matrix has only one feature matching the criteria */ -inline fun Matrix<*>.getFeature(): T? = +public inline fun Matrix<*>.getFeature(): T? = features.filterIsInstance().firstOrNull() /** * Diagonal matrix of ones. The matrix is virtual no actual matrix is created */ -fun > GenericMatrixContext.one(rows: Int, columns: Int): FeaturedMatrix = +public fun > GenericMatrixContext.one(rows: Int, columns: Int): FeaturedMatrix = VirtualMatrix(rows, columns, DiagonalFeature) { i, j -> if (i == j) elementContext.one else elementContext.zero } @@ -69,20 +67,20 @@ fun > GenericMatrixContext.one(rows: Int, columns: In /** * A virtual matrix of zeroes */ -fun > GenericMatrixContext.zero(rows: Int, columns: Int): FeaturedMatrix = +public fun > GenericMatrixContext.zero(rows: Int, columns: Int): FeaturedMatrix = VirtualMatrix(rows, columns) { _, _ -> elementContext.zero } -class TransposedFeature(val original: Matrix) : MatrixFeature +public class TransposedFeature(public val original: Matrix) : MatrixFeature /** * Create a virtual transposed matrix without copying anything. `A.transpose().transpose() === A` */ -fun Matrix.transpose(): Matrix { - return this.getFeature>()?.original ?: VirtualMatrix( - this.colNum, - this.rowNum, +public fun Matrix.transpose(): Matrix { + return getFeature>()?.original ?: VirtualMatrix( + colNum, + rowNum, setOf(TransposedFeature(this)) ) { i, j -> get(j, i) } } -infix fun Matrix.dot(other: Matrix): Matrix = with(MatrixContext.real) { dot(other) } +public infix fun Matrix.dot(other: Matrix): Matrix = with(MatrixContext.real) { dot(other) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt index f3e4f648f..2bad1aa46 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt @@ -7,19 +7,20 @@ import scientifik.kmath.operations.invoke import scientifik.kmath.structures.BufferAccessor2D import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.Structure2D +import kotlin.contracts.contract import kotlin.reflect.KClass /** * Common implementation of [LUPDecompositionFeature] */ -class LUPDecomposition( - val context: GenericMatrixContext>, - val lu: Structure2D, - val pivot: IntArray, +public class LUPDecomposition( + public val context: GenericMatrixContext>, + public val lu: Structure2D, + public val pivot: IntArray, private val even: Boolean ) : LUPDecompositionFeature, DeterminantFeature { - - val elementContext: Field get() = context.elementContext + public val elementContext: Field + get() = context.elementContext /** * Returns the matrix L of the decomposition. @@ -44,7 +45,6 @@ class LUPDecomposition( if (j >= i) lu[i, j] else elementContext.zero } - /** * Returns the P rows permutation matrix. * @@ -55,7 +55,6 @@ class LUPDecomposition( if (j == pivot[i]) elementContext.one else elementContext.zero } - /** * Return the determinant of the matrix * @return determinant of the matrix @@ -66,22 +65,19 @@ class LUPDecomposition( } -fun , F : Field> GenericMatrixContext.abs(value: T): T = +public fun , F : Field> GenericMatrixContext.abs(value: T): T = if (value > elementContext.zero) value else elementContext { -value } - /** * Create a lup decomposition of generic matrix */ -fun , F : Field> GenericMatrixContext.lup( +public inline fun , F : Field> GenericMatrixContext.lup( type: KClass, matrix: Matrix, checkSingular: (T) -> Boolean ): LUPDecomposition { - if (matrix.rowNum != matrix.colNum) { - error("LU decomposition supports only square matrices") - } - + contract { callsInPlace(checkSingular) } + require(matrix.rowNum == matrix.colNum) { "LU decomposition supports only square matrices" } val m = matrix.colNum val pivot = IntArray(matrix.rowNum) @@ -154,15 +150,18 @@ fun , F : Field> GenericMatrixContext.lup( } } -inline fun , F : Field> GenericMatrixContext.lup( +public inline fun , F : Field> GenericMatrixContext.lup( matrix: Matrix, - noinline checkSingular: (T) -> Boolean -): LUPDecomposition = lup(T::class, matrix, checkSingular) + checkSingular: (T) -> Boolean +): LUPDecomposition { + contract { callsInPlace(checkSingular) } + return lup(T::class, matrix, checkSingular) +} -fun GenericMatrixContext.lup(matrix: Matrix): LUPDecomposition = +public fun GenericMatrixContext.lup(matrix: Matrix): LUPDecomposition = lup(Double::class, matrix) { it < 1e-11 } -fun LUPDecomposition.solve(type: KClass, matrix: Matrix): Matrix { +public fun LUPDecomposition.solve(type: KClass, matrix: Matrix): Matrix { require(matrix.rowNum == pivot.size) { "Matrix dimension mismatch. Expected ${pivot.size}, but got ${matrix.colNum}" } BufferAccessor2D(type, matrix.rowNum, matrix.colNum).run { @@ -207,27 +206,31 @@ fun LUPDecomposition.solve(type: KClass, matrix: Matrix): Mat } } -inline fun LUPDecomposition.solve(matrix: Matrix): Matrix = solve(T::class, matrix) +public inline fun LUPDecomposition.solve(matrix: Matrix): Matrix = solve(T::class, matrix) /** * Solve a linear equation **a*x = b** */ -inline fun , F : Field> GenericMatrixContext.solve( +public inline fun , F : Field> GenericMatrixContext.solve( a: Matrix, b: Matrix, - noinline checkSingular: (T) -> Boolean + checkSingular: (T) -> Boolean ): Matrix { + contract { callsInPlace(checkSingular) } // Use existing decomposition if it is provided by matrix val decomposition = a.getFeature() ?: lup(T::class, a, checkSingular) return decomposition.solve(T::class, b) } -fun RealMatrixContext.solve(a: Matrix, b: Matrix): Matrix = solve(a, b) { it < 1e-11 } +public fun RealMatrixContext.solve(a: Matrix, b: Matrix): Matrix = solve(a, b) { it < 1e-11 } -inline fun , F : Field> GenericMatrixContext.inverse( +public inline fun , F : Field> GenericMatrixContext.inverse( matrix: Matrix, - noinline checkSingular: (T) -> Boolean -): Matrix = solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular) + checkSingular: (T) -> Boolean +): Matrix { + contract { callsInPlace(checkSingular) } + return solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular) +} -fun RealMatrixContext.inverse(matrix: Matrix): Matrix = +public fun RealMatrixContext.inverse(matrix: Matrix): Matrix = solve(matrix, one(matrix.rowNum, matrix.colNum)) { it < 1e-11 } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt index fb49d18ed..4daa03e5d 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt @@ -4,25 +4,25 @@ import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.VirtualBuffer -typealias Point = Buffer +public typealias Point = Buffer /** * A group of methods to resolve equation A dot X = B, where A and B are matrices or vectors */ -interface LinearSolver { - fun solve(a: Matrix, b: Matrix): Matrix - fun solve(a: Matrix, b: Point): Point = solve(a, b.asMatrix()).asPoint() - fun inverse(a: Matrix): Matrix +public interface LinearSolver { + public fun solve(a: Matrix, b: Matrix): Matrix + public fun solve(a: Matrix, b: Point): Point = solve(a, b.asMatrix()).asPoint() + public fun inverse(a: Matrix): Matrix } /** * Convert matrix to vector if it is possible */ -fun Matrix.asPoint(): Point = +public fun Matrix.asPoint(): Point = if (this.colNum == 1) { VirtualBuffer(rowNum) { get(it, 0) } } else { error("Can't convert matrix with more than one column to vector") } -fun Point.asMatrix(): VirtualMatrix = VirtualMatrix(size, 1) { i, _ -> get(i) } +public fun Point.asMatrix(): VirtualMatrix = VirtualMatrix(size, 1) { i, _ -> get(i) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt index 390362f8c..5efa53bc2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt @@ -5,8 +5,8 @@ import scientifik.kmath.structures.BufferFactory import scientifik.kmath.structures.Structure2D import scientifik.kmath.structures.asBuffer -class MatrixBuilder(val rows: Int, val columns: Int) { - operator fun invoke(vararg elements: T): FeaturedMatrix { +public class MatrixBuilder(public val rows: Int, public val columns: Int) { + public operator fun invoke(vararg elements: T): FeaturedMatrix { require(rows * columns == elements.size) { "The number of elements ${elements.size} is not equal $rows * $columns" } val buffer = elements.asBuffer() return BufferMatrix(rows, columns, buffer) @@ -15,14 +15,14 @@ class MatrixBuilder(val rows: Int, val columns: Int) { //TODO add specific matrix builder functions like diagonal, etc } -fun Structure2D.Companion.build(rows: Int, columns: Int): MatrixBuilder = MatrixBuilder(rows, columns) +public fun Structure2D.Companion.build(rows: Int, columns: Int): MatrixBuilder = MatrixBuilder(rows, columns) -fun Structure2D.Companion.row(vararg values: T): FeaturedMatrix { +public fun Structure2D.Companion.row(vararg values: T): FeaturedMatrix { val buffer = values.asBuffer() return BufferMatrix(1, values.size, buffer) } -inline fun Structure2D.Companion.row( +public inline fun Structure2D.Companion.row( size: Int, factory: BufferFactory = Buffer.Companion::auto, noinline builder: (Int) -> T @@ -31,12 +31,12 @@ inline fun Structure2D.Companion.row( return BufferMatrix(1, size, buffer) } -fun Structure2D.Companion.column(vararg values: T): FeaturedMatrix { +public fun Structure2D.Companion.column(vararg values: T): FeaturedMatrix { val buffer = values.asBuffer() return BufferMatrix(values.size, 1, buffer) } -inline fun Structure2D.Companion.column( +public inline fun Structure2D.Companion.column( size: Int, factory: BufferFactory = Buffer.Companion::auto, noinline builder: (Int) -> T diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt index 763bb1615..13d4e68b9 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt @@ -12,30 +12,31 @@ import scientifik.kmath.structures.asSequence /** * Basic operations on matrices. Operates on [Matrix] */ -interface MatrixContext : SpaceOperations> { +public interface MatrixContext : SpaceOperations> { /** * Produce a matrix with this context and given dimensions */ - fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): Matrix + public fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): Matrix - infix fun Matrix.dot(other: Matrix): Matrix + public infix fun Matrix.dot(other: Matrix): Matrix - infix fun Matrix.dot(vector: Point): Point + public infix fun Matrix.dot(vector: Point): Point - operator fun Matrix.times(value: T): Matrix + public operator fun Matrix.times(value: T): Matrix - operator fun T.times(m: Matrix): Matrix = m * this + public operator fun T.times(m: Matrix): Matrix = m * this - companion object { + public companion object { /** * Non-boxing double matrix */ - val real: RealMatrixContext = RealMatrixContext + public val real: RealMatrixContext + get() = RealMatrixContext /** * A structured matrix with custom buffer */ - fun > buffered( + public fun > buffered( ring: R, bufferFactory: BufferFactory = Buffer.Companion::boxing ): GenericMatrixContext = BufferMatrixContext(ring, bufferFactory) @@ -43,21 +44,21 @@ interface MatrixContext : SpaceOperations> { /** * Automatic buffered matrix, unboxed if it is possible */ - inline fun > auto(ring: R): GenericMatrixContext = + public inline fun > auto(ring: R): GenericMatrixContext = buffered(ring, Buffer.Companion::auto) } } -interface GenericMatrixContext> : MatrixContext { +public interface GenericMatrixContext> : MatrixContext { /** * The ring context for matrix elements */ - val elementContext: R + public val elementContext: R /** * Produce a point compatible with matrix space */ - fun point(size: Int, initializer: (Int) -> T): Point + public fun point(size: Int, initializer: (Int) -> T): Point override infix fun Matrix.dot(other: Matrix): Matrix { //TODO add typed error @@ -102,7 +103,7 @@ interface GenericMatrixContext> : MatrixContext { override fun multiply(a: Matrix, k: Number): Matrix = produce(a.rowNum, a.colNum) { i, j -> elementContext { a[i, j] * k } } - operator fun Number.times(matrix: FeaturedMatrix): Matrix = matrix * this + public operator fun Number.times(matrix: FeaturedMatrix): Matrix = matrix * this override operator fun Matrix.times(value: T): Matrix = produce(rowNum, colNum) { i, j -> elementContext { get(i, j) * value } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt index 87cfe21b0..3448a2e7c 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt @@ -4,59 +4,59 @@ package scientifik.kmath.linear * A marker interface representing some matrix feature like diagonal, sparse, zero, etc. Features used to optimize matrix * operations performance in some cases. */ -interface MatrixFeature +public interface MatrixFeature /** * The matrix with this feature is considered to have only diagonal non-null elements */ -object DiagonalFeature : MatrixFeature +public object DiagonalFeature : MatrixFeature /** * Matrix with this feature has all zero elements */ -object ZeroFeature : MatrixFeature +public object ZeroFeature : MatrixFeature /** * Matrix with this feature have unit elements on diagonal and zero elements in all other places */ -object UnitFeature : MatrixFeature +public object UnitFeature : MatrixFeature /** * Inverted matrix feature */ -interface InverseMatrixFeature : MatrixFeature { - val inverse: FeaturedMatrix +public interface InverseMatrixFeature : MatrixFeature { + public val inverse: FeaturedMatrix } /** * A determinant container */ -interface DeterminantFeature : MatrixFeature { - val determinant: T +public interface DeterminantFeature : MatrixFeature { + public val determinant: T } @Suppress("FunctionName") -fun DeterminantFeature(determinant: T): DeterminantFeature = object : DeterminantFeature { +public fun DeterminantFeature(determinant: T): DeterminantFeature = object : DeterminantFeature { override val determinant: T = determinant } /** * Lower triangular matrix */ -object LFeature : MatrixFeature +public object LFeature : MatrixFeature /** * Upper triangular feature */ -object UFeature : MatrixFeature +public object UFeature : MatrixFeature /** * TODO add documentation */ -interface LUPDecompositionFeature : MatrixFeature { - val l: FeaturedMatrix - val u: FeaturedMatrix - val p: FeaturedMatrix +public interface LUPDecompositionFeature : MatrixFeature { + public val l: FeaturedMatrix + public val u: FeaturedMatrix + public val p: FeaturedMatrix } //TODO add sparse matrix feature diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt index 82e5c7ef6..a75523f7c 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt @@ -10,12 +10,12 @@ import scientifik.kmath.structures.BufferFactory * A linear space for vectors. * Could be used on any point-like structure */ -interface VectorSpace> : Space> { - val size: Int - val space: S +public interface VectorSpace> : Space> { + public val size: Int + public val space: S override val zero: Point get() = produce { space.zero } - fun produce(initializer: (Int) -> T): Point + public fun produce(initializer: (Int) -> T): Point /** * Produce a space-element of this vector space for expressions @@ -28,13 +28,13 @@ interface VectorSpace> : Space> { //TODO add basis - companion object { + public companion object { private val realSpaceCache: MutableMap> = hashMapOf() /** * Non-boxing double vector space */ - fun real(size: Int): BufferVectorSpace = realSpaceCache.getOrPut(size) { + public fun real(size: Int): BufferVectorSpace = realSpaceCache.getOrPut(size) { BufferVectorSpace( size, RealField, @@ -45,7 +45,7 @@ interface VectorSpace> : Space> { /** * A structured vector space with custom buffer */ - fun > buffered( + public fun > buffered( size: Int, space: S, bufferFactory: BufferFactory = Buffer.Companion::boxing @@ -54,16 +54,16 @@ interface VectorSpace> : Space> { /** * Automatic buffered vector, unboxed if it is possible */ - inline fun > auto(size: Int, space: S): VectorSpace = + public inline fun > auto(size: Int, space: S): VectorSpace = buffered(size, space, Buffer.Companion::auto) } } -class BufferVectorSpace>( +public class BufferVectorSpace>( override val size: Int, override val space: S, - val bufferFactory: BufferFactory + public val bufferFactory: BufferFactory ) : VectorSpace { override fun produce(initializer: (Int) -> T): Buffer = bufferFactory(size, initializer) //override fun produceElement(initializer: (Int) -> T): Vector = BufferVector(this, produce(initializer)) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt index 5266dc884..f6794ce01 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt @@ -2,14 +2,18 @@ package scientifik.kmath.linear import scientifik.kmath.structures.Matrix -class VirtualMatrix( +public class VirtualMatrix( override val rowNum: Int, override val colNum: Int, override val features: Set = emptySet(), - val generator: (i: Int, j: Int) -> T + public val generator: (i: Int, j: Int) -> T ) : FeaturedMatrix { - - constructor(rowNum: Int, colNum: Int, vararg features: MatrixFeature, generator: (i: Int, j: Int) -> T) : this( + public constructor( + rowNum: Int, + colNum: Int, + vararg features: MatrixFeature, + generator: (i: Int, j: Int) -> T + ) : this( rowNum, colNum, setOf(*features), @@ -42,18 +46,15 @@ class VirtualMatrix( } - companion object { + public companion object { /** * Wrap a matrix adding additional features to it */ - fun wrap(matrix: Matrix, vararg features: MatrixFeature): FeaturedMatrix { - return if (matrix is VirtualMatrix) { + public fun wrap(matrix: Matrix, vararg features: MatrixFeature): FeaturedMatrix { + return if (matrix is VirtualMatrix) VirtualMatrix(matrix.rowNum, matrix.colNum, matrix.features + features, matrix.generator) - } else { - VirtualMatrix(matrix.rowNum, matrix.colNum, matrix.features + features) { i, j -> - matrix[i, j] - } - } + else + VirtualMatrix(matrix.rowNum, matrix.colNum, matrix.features + features) { i, j -> matrix[i, j] } } } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index be222783e..6bed19456 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -19,24 +19,24 @@ import kotlin.contracts.contract * Differentiable variable with value and derivative of differentiation ([deriv]) result * with respect to this variable. */ -open class Variable(val value: T) +public open class Variable(public val value: T) -class DerivationResult( +public class DerivationResult( value: T, - val deriv: Map, T>, - val context: Field + public val deriv: Map, T>, + public val context: Field ) : Variable(value) { - fun deriv(variable: Variable): T = deriv[variable] ?: context.zero + public fun deriv(variable: Variable): T = deriv[variable] ?: context.zero /** * compute divergence */ - fun div(): T = context { sum(deriv.values) } + public fun div(): T = context { sum(deriv.values) } /** * Compute a gradient for variables in given order */ - fun grad(vararg variables: Variable): Point { + public fun grad(vararg variables: Variable): Point { check(variables.isNotEmpty()) { "Variable order is not provided for gradient construction" } return variables.map(::deriv).asBuffer() } @@ -55,7 +55,7 @@ class DerivationResult( * assertEquals(9.0, x.d) // dy/dx * ``` */ -inline fun > F.deriv(body: AutoDiffField.() -> Variable): DerivationResult { +public inline fun > F.deriv(body: AutoDiffField.() -> Variable): DerivationResult { contract { callsInPlace(body, InvocationKind.EXACTLY_ONCE) } return (AutoDiffContext(this)) { @@ -67,14 +67,14 @@ inline fun > F.deriv(body: AutoDiffField.() -> Varia } -abstract class AutoDiffField> : Field> { - abstract val context: F +public abstract class AutoDiffField> : Field> { + public abstract val context: F /** * A variable accessing inner state of derivatives. * Use this function in inner builders to avoid creating additional derivative bindings */ - abstract var Variable.d: T + public abstract var Variable.d: T /** * Performs update of derivative after the rest of the formula in the back-pass. @@ -87,11 +87,11 @@ abstract class AutoDiffField> : Field> { * } * ``` */ - abstract fun derive(value: R, block: F.(R) -> Unit): R + public abstract fun derive(value: R, block: F.(R) -> Unit): R - abstract fun variable(value: T): Variable + public abstract fun variable(value: T): Variable - inline fun variable(block: F.() -> T): Variable = variable(context.block()) + public inline fun variable(block: F.() -> T): Variable = variable(context.block()) // Overloads for Double constants @@ -153,7 +153,6 @@ internal class AutoDiffContext>(override val context: F) : // Basic math (+, -, *, /) - override fun add(a: Variable, b: Variable): Variable = derive(variable { a.value + b.value }) { z -> a.d += z.d b.d += z.d @@ -177,35 +176,36 @@ internal class AutoDiffContext>(override val context: F) : // Extensions for differentiation of various basic mathematical functions // x ^ 2 -fun > AutoDiffField.sqr(x: Variable): Variable = +public fun > AutoDiffField.sqr(x: Variable): Variable = derive(variable { x.value * x.value }) { z -> x.d += z.d * 2 * x.value } // x ^ 1/2 -fun > AutoDiffField.sqrt(x: Variable): Variable = +public fun > AutoDiffField.sqrt(x: Variable): Variable = derive(variable { sqrt(x.value) }) { z -> x.d += z.d * 0.5 / z.value } // x ^ y (const) -fun > AutoDiffField.pow(x: Variable, y: Double): Variable = +public fun > AutoDiffField.pow(x: Variable, y: Double): Variable = derive(variable { power(x.value, y) }) { z -> x.d += z.d * y * power(x.value, y - 1) } -fun > AutoDiffField.pow(x: Variable, y: Int): Variable = pow(x, y.toDouble()) +public fun > AutoDiffField.pow(x: Variable, y: Int): Variable = + pow(x, y.toDouble()) // exp(x) -fun > AutoDiffField.exp(x: Variable): Variable = +public fun > AutoDiffField.exp(x: Variable): Variable = derive(variable { exp(x.value) }) { z -> x.d += z.d * z.value } // ln(x) -fun > AutoDiffField.ln(x: Variable): Variable = +public fun > AutoDiffField.ln(x: Variable): Variable = derive(variable { ln(x.value) }) { z -> x.d += z.d / x.value } // x ^ y (any) -fun > AutoDiffField.pow(x: Variable, y: Variable): Variable = +public fun > AutoDiffField.pow(x: Variable, y: Variable): Variable = exp(y * ln(x)) // sin(x) -fun > AutoDiffField.sin(x: Variable): Variable = +public fun > AutoDiffField.sin(x: Variable): Variable = derive(variable { sin(x.value) }) { z -> x.d += z.d * cos(x.value) } // cos(x) -fun > AutoDiffField.cos(x: Variable): Variable = +public fun > AutoDiffField.cos(x: Variable): Variable = derive(variable { cos(x.value) }) { z -> x.d -= z.d * sin(x.value) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt index 1272ddd1c..cf3e93895 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt @@ -10,17 +10,21 @@ import kotlin.math.abs * * If step is negative, the same goes from upper boundary downwards */ -fun ClosedFloatingPointRange.toSequenceWithStep(step: Double): Sequence = when { +public fun ClosedFloatingPointRange.toSequenceWithStep(step: Double): Sequence = when { step == 0.0 -> error("Zero step in double progression") + step > 0 -> sequence { var current = start + while (current <= endInclusive) { yield(current) current += step } } + else -> sequence { var current = endInclusive + while (current >= start) { yield(current) current += step @@ -31,7 +35,7 @@ fun ClosedFloatingPointRange.toSequenceWithStep(step: Double): Sequence< /** * Convert double range to sequence with the fixed number of points */ -fun ClosedFloatingPointRange.toSequenceWithPoints(numPoints: Int): Sequence { +public fun ClosedFloatingPointRange.toSequenceWithPoints(numPoints: Int): Sequence { require(numPoints > 1) { "The number of points should be more than 2" } return toSequenceWithStep(abs(endInclusive - start) / (numPoints - 1)) } @@ -40,7 +44,7 @@ fun ClosedFloatingPointRange.toSequenceWithPoints(numPoints: Int): Seque * Convert double range to array of evenly spaced doubles, where the size of array equals [numPoints] */ @Deprecated("Replace by 'toSequenceWithPoints'") -fun ClosedFloatingPointRange.toGrid(numPoints: Int): DoubleArray { +public fun ClosedFloatingPointRange.toGrid(numPoints: Int): DoubleArray { require(numPoints >= 2) { "Can't create generic grid with less than two points" } return DoubleArray(numPoints) { i -> start + (endInclusive - start) / (numPoints - 1) * i } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt index e11adc135..f7dfcd781 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt @@ -2,7 +2,6 @@ package scientifik.kmath.misc import scientifik.kmath.operations.Space import scientifik.kmath.operations.invoke -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.jvm.JvmName @@ -13,7 +12,7 @@ import kotlin.jvm.JvmName * @param R the type of resulting iterable. * @param initial lazy evaluated. */ -inline fun Iterator.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterator { +public inline fun Iterator.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterator { contract { callsInPlace(operation) } return object : Iterator { @@ -28,14 +27,13 @@ inline fun Iterator.cumulative(initial: R, crossinline operation: (R, } } -inline fun Iterable.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterable = +public inline fun Iterable.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterable = Iterable { this@cumulative.iterator().cumulative(initial, operation) } -inline fun Sequence.cumulative(initial: R, crossinline operation: (R, T) -> R): Sequence = Sequence { - this@cumulative.iterator().cumulative(initial, operation) -} +public inline fun Sequence.cumulative(initial: R, crossinline operation: (R, T) -> R): Sequence = + Sequence { this@cumulative.iterator().cumulative(initial, operation) } -fun List.cumulative(initial: R, operation: (R, T) -> R): List = +public fun List.cumulative(initial: R, operation: (R, T) -> R): List = iterator().cumulative(initial, operation).asSequence().toList() //Cumulative sum @@ -43,38 +41,38 @@ fun List.cumulative(initial: R, operation: (R, T) -> R): List = /** * Cumulative sum with custom space */ -fun Iterable.cumulativeSum(space: Space): Iterable = +public fun Iterable.cumulativeSum(space: Space): Iterable = space { cumulative(zero) { element: T, sum: T -> sum + element } } @JvmName("cumulativeSumOfDouble") -fun Iterable.cumulativeSum(): Iterable = cumulative(0.0) { element, sum -> sum + element } +public fun Iterable.cumulativeSum(): Iterable = cumulative(0.0) { element, sum -> sum + element } @JvmName("cumulativeSumOfInt") -fun Iterable.cumulativeSum(): Iterable = cumulative(0) { element, sum -> sum + element } +public fun Iterable.cumulativeSum(): Iterable = cumulative(0) { element, sum -> sum + element } @JvmName("cumulativeSumOfLong") -fun Iterable.cumulativeSum(): Iterable = cumulative(0L) { element, sum -> sum + element } +public fun Iterable.cumulativeSum(): Iterable = cumulative(0L) { element, sum -> sum + element } -fun Sequence.cumulativeSum(space: Space): Sequence = +public fun Sequence.cumulativeSum(space: Space): Sequence = space { cumulative(zero) { element: T, sum: T -> sum + element } } @JvmName("cumulativeSumOfDouble") -fun Sequence.cumulativeSum(): Sequence = cumulative(0.0) { element, sum -> sum + element } +public fun Sequence.cumulativeSum(): Sequence = cumulative(0.0) { element, sum -> sum + element } @JvmName("cumulativeSumOfInt") -fun Sequence.cumulativeSum(): Sequence = cumulative(0) { element, sum -> sum + element } +public fun Sequence.cumulativeSum(): Sequence = cumulative(0) { element, sum -> sum + element } @JvmName("cumulativeSumOfLong") -fun Sequence.cumulativeSum(): Sequence = cumulative(0L) { element, sum -> sum + element } +public fun Sequence.cumulativeSum(): Sequence = cumulative(0L) { element, sum -> sum + element } -fun List.cumulativeSum(space: Space): List = +public fun List.cumulativeSum(space: Space): List = space { cumulative(zero) { element: T, sum: T -> sum + element } } @JvmName("cumulativeSumOfDouble") -fun List.cumulativeSum(): List = cumulative(0.0) { element, sum -> sum + element } +public fun List.cumulativeSum(): List = cumulative(0.0) { element, sum -> sum + element } @JvmName("cumulativeSumOfInt") -fun List.cumulativeSum(): List = cumulative(0) { element, sum -> sum + element } +public fun List.cumulativeSum(): List = cumulative(0) { element, sum -> sum + element } @JvmName("cumulativeSumOfLong") -fun List.cumulativeSum(): List = cumulative(0L) { element, sum -> sum + element } +public fun List.cumulativeSum(): List = cumulative(0L) { element, sum -> sum + element } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt index f18bde597..40f974096 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt @@ -4,28 +4,28 @@ package scientifik.kmath.operations * Stub for DSL the [Algebra] is. */ @DslMarker -annotation class KMathContext +public annotation class KMathContext /** * Represents an algebraic structure. * * @param T the type of element of this structure. */ -interface Algebra { +public interface Algebra { /** * Wrap raw string or variable */ - fun symbol(value: String): T = error("Wrapping of '$value' is not supported in $this") + public fun symbol(value: String): T = error("Wrapping of '$value' is not supported in $this") /** * Dynamic call of unary operation with name [operation] on [arg] */ - fun unaryOperation(operation: String, arg: T): T + public fun unaryOperation(operation: String, arg: T): T /** * Dynamic call of binary operation [operation] on [left] and [right] */ - fun binaryOperation(operation: String, left: T, right: T): T + public fun binaryOperation(operation: String, left: T, right: T): T } /** @@ -33,29 +33,30 @@ interface Algebra { * * @param T the type of element of this structure. */ -interface NumericAlgebra : Algebra { +public interface NumericAlgebra : Algebra { /** * Wraps a number. */ - fun number(value: Number): T + public fun number(value: Number): T /** * Dynamic call of binary operation [operation] on [left] and [right] where left element is [Number]. */ - fun leftSideNumberOperation(operation: String, left: Number, right: T): T = + public fun leftSideNumberOperation(operation: String, left: Number, right: T): T = binaryOperation(operation, number(left), right) /** * Dynamic call of binary operation [operation] on [left] and [right] where right element is [Number]. */ - fun rightSideNumberOperation(operation: String, left: T, right: Number): T = + public fun rightSideNumberOperation(operation: String, left: T, right: Number): T = leftSideNumberOperation(operation, right, left) } /** * Call a block with an [Algebra] as receiver. */ -inline operator fun , R> A.invoke(block: A.() -> R): R = run(block) +// TODO add contract when KT-32313 is fixed +public inline operator fun , R> A.invoke(block: A.() -> R): R = block() /** * Represents "semispace", i.e. algebraic structure with associative binary operation called "addition" as well as @@ -63,7 +64,7 @@ inline operator fun , R> A.invoke(block: A.() -> R): R = run(bloc * * @param T the type of element of this semispace. */ -interface SpaceOperations : Algebra { +public interface SpaceOperations : Algebra { /** * Addition of two elements. * @@ -71,7 +72,7 @@ interface SpaceOperations : Algebra { * @param b the augend. * @return the sum. */ - fun add(a: T, b: T): T + public fun add(a: T, b: T): T /** * Multiplication of element by scalar. @@ -80,7 +81,7 @@ interface SpaceOperations : Algebra { * @param k the multiplicand. * @return the produce. */ - fun multiply(a: T, k: Number): T + public fun multiply(a: T, k: Number): T // Operations to be performed in this context. Could be moved to extensions in case of KEEP-176 @@ -90,7 +91,7 @@ interface SpaceOperations : Algebra { * @receiver this value. * @return the additive inverse of this value. */ - operator fun T.unaryMinus(): T = multiply(this, -1.0) + public operator fun T.unaryMinus(): T = multiply(this, -1.0) /** * Returns this value. @@ -98,7 +99,7 @@ interface SpaceOperations : Algebra { * @receiver this value. * @return this value. */ - operator fun T.unaryPlus(): T = this + public operator fun T.unaryPlus(): T = this /** * Addition of two elements. @@ -107,7 +108,7 @@ interface SpaceOperations : Algebra { * @param b the augend. * @return the sum. */ - operator fun T.plus(b: T): T = add(this, b) + public operator fun T.plus(b: T): T = add(this, b) /** * Subtraction of two elements. @@ -116,7 +117,7 @@ interface SpaceOperations : Algebra { * @param b the subtrahend. * @return the difference. */ - operator fun T.minus(b: T): T = add(this, -b) + public operator fun T.minus(b: T): T = add(this, -b) /** * Multiplication of this element by a scalar. @@ -125,7 +126,7 @@ interface SpaceOperations : Algebra { * @param k the multiplicand. * @return the product. */ - operator fun T.times(k: Number): T = multiply(this, k.toDouble()) + public operator fun T.times(k: Number): T = multiply(this, k.toDouble()) /** * Division of this element by scalar. @@ -134,7 +135,7 @@ interface SpaceOperations : Algebra { * @param k the divisor. * @return the quotient. */ - operator fun T.div(k: Number): T = multiply(this, 1.0 / k.toDouble()) + public operator fun T.div(k: Number): T = multiply(this, 1.0 / k.toDouble()) /** * Multiplication of this number by element. @@ -143,7 +144,7 @@ interface SpaceOperations : Algebra { * @param b the multiplicand. * @return the product. */ - operator fun Number.times(b: T): T = b * this + public operator fun Number.times(b: T): T = b * this override fun unaryOperation(operation: String, arg: T): T = when (operation) { PLUS_OPERATION -> arg @@ -157,18 +158,16 @@ interface SpaceOperations : Algebra { else -> error("Binary operation $operation not defined in $this") } - companion object { + public companion object { /** * The identifier of addition. */ - const val PLUS_OPERATION: String = "+" + public const val PLUS_OPERATION: String = "+" /** * The identifier of subtraction (and negation). */ - const val MINUS_OPERATION: String = "-" - - const val NOT_OPERATION: String = "!" + public const val MINUS_OPERATION: String = "-" } } @@ -178,11 +177,11 @@ interface SpaceOperations : Algebra { * * @param T the type of element of this group. */ -interface Space : SpaceOperations { +public interface Space : SpaceOperations { /** * The neutral element of addition. */ - val zero: T + public val zero: T } /** @@ -191,14 +190,14 @@ interface Space : SpaceOperations { * * @param T the type of element of this semiring. */ -interface RingOperations : SpaceOperations { +public interface RingOperations : SpaceOperations { /** * Multiplies two elements. * * @param a the multiplier. * @param b the multiplicand. */ - fun multiply(a: T, b: T): T + public fun multiply(a: T, b: T): T /** * Multiplies this element by scalar. @@ -206,18 +205,18 @@ interface RingOperations : SpaceOperations { * @receiver the multiplier. * @param b the multiplicand. */ - operator fun T.times(b: T): T = multiply(this, b) + public operator fun T.times(b: T): T = multiply(this, b) override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) { TIMES_OPERATION -> multiply(left, right) else -> super.binaryOperation(operation, left, right) } - companion object { + public companion object { /** * The identifier of multiplication. */ - const val TIMES_OPERATION: String = "*" + public const val TIMES_OPERATION: String = "*" } } @@ -227,11 +226,11 @@ interface RingOperations : SpaceOperations { * * @param T the type of element of this ring. */ -interface Ring : Space, RingOperations, NumericAlgebra { +public interface Ring : Space, RingOperations, NumericAlgebra { /** * neutral operation for multiplication */ - val one: T + public val one: T override fun number(value: Number): T = one * value.toDouble() @@ -255,7 +254,7 @@ interface Ring : Space, RingOperations, NumericAlgebra { * @receiver the addend. * @param b the augend. */ - operator fun T.plus(b: Number): T = this + number(b) + public operator fun T.plus(b: Number): T = this + number(b) /** * Addition of scalar and element. @@ -263,7 +262,7 @@ interface Ring : Space, RingOperations, NumericAlgebra { * @receiver the addend. * @param b the augend. */ - operator fun Number.plus(b: T): T = b + this + public operator fun Number.plus(b: T): T = b + this /** * Subtraction of element from number. @@ -272,7 +271,7 @@ interface Ring : Space, RingOperations, NumericAlgebra { * @param b the subtrahend. * @receiver the difference. */ - operator fun T.minus(b: Number): T = this - number(b) + public operator fun T.minus(b: Number): T = this - number(b) /** * Subtraction of number from element. @@ -281,7 +280,7 @@ interface Ring : Space, RingOperations, NumericAlgebra { * @param b the subtrahend. * @receiver the difference. */ - operator fun Number.minus(b: T): T = -b + this + public operator fun Number.minus(b: T): T = -b + this } /** @@ -290,7 +289,7 @@ interface Ring : Space, RingOperations, NumericAlgebra { * * @param T the type of element of this semifield. */ -interface FieldOperations : RingOperations { +public interface FieldOperations : RingOperations { /** * Division of two elements. * @@ -298,7 +297,7 @@ interface FieldOperations : RingOperations { * @param b the divisor. * @return the quotient. */ - fun divide(a: T, b: T): T + public fun divide(a: T, b: T): T /** * Division of two elements. @@ -307,18 +306,18 @@ interface FieldOperations : RingOperations { * @param b the divisor. * @return the quotient. */ - operator fun T.div(b: T): T = divide(this, b) + public operator fun T.div(b: T): T = divide(this, b) override fun binaryOperation(operation: String, left: T, right: T): T = when (operation) { DIV_OPERATION -> divide(left, right) else -> super.binaryOperation(operation, left, right) } - companion object { + public companion object { /** * The identifier of division. */ - const val DIV_OPERATION: String = "/" + public const val DIV_OPERATION: String = "/" } } @@ -328,7 +327,7 @@ interface FieldOperations : RingOperations { * * @param T the type of element of this semifield. */ -interface Field : Ring, FieldOperations { +public interface Field : Ring, FieldOperations { /** * Division of element by scalar. * @@ -336,5 +335,5 @@ interface Field : Ring, FieldOperations { * @param b the divisor. * @return the quotient. */ - operator fun Number.div(b: T): T = this * divide(one, b) + public operator fun Number.div(b: T): T = this * divide(one, b) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt index 197897c14..4ed1be0ee 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt @@ -5,11 +5,11 @@ package scientifik.kmath.operations * * @param C the type of mathematical context for this element. */ -interface MathElement { +public interface MathElement { /** * The context this element belongs to. */ - val context: C + public val context: C } /** @@ -18,16 +18,16 @@ interface MathElement { * @param T the type wrapped by this wrapper. * @param I the type of this wrapper. */ -interface MathWrapper { +public interface MathWrapper { /** * Unwraps [I] to [T]. */ - fun unwrap(): T + public fun unwrap(): T /** * Wraps [T] to [I]. */ - fun T.wrap(): I + public fun T.wrap(): I } /** @@ -37,14 +37,14 @@ interface MathWrapper { * @param I self type of the element. Needed for static type checking. * @param S the type of space. */ -interface SpaceElement, S : Space> : MathElement, MathWrapper { +public interface SpaceElement, S : Space> : MathElement, MathWrapper { /** * Adds element to this one. * * @param b the augend. * @return the sum. */ - operator fun plus(b: T): I = context.add(unwrap(), b).wrap() + public operator fun plus(b: T): I = context.add(unwrap(), b).wrap() /** * Subtracts element from this one. @@ -52,7 +52,7 @@ interface SpaceElement, S : Space> : MathElement * @param b the subtrahend. * @return the difference. */ - operator fun minus(b: T): I = context.add(unwrap(), context.multiply(b, -1.0)).wrap() + public operator fun minus(b: T): I = context.add(unwrap(), context.multiply(b, -1.0)).wrap() /** * Multiplies this element by number. @@ -60,7 +60,7 @@ interface SpaceElement, S : Space> : MathElement * @param k the multiplicand. * @return the product. */ - operator fun times(k: Number): I = context.multiply(unwrap(), k.toDouble()).wrap() + public operator fun times(k: Number): I = context.multiply(unwrap(), k.toDouble()).wrap() /** * Divides this element by number. @@ -68,7 +68,7 @@ interface SpaceElement, S : Space> : MathElement * @param k the divisor. * @return the quotient. */ - operator fun div(k: Number): I = context.multiply(unwrap(), 1.0 / k.toDouble()).wrap() + public operator fun div(k: Number): I = context.multiply(unwrap(), 1.0 / k.toDouble()).wrap() } /** @@ -78,14 +78,14 @@ interface SpaceElement, S : Space> : MathElement * @param I self type of the element. Needed for static type checking. * @param R the type of space. */ -interface RingElement, R : Ring> : SpaceElement { +public interface RingElement, R : Ring> : SpaceElement { /** * Multiplies this element by another one. * * @param b the multiplicand. * @return the product. */ - operator fun times(b: T): I = context.multiply(unwrap(), b).wrap() + public operator fun times(b: T): I = context.multiply(unwrap(), b).wrap() } /** @@ -95,7 +95,7 @@ interface RingElement, R : Ring> : SpaceElement, F : Field> : RingElement { +public interface FieldElement, F : Field> : RingElement { override val context: F /** @@ -104,5 +104,5 @@ interface FieldElement, F : Field> : RingElement * @param b the divisor. * @return the quotient. */ - operator fun div(b: T): I = context.divide(unwrap(), b).wrap() + public operator fun div(b: T): I = context.divide(unwrap(), b).wrap() } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt index 00b16dc98..b80e7582d 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt @@ -7,7 +7,7 @@ package scientifik.kmath.operations * @param data the iterable to sum up. * @return the sum. */ -fun Space.sum(data: Iterable): T = data.fold(zero) { left, right -> add(left, right) } +public fun Space.sum(data: Iterable): T = data.fold(zero) { left, right -> add(left, right) } /** * Returns the sum of all elements in the sequence in this [Space]. @@ -16,7 +16,7 @@ fun Space.sum(data: Iterable): T = data.fold(zero) { left, right -> ad * @param data the sequence to sum up. * @return the sum. */ -fun Space.sum(data: Sequence): T = data.fold(zero) { left, right -> add(left, right) } +public fun Space.sum(data: Sequence): T = data.fold(zero) { left, right -> add(left, right) } /** * Returns an average value of elements in the iterable in this [Space]. @@ -25,7 +25,7 @@ fun Space.sum(data: Sequence): T = data.fold(zero) { left, right -> ad * @param data the iterable to find average. * @return the average value. */ -fun Space.average(data: Iterable): T = sum(data) / data.count() +public fun Space.average(data: Iterable): T = sum(data) / data.count() /** * Returns an average value of elements in the sequence in this [Space]. @@ -34,7 +34,7 @@ fun Space.average(data: Iterable): T = sum(data) / data.count() * @param data the sequence to find average. * @return the average value. */ -fun Space.average(data: Sequence): T = sum(data) / data.count() +public fun Space.average(data: Sequence): T = sum(data) / data.count() /** * Returns the sum of all elements in the iterable in provided space. @@ -43,7 +43,7 @@ fun Space.average(data: Sequence): T = sum(data) / data.count() * @param space the algebra that provides addition. * @return the sum. */ -fun Iterable.sumWith(space: Space): T = space.sum(this) +public fun Iterable.sumWith(space: Space): T = space.sum(this) /** * Returns the sum of all elements in the sequence in provided space. @@ -52,7 +52,7 @@ fun Iterable.sumWith(space: Space): T = space.sum(this) * @param space the algebra that provides addition. * @return the sum. */ -fun Sequence.sumWith(space: Space): T = space.sum(this) +public fun Sequence.sumWith(space: Space): T = space.sum(this) /** * Returns an average value of elements in the iterable in this [Space]. @@ -61,7 +61,7 @@ fun Sequence.sumWith(space: Space): T = space.sum(this) * @param space the algebra that provides addition and division. * @return the average value. */ -fun Iterable.averageWith(space: Space): T = space.average(this) +public fun Iterable.averageWith(space: Space): T = space.average(this) /** * Returns an average value of elements in the sequence in this [Space]. @@ -70,7 +70,7 @@ fun Iterable.averageWith(space: Space): T = space.average(this) * @param space the algebra that provides addition and division. * @return the average value. */ -fun Sequence.averageWith(space: Space): T = space.average(this) +public fun Sequence.averageWith(space: Space): T = space.average(this) //TODO optimized power operation @@ -82,7 +82,7 @@ fun Sequence.averageWith(space: Space): T = space.average(this) * @param power the exponent. * @return the base raised to the power. */ -fun Ring.power(arg: T, power: Int): T { +public fun Ring.power(arg: T, power: Int): T { require(power >= 0) { "The power can't be negative." } require(power != 0 || arg != zero) { "The $zero raised to $power is not defined." } if (power == 0) return one @@ -99,7 +99,7 @@ fun Ring.power(arg: T, power: Int): T { * @param power the exponent. * @return the base raised to the power. */ -fun Field.power(arg: T, power: Int): T { +public fun Field.power(arg: T, power: Int): T { require(power != 0 || arg != zero) { "The $zero raised to $power is not defined." } if (power == 0) return one if (power < 0) return one / (this as Ring).power(arg, -power) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt index 0eed7132e..56ec84f0b 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt @@ -3,22 +3,21 @@ package scientifik.kmath.operations import scientifik.kmath.operations.BigInt.Companion.BASE import scientifik.kmath.operations.BigInt.Companion.BASE_SIZE import scientifik.kmath.structures.* -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.log2 import kotlin.math.max import kotlin.math.min import kotlin.math.sign -typealias Magnitude = UIntArray -typealias TBase = ULong +public typealias Magnitude = UIntArray +public typealias TBase = ULong /** * Kotlin Multiplatform implementation of Big Integer numbers (KBigInteger). * * @author Robert Drynkin (https://github.com/robdrynkin) and Peter Klimai (https://github.com/pklimai) */ -object BigIntField : Field { +public object BigIntField : Field { override val zero: BigInt = BigInt.ZERO override val one: BigInt = BigInt.ONE @@ -29,113 +28,93 @@ object BigIntField : Field { override fun multiply(a: BigInt, b: BigInt): BigInt = a.times(b) - operator fun String.unaryPlus(): BigInt = this.parseBigInteger() ?: error("Can't parse $this as big integer") + public operator fun String.unaryPlus(): BigInt = this.parseBigInteger() ?: error("Can't parse $this as big integer") - operator fun String.unaryMinus(): BigInt = + public operator fun String.unaryMinus(): BigInt = -(this.parseBigInteger() ?: error("Can't parse $this as big integer")) override fun divide(a: BigInt, b: BigInt): BigInt = a.div(b) } -class BigInt internal constructor( +public class BigInt internal constructor( private val sign: Byte, private val magnitude: Magnitude ) : Comparable { - override fun compareTo(other: BigInt): Int { - return when { - (this.sign == 0.toByte()) and (other.sign == 0.toByte()) -> 0 - this.sign < other.sign -> -1 - this.sign > other.sign -> 1 - else -> this.sign * compareMagnitudes(this.magnitude, other.magnitude) + override fun compareTo(other: BigInt): Int = when { + (this.sign == 0.toByte()) and (other.sign == 0.toByte()) -> 0 + this.sign < other.sign -> -1 + this.sign > other.sign -> 1 + else -> this.sign * compareMagnitudes(this.magnitude, other.magnitude) + } + + override fun equals(other: Any?): Boolean = + if (other is BigInt) compareTo(other) == 0 else error("Can't compare KBigInteger to a different type") + + override fun hashCode(): Int = magnitude.hashCode() + sign + + public fun abs(): BigInt = if (sign == 0.toByte()) this else BigInt(1, magnitude) + + public operator fun unaryMinus(): BigInt = + if (this.sign == 0.toByte()) this else BigInt((-this.sign).toByte(), this.magnitude) + + public operator fun plus(b: BigInt): BigInt = when { + b.sign == 0.toByte() -> this + sign == 0.toByte() -> b + this == -b -> ZERO + sign == b.sign -> BigInt(sign, addMagnitudes(magnitude, b.magnitude)) + + else -> { + val comp = compareMagnitudes(magnitude, b.magnitude) + + if (comp == 1) + BigInt(sign, subtractMagnitudes(magnitude, b.magnitude)) + else + BigInt((-sign).toByte(), subtractMagnitudes(b.magnitude, magnitude)) } } - override fun equals(other: Any?): Boolean { - if (other is BigInt) { - return this.compareTo(other) == 0 - } else error("Can't compare KBigInteger to a different type") - } + public operator fun minus(b: BigInt): BigInt = this + (-b) - override fun hashCode(): Int { - return magnitude.hashCode() + this.sign - } - - fun abs(): BigInt = if (sign == 0.toByte()) this else BigInt(1, magnitude) - - operator fun unaryMinus(): BigInt { - return if (this.sign == 0.toByte()) this else BigInt((-this.sign).toByte(), this.magnitude) - } - - operator fun plus(b: BigInt): BigInt { - return when { - b.sign == 0.toByte() -> this - this.sign == 0.toByte() -> b - this == -b -> ZERO - this.sign == b.sign -> BigInt(this.sign, addMagnitudes(this.magnitude, b.magnitude)) - else -> { - val comp: Int = compareMagnitudes(this.magnitude, b.magnitude) - - if (comp == 1) { - BigInt(this.sign, subtractMagnitudes(this.magnitude, b.magnitude)) - } else { - BigInt((-this.sign).toByte(), subtractMagnitudes(b.magnitude, this.magnitude)) - } - } - } - } - - operator fun minus(b: BigInt): BigInt { - return this + (-b) - } - - operator fun times(b: BigInt): BigInt { - return when { - this.sign == 0.toByte() -> ZERO - b.sign == 0.toByte() -> ZERO + public operator fun times(b: BigInt): BigInt = when { + this.sign == 0.toByte() -> ZERO + b.sign == 0.toByte() -> ZERO // TODO: Karatsuba - else -> BigInt((this.sign * b.sign).toByte(), multiplyMagnitudes(this.magnitude, b.magnitude)) - } + else -> BigInt((this.sign * b.sign).toByte(), multiplyMagnitudes(this.magnitude, b.magnitude)) } - operator fun times(other: UInt): BigInt { - return when { - this.sign == 0.toByte() -> ZERO - other == 0U -> ZERO - else -> BigInt(this.sign, multiplyMagnitudeByUInt(this.magnitude, other)) - } + public operator fun times(other: UInt): BigInt = when { + sign == 0.toByte() -> ZERO + other == 0U -> ZERO + else -> BigInt(sign, multiplyMagnitudeByUInt(magnitude, other)) } - operator fun times(other: Int): BigInt { - return if (other > 0) - this * kotlin.math.abs(other).toUInt() - else - -this * kotlin.math.abs(other).toUInt() - } + public operator fun times(other: Int): BigInt = if (other > 0) + this * kotlin.math.abs(other).toUInt() + else + -this * kotlin.math.abs(other).toUInt() - operator fun div(other: UInt): BigInt { - return BigInt(this.sign, divideMagnitudeByUInt(this.magnitude, other)) - } + public operator fun div(other: UInt): BigInt = BigInt(this.sign, divideMagnitudeByUInt(this.magnitude, other)) - operator fun div(other: Int): BigInt { - return BigInt( - (this.sign * other.sign).toByte(), - divideMagnitudeByUInt(this.magnitude, kotlin.math.abs(other).toUInt()) - ) - } + public operator fun div(other: Int): BigInt = BigInt( + (this.sign * other.sign).toByte(), + divideMagnitudeByUInt(this.magnitude, kotlin.math.abs(other).toUInt()) + ) private fun division(other: BigInt): Pair { // Long division algorithm: // https://en.wikipedia.org/wiki/Division_algorithm#Integer_division_(unsigned)_with_remainder // TODO: Implement more effective algorithm - var q: BigInt = ZERO - var r: BigInt = ZERO + var q = ZERO + var r = ZERO val bitSize = (BASE_SIZE * (this.magnitude.size - 1) + log2(this.magnitude.lastOrNull()?.toFloat() ?: 0f + 1)).toInt() + for (i in bitSize downTo 0) { r = r shl 1 r = r or ((abs(this) shr i) and ONE) + if (r >= abs(other)) { r -= abs(other) q += (ONE shl i) @@ -145,99 +124,84 @@ class BigInt internal constructor( return Pair(BigInt((this.sign * other.sign).toByte(), q.magnitude), r) } - operator fun div(other: BigInt): BigInt { - return this.division(other).first - } + public operator fun div(other: BigInt): BigInt = this.division(other).first - infix fun shl(i: Int): BigInt { + public infix fun shl(i: Int): BigInt { if (this == ZERO) return ZERO if (i == 0) return this - val fullShifts = i / BASE_SIZE + 1 val relShift = i % BASE_SIZE val shiftLeft = { x: UInt -> if (relShift >= 32) 0U else x shl relShift } val shiftRight = { x: UInt -> if (BASE_SIZE - relShift >= 32) 0U else x shr (BASE_SIZE - relShift) } - - val newMagnitude: Magnitude = Magnitude(this.magnitude.size + fullShifts) + val newMagnitude = Magnitude(this.magnitude.size + fullShifts) for (j in this.magnitude.indices) { newMagnitude[j + fullShifts - 1] = shiftLeft(this.magnitude[j]) - if (j != 0) { + + if (j != 0) newMagnitude[j + fullShifts - 1] = newMagnitude[j + fullShifts - 1] or shiftRight(this.magnitude[j - 1]) - } } newMagnitude[this.magnitude.size + fullShifts - 1] = shiftRight(this.magnitude.last()) - return BigInt(this.sign, stripLeadingZeros(newMagnitude)) } - infix fun shr(i: Int): BigInt { + public infix fun shr(i: Int): BigInt { if (this == ZERO) return ZERO if (i == 0) return this - val fullShifts = i / BASE_SIZE val relShift = i % BASE_SIZE val shiftRight = { x: UInt -> if (relShift >= 32) 0U else x shr relShift } val shiftLeft = { x: UInt -> if (BASE_SIZE - relShift >= 32) 0U else x shl (BASE_SIZE - relShift) } - if (this.magnitude.size - fullShifts <= 0) { - return ZERO - } + if (this.magnitude.size - fullShifts <= 0) return ZERO val newMagnitude: Magnitude = Magnitude(this.magnitude.size - fullShifts) for (j in fullShifts until this.magnitude.size) { newMagnitude[j - fullShifts] = shiftRight(this.magnitude[j]) - if (j != this.magnitude.size - 1) { + + if (j != this.magnitude.size - 1) newMagnitude[j - fullShifts] = newMagnitude[j - fullShifts] or shiftLeft(this.magnitude[j + 1]) - } } return BigInt(this.sign, stripLeadingZeros(newMagnitude)) } - infix fun or(other: BigInt): BigInt { + public infix fun or(other: BigInt): BigInt { if (this == ZERO) return other if (other == ZERO) return this val resSize = max(this.magnitude.size, other.magnitude.size) val newMagnitude: Magnitude = Magnitude(resSize) + for (i in 0 until resSize) { - if (i < this.magnitude.size) { - newMagnitude[i] = newMagnitude[i] or this.magnitude[i] - } - if (i < other.magnitude.size) { - newMagnitude[i] = newMagnitude[i] or other.magnitude[i] - } + if (i < this.magnitude.size) newMagnitude[i] = newMagnitude[i] or this.magnitude[i] + if (i < other.magnitude.size) newMagnitude[i] = newMagnitude[i] or other.magnitude[i] } + return BigInt(1, stripLeadingZeros(newMagnitude)) } - infix fun and(other: BigInt): BigInt { + public infix fun and(other: BigInt): BigInt { if ((this == ZERO) or (other == ZERO)) return ZERO val resSize = min(this.magnitude.size, other.magnitude.size) val newMagnitude: Magnitude = Magnitude(resSize) - for (i in 0 until resSize) { - newMagnitude[i] = this.magnitude[i] and other.magnitude[i] - } + for (i in 0 until resSize) newMagnitude[i] = this.magnitude[i] and other.magnitude[i] return BigInt(1, stripLeadingZeros(newMagnitude)) } - operator fun rem(other: Int): Int { + public operator fun rem(other: Int): Int { val res = this - (this / other) * other return if (res == ZERO) 0 else res.sign * res.magnitude[0].toInt() } - operator fun rem(other: BigInt): BigInt { - return this - (this / other) * other - } + public operator fun rem(other: BigInt): BigInt = this - (this / other) * other - fun modPow(exponent: BigInt, m: BigInt): BigInt { - return when { - exponent == ZERO -> ONE - exponent % 2 == 1 -> (this * modPow(exponent - ONE, m)) % m - else -> { - val sqRoot = modPow(exponent / 2, m) - (sqRoot * sqRoot) % m - } + public fun modPow(exponent: BigInt, m: BigInt): BigInt = when { + exponent == ZERO -> ONE + exponent % 2 == 1 -> (this * modPow(exponent - ONE, m)) % m + + else -> { + val sqRoot = modPow(exponent / 2, m) + (sqRoot * sqRoot) % m } } @@ -261,11 +225,11 @@ class BigInt internal constructor( return res } - companion object { - const val BASE: ULong = 0xffffffffUL - const val BASE_SIZE: Int = 32 - val ZERO: BigInt = BigInt(0, uintArrayOf()) - val ONE: BigInt = BigInt(1, uintArrayOf(1u)) + public companion object { + public const val BASE: ULong = 0xffffffffUL + public const val BASE_SIZE: Int = 32 + public val ZERO: BigInt = BigInt(0, uintArrayOf()) + public val ONE: BigInt = BigInt(1, uintArrayOf(1u)) private val hexMapping: HashMap = hashMapOf( 0U to "0", 1U to "1", 2U to "2", 3U to "3", @@ -349,11 +313,13 @@ class BigInt internal constructor( for (i in mag1.indices) { var carry: ULong = 0UL + for (j in mag2.indices) { val cur: ULong = result[i + j].toULong() + mag1[i].toULong() * mag2[j].toULong() + carry result[i + j] = (cur and BASE.toULong()).toUInt() carry = cur shr BASE_SIZE } + result[i + mag2.size] = (carry and BASE).toUInt() } @@ -361,15 +327,16 @@ class BigInt internal constructor( } private fun divideMagnitudeByUInt(mag: Magnitude, x: UInt): Magnitude { - val resultLength: Int = mag.size + val resultLength = mag.size val result = Magnitude(resultLength) - var carry: ULong = 0UL + var carry = 0uL for (i in mag.size - 1 downTo 0) { val cur: ULong = mag[i].toULong() + (carry shl BASE_SIZE) result[i] = (cur / x).toUInt() carry = cur % x } + return stripLeadingZeros(result) } @@ -377,31 +344,29 @@ class BigInt internal constructor( } - private fun stripLeadingZeros(mag: Magnitude): Magnitude { - if (mag.isEmpty() || mag.last() != 0U) { - return mag - } - var resSize: Int = mag.size - 1 + if (mag.isEmpty() || mag.last() != 0U) return mag + var resSize = mag.size - 1 + while (mag[resSize] == 0U) { - if (resSize == 0) - break + if (resSize == 0) break resSize -= 1 } + return mag.sliceArray(IntRange(0, resSize)) } -fun abs(x: BigInt): BigInt = x.abs() +public fun abs(x: BigInt): BigInt = x.abs() /** * Convert this [Int] to [BigInt] */ -fun Int.toBigInt(): BigInt = BigInt(sign.toByte(), uintArrayOf(kotlin.math.abs(this).toUInt())) +public fun Int.toBigInt(): BigInt = BigInt(sign.toByte(), uintArrayOf(kotlin.math.abs(this).toUInt())) /** * Convert this [Long] to [BigInt] */ -fun Long.toBigInt(): BigInt = BigInt( +public fun Long.toBigInt(): BigInt = BigInt( sign.toByte(), stripLeadingZeros( uintArrayOf( (kotlin.math.abs(this).toULong() and BASE).toUInt(), @@ -413,13 +378,14 @@ fun Long.toBigInt(): BigInt = BigInt( /** * Convert UInt to [BigInt] */ -fun UInt.toBigInt(): BigInt = BigInt(1, uintArrayOf(this)) +public fun UInt.toBigInt(): BigInt = BigInt(1, uintArrayOf(this)) /** * Convert ULong to [BigInt] */ -fun ULong.toBigInt(): BigInt = BigInt( +public fun ULong.toBigInt(): BigInt = BigInt( 1, + stripLeadingZeros( uintArrayOf( (this and BASE).toUInt(), @@ -431,12 +397,12 @@ fun ULong.toBigInt(): BigInt = BigInt( /** * Create a [BigInt] with this array of magnitudes with protective copy */ -fun UIntArray.toBigInt(sign: Byte): BigInt { +public fun UIntArray.toBigInt(sign: Byte): BigInt { require(sign != 0.toByte() || !isNotEmpty()) return BigInt(sign, copyOf()) } -val hexChToInt: MutableMap = hashMapOf( +private val hexChToInt: MutableMap = hashMapOf( '0' to 0, '1' to 1, '2' to 2, '3' to 3, '4' to 4, '5' to 5, '6' to 6, '7' to 7, '8' to 8, '9' to 9, 'A' to 10, 'B' to 11, @@ -446,9 +412,10 @@ val hexChToInt: MutableMap = hashMapOf( /** * Returns null if a valid number can not be read from a string */ -fun String.parseBigInteger(): BigInt? { +public fun String.parseBigInteger(): BigInt? { val sign: Int val sPositive: String + when { this[0] == '+' -> { sign = +1 @@ -463,43 +430,46 @@ fun String.parseBigInteger(): BigInt? { sign = +1 } } + var res = BigInt.ZERO var digitValue = BigInt.ONE val sPositiveUpper = sPositive.toUpperCase() + if (sPositiveUpper.startsWith("0X")) { // hex representation val sHex = sPositiveUpper.substring(2) + for (ch in sHex.reversed()) { if (ch == '_') continue res += digitValue * (hexChToInt[ch] ?: return null) digitValue *= 16.toBigInt() } - } else { // decimal representation - for (ch in sPositiveUpper.reversed()) { - if (ch == '_') continue - if (ch !in '0'..'9') { - return null - } - res += digitValue * (ch.toInt() - '0'.toInt()) - digitValue *= 10.toBigInt() + } else for (ch in sPositiveUpper.reversed()) { + // decimal representation + if (ch == '_') continue + if (ch !in '0'..'9') { + return null } + res += digitValue * (ch.toInt() - '0'.toInt()) + digitValue *= 10.toBigInt() } + return res * sign } -inline fun Buffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): Buffer { +public inline fun Buffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): Buffer { contract { callsInPlace(initializer) } return boxing(size, initializer) } -inline fun MutableBuffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): MutableBuffer { +public inline fun MutableBuffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): MutableBuffer { contract { callsInPlace(initializer) } return boxing(size, initializer) } -fun NDAlgebra.Companion.bigInt(vararg shape: Int): BoxingNDRing = +public fun NDAlgebra.Companion.bigInt(vararg shape: Int): BoxingNDRing = BoxingNDRing(shape, BigIntField, Buffer.Companion::bigInt) -fun NDElement.Companion.bigInt( +public fun NDElement.Companion.bigInt( vararg shape: Int, initializer: BigIntField.(IntArray) -> BigInt ): BufferedNDRingElement = NDAlgebra.bigInt(*shape).produce(initializer) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt index dcfd97d1a..facc2ad26 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt @@ -6,20 +6,19 @@ import scientifik.kmath.structures.MutableBuffer import scientifik.memory.MemoryReader import scientifik.memory.MemorySpec import scientifik.memory.MemoryWriter -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.* /** * This complex's conjugate. */ -val Complex.conjugate: Complex +public val Complex.conjugate: Complex get() = Complex(re, -im) /** * This complex's reciprocal. */ -val Complex.reciprocal: Complex +public val Complex.reciprocal: Complex get() { val scale = re * re + im * im return Complex(re / scale, -im / scale) @@ -28,13 +27,13 @@ val Complex.reciprocal: Complex /** * Absolute value of complex number. */ -val Complex.r: Double +public val Complex.r: Double get() = sqrt(re * re + im * im) /** * An angle between vector represented by complex number and X axis. */ -val Complex.theta: Double +public val Complex.theta: Double get() = atan(im / re) private val PI_DIV_2 = Complex(PI / 2, 0) @@ -42,14 +41,14 @@ private val PI_DIV_2 = Complex(PI / 2, 0) /** * A field of [Complex]. */ -object ComplexField : ExtendedField, Norm { +public object ComplexField : ExtendedField, Norm { override val zero: Complex = 0.0.toComplex() override val one: Complex = 1.0.toComplex() /** * The imaginary unit. */ - val i: Complex = Complex(0.0, 1.0) + public val i: Complex = Complex(0.0, 1.0) override fun add(a: Complex, b: Complex): Complex = Complex(a.re + b.re, a.im + b.im) @@ -117,7 +116,7 @@ object ComplexField : ExtendedField, Norm { * @param c the augend. * @return the sum. */ - operator fun Double.plus(c: Complex): Complex = add(this.toComplex(), c) + public operator fun Double.plus(c: Complex): Complex = add(this.toComplex(), c) /** * Subtracts complex number from real one. @@ -126,7 +125,7 @@ object ComplexField : ExtendedField, Norm { * @param c the subtrahend. * @return the difference. */ - operator fun Double.minus(c: Complex): Complex = add(this.toComplex(), -c) + public operator fun Double.minus(c: Complex): Complex = add(this.toComplex(), -c) /** * Adds real number to complex one. @@ -135,7 +134,7 @@ object ComplexField : ExtendedField, Norm { * @param d the augend. * @return the sum. */ - operator fun Complex.plus(d: Double): Complex = d + this + public operator fun Complex.plus(d: Double): Complex = d + this /** * Subtracts real number from complex one. @@ -144,7 +143,7 @@ object ComplexField : ExtendedField, Norm { * @param d the subtrahend. * @return the difference. */ - operator fun Complex.minus(d: Double): Complex = add(this, -d.toComplex()) + public operator fun Complex.minus(d: Double): Complex = add(this, -d.toComplex()) /** * Multiplies real number by complex one. @@ -153,7 +152,7 @@ object ComplexField : ExtendedField, Norm { * @param c the multiplicand. * @receiver the product. */ - operator fun Double.times(c: Complex): Complex = Complex(c.re * this, c.im * this) + public operator fun Double.times(c: Complex): Complex = Complex(c.re * this, c.im * this) override fun norm(arg: Complex): Complex = sqrt(arg.conjugate * arg) @@ -166,8 +165,8 @@ object ComplexField : ExtendedField, Norm { * @property re The real part. * @property im The imaginary part. */ -data class Complex(val re: Double, val im: Double) : FieldElement, Comparable { - constructor(re: Number, im: Number) : this(re.toDouble(), im.toDouble()) +public data class Complex(val re: Double, val im: Double) : FieldElement, Comparable { + public constructor(re: Number, im: Number) : this(re.toDouble(), im.toDouble()) override val context: ComplexField get() = ComplexField @@ -177,7 +176,7 @@ data class Complex(val re: Double, val im: Double) : FieldElement { + public companion object : MemorySpec { override val objectSize: Int = 16 override fun MemoryReader.read(offset: Int): Complex = @@ -196,14 +195,14 @@ data class Complex(val re: Double, val im: Double) : FieldElement Complex): Buffer { +public inline fun Buffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer { contract { callsInPlace(init) } return MemoryBuffer.create(Complex, size, init) } -inline fun MutableBuffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer { +public inline fun MutableBuffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer { contract { callsInPlace(init) } return MemoryBuffer.create(Complex, size, init) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt index 0735a96da..54460a0da 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt @@ -7,7 +7,7 @@ import kotlin.math.pow as kpow /** * Advanced Number-like semifield that implements basic operations. */ -interface ExtendedFieldOperations : +public interface ExtendedFieldOperations : FieldOperations, TrigonometricOperations, HyperbolicOperations, @@ -41,7 +41,7 @@ interface ExtendedFieldOperations : /** * Advanced Number-like field that implements basic operations. */ -interface ExtendedField : ExtendedFieldOperations, Field { +public interface ExtendedField : ExtendedFieldOperations, Field { override fun sinh(arg: T): T = (exp(arg) - exp(-arg)) / 2 override fun cosh(arg: T): T = (exp(arg) + exp(-arg)) / 2 override fun tanh(arg: T): T = (exp(arg) - exp(-arg)) / (exp(-arg) + exp(arg)) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt index 1dac649aa..101f62293 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt @@ -5,230 +5,230 @@ package scientifik.kmath.operations * * @param T the type of element of this structure. */ -interface TrigonometricOperations : Algebra { +public interface TrigonometricOperations : Algebra { /** * Computes the sine of [arg]. */ - fun sin(arg: T): T + public fun sin(arg: T): T /** * Computes the cosine of [arg]. */ - fun cos(arg: T): T + public fun cos(arg: T): T /** * Computes the tangent of [arg]. */ - fun tan(arg: T): T + public fun tan(arg: T): T /** * Computes the inverse sine of [arg]. */ - fun asin(arg: T): T + public fun asin(arg: T): T /** * Computes the inverse cosine of [arg]. */ - fun acos(arg: T): T + public fun acos(arg: T): T /** * Computes the inverse tangent of [arg]. */ - fun atan(arg: T): T + public fun atan(arg: T): T - companion object { + public companion object { /** * The identifier of sine. */ - const val SIN_OPERATION: String = "sin" + public const val SIN_OPERATION: String = "sin" /** * The identifier of cosine. */ - const val COS_OPERATION: String = "cos" + public const val COS_OPERATION: String = "cos" /** * The identifier of tangent. */ - const val TAN_OPERATION: String = "tan" + public const val TAN_OPERATION: String = "tan" /** * The identifier of inverse sine. */ - const val ASIN_OPERATION: String = "asin" + public const val ASIN_OPERATION: String = "asin" /** * The identifier of inverse cosine. */ - const val ACOS_OPERATION: String = "acos" + public const val ACOS_OPERATION: String = "acos" /** * The identifier of inverse tangent. */ - const val ATAN_OPERATION: String = "atan" + public const val ATAN_OPERATION: String = "atan" } } /** * Computes the sine of [arg]. */ -fun >> sin(arg: T): T = arg.context.sin(arg) +public fun >> sin(arg: T): T = arg.context.sin(arg) /** * Computes the cosine of [arg]. */ -fun >> cos(arg: T): T = arg.context.cos(arg) +public fun >> cos(arg: T): T = arg.context.cos(arg) /** * Computes the tangent of [arg]. */ -fun >> tan(arg: T): T = arg.context.tan(arg) +public fun >> tan(arg: T): T = arg.context.tan(arg) /** * Computes the inverse sine of [arg]. */ -fun >> asin(arg: T): T = arg.context.asin(arg) +public fun >> asin(arg: T): T = arg.context.asin(arg) /** * Computes the inverse cosine of [arg]. */ -fun >> acos(arg: T): T = arg.context.acos(arg) +public fun >> acos(arg: T): T = arg.context.acos(arg) /** * Computes the inverse tangent of [arg]. */ -fun >> atan(arg: T): T = arg.context.atan(arg) +public fun >> atan(arg: T): T = arg.context.atan(arg) /** * A container for hyperbolic trigonometric operations for specific type. * * @param T the type of element of this structure. */ -interface HyperbolicOperations : Algebra { +public interface HyperbolicOperations : Algebra { /** * Computes the hyperbolic sine of [arg]. */ - fun sinh(arg: T): T + public fun sinh(arg: T): T /** * Computes the hyperbolic cosine of [arg]. */ - fun cosh(arg: T): T + public fun cosh(arg: T): T /** * Computes the hyperbolic tangent of [arg]. */ - fun tanh(arg: T): T + public fun tanh(arg: T): T /** * Computes the inverse hyperbolic sine of [arg]. */ - fun asinh(arg: T): T + public fun asinh(arg: T): T /** * Computes the inverse hyperbolic cosine of [arg]. */ - fun acosh(arg: T): T + public fun acosh(arg: T): T /** * Computes the inverse hyperbolic tangent of [arg]. */ - fun atanh(arg: T): T + public fun atanh(arg: T): T - companion object { + public companion object { /** * The identifier of hyperbolic sine. */ - const val SINH_OPERATION: String = "sinh" + public const val SINH_OPERATION: String = "sinh" /** * The identifier of hyperbolic cosine. */ - const val COSH_OPERATION: String = "cosh" + public const val COSH_OPERATION: String = "cosh" /** * The identifier of hyperbolic tangent. */ - const val TANH_OPERATION: String = "tanh" + public const val TANH_OPERATION: String = "tanh" /** * The identifier of inverse hyperbolic sine. */ - const val ASINH_OPERATION: String = "asinh" + public const val ASINH_OPERATION: String = "asinh" /** * The identifier of inverse hyperbolic cosine. */ - const val ACOSH_OPERATION: String = "acosh" + public const val ACOSH_OPERATION: String = "acosh" /** * The identifier of inverse hyperbolic tangent. */ - const val ATANH_OPERATION: String = "atanh" + public const val ATANH_OPERATION: String = "atanh" } } /** * Computes the hyperbolic sine of [arg]. */ -fun >> sinh(arg: T): T = arg.context.sinh(arg) +public fun >> sinh(arg: T): T = arg.context.sinh(arg) /** * Computes the hyperbolic cosine of [arg]. */ -fun >> cosh(arg: T): T = arg.context.cosh(arg) +public fun >> cosh(arg: T): T = arg.context.cosh(arg) /** * Computes the hyperbolic tangent of [arg]. */ -fun >> tanh(arg: T): T = arg.context.tanh(arg) +public fun >> tanh(arg: T): T = arg.context.tanh(arg) /** * Computes the inverse hyperbolic sine of [arg]. */ -fun >> asinh(arg: T): T = arg.context.asinh(arg) +public fun >> asinh(arg: T): T = arg.context.asinh(arg) /** * Computes the inverse hyperbolic cosine of [arg]. */ -fun >> acosh(arg: T): T = arg.context.acosh(arg) +public fun >> acosh(arg: T): T = arg.context.acosh(arg) /** * Computes the inverse hyperbolic tangent of [arg]. */ -fun >> atanh(arg: T): T = arg.context.atanh(arg) +public fun >> atanh(arg: T): T = arg.context.atanh(arg) /** * A context extension to include power operations based on exponentiation. * * @param T the type of element of this structure. */ -interface PowerOperations : Algebra { +public interface PowerOperations : Algebra { /** * Raises [arg] to the power [pow]. */ - fun power(arg: T, pow: Number): T + public fun power(arg: T, pow: Number): T /** * Computes the square root of the value [arg]. */ - fun sqrt(arg: T): T = power(arg, 0.5) + public fun sqrt(arg: T): T = power(arg, 0.5) /** * Raises this value to the power [pow]. */ - infix fun T.pow(pow: Number): T = power(this, pow) + public infix fun T.pow(pow: Number): T = power(this, pow) - companion object { + public companion object { /** * The identifier of exponentiation. */ - const val POW_OPERATION: String = "pow" + public const val POW_OPERATION: String = "pow" /** * The identifier of square root. */ - const val SQRT_OPERATION: String = "sqrt" + public const val SQRT_OPERATION: String = "sqrt" } } @@ -239,56 +239,56 @@ interface PowerOperations : Algebra { * @param power the exponent. * @return the base raised to the power. */ -infix fun >> T.pow(power: Double): T = context.power(this, power) +public infix fun >> T.pow(power: Double): T = context.power(this, power) /** * Computes the square root of the value [arg]. */ -fun >> sqrt(arg: T): T = arg pow 0.5 +public fun >> sqrt(arg: T): T = arg pow 0.5 /** * Computes the square of the value [arg]. */ -fun >> sqr(arg: T): T = arg pow 2.0 +public fun >> sqr(arg: T): T = arg pow 2.0 /** * A container for operations related to `exp` and `ln` functions. * * @param T the type of element of this structure. */ -interface ExponentialOperations : Algebra { +public interface ExponentialOperations : Algebra { /** * Computes Euler's number `e` raised to the power of the value [arg]. */ - fun exp(arg: T): T + public fun exp(arg: T): T /** * Computes the natural logarithm (base `e`) of the value [arg]. */ - fun ln(arg: T): T + public fun ln(arg: T): T - companion object { + public companion object { /** * The identifier of exponential function. */ - const val EXP_OPERATION: String = "exp" + public const val EXP_OPERATION: String = "exp" /** * The identifier of natural logarithm. */ - const val LN_OPERATION: String = "ln" + public const val LN_OPERATION: String = "ln" } } /** * The identifier of exponential function. */ -fun >> exp(arg: T): T = arg.context.exp(arg) +public fun >> exp(arg: T): T = arg.context.exp(arg) /** * The identifier of natural logarithm. */ -fun >> ln(arg: T): T = arg.context.ln(arg) +public fun >> ln(arg: T): T = arg.context.ln(arg) /** * A container for norm functional on element. @@ -296,14 +296,14 @@ fun >> ln(arg: T): T = arg.context. * @param T the type of element having norm defined. * @param R the type of norm. */ -interface Norm { +public interface Norm { /** * Computes the norm of [arg] (i.e. absolute value or vector length). */ - fun norm(arg: T): R + public fun norm(arg: T): R } /** * Computes the norm of [arg] (i.e. absolute value or vector length). */ -fun >, R> norm(arg: T): R = arg.context.norm(arg) +public fun >, R> norm(arg: T): R = arg.context.norm(arg) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt index be71645d1..5950532e1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt @@ -3,16 +3,16 @@ package scientifik.kmath.structures import scientifik.kmath.operations.Field import scientifik.kmath.operations.FieldElement -class BoxingNDField>( +public class BoxingNDField>( override val shape: IntArray, override val elementContext: F, - val bufferFactory: BufferFactory + public val bufferFactory: BufferFactory ) : BufferedNDField { override val zero: BufferedNDFieldElement by lazy { produce { zero } } override val one: BufferedNDFieldElement by lazy { produce { one } } override val strides: Strides = DefaultStrides(shape) - fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer = + public fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer = bufferFactory(size, initializer) override fun check(vararg elements: NDBuffer) { @@ -70,7 +70,7 @@ class BoxingNDField>( BufferedNDFieldElement(this@BoxingNDField, buffer) } -inline fun , R> F.nd( +public inline fun , R> F.nd( noinline bufferFactory: BufferFactory, vararg shape: Int, action: NDField.() -> R diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt index 91b945e79..9e44e38aa 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt @@ -3,16 +3,16 @@ package scientifik.kmath.structures import scientifik.kmath.operations.Ring import scientifik.kmath.operations.RingElement -class BoxingNDRing>( +public class BoxingNDRing>( override val shape: IntArray, override val elementContext: R, - val bufferFactory: BufferFactory + public val bufferFactory: BufferFactory ) : BufferedNDRing { override val strides: Strides = DefaultStrides(shape) override val zero: BufferedNDRingElement by lazy { produce { zero } } override val one: BufferedNDRingElement by lazy { produce { one } } - fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer = bufferFactory(size, initializer) + public fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer = bufferFactory(size, initializer) override fun check(vararg elements: NDBuffer) { require(elements.all { it.strides == strides }) { "Element strides are not the same as context strides" } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt index 2c3d69094..0a02fdc8f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt @@ -5,24 +5,23 @@ import kotlin.reflect.KClass /** * A context that allows to operate on a [MutableBuffer] as on 2d array */ -class BufferAccessor2D(val type: KClass, val rowNum: Int, val colNum: Int) { - operator fun Buffer.get(i: Int, j: Int): T = get(i + colNum * j) +public class BufferAccessor2D(public val type: KClass, public val rowNum: Int, public val colNum: Int) { + public operator fun Buffer.get(i: Int, j: Int): T = get(i + colNum * j) - operator fun MutableBuffer.set(i: Int, j: Int, value: T) { + public operator fun MutableBuffer.set(i: Int, j: Int, value: T) { set(i + colNum * j, value) } - inline fun create(init: (i: Int, j: Int) -> T): MutableBuffer = + public inline fun create(init: (i: Int, j: Int) -> T): MutableBuffer = MutableBuffer.auto(type, rowNum * colNum) { offset -> init(offset / colNum, offset % colNum) } - fun create(mat: Structure2D): MutableBuffer = create { i, j -> mat[i, j] } + public fun create(mat: Structure2D): MutableBuffer = create { i, j -> mat[i, j] } //TODO optimize wrapper - fun MutableBuffer.collect(): Structure2D = + public fun MutableBuffer.collect(): Structure2D = NDStructure.auto(type, rowNum, colNum) { (i, j) -> get(i, j) }.as2D() - - inner class Row(val buffer: MutableBuffer, val rowIndex: Int) : MutableBuffer { + public inner class Row(public val buffer: MutableBuffer, public val rowIndex: Int) : MutableBuffer { override val size: Int get() = colNum override operator fun get(index: Int): T = buffer[rowIndex, index] @@ -39,5 +38,5 @@ class BufferAccessor2D(val type: KClass, val rowNum: Int, val colNum /** * Get row */ - fun MutableBuffer.row(i: Int): Row = Row(this, i) + public fun MutableBuffer.row(i: Int): Row = Row(this, i) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt index 2c0c2021f..ac8ca0db4 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt @@ -2,8 +2,8 @@ package scientifik.kmath.structures import scientifik.kmath.operations.* -interface BufferedNDAlgebra : NDAlgebra> { - val strides: Strides +public interface BufferedNDAlgebra : NDAlgebra> { + public val strides: Strides override fun check(vararg elements: NDBuffer): Unit = require(elements.all { it.strides == strides }) { ("Strides mismatch") } @@ -15,29 +15,27 @@ interface BufferedNDAlgebra : NDAlgebra> { * * If the argument is [NDBuffer] with different strides structure, the new element will be produced. */ - fun NDStructure.toBuffer(): NDBuffer { - return if (this is NDBuffer && this.strides == this@BufferedNDAlgebra.strides) { + public fun NDStructure.toBuffer(): NDBuffer = + if (this is NDBuffer && this.strides == this@BufferedNDAlgebra.strides) this - } else { - produce { index -> get(index) } - } - } + else + produce { index -> this@toBuffer[index] } /** * Convert a buffer to element of this algebra */ - fun NDBuffer.toElement(): MathElement> + public fun NDBuffer.toElement(): MathElement> } -interface BufferedNDSpace> : NDSpace>, BufferedNDAlgebra { +public interface BufferedNDSpace> : NDSpace>, BufferedNDAlgebra { override fun NDBuffer.toElement(): SpaceElement, *, out BufferedNDSpace> } -interface BufferedNDRing> : NDRing>, BufferedNDSpace { +public interface BufferedNDRing> : NDRing>, BufferedNDSpace { override fun NDBuffer.toElement(): RingElement, *, out BufferedNDRing> } -interface BufferedNDField> : NDField>, BufferedNDRing { +public interface BufferedNDField> : NDField>, BufferedNDRing { override fun NDBuffer.toElement(): FieldElement, *, out BufferedNDField> } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt index 20e34fadd..4de31d101 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt @@ -5,7 +5,7 @@ import scientifik.kmath.operations.* /** * Base class for an element with context, containing strides */ -abstract class BufferedNDElement : NDBuffer(), NDElement> { +public abstract class BufferedNDElement : NDBuffer(), NDElement> { abstract override val context: BufferedNDAlgebra override val strides: Strides get() = context.strides @@ -13,7 +13,7 @@ abstract class BufferedNDElement : NDBuffer(), NDElement>( +public class BufferedNDSpaceElement>( override val context: BufferedNDSpace, override val buffer: Buffer ) : BufferedNDElement(), SpaceElement, BufferedNDSpaceElement, BufferedNDSpace> { @@ -26,7 +26,7 @@ class BufferedNDSpaceElement>( } } -class BufferedNDRingElement>( +public class BufferedNDRingElement>( override val context: BufferedNDRing, override val buffer: Buffer ) : BufferedNDElement(), RingElement, BufferedNDRingElement, BufferedNDRing> { @@ -38,7 +38,7 @@ class BufferedNDRingElement>( } } -class BufferedNDFieldElement>( +public class BufferedNDFieldElement>( override val context: BufferedNDField, override val buffer: Buffer ) : BufferedNDElement(), FieldElement, BufferedNDFieldElement, BufferedNDField> { @@ -54,7 +54,7 @@ class BufferedNDFieldElement>( /** * Element by element application of any operation on elements to the whole array. Just like in numpy. */ -operator fun > Function1.invoke(ndElement: BufferedNDElement): MathElement> = +public operator fun > Function1.invoke(ndElement: BufferedNDElement): MathElement> = ndElement.context.run { map(ndElement) { invoke(it) }.toElement() } /* plus and minus */ @@ -62,13 +62,13 @@ operator fun > Function1.invoke(ndElement: BufferedN /** * Summation operation for [BufferedNDElement] and single element */ -operator fun > BufferedNDElement.plus(arg: T): NDElement> = +public operator fun > BufferedNDElement.plus(arg: T): NDElement> = context.map(this) { it + arg }.wrap() /** * Subtraction operation between [BufferedNDElement] and single element */ -operator fun > BufferedNDElement.minus(arg: T): NDElement> = +public operator fun > BufferedNDElement.minus(arg: T): NDElement> = context.map(this) { it - arg }.wrap() /* prod and div */ @@ -76,11 +76,11 @@ operator fun > BufferedNDElement.minus(arg: T): NDEl /** * Product operation for [BufferedNDElement] and single element */ -operator fun > BufferedNDElement.times(arg: T): NDElement> = +public operator fun > BufferedNDElement.times(arg: T): NDElement> = context.map(this) { it * arg }.wrap() /** * Division operation between [BufferedNDElement] and single element */ -operator fun > BufferedNDElement.div(arg: T): NDElement> = +public operator fun > BufferedNDElement.div(arg: T): NDElement> = context.map(this) { it / arg }.wrap() diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt index 4afaa63ab..48d15d50a 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt @@ -11,44 +11,44 @@ import kotlin.reflect.KClass * * @param T the type of buffer. */ -typealias BufferFactory = (Int, (Int) -> T) -> Buffer +public typealias BufferFactory = (Int, (Int) -> T) -> Buffer /** * Function that produces [MutableBuffer] from its size and function that supplies values. * * @param T the type of buffer. */ -typealias MutableBufferFactory = (Int, (Int) -> T) -> MutableBuffer +public typealias MutableBufferFactory = (Int, (Int) -> T) -> MutableBuffer /** * A generic immutable random-access structure for both primitives and objects. * * @param T the type of elements contained in the buffer. */ -interface Buffer { +public interface Buffer { /** * The size of this buffer. */ - val size: Int + public val size: Int /** * Gets element at given index. */ - operator fun get(index: Int): T + public operator fun get(index: Int): T /** * Iterates over all elements. */ - operator fun iterator(): Iterator + public operator fun iterator(): Iterator /** * Checks content equality with another buffer. */ - fun contentEquals(other: Buffer<*>): Boolean = + public fun contentEquals(other: Buffer<*>): Boolean = asSequence().mapIndexed { index, value -> value == other[index] }.all { it } - companion object { - inline fun real(size: Int, initializer: (Int) -> Double): RealBuffer { + public companion object { + public inline fun real(size: Int, initializer: (Int) -> Double): RealBuffer { val array = DoubleArray(size) { initializer(it) } return RealBuffer(array) } @@ -56,10 +56,10 @@ interface Buffer { /** * Create a boxing buffer of given type */ - inline fun boxing(size: Int, initializer: (Int) -> T): Buffer = ListBuffer(List(size, initializer)) + public inline fun boxing(size: Int, initializer: (Int) -> T): Buffer = ListBuffer(List(size, initializer)) @Suppress("UNCHECKED_CAST") - inline fun auto(type: KClass, size: Int, crossinline initializer: (Int) -> T): Buffer { + public inline fun auto(type: KClass, size: Int, crossinline initializer: (Int) -> T): Buffer { //TODO add resolution based on Annotation or companion resolution return when (type) { Double::class -> RealBuffer(DoubleArray(size) { initializer(it) as Double }) as Buffer @@ -75,7 +75,7 @@ interface Buffer { * Create most appropriate immutable buffer for given type avoiding boxing wherever possible */ @Suppress("UNCHECKED_CAST") - inline fun auto(size: Int, crossinline initializer: (Int) -> T): Buffer = + public inline fun auto(size: Int, crossinline initializer: (Int) -> T): Buffer = auto(T::class, size, initializer) } } @@ -83,35 +83,35 @@ interface Buffer { /** * Creates a sequence that returns all elements from this [Buffer]. */ -fun Buffer.asSequence(): Sequence = Sequence(::iterator) +public fun Buffer.asSequence(): Sequence = Sequence(::iterator) /** * Creates an iterable that returns all elements from this [Buffer]. */ -fun Buffer.asIterable(): Iterable = Iterable(::iterator) +public fun Buffer.asIterable(): Iterable = Iterable(::iterator) /** * Returns an [IntRange] of the valid indices for this [Buffer]. */ -val Buffer<*>.indices: IntRange get() = 0 until size +public val Buffer<*>.indices: IntRange get() = 0 until size /** * A generic mutable random-access structure for both primitives and objects. * * @param T the type of elements contained in the buffer. */ -interface MutableBuffer : Buffer { +public interface MutableBuffer : Buffer { /** * Sets the array element at the specified [index] to the specified [value]. */ - operator fun set(index: Int, value: T) + public operator fun set(index: Int, value: T) /** * Returns a shallow copy of the buffer. */ - fun copy(): MutableBuffer + public fun copy(): MutableBuffer - companion object { + public companion object { /** * Create a boxing mutable buffer of given type */ @@ -216,7 +216,7 @@ class ArrayBuffer(private val array: Array) : MutableBuffer { /** * Returns an [ArrayBuffer] that wraps the original array. */ -fun Array.asBuffer(): ArrayBuffer = ArrayBuffer(this) +public fun Array.asBuffer(): ArrayBuffer = ArrayBuffer(this) /** * Immutable wrapper for [MutableBuffer]. @@ -224,7 +224,7 @@ fun Array.asBuffer(): ArrayBuffer = ArrayBuffer(this) * @param T the type of elements contained in the buffer. * @property buffer The underlying buffer. */ -inline class ReadOnlyBuffer(val buffer: MutableBuffer) : Buffer { +public inline class ReadOnlyBuffer(public val buffer: MutableBuffer) : Buffer { override val size: Int get() = buffer.size override operator fun get(index: Int): T = buffer[index] @@ -238,7 +238,7 @@ inline class ReadOnlyBuffer(val buffer: MutableBuffer) : Buffer { * * @param T the type of elements provided by the buffer. */ -class VirtualBuffer(override val size: Int, private val generator: (Int) -> T) : Buffer { +public class VirtualBuffer(override val size: Int, private val generator: (Int) -> T) : Buffer { override operator fun get(index: Int): T { if (index < 0 || index >= size) throw IndexOutOfBoundsException("Expected index from 0 to ${size - 1}, but found $index") return generator(index) @@ -258,14 +258,14 @@ class VirtualBuffer(override val size: Int, private val generator: (Int) -> T /** * Convert this buffer to read-only buffer. */ -fun Buffer.asReadOnly(): Buffer = if (this is MutableBuffer) ReadOnlyBuffer(this) else this +public fun Buffer.asReadOnly(): Buffer = if (this is MutableBuffer) ReadOnlyBuffer(this) else this /** * Typealias for buffer transformations. */ -typealias BufferTransform = (Buffer) -> Buffer +public typealias BufferTransform = (Buffer) -> Buffer /** * Typealias for buffer transformations with suspend function. */ -typealias SuspendBufferTransform = suspend (Buffer) -> Buffer +public typealias SuspendBufferTransform = suspend (Buffer) -> Buffer diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt index 2c6e3a5c7..56fe2a5ac 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt @@ -8,12 +8,12 @@ import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract -typealias ComplexNDElement = BufferedNDFieldElement +public typealias ComplexNDElement = BufferedNDFieldElement /** * An optimized nd-field for complex numbers */ -class ComplexNDField(override val shape: IntArray) : +public class ComplexNDField(override val shape: IntArray) : BufferedNDField, ExtendedNDField> { @@ -22,7 +22,7 @@ class ComplexNDField(override val shape: IntArray) : override val zero: ComplexNDElement by lazy { produce { zero } } override val one: ComplexNDElement by lazy { produce { one } } - inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Complex): Buffer = + public inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Complex): Buffer = Buffer.complex(size) { initializer(it) } /** @@ -130,29 +130,25 @@ operator fun Function1.invoke(ndElement: ComplexNDElement): Co /** * Summation operation for [BufferedNDElement] and single element */ -operator fun ComplexNDElement.plus(arg: Complex): ComplexNDElement = map { it + arg } +public operator fun ComplexNDElement.plus(arg: Complex): ComplexNDElement = map { it + arg } /** * Subtraction operation between [BufferedNDElement] and single element */ -operator fun ComplexNDElement.minus(arg: Complex): ComplexNDElement = - map { it - arg } +public operator fun ComplexNDElement.minus(arg: Complex): ComplexNDElement = map { it - arg } -operator fun ComplexNDElement.plus(arg: Double): ComplexNDElement = - map { it + arg } +public operator fun ComplexNDElement.plus(arg: Double): ComplexNDElement = map { it + arg } +public operator fun ComplexNDElement.minus(arg: Double): ComplexNDElement = map { it - arg } -operator fun ComplexNDElement.minus(arg: Double): ComplexNDElement = - map { it - arg } +public fun NDField.Companion.complex(vararg shape: Int): ComplexNDField = ComplexNDField(shape) -fun NDField.Companion.complex(vararg shape: Int): ComplexNDField = ComplexNDField(shape) - -fun NDElement.Companion.complex(vararg shape: Int, initializer: ComplexField.(IntArray) -> Complex): ComplexNDElement = +public fun NDElement.Companion.complex(vararg shape: Int, initializer: ComplexField.(IntArray) -> Complex): ComplexNDElement = NDField.complex(*shape).produce(initializer) /** * Produce a context for n-dimensional operations inside this real field */ -inline fun ComplexField.nd(vararg shape: Int, action: ComplexNDField.() -> R): R { +public inline fun ComplexField.nd(vararg shape: Int, action: ComplexNDField.() -> R): R { contract { callsInPlace(action, InvocationKind.EXACTLY_ONCE) } return NDField.complex(*shape).action() } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt index 24aa48c6b..12731ff86 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt @@ -9,7 +9,7 @@ import scientifik.kmath.operations.ExtendedField * @param N the type of ND structure. * @param F the extended field of structure elements. */ -interface ExtendedNDField, N : NDStructure> : NDField, ExtendedField +public interface ExtendedNDField, N : NDStructure> : NDField, ExtendedField ///** // * NDField that supports [ExtendedField] operations on its elements diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt index 9c32aa31b..314f9fd63 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt @@ -9,7 +9,7 @@ import kotlin.experimental.and * * @property mask bit mask value of this flag. */ -enum class ValueFlag(val mask: Byte) { +public enum class ValueFlag(public val mask: Byte) { /** * Reports the value is NaN. */ diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt index 95651c547..88a3bd39d 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt @@ -9,7 +9,7 @@ import kotlin.contracts.contract * * @property array the underlying array. */ -inline class IntBuffer(val array: IntArray) : MutableBuffer { +public inline class IntBuffer(public val array: IntArray) : MutableBuffer { override val size: Int get() = array.size override operator fun get(index: Int): Int = array[index] diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt index a44109f8a..17f161d19 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt @@ -8,7 +8,7 @@ import kotlin.contracts.contract * * @property array the underlying array. */ -inline class LongBuffer(val array: LongArray) : MutableBuffer { +public inline class LongBuffer(public val array: LongArray) : MutableBuffer { override val size: Int get() = array.size override operator fun get(index: Int): Long = array[index] @@ -31,7 +31,7 @@ inline class LongBuffer(val array: LongArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun LongBuffer(size: Int, init: (Int) -> Long): LongBuffer { +public inline fun LongBuffer(size: Int, init: (Int) -> Long): LongBuffer { contract { callsInPlace(init) } return LongBuffer(LongArray(size) { init(it) }) } @@ -39,12 +39,12 @@ inline fun LongBuffer(size: Int, init: (Int) -> Long): LongBuffer { /** * Returns a new [LongBuffer] of given elements. */ -fun LongBuffer(vararg longs: Long): LongBuffer = LongBuffer(longs) +public fun LongBuffer(vararg longs: Long): LongBuffer = LongBuffer(longs) /** * Returns a [IntArray] containing all of the elements of this [MutableBuffer]. */ -val MutableBuffer.array: LongArray +public val MutableBuffer.array: LongArray get() = (if (this is LongBuffer) array else LongArray(size) { get(it) }) /** @@ -53,4 +53,4 @@ val MutableBuffer.array: LongArray * @receiver the array. * @return the new buffer. */ -fun LongArray.asBuffer(): LongBuffer = LongBuffer(this) +public fun LongArray.asBuffer(): LongBuffer = LongBuffer(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt index f09db3c72..a28eda9b9 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt @@ -5,12 +5,10 @@ import scientifik.kmath.operations.Field import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Space - /** * An exception is thrown when the expected ans actual shape of NDArray differs */ -class ShapeMismatchException(val expected: IntArray, val actual: IntArray) : RuntimeException() - +public class ShapeMismatchException(public val expected: IntArray, public val actual: IntArray) : RuntimeException() /** * The base interface for all nd-algebra implementations @@ -18,53 +16,49 @@ class ShapeMismatchException(val expected: IntArray, val actual: IntArray) : Run * @param C the type of the element context * @param N the type of the structure */ -interface NDAlgebra> { - val shape: IntArray - val elementContext: C +public interface NDAlgebra> { + public val shape: IntArray + public val elementContext: C /** * Produce a new [N] structure using given initializer function */ - fun produce(initializer: C.(IntArray) -> T): N + public fun produce(initializer: C.(IntArray) -> T): N /** * Map elements from one structure to another one */ - fun map(arg: N, transform: C.(T) -> T): N + public fun map(arg: N, transform: C.(T) -> T): N /** * Map indexed elements */ - fun mapIndexed(arg: N, transform: C.(index: IntArray, T) -> T): N + public fun mapIndexed(arg: N, transform: C.(index: IntArray, T) -> T): N /** * Combine two structures into one */ - fun combine(a: N, b: N, transform: C.(T, T) -> T): N + public fun combine(a: N, b: N, transform: C.(T, T) -> T): N /** * Check if given elements are consistent with this context */ - fun check(vararg elements: N) { - elements.forEach { - if (!shape.contentEquals(it.shape)) { - throw ShapeMismatchException(shape, it.shape) - } - } + public fun check(vararg elements: N): Unit = elements.forEach { + if (!shape.contentEquals(it.shape)) throw ShapeMismatchException(shape, it.shape) } /** * element-by-element invoke a function working on [T] on a [NDStructure] */ - operator fun Function1.invoke(structure: N): N = map(structure) { value -> this@invoke(value) } + public operator fun Function1.invoke(structure: N): N = map(structure) { value -> this@invoke(value) } - companion object + public companion object } /** * An nd-space over element space */ -interface NDSpace, N : NDStructure> : Space, NDAlgebra { +public interface NDSpace, N : NDStructure> : Space, NDAlgebra { /** * Element-by-element addition */ @@ -76,32 +70,31 @@ interface NDSpace, N : NDStructure> : Space, NDAlgebra add(arg, value) } + public operator fun N.plus(arg: T): N = map(this) { value -> add(arg, value) } - operator fun N.minus(arg: T): N = map(this) { value -> add(arg, -value) } + public operator fun N.minus(arg: T): N = map(this) { value -> add(arg, -value) } - operator fun T.plus(arg: N): N = map(arg) { value -> add(this@plus, value) } - operator fun T.minus(arg: N): N = map(arg) { value -> add(-this@minus, value) } + public operator fun T.plus(arg: N): N = map(arg) { value -> add(this@plus, value) } + public operator fun T.minus(arg: N): N = map(arg) { value -> add(-this@minus, value) } - companion object + public companion object } /** * An nd-ring over element ring */ -interface NDRing, N : NDStructure> : Ring, NDSpace { - +public interface NDRing, N : NDStructure> : Ring, NDSpace { /** * Element-by-element multiplication */ override fun multiply(a: N, b: N): N = combine(a, b) { aValue, bValue -> multiply(aValue, bValue) } //TODO move to extensions after KEEP-176 - operator fun N.times(arg: T): N = map(this) { value -> multiply(arg, value) } + public operator fun N.times(arg: T): N = map(this) { value -> multiply(arg, value) } - operator fun T.times(arg: N): N = map(arg) { value -> multiply(this@times, value) } + public operator fun T.times(arg: N): N = map(arg) { value -> multiply(this@times, value) } - companion object + public companion object } /** @@ -111,17 +104,16 @@ interface NDRing, N : NDStructure> : Ring, NDSpace * @param N the type of ND structure. * @param F field of structure elements. */ -interface NDField, N : NDStructure> : Field, NDRing { - +public interface NDField, N : NDStructure> : Field, NDRing { /** * Element-by-element division */ override fun divide(a: N, b: N): N = combine(a, b) { aValue, bValue -> divide(aValue, bValue) } //TODO move to extensions after KEEP-176 - operator fun N.div(arg: T): N = map(this) { value -> divide(arg, value) } + public operator fun N.div(arg: T): N = map(this) { value -> divide(arg, value) } - operator fun T.div(arg: N): N = map(arg) { divide(it, this@div) } + public operator fun T.div(arg: N): N = map(arg) { divide(it, this@div) } companion object { diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt index 6533f64be..ac2adbe9b 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt @@ -3,9 +3,9 @@ package scientifik.kmath.structures import scientifik.kmath.operations.FieldElement import scientifik.kmath.operations.RealField -typealias RealNDElement = BufferedNDFieldElement +public typealias RealNDElement = BufferedNDFieldElement -class RealNDField(override val shape: IntArray) : +public class RealNDField(override val shape: IntArray) : BufferedNDField, ExtendedNDField> { @@ -15,7 +15,7 @@ class RealNDField(override val shape: IntArray) : override val zero: RealNDElement by lazy { produce { zero } } override val one: RealNDElement by lazy { produce { one } } - inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Double): Buffer = + public inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Double): Buffer = RealBuffer(DoubleArray(size) { initializer(it) }) /** @@ -90,7 +90,7 @@ class RealNDField(override val shape: IntArray) : /** * Fast element production using function inlining */ -inline fun BufferedNDField.produceInline(crossinline initializer: RealField.(Int) -> Double): RealNDElement { +public inline fun BufferedNDField.produceInline(crossinline initializer: RealField.(Int) -> Double): RealNDElement { val array = DoubleArray(strides.linearSize) { offset -> RealField.initializer(offset) } return BufferedNDFieldElement(this, RealBuffer(array)) } @@ -98,13 +98,13 @@ inline fun BufferedNDField.produceInline(crossinline initiali /** * Map one [RealNDElement] using function with indices. */ -inline fun RealNDElement.mapIndexed(crossinline transform: RealField.(index: IntArray, Double) -> Double): RealNDElement = +public inline fun RealNDElement.mapIndexed(crossinline transform: RealField.(index: IntArray, Double) -> Double): RealNDElement = context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) } /** * Map one [RealNDElement] using function without indices. */ -inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> Double): RealNDElement { +public inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> Double): RealNDElement { val array = DoubleArray(strides.linearSize) { offset -> RealField.transform(buffer[offset]) } return BufferedNDFieldElement(context, RealBuffer(array)) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt index 9aa674177..82deb9275 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt @@ -8,7 +8,7 @@ import kotlin.contracts.contract * * @property array the underlying array. */ -inline class ShortBuffer(val array: ShortArray) : MutableBuffer { +public inline class ShortBuffer(public val array: ShortArray) : MutableBuffer { override val size: Int get() = array.size override operator fun get(index: Int): Short = array[index] @@ -30,7 +30,7 @@ inline class ShortBuffer(val array: ShortArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun ShortBuffer(size: Int, init: (Int) -> Short): ShortBuffer { +public inline fun ShortBuffer(size: Int, init: (Int) -> Short): ShortBuffer { contract { callsInPlace(init) } return ShortBuffer(ShortArray(size) { init(it) }) } @@ -38,12 +38,12 @@ inline fun ShortBuffer(size: Int, init: (Int) -> Short): ShortBuffer { /** * Returns a new [ShortBuffer] of given elements. */ -fun ShortBuffer(vararg shorts: Short): ShortBuffer = ShortBuffer(shorts) +public fun ShortBuffer(vararg shorts: Short): ShortBuffer = ShortBuffer(shorts) /** * Returns a [ShortArray] containing all of the elements of this [MutableBuffer]. */ -val MutableBuffer.array: ShortArray +public val MutableBuffer.array: ShortArray get() = (if (this is ShortBuffer) array else ShortArray(size) { get(it) }) /** @@ -52,4 +52,4 @@ val MutableBuffer.array: ShortArray * @receiver the array. * @return the new buffer. */ -fun ShortArray.asBuffer(): ShortBuffer = ShortBuffer(this) +public fun ShortArray.asBuffer(): ShortBuffer = ShortBuffer(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt index f404a2a27..9a2ec1c88 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt @@ -2,20 +2,19 @@ package scientifik.kmath.structures import scientifik.kmath.operations.RingElement import scientifik.kmath.operations.ShortRing +import kotlin.contracts.contract +public typealias ShortNDElement = BufferedNDRingElement -typealias ShortNDElement = BufferedNDRingElement - -class ShortNDRing(override val shape: IntArray) : +public class ShortNDRing(override val shape: IntArray) : BufferedNDRing { override val strides: Strides = DefaultStrides(shape) - override val elementContext: ShortRing get() = ShortRing override val zero: ShortNDElement by lazy { produce { zero } } override val one: ShortNDElement by lazy { produce { one } } - inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer = + public inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer = ShortBuffer(ShortArray(size) { initializer(it) }) /** @@ -70,7 +69,8 @@ class ShortNDRing(override val shape: IntArray) : /** * Fast element production using function inlining. */ -inline fun BufferedNDRing.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement { +public inline fun BufferedNDRing.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement { + contract { callsInPlace(initializer) } val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) } return BufferedNDRingElement(this, ShortBuffer(array)) } @@ -78,7 +78,7 @@ inline fun BufferedNDRing.produceInline(crossinline initialize /** * Element by element application of any operation on elements to the whole array. */ -operator fun Function1.invoke(ndElement: ShortNDElement): ShortNDElement = +public operator fun Function1.invoke(ndElement: ShortNDElement): ShortNDElement = ndElement.context.produceInline { i -> invoke(ndElement.buffer[i]) } @@ -87,11 +87,11 @@ operator fun Function1.invoke(ndElement: ShortNDElement): ShortNDE /** * Summation operation for [ShortNDElement] and single element. */ -operator fun ShortNDElement.plus(arg: Short): ShortNDElement = +public operator fun ShortNDElement.plus(arg: Short): ShortNDElement = context.produceInline { i -> (buffer[i] + arg).toShort() } /** * Subtraction operation between [ShortNDElement] and single element. */ -operator fun ShortNDElement.minus(arg: Short): ShortNDElement = +public operator fun ShortNDElement.minus(arg: Short): ShortNDElement = context.produceInline { i -> (buffer[i] - arg).toShort() } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt index eeb6bd3dc..e0ae4d4a2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt @@ -3,26 +3,22 @@ package scientifik.kmath.structures /** * A structure that is guaranteed to be two-dimensional */ -interface Structure2D : NDStructure { - val rowNum: Int get() = shape[0] - val colNum: Int get() = shape[1] +public interface Structure2D : NDStructure { + public val rowNum: Int get() = shape[0] + public val colNum: Int get() = shape[1] - operator fun get(i: Int, j: Int): T + public operator fun get(i: Int, j: Int): T override operator fun get(index: IntArray): T { require(index.size == 2) { "Index dimension mismatch. Expected 2 but found ${index.size}" } return get(index[0], index[1]) } - val rows: Buffer> - get() = VirtualBuffer(rowNum) { i -> - VirtualBuffer(colNum) { j -> get(i, j) } - } + public val rows: Buffer> + get() = VirtualBuffer(rowNum) { i -> VirtualBuffer(colNum) { j -> get(i, j) } } - val columns: Buffer> - get() = VirtualBuffer(colNum) { j -> - VirtualBuffer(rowNum) { i -> get(i, j) } - } + public val columns: Buffer> + get() = VirtualBuffer(colNum) { j -> VirtualBuffer(rowNum) { i -> get(i, j) } } override fun elements(): Sequence> = sequence { for (i in (0 until rowNum)) { @@ -32,7 +28,7 @@ interface Structure2D : NDStructure { } } - companion object + public companion object } /** @@ -49,10 +45,10 @@ private inline class Structure2DWrapper(val structure: NDStructure) : Stru /** * Represent a [NDStructure] as [Structure1D]. Throw error in case of dimension mismatch */ -fun NDStructure.as2D(): Structure2D = if (shape.size == 2) { +public fun NDStructure.as2D(): Structure2D = if (shape.size == 2) { Structure2DWrapper(this) } else { error("Can't create 2d-structure from ${shape.size}d-structure") } -typealias Matrix = Structure2D +public typealias Matrix = Structure2D diff --git a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt b/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt index f10ef24da..e5ec374c9 100644 --- a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt +++ b/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt @@ -7,7 +7,7 @@ import java.math.MathContext /** * A field over [BigInteger]. */ -object JBigIntegerField : Field { +public object JBigIntegerField : Field { override val zero: BigInteger get() = BigInteger.ZERO @@ -28,7 +28,7 @@ object JBigIntegerField : Field { * * @property mathContext the [MathContext] to use. */ -abstract class JBigDecimalFieldBase internal constructor(val mathContext: MathContext = MathContext.DECIMAL64) : +public abstract class JBigDecimalFieldBase internal constructor(public val mathContext: MathContext = MathContext.DECIMAL64) : Field, PowerOperations { override val zero: BigDecimal @@ -54,6 +54,6 @@ abstract class JBigDecimalFieldBase internal constructor(val mathContext: MathCo /** * A field over [BigDecimal]. */ -class JBigDecimalField(mathContext: MathContext = MathContext.DECIMAL64) : JBigDecimalFieldBase(mathContext) { - companion object : JBigDecimalFieldBase() +public class JBigDecimalField(mathContext: MathContext = MathContext.DECIMAL64) : JBigDecimalFieldBase(mathContext) { + public companion object : JBigDecimalFieldBase() } diff --git a/kmath-coroutines/build.gradle.kts b/kmath-coroutines/build.gradle.kts index 4469a9ef6..e108c2755 100644 --- a/kmath-coroutines/build.gradle.kts +++ b/kmath-coroutines/build.gradle.kts @@ -1,12 +1,8 @@ -plugins { - id("scientifik.mpp") - //id("scientifik.atomic") -} +plugins { id("ru.mipt.npm.mpp") } kotlin.sourceSets { all { with(languageSettings) { - useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") useExperimentalAnnotation("kotlinx.coroutines.InternalCoroutinesApi") useExperimentalAnnotation("kotlinx.coroutines.ExperimentalCoroutinesApi") useExperimentalAnnotation("kotlinx.coroutines.FlowPreview") @@ -16,15 +12,7 @@ kotlin.sourceSets { commonMain { dependencies { api(project(":kmath-core")) - api("org.jetbrains.kotlinx:kotlinx-coroutines-core-common:${Scientifik.coroutinesVersion}") + api("org.jetbrains.kotlinx:kotlinx-coroutines-core:${ru.mipt.npm.gradle.KScienceVersions.coroutinesVersion}") } } - - jvmMain { - dependencies { api("org.jetbrains.kotlinx:kotlinx-coroutines-core:${Scientifik.coroutinesVersion}") } - } - - jsMain { - dependencies { api("org.jetbrains.kotlinx:kotlinx-coroutines-core-js:${Scientifik.coroutinesVersion}") } - } } diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt index f0ffd13cd..e899f8ece 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt @@ -26,31 +26,31 @@ import kotlinx.coroutines.sync.withLock * A not-necessary-Markov chain of some type * @param R - the chain element type */ -interface Chain : Flow { +public interface Chain : Flow { /** * Generate next value, changing state if needed */ - suspend fun next(): R + public suspend fun next(): R /** * Create a copy of current chain state. Consuming resulting chain does not affect initial chain */ - fun fork(): Chain + public fun fork(): Chain override suspend fun collect(collector: FlowCollector): Unit = flow { while (true) emit(next()) }.collect(collector) - companion object + public companion object } -fun Iterator.asChain(): Chain = SimpleChain { next() } -fun Sequence.asChain(): Chain = iterator().asChain() +public fun Iterator.asChain(): Chain = SimpleChain { next() } +public fun Sequence.asChain(): Chain = iterator().asChain() /** * A simple chain of independent tokens */ -class SimpleChain(private val gen: suspend () -> R) : Chain { +public class SimpleChain(private val gen: suspend () -> R) : Chain { override suspend fun next(): R = gen() override fun fork(): Chain = this } @@ -58,13 +58,13 @@ class SimpleChain(private val gen: suspend () -> R) : Chain { /** * A stateless Markov chain */ -class MarkovChain(private val seed: suspend () -> R, private val gen: suspend (R) -> R) : Chain { +public class MarkovChain(private val seed: suspend () -> R, private val gen: suspend (R) -> R) : Chain { private val mutex = Mutex() private var value: R? = null - fun value(): R? = value + public fun value(): R? = value override suspend fun next(): R { mutex.withLock { @@ -84,7 +84,7 @@ class MarkovChain(private val seed: suspend () -> R, private val ge * @param S - the state of the chain * @param forkState - the function to copy current state without modifying it */ -class StatefulChain( +public class StatefulChain( private val state: S, private val seed: S.() -> R, private val forkState: ((S) -> S), @@ -94,7 +94,7 @@ class StatefulChain( private var value: R? = null - fun value(): R? = value + public fun value(): R? = value override suspend fun next(): R { mutex.withLock { @@ -110,19 +110,17 @@ class StatefulChain( /** * A chain that repeats the same value */ -class ConstantChain(val value: T) : Chain { +public class ConstantChain(public val value: T) : Chain { override suspend fun next(): T = value - override fun fork(): Chain { - return this - } + override fun fork(): Chain = this } /** * Map the chain result using suspended transformation. Initial chain result can no longer be safely consumed * since mapped chain consumes tokens. Accepts regular transformation function */ -fun Chain.map(func: suspend (T) -> R): Chain = object : Chain { +public fun Chain.map(func: suspend (T) -> R): Chain = object : Chain { override suspend fun next(): R = func(this@map.next()) override fun fork(): Chain = this@map.fork().map(func) } @@ -130,7 +128,7 @@ fun Chain.map(func: suspend (T) -> R): Chain = object : Chain { /** * [block] must be a pure function or at least not use external random variables, otherwise fork could be broken */ -fun Chain.filter(block: (T) -> Boolean): Chain = object : Chain { +public fun Chain.filter(block: (T) -> Boolean): Chain = object : Chain { override suspend fun next(): T { var next: T @@ -146,12 +144,12 @@ fun Chain.filter(block: (T) -> Boolean): Chain = object : Chain { /** * Map the whole chain */ -fun Chain.collect(mapper: suspend (Chain) -> R): Chain = object : Chain { +public fun Chain.collect(mapper: suspend (Chain) -> R): Chain = object : Chain { override suspend fun next(): R = mapper(this@collect) override fun fork(): Chain = this@collect.fork().collect(mapper) } -fun Chain.collectWithState(state: S, stateFork: (S) -> S, mapper: suspend S.(Chain) -> R): Chain = +public fun Chain.collectWithState(state: S, stateFork: (S) -> S, mapper: suspend S.(Chain) -> R): Chain = object : Chain { override suspend fun next(): R = state.mapper(this@collectWithState) @@ -162,7 +160,7 @@ fun Chain.collectWithState(state: S, stateFork: (S) -> S, mapper: s /** * Zip two chains together using given transformation */ -fun Chain.zip(other: Chain, block: suspend (T, U) -> R): Chain = object : Chain { +public fun Chain.zip(other: Chain, block: suspend (T, U) -> R): Chain = object : Chain { override suspend fun next(): R = block(this@zip.next(), other.next()) override fun fork(): Chain = this@zip.fork().zip(other.fork(), block) } diff --git a/kmath-dimensions/build.gradle.kts b/kmath-dimensions/build.gradle.kts index dda6cd2f0..0a36e4435 100644 --- a/kmath-dimensions/build.gradle.kts +++ b/kmath-dimensions/build.gradle.kts @@ -1,8 +1,6 @@ -plugins { - id("scientifik.mpp") -} +plugins { id("ru.mipt.npm.mpp") } -description = "A proof of concept module for adding typ-safe dimensions to structures" +description = "A proof of concept module for adding type-safe dimensions to structures" kotlin.sourceSets { commonMain { @@ -11,9 +9,9 @@ kotlin.sourceSets { } } - jvmMain{ - dependencies{ + jvmMain { + dependencies { api(kotlin("reflect")) } } -} \ No newline at end of file +} diff --git a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt index f40483cfd..e96367443 100644 --- a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt +++ b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt @@ -6,30 +6,28 @@ import kotlin.reflect.KClass * An abstract class which is not used in runtime. Designates a size of some structure. * Could be replaced later by fully inline constructs */ -interface Dimension { +public interface Dimension { + public val dim: UInt - val dim: UInt - companion object { - - } + public companion object } -fun KClass.dim(): UInt = Dimension.resolve(this).dim +public fun KClass.dim(): UInt = Dimension.resolve(this).dim -expect fun Dimension.Companion.resolve(type: KClass): D +public expect fun Dimension.Companion.resolve(type: KClass): D -expect fun Dimension.Companion.of(dim: UInt): Dimension +public expect fun Dimension.Companion.of(dim: UInt): Dimension -inline fun Dimension.Companion.dim(): UInt = D::class.dim() +public inline fun Dimension.Companion.dim(): UInt = D::class.dim() -object D1 : Dimension { +public object D1 : Dimension { override val dim: UInt get() = 1U } -object D2 : Dimension { +public object D2 : Dimension { override val dim: UInt get() = 2U } -object D3 : Dimension { +public object D3 : Dimension { override val dim: UInt get() = 3U } diff --git a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt index bbd580629..e5cc451d1 100644 --- a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt @@ -9,11 +9,11 @@ private val dimensionMap = hashMapOf( ) @Suppress("UNCHECKED_CAST") -actual fun Dimension.Companion.resolve(type: KClass): D { +public actual fun Dimension.Companion.resolve(type: KClass): D { return dimensionMap.entries.find { it.value::class == type }?.value as? D ?: error("Can't resolve dimension $type") } -actual fun Dimension.Companion.of(dim: UInt): Dimension { +public actual fun Dimension.Companion.of(dim: UInt): Dimension { return dimensionMap.getOrPut(dim) { object : Dimension { override val dim: UInt get() = dim diff --git a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt index e8fe8f59b..42310cb3a 100644 --- a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt @@ -2,11 +2,11 @@ package scientifik.kmath.dimensions import kotlin.reflect.KClass -actual fun Dimension.Companion.resolve(type: KClass): D{ +public actual fun Dimension.Companion.resolve(type: KClass): D{ return type.objectInstance ?: error("No object instance for dimension class") } -actual fun Dimension.Companion.of(dim: UInt): Dimension{ +public actual fun Dimension.Companion.of(dim: UInt): Dimension{ return when(dim){ 1u -> D1 2u -> D2 diff --git a/kmath-for-real/build.gradle.kts b/kmath-for-real/build.gradle.kts index 46d2682f7..00abcb934 100644 --- a/kmath-for-real/build.gradle.kts +++ b/kmath-for-real/build.gradle.kts @@ -1,6 +1,7 @@ -plugins { id("scientifik.mpp") } +plugins { id("ru.mipt.npm.mpp") } -kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) } } +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-core")) + } } diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt index 3752fc3ca..a3b41288a 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt @@ -25,20 +25,20 @@ import kotlin.math.pow * Functions that help create a real (Double) matrix */ -typealias RealMatrix = Matrix +public typealias RealMatrix = Matrix -fun realMatrix(rowNum: Int, colNum: Int, initializer: (i: Int, j: Int) -> Double): RealMatrix = +public fun realMatrix(rowNum: Int, colNum: Int, initializer: (i: Int, j: Int) -> Double): RealMatrix = MatrixContext.real.produce(rowNum, colNum, initializer) -fun Array.toMatrix(): RealMatrix { +public fun Array.toMatrix(): RealMatrix { return MatrixContext.real.produce(size, this[0].size) { row, col -> this[row][col] } } -fun Sequence.toMatrix(): RealMatrix = toList().let { +public fun Sequence.toMatrix(): RealMatrix = toList().let { MatrixContext.real.produce(it.size, it[0].size) { row, col -> it[row][col] } } -fun Matrix.repeatStackVertical(n: Int): RealMatrix = +public fun Matrix.repeatStackVertical(n: Int): RealMatrix = VirtualMatrix(rowNum * n, colNum) { row, col -> get(if (row == 0) 0 else row % rowNum, col) } @@ -47,37 +47,37 @@ fun Matrix.repeatStackVertical(n: Int): RealMatrix = * Operations for matrix and real number */ -operator fun Matrix.times(double: Double): RealMatrix = +public operator fun Matrix.times(double: Double): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] * double } -operator fun Matrix.plus(double: Double): RealMatrix = +public operator fun Matrix.plus(double: Double): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] + double } -operator fun Matrix.minus(double: Double): RealMatrix = +public operator fun Matrix.minus(double: Double): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] - double } -operator fun Matrix.div(double: Double): RealMatrix = +public operator fun Matrix.div(double: Double): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] / double } -operator fun Double.times(matrix: Matrix): RealMatrix = +public operator fun Double.times(matrix: Matrix): RealMatrix = MatrixContext.real.produce(matrix.rowNum, matrix.colNum) { row, col -> this * matrix[row, col] } -operator fun Double.plus(matrix: Matrix): RealMatrix = +public operator fun Double.plus(matrix: Matrix): RealMatrix = MatrixContext.real.produce(matrix.rowNum, matrix.colNum) { row, col -> this + matrix[row, col] } -operator fun Double.minus(matrix: Matrix): RealMatrix = +public operator fun Double.minus(matrix: Matrix): RealMatrix = MatrixContext.real.produce(matrix.rowNum, matrix.colNum) { row, col -> this - matrix[row, col] } @@ -91,11 +91,11 @@ operator fun Double.minus(matrix: Matrix): RealMatrix = * Per-element (!) square and power operations */ -fun Matrix.square(): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> +public fun Matrix.square(): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col].pow(2) } -fun Matrix.pow(n: Int): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { i, j -> +public fun Matrix.pow(n: Int): RealMatrix = MatrixContext.real.produce(rowNum, colNum) { i, j -> this[i, j].pow(n) } @@ -103,24 +103,20 @@ fun Matrix.pow(n: Int): RealMatrix = MatrixContext.real.produce(rowNum, * Operations on two matrices (per-element!) */ -operator fun Matrix.times(other: Matrix): RealMatrix = - MatrixContext.real.produce(rowNum, colNum) { row, col -> - this[row, col] * other[row, col] - } +public operator fun Matrix.times(other: Matrix): RealMatrix = + MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] * other[row, col] } -operator fun Matrix.plus(other: Matrix): RealMatrix = +public operator fun Matrix.plus(other: Matrix): RealMatrix = MatrixContext.real.add(this, other) -operator fun Matrix.minus(other: Matrix): RealMatrix = - MatrixContext.real.produce(rowNum, colNum) { row, col -> - this[row, col] - other[row, col] - } +public operator fun Matrix.minus(other: Matrix): RealMatrix = + MatrixContext.real.produce(rowNum, colNum) { row, col -> this[row, col] - other[row, col] } /* * Operations on columns */ -inline fun Matrix.appendColumn(crossinline mapper: (Buffer) -> Double): Matrix { +public inline fun Matrix.appendColumn(crossinline mapper: (Buffer) -> Double): Matrix { contract { callsInPlace(mapper) } return MatrixContext.real.produce(rowNum, colNum + 1) { row, col -> @@ -131,28 +127,28 @@ inline fun Matrix.appendColumn(crossinline mapper: (Buffer) -> D } } -fun Matrix.extractColumns(columnRange: IntRange): RealMatrix = +public fun Matrix.extractColumns(columnRange: IntRange): RealMatrix = MatrixContext.real.produce(rowNum, columnRange.count()) { row, col -> this[row, columnRange.first + col] } -fun Matrix.extractColumn(columnIndex: Int): RealMatrix = +public fun Matrix.extractColumn(columnIndex: Int): RealMatrix = extractColumns(columnIndex..columnIndex) -fun Matrix.sumByColumn(): RealBuffer = RealBuffer(colNum) { j -> +public fun Matrix.sumByColumn(): RealBuffer = RealBuffer(colNum) { j -> val column = columns[j] elementContext { sum(column.asIterable()) } } -fun Matrix.minByColumn(): RealBuffer = RealBuffer(colNum) { j -> +public fun Matrix.minByColumn(): RealBuffer = RealBuffer(colNum) { j -> columns[j].asIterable().min() ?: error("Cannot produce min on empty column") } -fun Matrix.maxByColumn(): RealBuffer = RealBuffer(colNum) { j -> +public fun Matrix.maxByColumn(): RealBuffer = RealBuffer(colNum) { j -> columns[j].asIterable().max() ?: error("Cannot produce min on empty column") } -fun Matrix.averageByColumn(): RealBuffer = RealBuffer(colNum) { j -> +public fun Matrix.averageByColumn(): RealBuffer = RealBuffer(colNum) { j -> columns[j].asIterable().average() } @@ -160,7 +156,7 @@ fun Matrix.averageByColumn(): RealBuffer = RealBuffer(colNum) { j -> * Operations processing all elements */ -fun Matrix.sum(): Double = elements().map { (_, value) -> value }.sum() -fun Matrix.min(): Double? = elements().map { (_, value) -> value }.min() -fun Matrix.max(): Double? = elements().map { (_, value) -> value }.max() -fun Matrix.average(): Double = elements().map { (_, value) -> value }.average() +public fun Matrix.sum(): Double = elements().map { (_, value) -> value }.sum() +public fun Matrix.min(): Double? = elements().map { (_, value) -> value }.min() +public fun Matrix.max(): Double? = elements().map { (_, value) -> value }.max() +public fun Matrix.average(): Double = elements().map { (_, value) -> value }.average() diff --git a/kmath-functions/build.gradle.kts b/kmath-functions/build.gradle.kts index 46d2682f7..00abcb934 100644 --- a/kmath-functions/build.gradle.kts +++ b/kmath-functions/build.gradle.kts @@ -1,6 +1,7 @@ -plugins { id("scientifik.mpp") } +plugins { id("ru.mipt.npm.mpp") } -kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) } } +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-core")) + } } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt index 16f8aa12b..b11469ccf 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt @@ -2,17 +2,17 @@ package scientifik.kmath.functions import scientifik.kmath.operations.Ring -interface Piecewise { - fun findPiece(arg: T): R? +public fun interface Piecewise { + public fun findPiece(arg: T): R? } -interface PiecewisePolynomial : +public fun interface PiecewisePolynomial : Piecewise> /** * Ordered list of pieces in piecewise function */ -class OrderedPiecewisePolynomial>(delimeter: T) : +public class OrderedPiecewisePolynomial>(delimeter: T) : PiecewisePolynomial { private val delimiters: ArrayList = arrayListOf(delimeter) @@ -22,13 +22,13 @@ class OrderedPiecewisePolynomial>(delimeter: T) : * Dynamically add a piece to the "right" side (beyond maximum argument value of previous piece) * @param right new rightmost position. If is less then current rightmost position, a error is thrown. */ - fun putRight(right: T, piece: Polynomial) { + public fun putRight(right: T, piece: Polynomial) { require(right > delimiters.last()) { "New delimiter should be to the right of old one" } delimiters.add(right) pieces.add(piece) } - fun putLeft(left: T, piece: Polynomial) { + public fun putLeft(left: T, piece: Polynomial) { require(left < delimiters.first()) { "New delimiter should be to the left of old one" } delimiters.add(0, left) pieces.add(0, piece) @@ -51,7 +51,7 @@ class OrderedPiecewisePolynomial>(delimeter: T) : /** * Return a value of polynomial function with given [ring] an given [arg] or null if argument is outside of piecewise definition. */ -fun , C : Ring> PiecewisePolynomial.value(ring: C, arg: T): T? = +public fun , C : Ring> PiecewisePolynomial.value(ring: C, arg: T): T? = findPiece(arg)?.value(ring, arg) -fun , C : Ring> PiecewisePolynomial.asFunction(ring: C): (T) -> T? = { value(ring, it) } \ No newline at end of file +public fun , C : Ring> PiecewisePolynomial.asFunction(ring: C): (T) -> T? = { value(ring, it) } \ No newline at end of file diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index c4470ad27..35f1a1e16 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -3,7 +3,6 @@ package scientifik.kmath.functions import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Space import scientifik.kmath.operations.invoke -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.math.max @@ -13,14 +12,14 @@ import kotlin.math.pow * Polynomial coefficients without fixation on specific context they are applied to * @param coefficients constant is the leftmost coefficient */ -inline class Polynomial(val coefficients: List) { - constructor(vararg coefficients: T) : this(coefficients.toList()) +public inline class Polynomial(public val coefficients: List) { + public constructor(vararg coefficients: T) : this(coefficients.toList()) } -fun Polynomial.value(): Double = +public fun Polynomial.value(): Double = coefficients.reduceIndexed { index: Int, acc: Double, d: Double -> acc + d.pow(index) } -fun > Polynomial.value(ring: C, arg: T): T = ring { +public fun > Polynomial.value(ring: C, arg: T): T = ring { if (coefficients.isEmpty()) return@ring zero var res = coefficients.first() var powerArg = arg @@ -37,20 +36,19 @@ fun > Polynomial.value(ring: C, arg: T): T = ring { /** * Represent a polynomial as a context-dependent function */ -fun > Polynomial.asMathFunction(): MathFunction = object : - MathFunction { - override operator fun C.invoke(arg: T): T = value(this, arg) -} +public fun > Polynomial.asMathFunction(): MathFunction = + MathFunction { arg -> value(this, arg) } /** * Represent the polynomial as a regular context-less function */ -fun > Polynomial.asFunction(ring: C): (T) -> T = { value(ring, it) } +public fun > Polynomial.asFunction(ring: C): (T) -> T = { value(ring, it) } /** * An algebra for polynomials */ -class PolynomialSpace>(val ring: C) : Space> { +public class PolynomialSpace>(public val ring: C) : Space> { + override val zero: Polynomial = Polynomial(emptyList()) override fun add(a: Polynomial, b: Polynomial): Polynomial { val dim = max(a.coefficients.size, b.coefficients.size) @@ -65,13 +63,10 @@ class PolynomialSpace>(val ring: C) : Space> override fun multiply(a: Polynomial, k: Number): Polynomial = ring { Polynomial(List(a.coefficients.size) { index -> a.coefficients[index] * k }) } - override val zero: Polynomial = - Polynomial(emptyList()) - - operator fun Polynomial.invoke(arg: T): T = value(ring, arg) + public operator fun Polynomial.invoke(arg: T): T = value(ring, arg) } -inline fun , R> C.polynomial(block: PolynomialSpace.() -> R): R { +public inline fun , R> C.polynomial(block: PolynomialSpace.() -> R): R { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return PolynomialSpace(this).block() } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt index 2b822b3ba..ce6156c0b 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt @@ -9,25 +9,25 @@ import scientifik.kmath.operations.RealField * @param C source algebra constraint * @param R result type */ -interface MathFunction, R> { - operator fun C.invoke(arg: T): R +public fun interface MathFunction, R> { + public operator fun C.invoke(arg: T): R } -fun MathFunction.invoke(arg: Double): R = RealField.invoke(arg) +public fun MathFunction.invoke(arg: Double): R = RealField.invoke(arg) /** * A suspendable function defined in algebraic context */ -interface SuspendableMathFunction, R> { - suspend operator fun C.invoke(arg: T): R +// TODO make fun interface, when the new JVM IR is enabled +public interface SuspendableMathFunction, R> { + public suspend operator fun C.invoke(arg: T): R } -suspend fun SuspendableMathFunction.invoke(arg: Double) = RealField.invoke(arg) - +public suspend fun SuspendableMathFunction.invoke(arg: Double) = RealField.invoke(arg) /** * A parametric function with parameter */ -interface ParametricFunction> { - operator fun C.invoke(arg: T, parameter: P): T +public fun interface ParametricFunction> { + public operator fun C.invoke(arg: T, parameter: P): T } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt index 8d83e4198..95e734da8 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt @@ -6,16 +6,16 @@ import scientifik.kmath.operations.Ring import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.asBuffer -interface Interpolator { - fun interpolate(points: XYPointSet): (X) -> Y +public fun interface Interpolator { + public fun interpolate(points: XYPointSet): (X) -> Y } -interface PolynomialInterpolator> : Interpolator { - val algebra: Ring +public interface PolynomialInterpolator> : Interpolator { + public val algebra: Ring - fun getDefaultValue(): T = error("Out of bounds") + public fun getDefaultValue(): T = error("Out of bounds") - fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial + public fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial override fun interpolate(points: XYPointSet): (T) -> T = { x -> interpolatePolynomials(points).value(algebra, x) ?: getDefaultValue() diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt index a7925180d..03a4625fc 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt @@ -9,7 +9,7 @@ import scientifik.kmath.operations.invoke /** * Reference JVM implementation: https://github.com/apache/commons-math/blob/master/src/main/java/org/apache/commons/math4/analysis/interpolation/LinearInterpolator.java */ -class LinearInterpolator>(override val algebra: Field) : PolynomialInterpolator { +public class LinearInterpolator>(override val algebra: Field) : PolynomialInterpolator { override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { require(points.size > 0) { "Point array should not be empty" } insureSorted(points) diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt index b709c4e87..c8ab42bf4 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt @@ -11,9 +11,9 @@ import scientifik.kmath.structures.MutableBufferFactory * Generic spline interpolator. Not recommended for performance critical places, use platform-specific and type specific ones. * Based on https://github.com/apache/commons-math/blob/eb57d6d457002a0bb5336d789a3381a24599affe/src/main/java/org/apache/commons/math4/analysis/interpolation/SplineInterpolator.java */ -class SplineInterpolator>( +public class SplineInterpolator>( override val algebra: Field, - val bufferFactory: MutableBufferFactory + public val bufferFactory: MutableBufferFactory ) : PolynomialInterpolator { //TODO possibly optimize zeroed buffers diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt index 56953f9fc..19297036b 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt @@ -3,21 +3,21 @@ package scientifik.kmath.interpolation import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.Structure2D -interface XYPointSet { - val size: Int - val x: Buffer - val y: Buffer +public interface XYPointSet { + public val size: Int + public val x: Buffer + public val y: Buffer } -interface XYZPointSet : XYPointSet { - val z: Buffer +public interface XYZPointSet : XYPointSet { + public val z: Buffer } internal fun > insureSorted(points: XYPointSet) { for (i in 0 until points.size - 1) require(points.x[i + 1] > points.x[i]) { "Input data is not sorted at index $i" } } -class NDStructureColumn(val structure: Structure2D, val column: Int) : Buffer { +public class NDStructureColumn(public val structure: Structure2D, public val column: Int) : Buffer { init { require(column < structure.colNum) { "Column index is outside of structure column range" } } @@ -33,7 +33,7 @@ class NDStructureColumn(val structure: Structure2D, val column: Int) : Buf }.iterator() } -class BufferXYPointSet(override val x: Buffer, override val y: Buffer) : XYPointSet { +public class BufferXYPointSet(override val x: Buffer, override val y: Buffer) : XYPointSet { init { require(x.size == y.size) { "Sizes of x and y buffers should be the same" } } @@ -42,11 +42,12 @@ class BufferXYPointSet(override val x: Buffer, override val y: Buffer Structure2D.asXYPointSet(): XYPointSet { +public fun Structure2D.asXYPointSet(): XYPointSet { require(shape[1] == 2) { "Structure second dimension should be of size 2" } + return object : XYPointSet { override val size: Int get() = this@asXYPointSet.shape[0] override val x: Buffer get() = NDStructureColumn(this@asXYPointSet, 0) override val y: Buffer get() = NDStructureColumn(this@asXYPointSet, 1) } -} \ No newline at end of file +} diff --git a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt b/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt index 23acd835c..540494caf 100644 --- a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt +++ b/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt @@ -6,7 +6,6 @@ import scientifik.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals - class LinearInterpolatorTest { @Test fun testInterpolation() { @@ -24,4 +23,4 @@ class LinearInterpolatorTest { assertEquals(2.0, function(1.5)) assertEquals(3.0, function(2.0)) } -} \ No newline at end of file +} diff --git a/kmath-geometry/build.gradle.kts b/kmath-geometry/build.gradle.kts index 39aa833ad..00abcb934 100644 --- a/kmath-geometry/build.gradle.kts +++ b/kmath-geometry/build.gradle.kts @@ -1,9 +1,7 @@ -plugins { - id("scientifik.mpp") -} +plugins { id("ru.mipt.npm.mpp") } kotlin.sourceSets.commonMain { dependencies { api(project(":kmath-core")) } -} \ No newline at end of file +} diff --git a/kmath-histograms/build.gradle.kts b/kmath-histograms/build.gradle.kts index 993bfed8e..7de21ad89 100644 --- a/kmath-histograms/build.gradle.kts +++ b/kmath-histograms/build.gradle.kts @@ -1,10 +1,8 @@ -plugins { - id("scientifik.mpp") -} +plugins { id("ru.mipt.npm.mpp") } kotlin.sourceSets.commonMain { dependencies { api(project(":kmath-core")) api(project(":kmath-for-real")) } -} \ No newline at end of file +} diff --git a/kmath-koma/build.gradle.kts b/kmath-koma/build.gradle.kts index 26955bca7..606113e75 100644 --- a/kmath-koma/build.gradle.kts +++ b/kmath-koma/build.gradle.kts @@ -1,10 +1,6 @@ -plugins { - id("scientifik.mpp") -} +plugins { id("ru.mipt.npm.mpp") } -repositories { - maven("http://dl.bintray.com/kyonifer/maven") -} +repositories.maven("http://dl.bintray.com/kyonifer/maven") kotlin.sourceSets { commonMain { @@ -13,16 +9,19 @@ kotlin.sourceSets { api("com.kyonifer:koma-core-api-common:0.12") } } + jvmMain { dependencies { api("com.kyonifer:koma-core-api-jvm:0.12") } } + jvmTest { dependencies { implementation("com.kyonifer:koma-core-ejml:0.12") } } + jsMain { dependencies { api("com.kyonifer:koma-core-api-js:0.12") diff --git a/kmath-memory/build.gradle.kts b/kmath-memory/build.gradle.kts index 44a5ae24d..94527a6a3 100644 --- a/kmath-memory/build.gradle.kts +++ b/kmath-memory/build.gradle.kts @@ -1,2 +1 @@ -plugins { id("scientifik.mpp") } -kotlin.sourceSets.all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } +plugins { id("ru.mipt.npm.mpp") } diff --git a/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt b/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt index 177c6b46b..9b6eb0435 100644 --- a/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt +++ b/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt @@ -6,84 +6,84 @@ import kotlin.contracts.contract /** * Represents a display of certain memory structure. */ -interface Memory { +public interface Memory { /** * The length of this memory in bytes. */ - val size: Int + public val size: Int /** * Get a projection of this memory (it reflects the changes in the parent memory block). */ - fun view(offset: Int, length: Int): Memory + public fun view(offset: Int, length: Int): Memory /** * Creates an independent copy of this memory. */ - fun copy(): Memory + public fun copy(): Memory /** * Gets or creates a reader of this memory. */ - fun reader(): MemoryReader + public fun reader(): MemoryReader /** * Gets or creates a writer of this memory. */ - fun writer(): MemoryWriter + public fun writer(): MemoryWriter - companion object + public companion object } /** * The interface to read primitive types in this memory. */ -interface MemoryReader { +public interface MemoryReader { /** * The underlying memory. */ - val memory: Memory + public val memory: Memory /** * Reads [Double] at certain [offset]. */ - fun readDouble(offset: Int): Double + public fun readDouble(offset: Int): Double /** * Reads [Float] at certain [offset]. */ - fun readFloat(offset: Int): Float + public fun readFloat(offset: Int): Float /** * Reads [Byte] at certain [offset]. */ - fun readByte(offset: Int): Byte + public fun readByte(offset: Int): Byte /** * Reads [Short] at certain [offset]. */ - fun readShort(offset: Int): Short + public fun readShort(offset: Int): Short /** * Reads [Int] at certain [offset]. */ - fun readInt(offset: Int): Int + public fun readInt(offset: Int): Int /** * Reads [Long] at certain [offset]. */ - fun readLong(offset: Int): Long + public fun readLong(offset: Int): Long /** * Disposes this reader if needed. */ - fun release() + public fun release() } /** * Uses the memory for read then releases the reader. */ -inline fun Memory.read(block: MemoryReader.() -> R): R { +public inline fun Memory.read(block: MemoryReader.() -> R): R { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } val reader = reader() val result = reader.block() @@ -94,52 +94,52 @@ inline fun Memory.read(block: MemoryReader.() -> R): R { /** * The interface to write primitive types into this memory. */ -interface MemoryWriter { +public interface MemoryWriter { /** * The underlying memory. */ - val memory: Memory + public val memory: Memory /** * Writes [Double] at certain [offset]. */ - fun writeDouble(offset: Int, value: Double) + public fun writeDouble(offset: Int, value: Double) /** * Writes [Float] at certain [offset]. */ - fun writeFloat(offset: Int, value: Float) + public fun writeFloat(offset: Int, value: Float) /** * Writes [Byte] at certain [offset]. */ - fun writeByte(offset: Int, value: Byte) + public fun writeByte(offset: Int, value: Byte) /** * Writes [Short] at certain [offset]. */ - fun writeShort(offset: Int, value: Short) + public fun writeShort(offset: Int, value: Short) /** * Writes [Int] at certain [offset]. */ - fun writeInt(offset: Int, value: Int) + public fun writeInt(offset: Int, value: Int) /** * Writes [Long] at certain [offset]. */ - fun writeLong(offset: Int, value: Long) + public fun writeLong(offset: Int, value: Long) /** * Disposes this writer if needed. */ - fun release() + public fun release() } /** * Uses the memory for write then releases the writer. */ -inline fun Memory.write(block: MemoryWriter.() -> Unit) { +public inline fun Memory.write(block: MemoryWriter.() -> Unit) { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } writer().apply(block).release() } @@ -147,10 +147,10 @@ inline fun Memory.write(block: MemoryWriter.() -> Unit) { /** * Allocates the most effective platform-specific memory. */ -expect fun Memory.Companion.allocate(length: Int): Memory +public expect fun Memory.Companion.allocate(length: Int): Memory /** * Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied * and could be mutated independently from the resulting [Memory]. */ -expect fun Memory.Companion.wrap(array: ByteArray): Memory +public expect fun Memory.Companion.wrap(array: ByteArray): Memory diff --git a/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt b/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt index 1381afbec..5bb163bc1 100644 --- a/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt +++ b/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt @@ -5,45 +5,45 @@ package scientifik.memory * * @param T the type of object this spec manages. */ -interface MemorySpec { +public interface MemorySpec { /** * Size of [T] in bytes after serialization. */ - val objectSize: Int + public val objectSize: Int /** * Reads the object starting from [offset]. */ - fun MemoryReader.read(offset: Int): T + public fun MemoryReader.read(offset: Int): T // TODO consider thread safety /** * Writes the object [value] starting from [offset]. */ - fun MemoryWriter.write(offset: Int, value: T) + public fun MemoryWriter.write(offset: Int, value: T) } /** * Reads the object with [spec] starting from [offset]. */ -fun MemoryReader.read(spec: MemorySpec, offset: Int): T = with(spec) { read(offset) } +public fun MemoryReader.read(spec: MemorySpec, offset: Int): T = with(spec) { read(offset) } /** * Writes the object [value] with [spec] starting from [offset]. */ -fun MemoryWriter.write(spec: MemorySpec, offset: Int, value: T): Unit = with(spec) { write(offset, value) } +public fun MemoryWriter.write(spec: MemorySpec, offset: Int, value: T): Unit = with(spec) { write(offset, value) } /** * Reads array of [size] objects mapped by [spec] at certain [offset]. */ -inline fun MemoryReader.readArray(spec: MemorySpec, offset: Int, size: Int): Array = +public inline fun MemoryReader.readArray(spec: MemorySpec, offset: Int, size: Int): Array = Array(size) { i -> with(spec) { read(offset + i * objectSize) } } /** * Writes [array] of objects mapped by [spec] at certain [offset]. */ -fun MemoryWriter.writeArray(spec: MemorySpec, offset: Int, array: Array): Unit = +public fun MemoryWriter.writeArray(spec: MemorySpec, offset: Int, array: Array): Unit = with(spec) { array.indices.forEach { i -> write(offset + i * objectSize, array[i]) } } // TODO It is possible to add elastic MemorySpec with unknown object size diff --git a/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt b/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt index 974750502..452ef1fea 100644 --- a/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt +++ b/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt @@ -83,7 +83,7 @@ private class DataViewMemory(val view: DataView) : Memory { /** * Allocates memory based on a [DataView]. */ -actual fun Memory.Companion.allocate(length: Int): Memory { +public actual fun Memory.Companion.allocate(length: Int): Memory { val buffer = ArrayBuffer(length) return DataViewMemory(DataView(buffer, 0, length)) } @@ -92,7 +92,7 @@ actual fun Memory.Companion.allocate(length: Int): Memory { * Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied * and could be mutated independently from the resulting [Memory]. */ -actual fun Memory.Companion.wrap(array: ByteArray): Memory { +public actual fun Memory.Companion.wrap(array: ByteArray): Memory { @Suppress("CAST_NEVER_SUCCEEDS") val int8Array = array as Int8Array return DataViewMemory(DataView(int8Array.buffer, int8Array.byteOffset, int8Array.length)) } diff --git a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt index f4967bf5c..e98340a44 100644 --- a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt +++ b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt @@ -94,14 +94,14 @@ internal class ByteBufferMemory( /** * Allocates memory based on a [ByteBuffer]. */ -actual fun Memory.Companion.allocate(length: Int): Memory = +public actual fun Memory.Companion.allocate(length: Int): Memory = ByteBufferMemory(checkNotNull(ByteBuffer.allocate(length))) /** * Wraps a [Memory] around existing [ByteArray]. This operation is unsafe since the array is not copied * and could be mutated independently from the resulting [Memory]. */ -actual fun Memory.Companion.wrap(array: ByteArray): Memory = ByteBufferMemory(checkNotNull(ByteBuffer.wrap(array))) +public actual fun Memory.Companion.wrap(array: ByteArray): Memory = ByteBufferMemory(checkNotNull(ByteBuffer.wrap(array))) /** * Wraps this [ByteBuffer] to [Memory] object. @@ -111,14 +111,14 @@ actual fun Memory.Companion.wrap(array: ByteArray): Memory = ByteBufferMemory(ch * @param size the size of memory to map. * @return the [Memory] object. */ -fun ByteBuffer.asMemory(startOffset: Int = 0, size: Int = limit()): Memory = +public fun ByteBuffer.asMemory(startOffset: Int = 0, size: Int = limit()): Memory = ByteBufferMemory(this, startOffset, size) /** * Uses direct memory-mapped buffer from file to read something and close it afterwards. */ @Throws(IOException::class) -inline fun Path.readAsMemory(position: Long = 0, size: Long = Files.size(this), block: Memory.() -> R): R { +public inline fun Path.readAsMemory(position: Long = 0, size: Long = Files.size(this), block: Memory.() -> R): R { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return FileChannel diff --git a/kmath-prob/build.gradle.kts b/kmath-prob/build.gradle.kts index a69d61b73..4c9663e5f 100644 --- a/kmath-prob/build.gradle.kts +++ b/kmath-prob/build.gradle.kts @@ -1,6 +1,4 @@ -plugins { - id("scientifik.mpp") -} +plugins { id("ru.mipt.npm.mpp") } kotlin.sourceSets { commonMain { @@ -8,10 +6,11 @@ kotlin.sourceSets { api(project(":kmath-coroutines")) } } - jvmMain{ - dependencies{ + + jvmMain { + dependencies { api("org.apache.commons:commons-rng-sampling:1.3") api("org.apache.commons:commons-rng-simple:1.3") } } -} \ No newline at end of file +} diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt index 412454994..ddb50ef42 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt +++ b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt @@ -11,7 +11,7 @@ import kotlin.math.exp import kotlin.math.pow import kotlin.math.sqrt -abstract class ContinuousSamplerDistribution : Distribution { +public abstract class ContinuousSamplerDistribution : Distribution { private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingRealChain() { private val sampler = buildCMSampler(generator) @@ -26,7 +26,7 @@ abstract class ContinuousSamplerDistribution : Distribution { override fun sample(generator: RandomGenerator): BlockingRealChain = ContinuousSamplerChain(generator) } -abstract class DiscreteSamplerDistribution : Distribution { +public abstract class DiscreteSamplerDistribution : Distribution { private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingIntChain() { private val sampler = buildSampler(generator) @@ -41,7 +41,7 @@ abstract class DiscreteSamplerDistribution : Distribution { override fun sample(generator: RandomGenerator): BlockingIntChain = ContinuousSamplerChain(generator) } -enum class NormalSamplerMethod { +public enum class NormalSamplerMethod { BoxMuller, Marsaglia, Ziggurat @@ -54,7 +54,7 @@ private fun normalSampler(method: NormalSamplerMethod, provider: UniformRandomPr NormalSamplerMethod.Ziggurat -> ZigguratNormalizedGaussianSampler(provider) } -fun Distribution.Companion.normal( +public fun Distribution.Companion.normal( method: NormalSamplerMethod = NormalSamplerMethod.Ziggurat ): Distribution = object : ContinuousSamplerDistribution() { override fun buildCMSampler(generator: RandomGenerator): ContinuousSampler { @@ -67,7 +67,7 @@ fun Distribution.Companion.normal( } } -fun Distribution.Companion.normal( +public fun Distribution.Companion.normal( mean: Double, sigma: Double, method: NormalSamplerMethod = NormalSamplerMethod.Ziggurat @@ -86,7 +86,7 @@ fun Distribution.Companion.normal( } } -fun Distribution.Companion.poisson( +public fun Distribution.Companion.poisson( lambda: Double ): DiscreteSamplerDistribution = object : DiscreteSamplerDistribution() { diff --git a/kmath-viktor/build.gradle.kts b/kmath-viktor/build.gradle.kts index 52ee7c497..6fe8ad878 100644 --- a/kmath-viktor/build.gradle.kts +++ b/kmath-viktor/build.gradle.kts @@ -1,10 +1,8 @@ -plugins { - id("scientifik.jvm") -} +plugins { id("ru.mipt.npm.jvm") } description = "Binding for https://github.com/JetBrains-Research/viktor" dependencies { api(project(":kmath-core")) api("org.jetbrains.bio:viktor:1.0.1") -} \ No newline at end of file +} diff --git a/settings.gradle.kts b/settings.gradle.kts index 487e1d87f..102cde93f 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -1,14 +1,12 @@ pluginManagement { - - val toolsVersion = "0.5.0" + val toolsVersion = "0.6.0-dev-3" plugins { - id("kotlinx.benchmark") version "0.2.0-dev-8" - id("scientifik.mpp") version toolsVersion - id("scientifik.jvm") version toolsVersion - id("scientifik.atomic") version toolsVersion - id("scientifik.publish") version toolsVersion - kotlin("plugin.allopen") version "1.3.72" + id("kotlinx.benchmark") version "0.2.0-dev-20" + id("ru.mipt.npm.mpp") version toolsVersion + id("ru.mipt.npm.jvm") version toolsVersion + id("ru.mipt.npm.publish") version toolsVersion + kotlin("plugin.allopen") version "1.4.0" } repositories { @@ -20,17 +18,10 @@ pluginManagement { maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlinx") } - - resolutionStrategy { - eachPlugin { - when (requested.id.id) { - "scientifik.mpp", "scientifik.jvm", "scientifik.publish" -> useModule("scientifik:gradle-tools:$toolsVersion") - } - } - } } rootProject.name = "kmath" + include( ":kmath-memory", ":kmath-core", From 6b79e79d218fb382b1f5b1fd6a7a8c740480394e Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Wed, 9 Sep 2020 09:55:26 +0700 Subject: [PATCH 03/26] Update tools and Kotlin, specify `public` explicitly, minor contracts refactor --- examples/build.gradle.kts | 10 +- .../kotlin/scientifik/kmath/ast/MstAlgebra.kt | 24 ++--- .../kmath/domains/HyperSquareDomain.kt | 27 +++--- .../kmath/domains/UnconstrainedDomain.kt | 16 ++-- .../kmath/domains/UnivariateDomain.kt | 20 ++-- .../FunctionalExpressionAlgebra.kt | 63 ++++++------- .../scientifik/kmath/linear/BufferMatrix.kt | 71 +++++++------- .../scientifik/kmath/linear/FeaturedMatrix.kt | 6 +- .../kmath/linear/LUPDecomposition.kt | 12 +-- .../scientifik/kmath/linear/LinearAlgebra.kt | 5 +- .../scientifik/kmath/misc/cumulative.kt | 7 +- .../scientifik/kmath/operations/Algebra.kt | 2 + .../scientifik/kmath/operations/BigInt.kt | 19 ++-- .../scientifik/kmath/operations/Complex.kt | 16 ++-- .../kmath/operations/NumberAlgebra.kt | 16 ++-- .../kmath/structures/BoxingNDRing.kt | 1 + .../kmath/structures/BufferedNDAlgebra.kt | 4 +- .../scientifik/kmath/structures/Buffers.kt | 29 +++--- .../kmath/structures/ComplexNDField.kt | 17 ++-- .../kmath/structures/FlaggedBuffer.kt | 18 ++-- .../kmath/structures/FloatBuffer.kt | 13 +-- .../scientifik/kmath/structures/IntBuffer.kt | 15 +-- .../scientifik/kmath/structures/LongBuffer.kt | 5 +- .../kmath/structures/MemoryBuffer.kt | 36 +++----- .../scientifik/kmath/structures/NDAlgebra.kt | 11 +-- .../scientifik/kmath/structures/NDElement.kt | 39 ++++---- .../kmath/structures/NDStructure.kt | 92 +++++++++---------- .../scientifik/kmath/structures/RealBuffer.kt | 16 +--- .../kmath/structures/RealBufferField.kt | 32 ++++--- .../kmath/structures/RealNDField.kt | 12 +-- .../kmath/structures/ShortBuffer.kt | 6 +- .../kmath/structures/ShortNDRing.kt | 8 +- .../kmath/structures/Structure1D.kt | 19 ++-- .../kmath/structures/Structure2D.kt | 12 +-- .../kmath/coroutines/coroutinesExtra.kt | 43 ++++----- .../kmath/structures/LazyNDStructure.kt | 39 ++++---- .../scientifik/kmath/dimensions/Wrappers.kt | 67 +++++++------- .../scientifik/kmath/real/realMatrix.kt | 7 +- .../scientifik/kmath/functions/Piecewise.kt | 18 ++-- .../scientifik/kmath/functions/Polynomial.kt | 6 +- .../kmath/interpolation/Interpolator.kt | 8 +- .../kmath/interpolation/LinearInterpolator.kt | 4 +- .../kmath/interpolation/SplineInterpolator.kt | 7 +- .../kmath/interpolation/XYPointSet.kt | 28 +++--- .../interpolation/LinearInterpolatorTest.kt | 4 +- .../scientifik/kmath/viktor/ViktorBuffer.kt | 15 ++- settings.gradle.kts | 5 +- 47 files changed, 422 insertions(+), 528 deletions(-) diff --git a/examples/build.gradle.kts b/examples/build.gradle.kts index 9fd90d08b..9f173a046 100644 --- a/examples/build.gradle.kts +++ b/examples/build.gradle.kts @@ -3,7 +3,7 @@ import org.jetbrains.kotlin.gradle.tasks.KotlinCompile plugins { java kotlin("jvm") - kotlin("plugin.allopen") version "1.4.0" + kotlin("plugin.allopen") version "1.4.20-dev-3898-14" id("kotlinx.benchmark") version "0.2.0-dev-20" } @@ -13,6 +13,7 @@ repositories { maven("http://dl.bintray.com/kyonifer/maven") maven("https://dl.bintray.com/mipt-npm/scientifik") maven("https://dl.bintray.com/mipt-npm/dev") + maven("https://dl.bintray.com/kotlin/kotlin-dev/") mavenCentral() } @@ -55,9 +56,4 @@ kotlin.sourceSets.all { } } -tasks.withType { - kotlinOptions { - jvmTarget = "11" - freeCompilerArgs = freeCompilerArgs + "-Xopt-in=kotlin.RequiresOptIn" - } -} +tasks.withType { kotlinOptions.jvmTarget = "11" } diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt index e4480e608..7d13a2b25 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt @@ -37,7 +37,7 @@ public object MstSpace : Space, NumericAlgebra { /** * [Ring] over [MST] nodes. */ -object MstRing : Ring, NumericAlgebra { +public object MstRing : Ring, NumericAlgebra { override val zero: MST = number(0.0) override val one: MST = number(1.0) @@ -58,18 +58,18 @@ object MstRing : Ring, NumericAlgebra { /** * [Field] over [MST] nodes. */ -object MstField : Field { - override val zero: MST = number(0.0) - override val one: MST = number(1.0) +public object MstField : Field { + public override val zero: MST = number(0.0) + public override val one: MST = number(1.0) - override fun symbol(value: String): MST = MstRing.symbol(value) - override fun number(value: Number): MST = MstRing.number(value) - override fun add(a: MST, b: MST): MST = MstRing.add(a, b) - override fun multiply(a: MST, k: Number): MST = MstRing.multiply(a, k) - override fun multiply(a: MST, b: MST): MST = MstRing.multiply(a, b) - override fun divide(a: MST, b: MST): MST = binaryOperation(FieldOperations.DIV_OPERATION, a, b) + public override fun symbol(value: String): MST = MstRing.symbol(value) + public override fun number(value: Number): MST = MstRing.number(value) + public override fun add(a: MST, b: MST): MST = MstRing.add(a, b) + public override fun multiply(a: MST, k: Number): MST = MstRing.multiply(a, k) + public override fun multiply(a: MST, b: MST): MST = MstRing.multiply(a, b) + public override fun divide(a: MST, b: MST): MST = binaryOperation(FieldOperations.DIV_OPERATION, a, b) - override fun binaryOperation(operation: String, left: MST, right: MST): MST = + public override fun binaryOperation(operation: String, left: MST, right: MST): MST = MstRing.binaryOperation(operation, left, right) override fun unaryOperation(operation: String, arg: MST): MST = MstRing.unaryOperation(operation, arg) @@ -78,7 +78,7 @@ object MstField : Field { /** * [ExtendedField] over [MST] nodes. */ -object MstExtendedField : ExtendedField { +public object MstExtendedField : ExtendedField { override val zero: MST = number(0.0) override val one: MST = number(1.0) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt index e118282bf..61d443ff3 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt @@ -26,22 +26,21 @@ import scientifik.kmath.structures.indices * @author Alexander Nozik */ public class HyperSquareDomain(private val lower: RealBuffer, private val upper: RealBuffer) : RealDomain { + public override val dimension: Int get() = lower.size - override operator fun contains(point: Point): Boolean = point.indices.all { i -> + public override operator fun contains(point: Point): Boolean = point.indices.all { i -> point[i] in lower[i]..upper[i] } - override val dimension: Int get() = lower.size + public override fun getLowerBound(num: Int, point: Point): Double? = lower[num] - override fun getLowerBound(num: Int, point: Point): Double? = lower[num] + public override fun getLowerBound(num: Int): Double? = lower[num] - override fun getLowerBound(num: Int): Double? = lower[num] + public override fun getUpperBound(num: Int, point: Point): Double? = upper[num] - override fun getUpperBound(num: Int, point: Point): Double? = upper[num] + public override fun getUpperBound(num: Int): Double? = upper[num] - override fun getUpperBound(num: Int): Double? = upper[num] - - override fun nearestInDomain(point: Point): Point { + public override fun nearestInDomain(point: Point): Point { val res = DoubleArray(point.size) { i -> when { point[i] < lower[i] -> lower[i] @@ -53,16 +52,14 @@ public class HyperSquareDomain(private val lower: RealBuffer, private val upper: return RealBuffer(*res) } - override fun volume(): Double { + public override fun volume(): Double { var res = 1.0 + for (i in 0 until dimension) { - if (lower[i].isInfinite() || upper[i].isInfinite()) { - return Double.POSITIVE_INFINITY - } - if (upper[i] > lower[i]) { - res *= upper[i] - lower[i] - } + if (lower[i].isInfinite() || upper[i].isInfinite()) return Double.POSITIVE_INFINITY + if (upper[i] > lower[i]) res *= upper[i] - lower[i] } + return res } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt index 5c9170663..c637795df 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt @@ -17,18 +17,18 @@ package scientifik.kmath.domains import scientifik.kmath.linear.Point -public class UnconstrainedDomain(override val dimension: Int) : RealDomain { - override operator fun contains(point: Point): Boolean = true +public class UnconstrainedDomain(public override val dimension: Int) : RealDomain { + public override operator fun contains(point: Point): Boolean = true - override fun getLowerBound(num: Int, point: Point): Double? = Double.NEGATIVE_INFINITY + public override fun getLowerBound(num: Int, point: Point): Double? = Double.NEGATIVE_INFINITY - override fun getLowerBound(num: Int): Double? = Double.NEGATIVE_INFINITY + public override fun getLowerBound(num: Int): Double? = Double.NEGATIVE_INFINITY - override fun getUpperBound(num: Int, point: Point): Double? = Double.POSITIVE_INFINITY + public override fun getUpperBound(num: Int, point: Point): Double? = Double.POSITIVE_INFINITY - override fun getUpperBound(num: Int): Double? = Double.POSITIVE_INFINITY + public override fun getUpperBound(num: Int): Double? = Double.POSITIVE_INFINITY - override fun nearestInDomain(point: Point): Point = point + public override fun nearestInDomain(point: Point): Point = point - override fun volume(): Double = Double.POSITIVE_INFINITY + public override fun volume(): Double = Double.POSITIVE_INFINITY } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt index 5b47476d8..066a8ae25 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt @@ -4,16 +4,20 @@ import scientifik.kmath.linear.Point import scientifik.kmath.structures.asBuffer public inline class UnivariateDomain(public val range: ClosedFloatingPointRange) : RealDomain { + public override val dimension: Int + get() = 1 + public operator fun contains(d: Double): Boolean = range.contains(d) - override operator fun contains(point: Point): Boolean { + public override operator fun contains(point: Point): Boolean { require(point.size == 0) return contains(point[0]) } - override fun nearestInDomain(point: Point): Point { + public override fun nearestInDomain(point: Point): Point { require(point.size == 1) val value = point[0] + return when { value in range -> point value >= range.endInclusive -> doubleArrayOf(range.endInclusive).asBuffer() @@ -21,27 +25,25 @@ public inline class UnivariateDomain(public val range: ClosedFloatingPointRange< } } - override fun getLowerBound(num: Int, point: Point): Double? { + public override fun getLowerBound(num: Int, point: Point): Double? { require(num == 0) return range.start } - override fun getUpperBound(num: Int, point: Point): Double? { + public override fun getUpperBound(num: Int, point: Point): Double? { require(num == 0) return range.endInclusive } - override fun getLowerBound(num: Int): Double? { + public override fun getLowerBound(num: Int): Double? { require(num == 0) return range.start } - override fun getUpperBound(num: Int): Double? { + public override fun getUpperBound(num: Int): Double? { require(num == 0) return range.endInclusive } - override fun volume(): Double = range.endInclusive - range.start - - override val dimension: Int get() = 1 + public override fun volume(): Double = range.endInclusive - range.start } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt index 58f874671..3804819e6 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt @@ -4,7 +4,8 @@ import scientifik.kmath.operations.* internal class FunctionalUnaryOperation(val context: Algebra, val name: String, private val expr: Expression) : Expression { - override operator fun invoke(arguments: Map): T = context.unaryOperation(name, expr.invoke(arguments)) + public override operator fun invoke(arguments: Map): T = + context.unaryOperation(name, expr.invoke(arguments)) } internal class FunctionalBinaryOperation( @@ -13,17 +14,17 @@ internal class FunctionalBinaryOperation( val first: Expression, val second: Expression ) : Expression { - override operator fun invoke(arguments: Map): T = + public override operator fun invoke(arguments: Map): T = context.binaryOperation(name, first.invoke(arguments), second.invoke(arguments)) } internal class FunctionalVariableExpression(val name: String, val default: T? = null) : Expression { - override operator fun invoke(arguments: Map): T = + public override operator fun invoke(arguments: Map): T = arguments[name] ?: default ?: error("Parameter not found: $name") } internal class FunctionalConstantExpression(val value: T) : Expression { - override operator fun invoke(arguments: Map): T = value + public override operator fun invoke(arguments: Map): T = value } internal class FunctionalConstProductExpression( @@ -31,7 +32,7 @@ internal class FunctionalConstProductExpression( private val expr: Expression, val const: Number ) : Expression { - override operator fun invoke(arguments: Map): T = context.multiply(expr.invoke(arguments), const) + public override operator fun invoke(arguments: Map): T = context.multiply(expr.invoke(arguments), const) } /** @@ -44,23 +45,23 @@ public abstract class FunctionalExpressionAlgebra>(public val /** * Builds an Expression of constant expression which does not depend on arguments. */ - override fun const(value: T): Expression = FunctionalConstantExpression(value) + public override fun const(value: T): Expression = FunctionalConstantExpression(value) /** * Builds an Expression to access a variable. */ - override fun variable(name: String, default: T?): Expression = FunctionalVariableExpression(name, default) + public override fun variable(name: String, default: T?): Expression = FunctionalVariableExpression(name, default) /** * Builds an Expression of dynamic call of binary operation [operation] on [left] and [right]. */ - override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = + public override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = FunctionalBinaryOperation(algebra, operation, left, right) /** * Builds an Expression of dynamic call of unary operation with name [operation] on [arg]. */ - override fun unaryOperation(operation: String, arg: Expression): Expression = + public override fun unaryOperation(operation: String, arg: Expression): Expression = FunctionalUnaryOperation(algebra, operation, arg) } @@ -69,18 +70,18 @@ public abstract class FunctionalExpressionAlgebra>(public val */ public open class FunctionalExpressionSpace>(algebra: A) : FunctionalExpressionAlgebra(algebra), Space> { - override val zero: Expression get() = const(algebra.zero) + public override val zero: Expression get() = const(algebra.zero) /** * Builds an Expression of addition of two another expressions. */ - override fun add(a: Expression, b: Expression): Expression = + public override fun add(a: Expression, b: Expression): Expression = binaryOperation(SpaceOperations.PLUS_OPERATION, a, b) /** * Builds an Expression of multiplication of expression by number. */ - override fun multiply(a: Expression, k: Number): Expression = + public override fun multiply(a: Expression, k: Number): Expression = FunctionalConstProductExpression(algebra, a, k) public operator fun Expression.plus(arg: T): Expression = this + const(arg) @@ -88,31 +89,31 @@ public open class FunctionalExpressionSpace>(algebra: A) : public operator fun T.plus(arg: Expression): Expression = arg + this public operator fun T.minus(arg: Expression): Expression = arg - this - override fun unaryOperation(operation: String, arg: Expression): Expression = + public override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) - override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = + public override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = super.binaryOperation(operation, left, right) } public open class FunctionalExpressionRing(algebra: A) : FunctionalExpressionSpace(algebra), Ring> where A : Ring, A : NumericAlgebra { - override val one: Expression + public override val one: Expression get() = const(algebra.one) /** * Builds an Expression of multiplication of two expressions. */ - override fun multiply(a: Expression, b: Expression): Expression = + public override fun multiply(a: Expression, b: Expression): Expression = binaryOperation(RingOperations.TIMES_OPERATION, a, b) public operator fun Expression.times(arg: T): Expression = this * const(arg) public operator fun T.times(arg: Expression): Expression = arg * this - override fun unaryOperation(operation: String, arg: Expression): Expression = + public override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) - override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = + public override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = super.binaryOperation(operation, left, right) } @@ -122,38 +123,38 @@ public open class FunctionalExpressionField(algebra: A) : /** * Builds an Expression of division an expression by another one. */ - override fun divide(a: Expression, b: Expression): Expression = + public override fun divide(a: Expression, b: Expression): Expression = binaryOperation(FieldOperations.DIV_OPERATION, a, b) public operator fun Expression.div(arg: T): Expression = this / const(arg) public operator fun T.div(arg: Expression): Expression = arg / this - override fun unaryOperation(operation: String, arg: Expression): Expression = + public override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) - override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = + public override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = super.binaryOperation(operation, left, right) } public open class FunctionalExpressionExtendedField(algebra: A) : FunctionalExpressionField(algebra), ExtendedField> where A : ExtendedField, A : NumericAlgebra { - override fun sin(arg: Expression): Expression = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg) - override fun cos(arg: Expression): Expression = unaryOperation(TrigonometricOperations.COS_OPERATION, arg) - override fun asin(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ASIN_OPERATION, arg) - override fun acos(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ACOS_OPERATION, arg) - override fun atan(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ATAN_OPERATION, arg) + public override fun sin(arg: Expression): Expression = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg) + public override fun cos(arg: Expression): Expression = unaryOperation(TrigonometricOperations.COS_OPERATION, arg) + public override fun asin(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ASIN_OPERATION, arg) + public override fun acos(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ACOS_OPERATION, arg) + public override fun atan(arg: Expression): Expression = unaryOperation(TrigonometricOperations.ATAN_OPERATION, arg) - override fun power(arg: Expression, pow: Number): Expression = + public override fun power(arg: Expression, pow: Number): Expression = binaryOperation(PowerOperations.POW_OPERATION, arg, number(pow)) - override fun exp(arg: Expression): Expression = unaryOperation(ExponentialOperations.EXP_OPERATION, arg) - override fun ln(arg: Expression): Expression = unaryOperation(ExponentialOperations.LN_OPERATION, arg) + public override fun exp(arg: Expression): Expression = unaryOperation(ExponentialOperations.EXP_OPERATION, arg) + public override fun ln(arg: Expression): Expression = unaryOperation(ExponentialOperations.LN_OPERATION, arg) - override fun unaryOperation(operation: String, arg: Expression): Expression = + public override fun unaryOperation(operation: String, arg: Expression): Expression = super.unaryOperation(operation, arg) - override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = + public override fun binaryOperation(operation: String, left: Expression, right: Expression): Expression = super.binaryOperation(operation, left, right) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt index c28cc5ab7..d053f016c 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt @@ -8,82 +8,82 @@ import scientifik.kmath.structures.* * Basic implementation of Matrix space based on [NDStructure] */ public class BufferMatrixContext>( - override val elementContext: R, + public override val elementContext: R, private val bufferFactory: BufferFactory ) : GenericMatrixContext { - - override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): BufferMatrix { + public override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): BufferMatrix { val buffer = bufferFactory(rows * columns) { offset -> initializer(offset / columns, offset % columns) } return BufferMatrix(rows, columns, buffer) } - override fun point(size: Int, initializer: (Int) -> T): Point = bufferFactory(size, initializer) + public override fun point(size: Int, initializer: (Int) -> T): Point = bufferFactory(size, initializer) public companion object } @Suppress("OVERRIDE_BY_INLINE") public object RealMatrixContext : GenericMatrixContext { + public override val elementContext: RealField + get() = RealField - override val elementContext: RealField get() = RealField - - override inline fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> Double): Matrix { + public override inline fun produce( + rows: Int, + columns: Int, + initializer: (i: Int, j: Int) -> Double + ): Matrix { val buffer = RealBuffer(rows * columns) { offset -> initializer(offset / columns, offset % columns) } return BufferMatrix(rows, columns, buffer) } - override inline fun point(size: Int, initializer: (Int) -> Double): Point = RealBuffer(size, initializer) + public override inline fun point(size: Int, initializer: (Int) -> Double): Point = + RealBuffer(size, initializer) } public class BufferMatrix( - override val rowNum: Int, - override val colNum: Int, + public override val rowNum: Int, + public override val colNum: Int, public val buffer: Buffer, - override val features: Set = emptySet() + public override val features: Set = emptySet() ) : FeaturedMatrix { + override val shape: IntArray + get() = intArrayOf(rowNum, colNum) init { - if (buffer.size != rowNum * colNum) { - error("Dimension mismatch for matrix structure") - } + require(buffer.size == rowNum * colNum) { "Dimension mismatch for matrix structure" } } - override val shape: IntArray get() = intArrayOf(rowNum, colNum) - - override fun suggestFeature(vararg features: MatrixFeature): BufferMatrix = + public override fun suggestFeature(vararg features: MatrixFeature): BufferMatrix = BufferMatrix(rowNum, colNum, buffer, this.features + features) - override operator fun get(index: IntArray): T = get(index[0], index[1]) + public override operator fun get(index: IntArray): T = get(index[0], index[1]) + public override operator fun get(i: Int, j: Int): T = buffer[i * colNum + j] - override operator fun get(i: Int, j: Int): T = buffer[i * colNum + j] - - override fun elements(): Sequence> = sequence { + public override fun elements(): Sequence> = sequence { for (i in 0 until rowNum) for (j in 0 until colNum) yield(intArrayOf(i, j) to get(i, j)) } - override fun equals(other: Any?): Boolean { + public override fun equals(other: Any?): Boolean { if (this === other) return true + return when (other) { is NDStructure<*> -> return NDStructure.equals(this, other) else -> false } } - override fun hashCode(): Int { + public override fun hashCode(): Int { var result = buffer.hashCode() result = 31 * result + features.hashCode() return result } - override fun toString(): String { - return if (rowNum <= 5 && colNum <= 5) { + public override fun toString(): String { + return if (rowNum <= 5 && colNum <= 5) "Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)\n" + rows.asSequence().joinToString(prefix = "(", postfix = ")", separator = "\n ") { buffer -> buffer.asSequence().joinToString(separator = "\t") { it.toString() } } - } else { - "Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)" - } + else "Matrix(rowsNum = $rowNum, colNum = $colNum, features=$features)" } } @@ -92,26 +92,21 @@ public class BufferMatrix( */ public infix fun BufferMatrix.dot(other: BufferMatrix): BufferMatrix { require(colNum == other.rowNum) { "Matrix dot operation dimension mismatch: ($rowNum, $colNum) x (${other.rowNum}, ${other.colNum})" } - val array = DoubleArray(this.rowNum * other.colNum) //convert to array to insure there is not memory indirection - fun Buffer.unsafeArray(): DoubleArray = if (this is RealBuffer) { + fun Buffer.unsafeArray() = if (this is RealBuffer) array - } else { + else DoubleArray(size) { get(it) } - } val a = this.buffer.unsafeArray() val b = other.buffer.unsafeArray() - for (i in (0 until rowNum)) { - for (j in (0 until other.colNum)) { - for (k in (0 until colNum)) { + for (i in (0 until rowNum)) + for (j in (0 until other.colNum)) + for (k in (0 until colNum)) array[i * other.colNum + j] += a[i * colNum + k] * b[k * other.colNum + j] - } - } - } val buffer = RealBuffer(array) return BufferMatrix(rowNum, other.colNum, buffer) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt index 3e5116435..2cd507078 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt @@ -26,10 +26,8 @@ public interface FeaturedMatrix : Matrix { public companion object } -public inline fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double): Matrix { - contract { callsInPlace(initializer) } - return MatrixContext.real.produce(rows, columns, initializer) -} +public inline fun Structure2D.Companion.real(rows: Int, columns: Int, initializer: (Int, Int) -> Double): Matrix = + MatrixContext.real.produce(rows, columns, initializer) /** * Build a square matrix from given elements. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt index 2bad1aa46..ab23afff0 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt @@ -76,7 +76,6 @@ public inline fun , F : Field> GenericMatrixContext.l matrix: Matrix, checkSingular: (T) -> Boolean ): LUPDecomposition { - contract { callsInPlace(checkSingular) } require(matrix.rowNum == matrix.colNum) { "LU decomposition supports only square matrices" } val m = matrix.colNum val pivot = IntArray(matrix.rowNum) @@ -153,10 +152,7 @@ public inline fun , F : Field> GenericMatrixContext.l public inline fun , F : Field> GenericMatrixContext.lup( matrix: Matrix, checkSingular: (T) -> Boolean -): LUPDecomposition { - contract { callsInPlace(checkSingular) } - return lup(T::class, matrix, checkSingular) -} +): LUPDecomposition = lup(T::class, matrix, checkSingular) public fun GenericMatrixContext.lup(matrix: Matrix): LUPDecomposition = lup(Double::class, matrix) { it < 1e-11 } @@ -216,7 +212,6 @@ public inline fun , F : Field> GenericMatrixContext b: Matrix, checkSingular: (T) -> Boolean ): Matrix { - contract { callsInPlace(checkSingular) } // Use existing decomposition if it is provided by matrix val decomposition = a.getFeature() ?: lup(T::class, a, checkSingular) return decomposition.solve(T::class, b) @@ -227,10 +222,7 @@ public fun RealMatrixContext.solve(a: Matrix, b: Matrix): Matrix public inline fun , F : Field> GenericMatrixContext.inverse( matrix: Matrix, checkSingular: (T) -> Boolean -): Matrix { - contract { callsInPlace(checkSingular) } - return solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular) -} +): Matrix = solve(matrix, one(matrix.rowNum, matrix.colNum), checkSingular) public fun RealMatrixContext.inverse(matrix: Matrix): Matrix = solve(matrix, one(matrix.rowNum, matrix.colNum)) { it < 1e-11 } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt index 4daa03e5d..607d63bb1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt @@ -19,10 +19,9 @@ public interface LinearSolver { * Convert matrix to vector if it is possible */ public fun Matrix.asPoint(): Point = - if (this.colNum == 1) { + if (this.colNum == 1) VirtualBuffer(rowNum) { get(it, 0) } - } else { + else error("Can't convert matrix with more than one column to vector") - } public fun Point.asMatrix(): VirtualMatrix = VirtualMatrix(size, 1) { i, _ -> get(i) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt index f7dfcd781..1712fef58 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt @@ -12,10 +12,8 @@ import kotlin.jvm.JvmName * @param R the type of resulting iterable. * @param initial lazy evaluated. */ -public inline fun Iterator.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterator { - contract { callsInPlace(operation) } - - return object : Iterator { +public inline fun Iterator.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterator = + object : Iterator { var state: R = initial override fun hasNext(): Boolean = this@cumulative.hasNext() @@ -25,7 +23,6 @@ public inline fun Iterator.cumulative(initial: R, crossinline operatio return state } } -} public inline fun Iterable.cumulative(initial: R, crossinline operation: (R, T) -> R): Iterable = Iterable { this@cumulative.iterator().cumulative(initial, operation) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt index 40f974096..1ea105f67 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt @@ -1,5 +1,7 @@ package scientifik.kmath.operations +import kotlin.contracts.contract + /** * Stub for DSL the [Algebra] is. */ diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt index 56ec84f0b..cbee88e38 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt @@ -40,18 +40,17 @@ public class BigInt internal constructor( private val sign: Byte, private val magnitude: Magnitude ) : Comparable { - - override fun compareTo(other: BigInt): Int = when { + public override fun compareTo(other: BigInt): Int = when { (this.sign == 0.toByte()) and (other.sign == 0.toByte()) -> 0 this.sign < other.sign -> -1 this.sign > other.sign -> 1 else -> this.sign * compareMagnitudes(this.magnitude, other.magnitude) } - override fun equals(other: Any?): Boolean = + public override fun equals(other: Any?): Boolean = if (other is BigInt) compareTo(other) == 0 else error("Can't compare KBigInteger to a different type") - override fun hashCode(): Int = magnitude.hashCode() + sign + public override fun hashCode(): Int = magnitude.hashCode() + sign public fun abs(): BigInt = if (sign == 0.toByte()) this else BigInt(1, magnitude) @@ -456,15 +455,11 @@ public fun String.parseBigInteger(): BigInt? { return res * sign } -public inline fun Buffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): Buffer { - contract { callsInPlace(initializer) } - return boxing(size, initializer) -} +public inline fun Buffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): Buffer = + boxing(size, initializer) -public inline fun MutableBuffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): MutableBuffer { - contract { callsInPlace(initializer) } - return boxing(size, initializer) -} +public inline fun MutableBuffer.Companion.bigInt(size: Int, initializer: (Int) -> BigInt): MutableBuffer = + boxing(size, initializer) public fun NDAlgebra.Companion.bigInt(vararg shape: Int): BoxingNDRing = BoxingNDRing(shape, BigIntField, Buffer.Companion::bigInt) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt index facc2ad26..20decf0e0 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt @@ -6,7 +6,6 @@ import scientifik.kmath.structures.MutableBuffer import scientifik.memory.MemoryReader import scientifik.memory.MemorySpec import scientifik.memory.MemoryWriter -import kotlin.contracts.contract import kotlin.math.* /** @@ -165,7 +164,8 @@ public object ComplexField : ExtendedField, Norm { * @property re The real part. * @property im The imaginary part. */ -public data class Complex(val re: Double, val im: Double) : FieldElement, Comparable { +public data class Complex(val re: Double, val im: Double) : FieldElement, + Comparable { public constructor(re: Number, im: Number) : this(re.toDouble(), im.toDouble()) override val context: ComplexField get() = ComplexField @@ -197,12 +197,8 @@ public data class Complex(val re: Double, val im: Double) : FieldElement Complex): Buffer { - contract { callsInPlace(init) } - return MemoryBuffer.create(Complex, size, init) -} +public inline fun Buffer.Companion.complex(size: Int, init: (Int) -> Complex): Buffer = + MemoryBuffer.create(Complex, size, init) -public inline fun MutableBuffer.Companion.complex(size: Int, crossinline init: (Int) -> Complex): Buffer { - contract { callsInPlace(init) } - return MemoryBuffer.create(Complex, size, init) -} +public inline fun MutableBuffer.Companion.complex(size: Int, init: (Int) -> Complex): Buffer = + MemoryBuffer.create(Complex, size, init) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt index 54460a0da..052e32bb9 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt @@ -62,7 +62,7 @@ public interface ExtendedField : ExtendedFieldOperations, Field { * * TODO inline does not work due to compiler bug. Waiting for fix for KT-27586 */ -inline class Real(val value: Double) : FieldElement { +public inline class Real(public val value: Double) : FieldElement { override val context: RealField get() = RealField @@ -70,14 +70,14 @@ inline class Real(val value: Double) : FieldElement { override fun Double.wrap(): Real = Real(value) - companion object + public companion object } /** * A field for [Double] without boxing. Does not produce appropriate field element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object RealField : ExtendedField, Norm { +public object RealField : ExtendedField, Norm { override val zero: Double get() = 0.0 @@ -127,7 +127,7 @@ object RealField : ExtendedField, Norm { * A field for [Float] without boxing. Does not produce appropriate field element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object FloatField : ExtendedField, Norm { +public object FloatField : ExtendedField, Norm { override val zero: Float get() = 0.0f @@ -177,7 +177,7 @@ object FloatField : ExtendedField, Norm { * A field for [Int] without boxing. Does not produce corresponding ring element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object IntRing : Ring, Norm { +public object IntRing : Ring, Norm { override val zero: Int get() = 0 @@ -201,7 +201,7 @@ object IntRing : Ring, Norm { * A field for [Short] without boxing. Does not produce appropriate ring element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object ShortRing : Ring, Norm { +public object ShortRing : Ring, Norm { override val zero: Short get() = 0 @@ -225,7 +225,7 @@ object ShortRing : Ring, Norm { * A field for [Byte] without boxing. Does not produce appropriate ring element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object ByteRing : Ring, Norm { +public object ByteRing : Ring, Norm { override val zero: Byte get() = 0 @@ -249,7 +249,7 @@ object ByteRing : Ring, Norm { * A field for [Double] without boxing. Does not produce appropriate ring element. */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -object LongRing : Ring, Norm { +public object LongRing : Ring, Norm { override val zero: Long get() = 0 diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt index 9e44e38aa..de83768a0 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt @@ -59,6 +59,7 @@ public class BoxingNDRing>( transform: R.(T, T) -> T ): BufferedNDRingElement { check(a, b) + return BufferedNDRingElement( this, buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) }) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt index ac8ca0db4..4b1a67805 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt @@ -5,7 +5,7 @@ import scientifik.kmath.operations.* public interface BufferedNDAlgebra : NDAlgebra> { public val strides: Strides - override fun check(vararg elements: NDBuffer): Unit = + public override fun check(vararg elements: NDBuffer): Unit = require(elements.all { it.strides == strides }) { ("Strides mismatch") } /** @@ -29,7 +29,7 @@ public interface BufferedNDAlgebra : NDAlgebra> { public interface BufferedNDSpace> : NDSpace>, BufferedNDAlgebra { - override fun NDBuffer.toElement(): SpaceElement, *, out BufferedNDSpace> + public override fun NDBuffer.toElement(): SpaceElement, *, out BufferedNDSpace> } public interface BufferedNDRing> : NDRing>, BufferedNDSpace { diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt index 48d15d50a..d44100037 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt @@ -2,8 +2,6 @@ package scientifik.kmath.structures import scientifik.kmath.operations.Complex import scientifik.kmath.operations.complex -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.contract import kotlin.reflect.KClass /** @@ -56,7 +54,8 @@ public interface Buffer { /** * Create a boxing buffer of given type */ - public inline fun boxing(size: Int, initializer: (Int) -> T): Buffer = ListBuffer(List(size, initializer)) + public inline fun boxing(size: Int, initializer: (Int) -> T): Buffer = + ListBuffer(List(size, initializer)) @Suppress("UNCHECKED_CAST") public inline fun auto(type: KClass, size: Int, crossinline initializer: (Int) -> T): Buffer { @@ -115,11 +114,11 @@ public interface MutableBuffer : Buffer { /** * Create a boxing mutable buffer of given type */ - inline fun boxing(size: Int, initializer: (Int) -> T): MutableBuffer = + public inline fun boxing(size: Int, initializer: (Int) -> T): MutableBuffer = MutableListBuffer(MutableList(size, initializer)) @Suppress("UNCHECKED_CAST") - inline fun auto(type: KClass, size: Int, initializer: (Int) -> T): MutableBuffer = + public inline fun auto(type: KClass, size: Int, initializer: (Int) -> T): MutableBuffer = when (type) { Double::class -> RealBuffer(DoubleArray(size) { initializer(it) as Double }) as MutableBuffer Short::class -> ShortBuffer(ShortArray(size) { initializer(it) as Short }) as MutableBuffer @@ -132,12 +131,11 @@ public interface MutableBuffer : Buffer { * Create most appropriate mutable buffer for given type avoiding boxing wherever possible */ @Suppress("UNCHECKED_CAST") - inline fun auto(size: Int, initializer: (Int) -> T): MutableBuffer = + public inline fun auto(size: Int, initializer: (Int) -> T): MutableBuffer = auto(T::class, size, initializer) - val real: MutableBufferFactory = { size: Int, initializer: (Int) -> Double -> - RealBuffer(DoubleArray(size) { initializer(it) }) - } + public val real: MutableBufferFactory = + { size, initializer -> RealBuffer(DoubleArray(size) { initializer(it) }) } } } @@ -147,7 +145,7 @@ public interface MutableBuffer : Buffer { * @param T the type of elements contained in the buffer. * @property list The underlying list. */ -inline class ListBuffer(val list: List) : Buffer { +public inline class ListBuffer(public val list: List) : Buffer { override val size: Int get() = list.size @@ -158,7 +156,7 @@ inline class ListBuffer(val list: List) : Buffer { /** * Returns an [ListBuffer] that wraps the original list. */ -fun List.asBuffer(): ListBuffer = ListBuffer(this) +public fun List.asBuffer(): ListBuffer = ListBuffer(this) /** * Creates a new [ListBuffer] with the specified [size], where each element is calculated by calling the specified @@ -167,10 +165,7 @@ fun List.asBuffer(): ListBuffer = ListBuffer(this) * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an array element given its index. */ -inline fun ListBuffer(size: Int, init: (Int) -> T): ListBuffer { - contract { callsInPlace(init) } - return List(size, init).asBuffer() -} +public inline fun ListBuffer(size: Int, init: (Int) -> T): ListBuffer = List(size, init).asBuffer() /** * [MutableBuffer] implementation over [MutableList]. @@ -178,7 +173,7 @@ inline fun ListBuffer(size: Int, init: (Int) -> T): ListBuffer { * @param T the type of elements contained in the buffer. * @property list The underlying list. */ -inline class MutableListBuffer(val list: MutableList) : MutableBuffer { +public inline class MutableListBuffer(public val list: MutableList) : MutableBuffer { override val size: Int get() = list.size @@ -198,7 +193,7 @@ inline class MutableListBuffer(val list: MutableList) : MutableBuffer { * @param T the type of elements contained in the buffer. * @property array The underlying array. */ -class ArrayBuffer(private val array: Array) : MutableBuffer { +public class ArrayBuffer(private val array: Array) : MutableBuffer { // Can't inline because array is invariant override val size: Int get() = array.size diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt index 56fe2a5ac..87dd11f59 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt @@ -4,7 +4,6 @@ import scientifik.kmath.operations.Complex import scientifik.kmath.operations.ComplexField import scientifik.kmath.operations.FieldElement import scientifik.kmath.operations.complex -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract @@ -98,7 +97,7 @@ public class ComplexNDField(override val shape: IntArray) : /** * Fast element production using function inlining */ -inline fun BufferedNDField.produceInline(crossinline initializer: ComplexField.(Int) -> Complex): ComplexNDElement { +public inline fun BufferedNDField.produceInline(initializer: ComplexField.(Int) -> Complex): ComplexNDElement { val buffer = Buffer.complex(strides.linearSize) { offset -> ComplexField.initializer(offset) } return BufferedNDFieldElement(this, buffer) } @@ -106,14 +105,13 @@ inline fun BufferedNDField.produceInline(crossinline init /** * Map one [ComplexNDElement] using function with indices. */ -inline fun ComplexNDElement.mapIndexed(crossinline transform: ComplexField.(index: IntArray, Complex) -> Complex): ComplexNDElement = +public inline fun ComplexNDElement.mapIndexed(transform: ComplexField.(index: IntArray, Complex) -> Complex): ComplexNDElement = context.produceInline { offset -> transform(strides.index(offset), buffer[offset]) } /** * Map one [ComplexNDElement] using function without indices. */ -inline fun ComplexNDElement.map(crossinline transform: ComplexField.(Complex) -> Complex): ComplexNDElement { - contract { callsInPlace(transform) } +public inline fun ComplexNDElement.map(transform: ComplexField.(Complex) -> Complex): ComplexNDElement { val buffer = Buffer.complex(strides.linearSize) { offset -> ComplexField.transform(buffer[offset]) } return BufferedNDFieldElement(context, buffer) } @@ -121,10 +119,9 @@ inline fun ComplexNDElement.map(crossinline transform: ComplexField.(Complex) -> /** * Element by element application of any operation on elements to the whole array. Just like in numpy */ -operator fun Function1.invoke(ndElement: ComplexNDElement): ComplexNDElement = +public operator fun Function1.invoke(ndElement: ComplexNDElement): ComplexNDElement = ndElement.map { this@invoke(it) } - /* plus and minus */ /** @@ -142,8 +139,10 @@ public operator fun ComplexNDElement.minus(arg: Double): ComplexNDElement = map public fun NDField.Companion.complex(vararg shape: Int): ComplexNDField = ComplexNDField(shape) -public fun NDElement.Companion.complex(vararg shape: Int, initializer: ComplexField.(IntArray) -> Complex): ComplexNDElement = - NDField.complex(*shape).produce(initializer) +public fun NDElement.Companion.complex( + vararg shape: Int, + initializer: ComplexField.(IntArray) -> Complex +): ComplexNDElement = NDField.complex(*shape).produce(initializer) /** * Produce a context for n-dimensional operations inside this real field diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt index 314f9fd63..d1165b895 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt @@ -1,7 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.contract import kotlin.experimental.and /** @@ -34,23 +32,23 @@ public enum class ValueFlag(public val mask: Byte) { /** * A buffer with flagged values. */ -interface FlaggedBuffer : Buffer { - fun getFlag(index: Int): Byte +public interface FlaggedBuffer : Buffer { + public fun getFlag(index: Int): Byte } /** * The value is valid if all flags are down */ -fun FlaggedBuffer<*>.isValid(index: Int): Boolean = getFlag(index) != 0.toByte() +public fun FlaggedBuffer<*>.isValid(index: Int): Boolean = getFlag(index) != 0.toByte() -fun FlaggedBuffer<*>.hasFlag(index: Int, flag: ValueFlag): Boolean = (getFlag(index) and flag.mask) != 0.toByte() +public fun FlaggedBuffer<*>.hasFlag(index: Int, flag: ValueFlag): Boolean = (getFlag(index) and flag.mask) != 0.toByte() -fun FlaggedBuffer<*>.isMissing(index: Int): Boolean = hasFlag(index, ValueFlag.MISSING) +public fun FlaggedBuffer<*>.isMissing(index: Int): Boolean = hasFlag(index, ValueFlag.MISSING) /** * A real buffer which supports flags for each value like NaN or Missing */ -class FlaggedRealBuffer(val values: DoubleArray, val flags: ByteArray) : FlaggedBuffer, Buffer { +public class FlaggedRealBuffer(public val values: DoubleArray, public val flags: ByteArray) : FlaggedBuffer, Buffer { init { require(values.size == flags.size) { "Values and flags must have the same dimensions" } } @@ -66,9 +64,7 @@ class FlaggedRealBuffer(val values: DoubleArray, val flags: ByteArray) : Flagged }.iterator() } -inline fun FlaggedRealBuffer.forEachValid(block: (Double) -> Unit) { - contract { callsInPlace(block) } - +public inline fun FlaggedRealBuffer.forEachValid(block: (Double) -> Unit) { indices .asSequence() .filter(::isValid) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt index 9e974c644..48947b8d7 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt @@ -8,7 +8,7 @@ import kotlin.contracts.contract * * @property array the underlying array. */ -inline class FloatBuffer(val array: FloatArray) : MutableBuffer { +public inline class FloatBuffer(public val array: FloatArray) : MutableBuffer { override val size: Int get() = array.size override operator fun get(index: Int): Float = array[index] @@ -30,20 +30,17 @@ inline class FloatBuffer(val array: FloatArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun FloatBuffer(size: Int, init: (Int) -> Float): FloatBuffer { - contract { callsInPlace(init) } - return FloatBuffer(FloatArray(size) { init(it) }) -} +public inline fun FloatBuffer(size: Int, init: (Int) -> Float): FloatBuffer = FloatBuffer(FloatArray(size) { init(it) }) /** * Returns a new [FloatBuffer] of given elements. */ -fun FloatBuffer(vararg floats: Float): FloatBuffer = FloatBuffer(floats) +public fun FloatBuffer(vararg floats: Float): FloatBuffer = FloatBuffer(floats) /** * Returns a [FloatArray] containing all of the elements of this [MutableBuffer]. */ -val MutableBuffer.array: FloatArray +public val MutableBuffer.array: FloatArray get() = (if (this is FloatBuffer) array else FloatArray(size) { get(it) }) /** @@ -52,4 +49,4 @@ val MutableBuffer.array: FloatArray * @receiver the array. * @return the new buffer. */ -fun FloatArray.asBuffer(): FloatBuffer = FloatBuffer(this) +public fun FloatArray.asBuffer(): FloatBuffer = FloatBuffer(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt index 88a3bd39d..49cc06755 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt @@ -1,9 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.InvocationKind -import kotlin.contracts.contract - /** * Specialized [MutableBuffer] implementation over [IntArray]. * @@ -31,20 +27,17 @@ public inline class IntBuffer(public val array: IntArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun IntBuffer(size: Int, init: (Int) -> Int): IntBuffer { - contract { callsInPlace(init) } - return IntBuffer(IntArray(size) { init(it) }) -} +public inline fun IntBuffer(size: Int, init: (Int) -> Int): IntBuffer = IntBuffer(IntArray(size) { init(it) }) /** * Returns a new [IntBuffer] of given elements. */ -fun IntBuffer(vararg ints: Int): IntBuffer = IntBuffer(ints) +public fun IntBuffer(vararg ints: Int): IntBuffer = IntBuffer(ints) /** * Returns a [IntArray] containing all of the elements of this [MutableBuffer]. */ -val MutableBuffer.array: IntArray +public val MutableBuffer.array: IntArray get() = (if (this is IntBuffer) array else IntArray(size) { get(it) }) /** @@ -53,4 +46,4 @@ val MutableBuffer.array: IntArray * @receiver the array. * @return the new buffer. */ -fun IntArray.asBuffer(): IntBuffer = IntBuffer(this) +public fun IntArray.asBuffer(): IntBuffer = IntBuffer(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt index 17f161d19..0fe975e42 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt @@ -31,10 +31,7 @@ public inline class LongBuffer(public val array: LongArray) : MutableBuffer Long): LongBuffer { - contract { callsInPlace(init) } - return LongBuffer(LongArray(size) { init(it) }) -} +public inline fun LongBuffer(size: Int, init: (Int) -> Long): LongBuffer = LongBuffer(LongArray(size) { init(it) }) /** * Returns a new [LongBuffer] of given elements. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt index 83c50b14b..2936932d0 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt @@ -9,7 +9,7 @@ import scientifik.memory.* * @property memory the underlying memory segment. * @property spec the spec of [T] type. */ -open class MemoryBuffer(protected val memory: Memory, protected val spec: MemorySpec) : Buffer { +public open class MemoryBuffer(protected val memory: Memory, protected val spec: MemorySpec) : Buffer { override val size: Int get() = memory.size / spec.objectSize private val reader: MemoryReader = memory.reader() @@ -17,20 +17,17 @@ open class MemoryBuffer(protected val memory: Memory, protected val spe override operator fun get(index: Int): T = reader.read(spec, spec.objectSize * index) override operator fun iterator(): Iterator = (0 until size).asSequence().map { get(it) }.iterator() - companion object { - fun create(spec: MemorySpec, size: Int): MemoryBuffer = + public companion object { + public fun create(spec: MemorySpec, size: Int): MemoryBuffer = MemoryBuffer(Memory.allocate(size * spec.objectSize), spec) - inline fun create( + public inline fun create( spec: MemorySpec, size: Int, - crossinline initializer: (Int) -> T - ): MemoryBuffer = - MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer -> - (0 until size).forEach { - buffer[it] = initializer(it) - } - } + initializer: (Int) -> T + ): MemoryBuffer = MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer -> + (0 until size).forEach { buffer[it] = initializer(it) } + } } } @@ -41,7 +38,7 @@ open class MemoryBuffer(protected val memory: Memory, protected val spe * @property memory the underlying memory segment. * @property spec the spec of [T] type. */ -class MutableMemoryBuffer(memory: Memory, spec: MemorySpec) : MemoryBuffer(memory, spec), +public class MutableMemoryBuffer(memory: Memory, spec: MemorySpec) : MemoryBuffer(memory, spec), MutableBuffer { private val writer: MemoryWriter = memory.writer() @@ -49,19 +46,16 @@ class MutableMemoryBuffer(memory: Memory, spec: MemorySpec) : Memory override operator fun set(index: Int, value: T): Unit = writer.write(spec, spec.objectSize * index, value) override fun copy(): MutableBuffer = MutableMemoryBuffer(memory.copy(), spec) - companion object { - fun create(spec: MemorySpec, size: Int): MutableMemoryBuffer = + public companion object { + public fun create(spec: MemorySpec, size: Int): MutableMemoryBuffer = MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec) - inline fun create( + public inline fun create( spec: MemorySpec, size: Int, crossinline initializer: (Int) -> T - ): MutableMemoryBuffer = - MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer -> - (0 until size).forEach { - buffer[it] = initializer(it) - } - } + ): MutableMemoryBuffer = MutableMemoryBuffer(Memory.allocate(size * spec.objectSize), spec).also { buffer -> + (0 until size).forEach { buffer[it] = initializer(it) } + } } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt index a28eda9b9..a6212469d 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt @@ -115,19 +115,18 @@ public interface NDField, N : NDStructure> : Field, NDRing public operator fun T.div(arg: N): N = map(arg) { divide(it, this@div) } - companion object { - - private val realNDFieldCache = HashMap() + public companion object { + private val realNDFieldCache: MutableMap = hashMapOf() /** * Create a nd-field for [Double] values or pull it from cache if it was created previously */ - fun real(vararg shape: Int): RealNDField = realNDFieldCache.getOrPut(shape) { RealNDField(shape) } + public fun real(vararg shape: Int): RealNDField = realNDFieldCache.getOrPut(shape) { RealNDField(shape) } /** * Create a nd-field with boxing generic buffer */ - fun > boxing( + public fun > boxing( field: F, vararg shape: Int, bufferFactory: BufferFactory = Buffer.Companion::boxing @@ -137,7 +136,7 @@ public interface NDField, N : NDStructure> : Field, NDRing * Create a most suitable implementation for nd-field using reified class. */ @Suppress("UNCHECKED_CAST") - inline fun > auto(field: F, vararg shape: Int): BufferedNDField = + public inline fun > auto(field: F, vararg shape: Int): BufferedNDField = when { T::class == Double::class -> real(*shape) as BufferedNDField T::class == Complex::class -> complex(*shape) as BufferedNDField diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt index 6cc0a72c0..99a87f374 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt @@ -4,6 +4,7 @@ import scientifik.kmath.operations.Field import scientifik.kmath.operations.RealField import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Space +import kotlin.contracts.contract /** * The root for all [NDStructure] based algebra elements. Does not implement algebra element root because of problems with recursive self-types @@ -11,31 +12,30 @@ import scientifik.kmath.operations.Space * @param C the type of the context for the element * @param N the type of the underlying [NDStructure] */ -interface NDElement> : NDStructure { +public interface NDElement> : NDStructure { + public val context: NDAlgebra - val context: NDAlgebra + public fun unwrap(): N - fun unwrap(): N + public fun N.wrap(): NDElement - fun N.wrap(): NDElement - - companion object { + public companion object { /** * Create a optimized NDArray of doubles */ - fun real(shape: IntArray, initializer: RealField.(IntArray) -> Double = { 0.0 }): RealNDElement = + public fun real(shape: IntArray, initializer: RealField.(IntArray) -> Double = { 0.0 }): RealNDElement = NDField.real(*shape).produce(initializer) - inline fun real1D(dim: Int, crossinline initializer: (Int) -> Double = { _ -> 0.0 }): RealNDElement = + public inline fun real1D(dim: Int, crossinline initializer: (Int) -> Double = { _ -> 0.0 }): RealNDElement = real(intArrayOf(dim)) { initializer(it[0]) } - inline fun real2D( + public inline fun real2D( dim1: Int, dim2: Int, crossinline initializer: (Int, Int) -> Double = { _, _ -> 0.0 } ): RealNDElement = real(intArrayOf(dim1, dim2)) { initializer(it[0], it[1]) } - inline fun real3D( + public inline fun real3D( dim1: Int, dim2: Int, dim3: Int, @@ -46,7 +46,7 @@ interface NDElement> : NDStructure { /** * Simple boxing NDArray */ - fun > boxing( + public fun > boxing( shape: IntArray, field: F, initializer: F.(IntArray) -> T @@ -55,7 +55,7 @@ interface NDElement> : NDStructure { return ndField.produce(initializer) } - inline fun > auto( + public inline fun > auto( shape: IntArray, field: F, noinline initializer: F.(IntArray) -> T @@ -66,17 +66,16 @@ interface NDElement> : NDStructure { } } - -fun > NDElement.mapIndexed(transform: C.(index: IntArray, T) -> T): NDElement = +public fun > NDElement.mapIndexed(transform: C.(index: IntArray, T) -> T): NDElement = context.mapIndexed(unwrap(), transform).wrap() -fun > NDElement.map(transform: C.(T) -> T): NDElement = +public fun > NDElement.map(transform: C.(T) -> T): NDElement = context.map(unwrap(), transform).wrap() /** * Element by element application of any operation on elements to the whole [NDElement] */ -operator fun > Function1.invoke(ndElement: NDElement): NDElement = +public operator fun > Function1.invoke(ndElement: NDElement): NDElement = ndElement.map { value -> this@invoke(value) } /* plus and minus */ @@ -84,13 +83,13 @@ operator fun > Function1.invoke(ndElement: NDElem /** * Summation operation for [NDElement] and single element */ -operator fun , N : NDStructure> NDElement.plus(arg: T): NDElement = +public operator fun , N : NDStructure> NDElement.plus(arg: T): NDElement = map { value -> arg + value } /** * Subtraction operation between [NDElement] and single element */ -operator fun , N : NDStructure> NDElement.minus(arg: T): NDElement = +public operator fun , N : NDStructure> NDElement.minus(arg: T): NDElement = map { value -> arg - value } /* prod and div */ @@ -98,13 +97,13 @@ operator fun , N : NDStructure> NDElement.minus(arg: /** * Product operation for [NDElement] and single element */ -operator fun , N : NDStructure> NDElement.times(arg: T): NDElement = +public operator fun , N : NDStructure> NDElement.times(arg: T): NDElement = map { value -> arg * value } /** * Division operation between [NDElement] and single element */ -operator fun , N : NDStructure> NDElement.div(arg: T): NDElement = +public operator fun , N : NDStructure> NDElement.div(arg: T): NDElement = map { value -> arg / value } // /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt index f4eb93b9e..d3007bb09 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.jvm.JvmName import kotlin.reflect.KClass @@ -12,17 +11,17 @@ import kotlin.reflect.KClass * * @param T the type of items. */ -interface NDStructure { +public interface NDStructure { /** * The shape of structure, i.e. non-empty sequence of non-negative integers that specify sizes of dimensions of * this structure. */ - val shape: IntArray + public val shape: IntArray /** * The count of dimensions in this structure. It should be equal to size of [shape]. */ - val dimension: Int get() = shape.size + public val dimension: Int get() = shape.size /** * Returns the value at the specified indices. @@ -30,24 +29,24 @@ interface NDStructure { * @param index the indices. * @return the value. */ - operator fun get(index: IntArray): T + public operator fun get(index: IntArray): T /** * Returns the sequence of all the elements associated by their indices. * * @return the lazy sequence of pairs of indices to values. */ - fun elements(): Sequence> + public fun elements(): Sequence> override fun equals(other: Any?): Boolean override fun hashCode(): Int - companion object { + public companion object { /** * Indicates whether some [NDStructure] is equal to another one. */ - fun equals(st1: NDStructure<*>, st2: NDStructure<*>): Boolean { + public fun equals(st1: NDStructure<*>, st2: NDStructure<*>): Boolean { if (st1 === st2) return true // fast comparison of buffers if possible @@ -68,7 +67,7 @@ interface NDStructure { * * Strides should be reused if possible. */ - fun build( + public fun build( strides: Strides, bufferFactory: BufferFactory = Buffer.Companion::boxing, initializer: (IntArray) -> T @@ -78,39 +77,39 @@ interface NDStructure { /** * Inline create NDStructure with non-boxing buffer implementation if it is possible */ - inline fun auto( + public inline fun auto( strides: Strides, crossinline initializer: (IntArray) -> T ): BufferNDStructure = BufferNDStructure(strides, Buffer.auto(strides.linearSize) { i -> initializer(strides.index(i)) }) - inline fun auto( + public inline fun auto( type: KClass, strides: Strides, crossinline initializer: (IntArray) -> T ): BufferNDStructure = BufferNDStructure(strides, Buffer.auto(type, strides.linearSize) { i -> initializer(strides.index(i)) }) - fun build( + public fun build( shape: IntArray, bufferFactory: BufferFactory = Buffer.Companion::boxing, initializer: (IntArray) -> T ): BufferNDStructure = build(DefaultStrides(shape), bufferFactory, initializer) - inline fun auto( + public inline fun auto( shape: IntArray, crossinline initializer: (IntArray) -> T ): BufferNDStructure = auto(DefaultStrides(shape), initializer) @JvmName("autoVarArg") - inline fun auto( + public inline fun auto( vararg shape: Int, crossinline initializer: (IntArray) -> T ): BufferNDStructure = auto(DefaultStrides(shape), initializer) - inline fun auto( + public inline fun auto( type: KClass, vararg shape: Int, crossinline initializer: (IntArray) -> T @@ -125,68 +124,68 @@ interface NDStructure { * @param index the indices. * @return the value. */ -operator fun NDStructure.get(vararg index: Int): T = get(index) +public operator fun NDStructure.get(vararg index: Int): T = get(index) /** * Represents mutable [NDStructure]. */ -interface MutableNDStructure : NDStructure { +public interface MutableNDStructure : NDStructure { /** * Inserts an item at the specified indices. * * @param index the indices. * @param value the value. */ - operator fun set(index: IntArray, value: T) + public operator fun set(index: IntArray, value: T) } -inline fun MutableNDStructure.mapInPlace(action: (IntArray, T) -> T) { - contract { callsInPlace(action) } +public inline fun MutableNDStructure.mapInPlace(action: (IntArray, T) -> T): Unit = elements().forEach { (index, oldValue) -> this[index] = action(index, oldValue) } -} /** * A way to convert ND index to linear one and back. */ -interface Strides { +public interface Strides { /** * Shape of NDstructure */ - val shape: IntArray + public val shape: IntArray /** * Array strides */ - val strides: List + public val strides: List /** * Get linear index from multidimensional index */ - fun offset(index: IntArray): Int + public fun offset(index: IntArray): Int /** * Get multidimensional from linear */ - fun index(offset: Int): IntArray + public fun index(offset: Int): IntArray /** * The size of linear buffer to accommodate all elements of ND-structure corresponding to strides */ - val linearSize: Int + public val linearSize: Int + + // TODO introduce a fast way to calculate index of the next element? /** * Iterate over ND indices in a natural order */ - fun indices(): Sequence { - //TODO introduce a fast way to calculate index of the next element? - return (0 until linearSize).asSequence().map { index(it) } - } + public fun indices(): Sequence = (0 until linearSize).asSequence().map { index(it) } } /** * Simple implementation of [Strides]. */ -class DefaultStrides private constructor(override val shape: IntArray) : Strides { +public class DefaultStrides private constructor(override val shape: IntArray) : Strides { + override val linearSize: Int + get() = strides[shape.size] + /** * Strides for memory access */ @@ -194,6 +193,7 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides sequence { var current = 1 yield(1) + shape.forEach { current *= it yield(current) @@ -212,17 +212,16 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides val res = IntArray(shape.size) var current = offset var strideIndex = strides.size - 2 + while (strideIndex >= 0) { res[strideIndex] = (current / strides[strideIndex]) current %= strides[strideIndex] strideIndex-- } + return res } - override val linearSize: Int - get() = strides[shape.size] - override fun equals(other: Any?): Boolean { if (this === other) return true if (other !is DefaultStrides) return false @@ -232,13 +231,14 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides override fun hashCode(): Int = shape.contentHashCode() - companion object { + public companion object { private val defaultStridesCache = HashMap() /** * Cached builder for default strides */ - operator fun invoke(shape: IntArray): Strides = defaultStridesCache.getOrPut(shape) { DefaultStrides(shape) } + public operator fun invoke(shape: IntArray): Strides = + defaultStridesCache.getOrPut(shape) { DefaultStrides(shape) } } } @@ -247,16 +247,16 @@ class DefaultStrides private constructor(override val shape: IntArray) : Strides * * @param T the type of items. */ -abstract class NDBuffer : NDStructure { +public abstract class NDBuffer : NDStructure { /** * The underlying buffer. */ - abstract val buffer: Buffer + public abstract val buffer: Buffer /** * The strides to access elements of [Buffer] by linear indices. */ - abstract val strides: Strides + public abstract val strides: Strides override operator fun get(index: IntArray): T = buffer[strides.offset(index)] @@ -278,7 +278,7 @@ abstract class NDBuffer : NDStructure { /** * Boxing generic [NDStructure] */ -class BufferNDStructure( +public class BufferNDStructure( override val strides: Strides, override val buffer: Buffer ) : NDBuffer() { @@ -292,13 +292,13 @@ class BufferNDStructure( /** * Transform structure to a new structure using provided [BufferFactory] and optimizing if argument is [BufferNDStructure] */ -inline fun NDStructure.mapToBuffer( +public inline fun NDStructure.mapToBuffer( factory: BufferFactory = Buffer.Companion::auto, crossinline transform: (T) -> R ): BufferNDStructure { - return if (this is BufferNDStructure) { + return if (this is BufferNDStructure) BufferNDStructure(this.strides, factory.invoke(strides.linearSize) { transform(buffer[it]) }) - } else { + else { val strides = DefaultStrides(shape) BufferNDStructure(strides, factory.invoke(strides.linearSize) { transform(get(strides.index(it))) }) } @@ -307,7 +307,7 @@ inline fun NDStructure.mapToBuffer( /** * Mutable ND buffer based on linear [MutableBuffer]. */ -class MutableBufferNDStructure( +public class MutableBufferNDStructure( override val strides: Strides, override val buffer: MutableBuffer ) : NDBuffer(), MutableNDStructure { @@ -321,7 +321,7 @@ class MutableBufferNDStructure( override operator fun set(index: IntArray, value: T): Unit = buffer.set(strides.offset(index), value) } -inline fun NDStructure.combine( +public inline fun NDStructure.combine( struct: NDStructure, crossinline block: (T, T) -> T ): NDStructure { diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt index cba8e9689..050e5eddb 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt @@ -1,14 +1,11 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.contract - /** * Specialized [MutableBuffer] implementation over [DoubleArray]. * * @property array the underlying array. */ -inline class RealBuffer(val array: DoubleArray) : MutableBuffer { +public inline class RealBuffer(public val array: DoubleArray) : MutableBuffer { override val size: Int get() = array.size override operator fun get(index: Int): Double = array[index] @@ -30,20 +27,17 @@ inline class RealBuffer(val array: DoubleArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun RealBuffer(size: Int, init: (Int) -> Double): RealBuffer { - contract { callsInPlace(init) } - return RealBuffer(DoubleArray(size) { init(it) }) -} +public inline fun RealBuffer(size: Int, init: (Int) -> Double): RealBuffer = RealBuffer(DoubleArray(size) { init(it) }) /** * Returns a new [RealBuffer] of given elements. */ -fun RealBuffer(vararg doubles: Double): RealBuffer = RealBuffer(doubles) +public fun RealBuffer(vararg doubles: Double): RealBuffer = RealBuffer(doubles) /** * Returns a [DoubleArray] containing all of the elements of this [MutableBuffer]. */ -val MutableBuffer.array: DoubleArray +public val MutableBuffer.array: DoubleArray get() = (if (this is RealBuffer) array else DoubleArray(size) { get(it) }) /** @@ -52,4 +46,4 @@ val MutableBuffer.array: DoubleArray * @receiver the array. * @return the new buffer. */ -fun DoubleArray.asBuffer(): RealBuffer = RealBuffer(this) +public fun DoubleArray.asBuffer(): RealBuffer = RealBuffer(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt index a11826e7e..db79c6b78 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt @@ -4,11 +4,10 @@ import scientifik.kmath.operations.ExtendedField import scientifik.kmath.operations.ExtendedFieldOperations import kotlin.math.* - /** * [ExtendedFieldOperations] over [RealBuffer]. */ -object RealBufferFieldOperations : ExtendedFieldOperations> { +public object RealBufferFieldOperations : ExtendedFieldOperations> { override fun add(a: Buffer, b: Buffer): RealBuffer { require(b.size == a.size) { "The size of the first buffer ${a.size} should be the same as for second one: ${b.size} " @@ -73,9 +72,8 @@ object RealBufferFieldOperations : ExtendedFieldOperations> { override fun asin(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { asin(array[it]) }) - } else { + } else RealBuffer(DoubleArray(arg.size) { asin(arg[it]) }) - } override fun acos(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array @@ -92,37 +90,44 @@ object RealBufferFieldOperations : ExtendedFieldOperations> { override fun sinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { sinh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { sinh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { sinh(arg[it]) }) override fun cosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { cosh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { cosh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { cosh(arg[it]) }) override fun tanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { tanh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { tanh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { tanh(arg[it]) }) override fun asinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { asinh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { asinh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { asinh(arg[it]) }) override fun acosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { acosh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { acosh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { acosh(arg[it]) }) override fun atanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { atanh(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { atanh(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { atanh(arg[it]) }) override fun power(arg: Buffer, pow: Number): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { array[it].pow(pow.toDouble()) }) - } else RealBuffer(DoubleArray(arg.size) { arg[it].pow(pow.toDouble()) }) + } else + RealBuffer(DoubleArray(arg.size) { arg[it].pow(pow.toDouble()) }) override fun exp(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array @@ -132,7 +137,8 @@ object RealBufferFieldOperations : ExtendedFieldOperations> { override fun ln(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { ln(array[it]) }) - } else RealBuffer(DoubleArray(arg.size) { ln(arg[it]) }) + } else + RealBuffer(DoubleArray(arg.size) { ln(arg[it]) }) } /** @@ -140,7 +146,7 @@ object RealBufferFieldOperations : ExtendedFieldOperations> { * * @property size the size of buffers to operate on. */ -class RealBufferField(val size: Int) : ExtendedField> { +public class RealBufferField(public val size: Int) : ExtendedField> { override val zero: Buffer by lazy { RealBuffer(size) { 0.0 } } override val one: Buffer by lazy { RealBuffer(size) { 1.0 } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt index ac2adbe9b..94855d670 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt @@ -112,26 +112,22 @@ public inline fun RealNDElement.map(crossinline transform: RealField.(Double) -> /** * Element by element application of any operation on elements to the whole array. Just like in numpy. */ -operator fun Function1.invoke(ndElement: RealNDElement): RealNDElement = +public operator fun Function1.invoke(ndElement: RealNDElement): RealNDElement = ndElement.map { this@invoke(it) } - /* plus and minus */ /** * Summation operation for [BufferedNDElement] and single element */ -operator fun RealNDElement.plus(arg: Double): RealNDElement = - map { it + arg } +public operator fun RealNDElement.plus(arg: Double): RealNDElement = map { it + arg } /** * Subtraction operation between [BufferedNDElement] and single element */ -operator fun RealNDElement.minus(arg: Double): RealNDElement = - map { it - arg } +public operator fun RealNDElement.minus(arg: Double): RealNDElement = map { it - arg } /** * Produce a context for n-dimensional operations inside this real field */ - -inline fun RealField.nd(vararg shape: Int, action: RealNDField.() -> R): R = NDField.real(*shape).run(action) +public inline fun RealField.nd(vararg shape: Int, action: RealNDField.() -> R): R = NDField.real(*shape).run(action) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt index 82deb9275..d1a725556 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract /** @@ -30,10 +29,7 @@ public inline class ShortBuffer(public val array: ShortArray) : MutableBuffer Short): ShortBuffer { - contract { callsInPlace(init) } - return ShortBuffer(ShortArray(size) { init(it) }) -} +public inline fun ShortBuffer(size: Int, init: (Int) -> Short): ShortBuffer = ShortBuffer(ShortArray(size) { init(it) }) /** * Returns a new [ShortBuffer] of given elements. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt index 9a2ec1c88..30e87fd6a 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt @@ -2,7 +2,6 @@ package scientifik.kmath.structures import scientifik.kmath.operations.RingElement import scientifik.kmath.operations.ShortRing -import kotlin.contracts.contract public typealias ShortNDElement = BufferedNDRingElement @@ -69,11 +68,8 @@ public class ShortNDRing(override val shape: IntArray) : /** * Fast element production using function inlining. */ -public inline fun BufferedNDRing.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement { - contract { callsInPlace(initializer) } - val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) } - return BufferedNDRingElement(this, ShortBuffer(array)) -} +public inline fun BufferedNDRing.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement = + BufferedNDRingElement(this, ShortBuffer(ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) })) /** * Element by element application of any operation on elements to the whole array. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt index a796c2037..22d0c4750 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt @@ -3,7 +3,7 @@ package scientifik.kmath.structures /** * A structure that is guaranteed to be one-dimensional */ -interface Structure1D : NDStructure, Buffer { +public interface Structure1D : NDStructure, Buffer { override val dimension: Int get() = 1 override operator fun get(index: IntArray): T { @@ -11,14 +11,13 @@ interface Structure1D : NDStructure, Buffer { return get(index[0]) } - override operator fun iterator(): Iterator = (0 until size).asSequence().map { get(it) }.iterator() + override operator fun iterator(): Iterator = (0 until size).asSequence().map(::get).iterator() } /** * A 1D wrapper for nd-structure */ private inline class Structure1DWrapper(val structure: NDStructure) : Structure1D { - override val shape: IntArray get() = structure.shape override val size: Int get() = structure.shape[0] @@ -45,18 +44,12 @@ private inline class Buffer1DWrapper(val buffer: Buffer) : Structure1D /** * Represent a [NDStructure] as [Structure1D]. Throw error in case of dimension mismatch */ -fun NDStructure.as1D(): Structure1D = if (shape.size == 1) { - if (this is NDBuffer) { - Buffer1DWrapper(this.buffer) - } else { - Structure1DWrapper(this) - } -} else { +public fun NDStructure.as1D(): Structure1D = if (shape.size == 1) { + if (this is NDBuffer) Buffer1DWrapper(this.buffer) else Structure1DWrapper(this) +} else error("Can't create 1d-structure from ${shape.size}d-structure") -} - /** * Represent this buffer as 1D structure */ -fun Buffer.asND(): Structure1D = Buffer1DWrapper(this) +public fun Buffer.asND(): Structure1D = Buffer1DWrapper(this) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt index e0ae4d4a2..7633d8898 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt @@ -21,11 +21,8 @@ public interface Structure2D : NDStructure { get() = VirtualBuffer(colNum) { j -> VirtualBuffer(rowNum) { i -> get(i, j) } } override fun elements(): Sequence> = sequence { - for (i in (0 until rowNum)) { - for (j in (0 until colNum)) { - yield(intArrayOf(i, j) to get(i, j)) - } - } + for (i in (0 until rowNum)) + for (j in (0 until colNum)) yield(intArrayOf(i, j) to get(i, j)) } public companion object @@ -45,10 +42,9 @@ private inline class Structure2DWrapper(val structure: NDStructure) : Stru /** * Represent a [NDStructure] as [Structure1D]. Throw error in case of dimension mismatch */ -public fun NDStructure.as2D(): Structure2D = if (shape.size == 2) { +public fun NDStructure.as2D(): Structure2D = if (shape.size == 2) Structure2DWrapper(this) -} else { +else error("Can't create 2d-structure from ${shape.size}d-structure") -} public typealias Matrix = Structure2D diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt index 692f89589..86bc2d6e3 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt @@ -3,9 +3,8 @@ package scientifik.kmath.coroutines import kotlinx.coroutines.* import kotlinx.coroutines.channels.produce import kotlinx.coroutines.flow.* -import kotlin.contracts.contract -val Dispatchers.Math: CoroutineDispatcher +public val Dispatchers.Math: CoroutineDispatcher get() = Default /** @@ -15,31 +14,25 @@ internal class LazyDeferred(val dispatcher: CoroutineDispatcher, val block: s private var deferred: Deferred? = null internal fun start(scope: CoroutineScope) { - if (deferred == null) { - deferred = scope.async(dispatcher, block = block) - } + if (deferred == null) deferred = scope.async(dispatcher, block = block) } suspend fun await(): T = deferred?.await() ?: error("Coroutine not started") } -class AsyncFlow internal constructor(internal val deferredFlow: Flow>) : Flow { - override suspend fun collect(collector: FlowCollector) { - deferredFlow.collect { collector.emit((it.await())) } - } +public class AsyncFlow internal constructor(internal val deferredFlow: Flow>) : Flow { + override suspend fun collect(collector: FlowCollector): Unit = deferredFlow.collect { collector.emit((it.await())) } } -fun Flow.async( +public fun Flow.async( dispatcher: CoroutineDispatcher = Dispatchers.Default, block: suspend CoroutineScope.(T) -> R ): AsyncFlow { - val flow = map { - LazyDeferred(dispatcher) { block(it) } - } + val flow = map { LazyDeferred(dispatcher) { block(it) } } return AsyncFlow(flow) } -fun AsyncFlow.map(action: (T) -> R): AsyncFlow = +public fun AsyncFlow.map(action: (T) -> R): AsyncFlow = AsyncFlow(deferredFlow.map { input -> //TODO add function composition LazyDeferred(input.dispatcher) { @@ -48,7 +41,7 @@ fun AsyncFlow.map(action: (T) -> R): AsyncFlow = } }) -suspend fun AsyncFlow.collect(concurrency: Int, collector: FlowCollector) { +public suspend fun AsyncFlow.collect(concurrency: Int, collector: FlowCollector) { require(concurrency >= 1) { "Buffer size should be more than 1, but was $concurrency" } coroutineScope { @@ -76,18 +69,14 @@ suspend fun AsyncFlow.collect(concurrency: Int, collector: FlowCollector< } } -suspend inline fun AsyncFlow.collect(concurrency: Int, crossinline action: suspend (value: T) -> Unit) { - contract { callsInPlace(action) } +public suspend inline fun AsyncFlow.collect( + concurrency: Int, + crossinline action: suspend (value: T) -> Unit +): Unit = collect(concurrency, object : FlowCollector { + override suspend fun emit(value: T): Unit = action(value) +}) - collect(concurrency, object : FlowCollector { - override suspend fun emit(value: T): Unit = action(value) - }) -} - -inline fun Flow.mapParallel( +public inline fun Flow.mapParallel( dispatcher: CoroutineDispatcher = Dispatchers.Default, crossinline transform: suspend (T) -> R -): Flow { - contract { callsInPlace(transform) } - return flatMapMerge { value -> flow { emit(transform(value)) } }.flowOn(dispatcher) -} +): Flow = flatMapMerge { value -> flow { emit(transform(value)) } }.flowOn(dispatcher) diff --git a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt index ff732a06b..a607d2d85 100644 --- a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt +++ b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt @@ -3,38 +3,31 @@ package scientifik.kmath.structures import kotlinx.coroutines.* import scientifik.kmath.coroutines.Math -class LazyNDStructure( - val scope: CoroutineScope, - override val shape: IntArray, - val function: suspend (IntArray) -> T +public class LazyNDStructure( + public val scope: CoroutineScope, + public override val shape: IntArray, + public val function: suspend (IntArray) -> T ) : NDStructure { private val cache: MutableMap> = hashMapOf() - fun deferred(index: IntArray): Deferred = cache.getOrPut(index) { - scope.async(context = Dispatchers.Math) { - function(index) - } + public fun deferred(index: IntArray): Deferred = cache.getOrPut(index) { + scope.async(context = Dispatchers.Math) { function(index) } } - suspend fun await(index: IntArray): T = deferred(index).await() + public suspend fun await(index: IntArray): T = deferred(index).await() + public override operator fun get(index: IntArray): T = runBlocking { deferred(index).await() } - override operator fun get(index: IntArray): T = runBlocking { - deferred(index).await() - } - - override fun elements(): Sequence> { + public override fun elements(): Sequence> { val strides = DefaultStrides(shape) - val res = runBlocking { - strides.indices().toList().map { index -> index to await(index) } - } + val res = runBlocking { strides.indices().toList().map { index -> index to await(index) } } return res.asSequence() } - override fun equals(other: Any?): Boolean { + public override fun equals(other: Any?): Boolean { return NDStructure.equals(this, other as? NDStructure<*> ?: return false) } - override fun hashCode(): Int { + public override fun hashCode(): Int { var result = scope.hashCode() result = 31 * result + shape.contentHashCode() result = 31 * result + function.hashCode() @@ -43,21 +36,21 @@ class LazyNDStructure( } } -fun NDStructure.deferred(index: IntArray): Deferred = +public fun NDStructure.deferred(index: IntArray): Deferred = if (this is LazyNDStructure) this.deferred(index) else CompletableDeferred(get(index)) -suspend fun NDStructure.await(index: IntArray): T = +public suspend fun NDStructure.await(index: IntArray): T = if (this is LazyNDStructure) this.await(index) else get(index) /** * PENDING would benefit from KEEP-176 */ -inline fun NDStructure.mapAsyncIndexed( +public inline fun NDStructure.mapAsyncIndexed( scope: CoroutineScope, crossinline function: suspend (T, index: IntArray) -> R ): LazyNDStructure = LazyNDStructure(scope, shape) { index -> function(get(index), index) } -inline fun NDStructure.mapAsync( +public inline fun NDStructure.mapAsync( scope: CoroutineScope, crossinline function: suspend (T) -> R ): LazyNDStructure = LazyNDStructure(scope, shape) { index -> function(get(index)) } diff --git a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt index 7b0244bdf..8ebbf47c0 100644 --- a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt +++ b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt @@ -13,35 +13,36 @@ import scientifik.kmath.structures.Structure2D /** * A matrix with compile-time controlled dimension */ -interface DMatrix : Structure2D { - companion object { +public interface DMatrix : Structure2D { + public companion object { /** * Coerces a regular matrix to a matrix with type-safe dimensions and throws a error if coercion failed */ - inline fun coerce(structure: Structure2D): DMatrix { - if (structure.rowNum != Dimension.dim().toInt()) { - error("Row number mismatch: expected ${Dimension.dim()} but found ${structure.rowNum}") + public inline fun coerce(structure: Structure2D): DMatrix { + require(structure.rowNum == Dimension.dim().toInt()) { + "Row number mismatch: expected ${Dimension.dim()} but found ${structure.rowNum}" } - if (structure.colNum != Dimension.dim().toInt()) { - error("Column number mismatch: expected ${Dimension.dim()} but found ${structure.colNum}") + + require(structure.colNum == Dimension.dim().toInt()) { + "Column number mismatch: expected ${Dimension.dim()} but found ${structure.colNum}" } + return DMatrixWrapper(structure) } /** - * The same as [coerce] but without dimension checks. Use with caution + * The same as [DMatrix.coerce] but without dimension checks. Use with caution */ - fun coerceUnsafe(structure: Structure2D): DMatrix { - return DMatrixWrapper(structure) - } + public fun coerceUnsafe(structure: Structure2D): DMatrix = + DMatrixWrapper(structure) } } /** * An inline wrapper for a Matrix */ -inline class DMatrixWrapper( - val structure: Structure2D +public inline class DMatrixWrapper( + public val structure: Structure2D ) : DMatrix { override val shape: IntArray get() = structure.shape override operator fun get(i: Int, j: Int): T = structure[i, j] @@ -50,25 +51,24 @@ inline class DMatrixWrapper( /** * Dimension-safe point */ -interface DPoint : Point { - companion object { - inline fun coerce(point: Point): DPoint { - if (point.size != Dimension.dim().toInt()) { - error("Vector dimension mismatch: expected ${Dimension.dim()}, but found ${point.size}") +public interface DPoint : Point { + public companion object { + public inline fun coerce(point: Point): DPoint { + require(point.size == Dimension.dim().toInt()) { + "Vector dimension mismatch: expected ${Dimension.dim()}, but found ${point.size}" } + return DPointWrapper(point) } - fun coerceUnsafe(point: Point): DPoint { - return DPointWrapper(point) - } + public fun coerceUnsafe(point: Point): DPoint = DPointWrapper(point) } } /** * Dimension-safe point wrapper */ -inline class DPointWrapper(val point: Point) : +public inline class DPointWrapper(public val point: Point) : DPoint { override val size: Int get() = point.size @@ -81,16 +81,15 @@ inline class DPointWrapper(val point: Point) : /** * Basic operations on dimension-safe matrices. Operates on [Matrix] */ -inline class DMatrixContext>(val context: GenericMatrixContext) { +public inline class DMatrixContext>(public val context: GenericMatrixContext) { + public inline fun Matrix.coerce(): DMatrix { + require(rowNum == Dimension.dim().toInt()) { + "Row number mismatch: expected ${Dimension.dim()} but found $rowNum" + } - inline fun Matrix.coerce(): DMatrix { - check( - rowNum == Dimension.dim().toInt() - ) { "Row number mismatch: expected ${Dimension.dim()} but found $rowNum" } - - check( - colNum == Dimension.dim().toInt() - ) { "Column number mismatch: expected ${Dimension.dim()} but found $colNum" } + require(colNum == Dimension.dim().toInt()) { + "Column number mismatch: expected ${Dimension.dim()} but found $colNum" + } return DMatrix.coerceUnsafe(this) } @@ -98,13 +97,13 @@ inline class DMatrixContext>(val context: GenericMatrixCon /** * Produce a matrix with this context and given dimensions */ - inline fun produce(noinline initializer: (i: Int, j: Int) -> T): DMatrix { + public inline fun produce(noinline initializer: (i: Int, j: Int) -> T): DMatrix { val rows = Dimension.dim() val cols = Dimension.dim() return context.produce(rows.toInt(), cols.toInt(), initializer).coerce() } - inline fun point(noinline initializer: (Int) -> T): DPoint { + public inline fun point(noinline initializer: (Int) -> T): DPoint { val size = Dimension.dim() return DPoint.coerceUnsafe( @@ -115,7 +114,7 @@ inline class DMatrixContext>(val context: GenericMatrixCon ) } - inline infix fun DMatrix.dot( + public inline infix fun DMatrix.dot( other: DMatrix ): DMatrix = context { this@dot dot other }.coerce() diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt index a3b41288a..5cecafd2e 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt @@ -116,16 +116,13 @@ public operator fun Matrix.minus(other: Matrix): RealMatrix = * Operations on columns */ -public inline fun Matrix.appendColumn(crossinline mapper: (Buffer) -> Double): Matrix { - contract { callsInPlace(mapper) } - - return MatrixContext.real.produce(rowNum, colNum + 1) { row, col -> +public inline fun Matrix.appendColumn(crossinline mapper: (Buffer) -> Double): Matrix = + MatrixContext.real.produce(rowNum, colNum + 1) { row, col -> if (col < colNum) this[row, col] else mapper(rows[row]) } -} public fun Matrix.extractColumns(columnRange: IntRange): RealMatrix = MatrixContext.real.produce(rowNum, columnRange.count()) { row, col -> diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt index b11469ccf..52030f0fd 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt @@ -12,11 +12,10 @@ public fun interface PiecewisePolynomial : /** * Ordered list of pieces in piecewise function */ -public class OrderedPiecewisePolynomial>(delimeter: T) : +public class OrderedPiecewisePolynomial>(delimiter: T) : PiecewisePolynomial { - - private val delimiters: ArrayList = arrayListOf(delimeter) - private val pieces: ArrayList> = ArrayList() + private val delimiters: MutableList = arrayListOf(delimiter) + private val pieces: MutableList> = arrayListOf() /** * Dynamically add a piece to the "right" side (beyond maximum argument value of previous piece) @@ -35,14 +34,13 @@ public class OrderedPiecewisePolynomial>(delimeter: T) : } override fun findPiece(arg: T): Polynomial? { - if (arg < delimiters.first() || arg >= delimiters.last()) { + if (arg < delimiters.first() || arg >= delimiters.last()) return null - } else { - for (index in 1 until delimiters.size) { - if (arg < delimiters[index]) { + else { + for (index in 1 until delimiters.size) + if (arg < delimiters[index]) return pieces[index - 1] - } - } + error("Piece not found") } } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index 35f1a1e16..25a9a9421 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -48,9 +48,9 @@ public fun > Polynomial.asFunction(ring: C): (T) -> T = * An algebra for polynomials */ public class PolynomialSpace>(public val ring: C) : Space> { - override val zero: Polynomial = Polynomial(emptyList()) + public override val zero: Polynomial = Polynomial(emptyList()) - override fun add(a: Polynomial, b: Polynomial): Polynomial { + public override fun add(a: Polynomial, b: Polynomial): Polynomial { val dim = max(a.coefficients.size, b.coefficients.size) return ring { @@ -60,7 +60,7 @@ public class PolynomialSpace>(public val ring: C) : Space

, k: Number): Polynomial = + public override fun multiply(a: Polynomial, k: Number): Polynomial = ring { Polynomial(List(a.coefficients.size) { index -> a.coefficients[index] * k }) } public operator fun Polynomial.invoke(arg: T): T = value(ring, arg) diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt index 95e734da8..a53cafece 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt @@ -22,7 +22,7 @@ public interface PolynomialInterpolator> : Interpolator } } -fun > PolynomialInterpolator.interpolatePolynomials( +public fun > PolynomialInterpolator.interpolatePolynomials( x: Buffer, y: Buffer ): PiecewisePolynomial { @@ -30,16 +30,16 @@ fun > PolynomialInterpolator.interpolatePolynomials( return interpolatePolynomials(pointSet) } -fun > PolynomialInterpolator.interpolatePolynomials( +public fun > PolynomialInterpolator.interpolatePolynomials( data: Map ): PiecewisePolynomial { val pointSet = BufferXYPointSet(data.keys.toList().asBuffer(), data.values.toList().asBuffer()) return interpolatePolynomials(pointSet) } -fun > PolynomialInterpolator.interpolatePolynomials( +public fun > PolynomialInterpolator.interpolatePolynomials( data: List> ): PiecewisePolynomial { val pointSet = BufferXYPointSet(data.map { it.first }.asBuffer(), data.map { it.second }.asBuffer()) return interpolatePolynomials(pointSet) -} \ No newline at end of file +} diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt index 03a4625fc..4fac86693 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt @@ -9,8 +9,8 @@ import scientifik.kmath.operations.invoke /** * Reference JVM implementation: https://github.com/apache/commons-math/blob/master/src/main/java/org/apache/commons/math4/analysis/interpolation/LinearInterpolator.java */ -public class LinearInterpolator>(override val algebra: Field) : PolynomialInterpolator { - override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { +public class LinearInterpolator>(public override val algebra: Field) : PolynomialInterpolator { + public override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { require(points.size > 0) { "Point array should not be empty" } insureSorted(points) diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt index c8ab42bf4..eec61159d 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt @@ -12,13 +12,13 @@ import scientifik.kmath.structures.MutableBufferFactory * Based on https://github.com/apache/commons-math/blob/eb57d6d457002a0bb5336d789a3381a24599affe/src/main/java/org/apache/commons/math4/analysis/interpolation/SplineInterpolator.java */ public class SplineInterpolator>( - override val algebra: Field, + public override val algebra: Field, public val bufferFactory: MutableBufferFactory ) : PolynomialInterpolator { //TODO possibly optimize zeroed buffers - override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { + public override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { if (points.size < 3) { error("Can't use spline interpolator with less than 3 points") } @@ -41,8 +41,9 @@ public class SplineInterpolator>( // cubic spline coefficients -- b is linear, c quadratic, d is cubic (original y's are constants) - OrderedPiecewisePolynomial(points.x[points.size - 1]).apply { + OrderedPiecewisePolynomial(points.x[points.size - 1]).apply { var cOld = zero + for (j in n - 1 downTo 0) { val c = z[j] - mu[j] * cOld val a = points.y[j] diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt index 19297036b..3c45223d9 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt @@ -14,32 +14,32 @@ public interface XYZPointSet : XYPointSet { } internal fun > insureSorted(points: XYPointSet) { - for (i in 0 until points.size - 1) require(points.x[i + 1] > points.x[i]) { "Input data is not sorted at index $i" } + for (i in 0 until points.size - 1) + require(points.x[i + 1] > points.x[i]) { "Input data is not sorted at index $i" } } public class NDStructureColumn(public val structure: Structure2D, public val column: Int) : Buffer { + public override val size: Int + get() = structure.rowNum + init { require(column < structure.colNum) { "Column index is outside of structure column range" } } - override val size: Int get() = structure.rowNum - - override operator fun get(index: Int): T = structure[index, column] - - override operator fun iterator(): Iterator = sequence { - repeat(size) { - yield(get(it)) - } - }.iterator() + public override operator fun get(index: Int): T = structure[index, column] + public override operator fun iterator(): Iterator = sequence { repeat(size) { yield(get(it)) } }.iterator() } -public class BufferXYPointSet(override val x: Buffer, override val y: Buffer) : XYPointSet { +public class BufferXYPointSet( + public override val x: Buffer, + public override val y: Buffer +) : XYPointSet { + public override val size: Int + get() = x.size + init { require(x.size == y.size) { "Sizes of x and y buffers should be the same" } } - - override val size: Int - get() = x.size } public fun Structure2D.asXYPointSet(): XYPointSet { diff --git a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt b/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt index 540494caf..3d39de4c9 100644 --- a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt +++ b/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt @@ -6,7 +6,7 @@ import scientifik.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals -class LinearInterpolatorTest { +internal class LinearInterpolatorTest { @Test fun testInterpolation() { val data = listOf( @@ -15,9 +15,9 @@ class LinearInterpolatorTest { 2.0 to 3.0, 3.0 to 4.0 ) + val polynomial: PiecewisePolynomial = LinearInterpolator(RealField).interpolatePolynomials(data) val function = polynomial.asFunction(RealField) - assertEquals(null, function(-1.0)) assertEquals(0.5, function(0.5)) assertEquals(2.0, function(1.5)) diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt index 551b877a7..be5bf5740 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt +++ b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt @@ -4,17 +4,16 @@ import org.jetbrains.bio.viktor.F64FlatArray import scientifik.kmath.structures.MutableBuffer @Suppress("NOTHING_TO_INLINE", "OVERRIDE_BY_INLINE") -inline class ViktorBuffer(val flatArray: F64FlatArray) : MutableBuffer { - override val size: Int get() = flatArray.size +public inline class ViktorBuffer(public val flatArray: F64FlatArray) : MutableBuffer { + public override val size: Int + get() = flatArray.size + + public override inline fun get(index: Int): Double = flatArray[index] - override inline fun get(index: Int): Double = flatArray[index] override inline fun set(index: Int, value: Double) { flatArray[index] = value } - override fun copy(): MutableBuffer { - return ViktorBuffer(flatArray.copy().flatten()) - } - - override operator fun iterator(): Iterator = flatArray.data.iterator() + public override fun copy(): MutableBuffer = ViktorBuffer(flatArray.copy().flatten()) + public override operator fun iterator(): Iterator = flatArray.data.iterator() } diff --git a/settings.gradle.kts b/settings.gradle.kts index 102cde93f..a09e4e144 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -1,12 +1,12 @@ pluginManagement { - val toolsVersion = "0.6.0-dev-3" + val toolsVersion = "0.6.0-dev-5" plugins { id("kotlinx.benchmark") version "0.2.0-dev-20" id("ru.mipt.npm.mpp") version toolsVersion id("ru.mipt.npm.jvm") version toolsVersion id("ru.mipt.npm.publish") version toolsVersion - kotlin("plugin.allopen") version "1.4.0" + kotlin("plugin.allopen") version "1.4.20-dev-3898-14" } repositories { @@ -17,6 +17,7 @@ pluginManagement { maven("https://dl.bintray.com/mipt-npm/scientifik") maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlinx") + maven("https://dl.bintray.com/kotlin/kotlin-dev/") } } From f567f73d19d7f0d7e4646890586833101a863e3c Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Wed, 9 Sep 2020 11:28:54 +0700 Subject: [PATCH 04/26] Specify explicit API visbility, minor refactoring (error handling, etc.) --- examples/build.gradle.kts | 2 +- .../kmath/operations/NumberAlgebra.kt | 222 +++++++++--------- .../kmath/structures/BoxingNDField.kt | 22 +- .../scientifik/kmath/structures/LongBuffer.kt | 1 - .../kmath/structures/RealBufferField.kt | 80 +++---- .../kmath/structures/ShortBuffer.kt | 14 +- .../kmath/structures/Structure1D.kt | 10 +- .../scientifik/kmath/operations/BigNumbers.kt | 40 ++-- .../kmath/chains/BlockingIntChain.kt | 6 +- .../kmath/chains/BlockingRealChain.kt | 6 +- .../scientifik/kmath/chains/flowExtra.kt | 11 +- .../scientifik/kmath/streaming/BufferFlow.kt | 22 +- .../scientifik/kmath/streaming/RingBuffer.kt | 30 +-- .../scientifik/kmath/dimensions/Wrappers.kt | 22 +- .../scientifik/kmath/real/RealVector.kt | 27 +-- .../scientifik/kmath/real/realBuffer.kt | 2 +- .../scientifik/kmath/real/realMatrix.kt | 8 +- .../scientifik/kmath/functions/Polynomial.kt | 6 +- .../scientifik/kmath/functions/functions.kt | 3 +- .../kmath/interpolation/SplineInterpolator.kt | 9 +- .../scientifik/kmath/histogram/Counters.kt | 22 +- .../scientifik/kmath/histogram/Histogram.kt | 30 ++- .../kmath/histogram/RealHistogram.kt | 69 +++--- .../histogram/MultivariateHistogramTest.kt | 2 +- .../scientifik/kmath/histogram/Counters.kt | 28 ++- .../scientifik/kmath/histogram/Counters.kt | 4 +- .../kmath/histogram/UnivariateHistogram.kt | 41 ++-- .../scientifik/kmath/prob/Distribution.kt | 23 +- .../scientifik/kmath/prob/distributions.kt | 51 ++-- settings.gradle.kts | 3 +- 30 files changed, 401 insertions(+), 415 deletions(-) diff --git a/examples/build.gradle.kts b/examples/build.gradle.kts index 9f173a046..2c51574e5 100644 --- a/examples/build.gradle.kts +++ b/examples/build.gradle.kts @@ -20,7 +20,7 @@ repositories { sourceSets.register("benchmarks") dependencies { - implementation(project(":kmath-ast")) +// implementation(project(":kmath-ast")) implementation(project(":kmath-core")) implementation(project(":kmath-coroutines")) implementation(project(":kmath-commons")) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt index 052e32bb9..150a0d582 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt @@ -1,6 +1,5 @@ package scientifik.kmath.operations -import scientifik.kmath.operations.RealField.pow import kotlin.math.abs import kotlin.math.pow as kpow @@ -13,11 +12,10 @@ public interface ExtendedFieldOperations : HyperbolicOperations, PowerOperations, ExponentialOperations { + public override fun tan(arg: T): T = sin(arg) / cos(arg) + public override fun tanh(arg: T): T = sinh(arg) / cosh(arg) - override fun tan(arg: T): T = sin(arg) / cos(arg) - override fun tanh(arg: T): T = sinh(arg) / cosh(arg) - - override fun unaryOperation(operation: String, arg: T): T = when (operation) { + public override fun unaryOperation(operation: String, arg: T): T = when (operation) { TrigonometricOperations.COS_OPERATION -> cos(arg) TrigonometricOperations.SIN_OPERATION -> sin(arg) TrigonometricOperations.TAN_OPERATION -> tan(arg) @@ -37,19 +35,18 @@ public interface ExtendedFieldOperations : } } - /** * Advanced Number-like field that implements basic operations. */ public interface ExtendedField : ExtendedFieldOperations, Field { - override fun sinh(arg: T): T = (exp(arg) - exp(-arg)) / 2 - override fun cosh(arg: T): T = (exp(arg) + exp(-arg)) / 2 - override fun tanh(arg: T): T = (exp(arg) - exp(-arg)) / (exp(-arg) + exp(arg)) - override fun asinh(arg: T): T = ln(sqrt(arg * arg + one) + arg) - override fun acosh(arg: T): T = ln(arg + sqrt((arg - one) * (arg + one))) - override fun atanh(arg: T): T = (ln(arg + one) - ln(one - arg)) / 2 + public override fun sinh(arg: T): T = (exp(arg) - exp(-arg)) / 2 + public override fun cosh(arg: T): T = (exp(arg) + exp(-arg)) / 2 + public override fun tanh(arg: T): T = (exp(arg) - exp(-arg)) / (exp(-arg) + exp(arg)) + public override fun asinh(arg: T): T = ln(sqrt(arg * arg + one) + arg) + public override fun acosh(arg: T): T = ln(arg + sqrt((arg - one) * (arg + one))) + public override fun atanh(arg: T): T = (ln(arg + one) - ln(one - arg)) / 2 - override fun rightSideNumberOperation(operation: String, left: T, right: Number): T = when (operation) { + public override fun rightSideNumberOperation(operation: String, left: T, right: Number): T = when (operation) { PowerOperations.POW_OPERATION -> power(left, right) else -> super.rightSideNumberOperation(operation, left, right) } @@ -63,12 +60,11 @@ public interface ExtendedField : ExtendedFieldOperations, Field { * TODO inline does not work due to compiler bug. Waiting for fix for KT-27586 */ public inline class Real(public val value: Double) : FieldElement { - override val context: RealField + public override val context: RealField get() = RealField - override fun unwrap(): Double = value - - override fun Double.wrap(): Real = Real(value) + public override fun unwrap(): Double = value + public override fun Double.wrap(): Real = Real(value) public companion object } @@ -78,49 +74,49 @@ public inline class Real(public val value: Double) : FieldElement, Norm { - override val zero: Double + public override val zero: Double get() = 0.0 - override val one: Double + public override val one: Double get() = 1.0 - override fun binaryOperation(operation: String, left: Double, right: Double): Double = when (operation) { + public override fun binaryOperation(operation: String, left: Double, right: Double): Double = when (operation) { PowerOperations.POW_OPERATION -> left pow right else -> super.binaryOperation(operation, left, right) } - override inline fun add(a: Double, b: Double): Double = a + b - override inline fun multiply(a: Double, k: Number): Double = a * k.toDouble() + public override inline fun add(a: Double, b: Double): Double = a + b + public override inline fun multiply(a: Double, k: Number): Double = a * k.toDouble() - override inline fun multiply(a: Double, b: Double): Double = a * b + public override inline fun multiply(a: Double, b: Double): Double = a * b - override inline fun divide(a: Double, b: Double): Double = a / b + public override inline fun divide(a: Double, b: Double): Double = a / b - override inline fun sin(arg: Double): Double = kotlin.math.sin(arg) - override inline fun cos(arg: Double): Double = kotlin.math.cos(arg) - override inline fun tan(arg: Double): Double = kotlin.math.tan(arg) - override inline fun acos(arg: Double): Double = kotlin.math.acos(arg) - override inline fun asin(arg: Double): Double = kotlin.math.asin(arg) - override inline fun atan(arg: Double): Double = kotlin.math.atan(arg) + public override inline fun sin(arg: Double): Double = kotlin.math.sin(arg) + public override inline fun cos(arg: Double): Double = kotlin.math.cos(arg) + public override inline fun tan(arg: Double): Double = kotlin.math.tan(arg) + public override inline fun acos(arg: Double): Double = kotlin.math.acos(arg) + public override inline fun asin(arg: Double): Double = kotlin.math.asin(arg) + public override inline fun atan(arg: Double): Double = kotlin.math.atan(arg) - override inline fun sinh(arg: Double): Double = kotlin.math.sinh(arg) - override inline fun cosh(arg: Double): Double = kotlin.math.cosh(arg) - override inline fun tanh(arg: Double): Double = kotlin.math.tanh(arg) - override inline fun asinh(arg: Double): Double = kotlin.math.asinh(arg) - override inline fun acosh(arg: Double): Double = kotlin.math.acosh(arg) - override inline fun atanh(arg: Double): Double = kotlin.math.atanh(arg) + public override inline fun sinh(arg: Double): Double = kotlin.math.sinh(arg) + public override inline fun cosh(arg: Double): Double = kotlin.math.cosh(arg) + public override inline fun tanh(arg: Double): Double = kotlin.math.tanh(arg) + public override inline fun asinh(arg: Double): Double = kotlin.math.asinh(arg) + public override inline fun acosh(arg: Double): Double = kotlin.math.acosh(arg) + public override inline fun atanh(arg: Double): Double = kotlin.math.atanh(arg) - override inline fun power(arg: Double, pow: Number): Double = arg.kpow(pow.toDouble()) - override inline fun exp(arg: Double): Double = kotlin.math.exp(arg) - override inline fun ln(arg: Double): Double = kotlin.math.ln(arg) + public override inline fun power(arg: Double, pow: Number): Double = arg.kpow(pow.toDouble()) + public override inline fun exp(arg: Double): Double = kotlin.math.exp(arg) + public override inline fun ln(arg: Double): Double = kotlin.math.ln(arg) - override inline fun norm(arg: Double): Double = abs(arg) + public override inline fun norm(arg: Double): Double = abs(arg) - override inline fun Double.unaryMinus(): Double = -this - override inline fun Double.plus(b: Double): Double = this + b - override inline fun Double.minus(b: Double): Double = this - b - override inline fun Double.times(b: Double): Double = this * b - override inline fun Double.div(b: Double): Double = this / b + public override inline fun Double.unaryMinus(): Double = -this + public override inline fun Double.plus(b: Double): Double = this + b + public override inline fun Double.minus(b: Double): Double = this - b + public override inline fun Double.times(b: Double): Double = this * b + public override inline fun Double.div(b: Double): Double = this / b } /** @@ -128,49 +124,49 @@ public object RealField : ExtendedField, Norm { */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public object FloatField : ExtendedField, Norm { - override val zero: Float + public override val zero: Float get() = 0.0f - override val one: Float + public override val one: Float get() = 1.0f - override fun binaryOperation(operation: String, left: Float, right: Float): Float = when (operation) { + public override fun binaryOperation(operation: String, left: Float, right: Float): Float = when (operation) { PowerOperations.POW_OPERATION -> left pow right else -> super.binaryOperation(operation, left, right) } - override inline fun add(a: Float, b: Float): Float = a + b - override inline fun multiply(a: Float, k: Number): Float = a * k.toFloat() + public override inline fun add(a: Float, b: Float): Float = a + b + public override inline fun multiply(a: Float, k: Number): Float = a * k.toFloat() - override inline fun multiply(a: Float, b: Float): Float = a * b + public override inline fun multiply(a: Float, b: Float): Float = a * b - override inline fun divide(a: Float, b: Float): Float = a / b + public override inline fun divide(a: Float, b: Float): Float = a / b - override inline fun sin(arg: Float): Float = kotlin.math.sin(arg) - override inline fun cos(arg: Float): Float = kotlin.math.cos(arg) - override inline fun tan(arg: Float): Float = kotlin.math.tan(arg) - override inline fun acos(arg: Float): Float = kotlin.math.acos(arg) - override inline fun asin(arg: Float): Float = kotlin.math.asin(arg) - override inline fun atan(arg: Float): Float = kotlin.math.atan(arg) + public override inline fun sin(arg: Float): Float = kotlin.math.sin(arg) + public override inline fun cos(arg: Float): Float = kotlin.math.cos(arg) + public override inline fun tan(arg: Float): Float = kotlin.math.tan(arg) + public override inline fun acos(arg: Float): Float = kotlin.math.acos(arg) + public override inline fun asin(arg: Float): Float = kotlin.math.asin(arg) + public override inline fun atan(arg: Float): Float = kotlin.math.atan(arg) - override inline fun sinh(arg: Float): Float = kotlin.math.sinh(arg) - override inline fun cosh(arg: Float): Float = kotlin.math.cosh(arg) - override inline fun tanh(arg: Float): Float = kotlin.math.tanh(arg) - override inline fun asinh(arg: Float): Float = kotlin.math.asinh(arg) - override inline fun acosh(arg: Float): Float = kotlin.math.acosh(arg) - override inline fun atanh(arg: Float): Float = kotlin.math.atanh(arg) + public override inline fun sinh(arg: Float): Float = kotlin.math.sinh(arg) + public override inline fun cosh(arg: Float): Float = kotlin.math.cosh(arg) + public override inline fun tanh(arg: Float): Float = kotlin.math.tanh(arg) + public override inline fun asinh(arg: Float): Float = kotlin.math.asinh(arg) + public override inline fun acosh(arg: Float): Float = kotlin.math.acosh(arg) + public override inline fun atanh(arg: Float): Float = kotlin.math.atanh(arg) - override inline fun power(arg: Float, pow: Number): Float = arg.kpow(pow.toFloat()) - override inline fun exp(arg: Float): Float = kotlin.math.exp(arg) - override inline fun ln(arg: Float): Float = kotlin.math.ln(arg) + public override inline fun power(arg: Float, pow: Number): Float = arg.kpow(pow.toFloat()) + public override inline fun exp(arg: Float): Float = kotlin.math.exp(arg) + public override inline fun ln(arg: Float): Float = kotlin.math.ln(arg) - override inline fun norm(arg: Float): Float = abs(arg) + public override inline fun norm(arg: Float): Float = abs(arg) - override inline fun Float.unaryMinus(): Float = -this - override inline fun Float.plus(b: Float): Float = this + b - override inline fun Float.minus(b: Float): Float = this - b - override inline fun Float.times(b: Float): Float = this * b - override inline fun Float.div(b: Float): Float = this / b + public override inline fun Float.unaryMinus(): Float = -this + public override inline fun Float.plus(b: Float): Float = this + b + public override inline fun Float.minus(b: Float): Float = this - b + public override inline fun Float.times(b: Float): Float = this * b + public override inline fun Float.div(b: Float): Float = this / b } /** @@ -178,23 +174,23 @@ public object FloatField : ExtendedField, Norm { */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public object IntRing : Ring, Norm { - override val zero: Int + public override val zero: Int get() = 0 - override val one: Int + public override val one: Int get() = 1 - override inline fun add(a: Int, b: Int): Int = a + b - override inline fun multiply(a: Int, k: Number): Int = k.toInt() * a + public override inline fun add(a: Int, b: Int): Int = a + b + public override inline fun multiply(a: Int, k: Number): Int = k.toInt() * a - override inline fun multiply(a: Int, b: Int): Int = a * b + public override inline fun multiply(a: Int, b: Int): Int = a * b - override inline fun norm(arg: Int): Int = abs(arg) + public override inline fun norm(arg: Int): Int = abs(arg) - override inline fun Int.unaryMinus(): Int = -this - override inline fun Int.plus(b: Int): Int = this + b - override inline fun Int.minus(b: Int): Int = this - b - override inline fun Int.times(b: Int): Int = this * b + public override inline fun Int.unaryMinus(): Int = -this + public override inline fun Int.plus(b: Int): Int = this + b + public override inline fun Int.minus(b: Int): Int = this - b + public override inline fun Int.times(b: Int): Int = this * b } /** @@ -202,23 +198,23 @@ public object IntRing : Ring, Norm { */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public object ShortRing : Ring, Norm { - override val zero: Short + public override val zero: Short get() = 0 - override val one: Short + public override val one: Short get() = 1 - override inline fun add(a: Short, b: Short): Short = (a + b).toShort() - override inline fun multiply(a: Short, k: Number): Short = (a * k.toShort()).toShort() + public override inline fun add(a: Short, b: Short): Short = (a + b).toShort() + public override inline fun multiply(a: Short, k: Number): Short = (a * k.toShort()).toShort() - override inline fun multiply(a: Short, b: Short): Short = (a * b).toShort() + public override inline fun multiply(a: Short, b: Short): Short = (a * b).toShort() - override fun norm(arg: Short): Short = if (arg > 0) arg else (-arg).toShort() + public override fun norm(arg: Short): Short = if (arg > 0) arg else (-arg).toShort() - override inline fun Short.unaryMinus(): Short = (-this).toShort() - override inline fun Short.plus(b: Short): Short = (this + b).toShort() - override inline fun Short.minus(b: Short): Short = (this - b).toShort() - override inline fun Short.times(b: Short): Short = (this * b).toShort() + public override inline fun Short.unaryMinus(): Short = (-this).toShort() + public override inline fun Short.plus(b: Short): Short = (this + b).toShort() + public override inline fun Short.minus(b: Short): Short = (this - b).toShort() + public override inline fun Short.times(b: Short): Short = (this * b).toShort() } /** @@ -226,23 +222,23 @@ public object ShortRing : Ring, Norm { */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public object ByteRing : Ring, Norm { - override val zero: Byte + public override val zero: Byte get() = 0 - override val one: Byte + public override val one: Byte get() = 1 - override inline fun add(a: Byte, b: Byte): Byte = (a + b).toByte() - override inline fun multiply(a: Byte, k: Number): Byte = (a * k.toByte()).toByte() + public override inline fun add(a: Byte, b: Byte): Byte = (a + b).toByte() + public override inline fun multiply(a: Byte, k: Number): Byte = (a * k.toByte()).toByte() - override inline fun multiply(a: Byte, b: Byte): Byte = (a * b).toByte() + public override inline fun multiply(a: Byte, b: Byte): Byte = (a * b).toByte() - override fun norm(arg: Byte): Byte = if (arg > 0) arg else (-arg).toByte() + public override fun norm(arg: Byte): Byte = if (arg > 0) arg else (-arg).toByte() - override inline fun Byte.unaryMinus(): Byte = (-this).toByte() - override inline fun Byte.plus(b: Byte): Byte = (this + b).toByte() - override inline fun Byte.minus(b: Byte): Byte = (this - b).toByte() - override inline fun Byte.times(b: Byte): Byte = (this * b).toByte() + public override inline fun Byte.unaryMinus(): Byte = (-this).toByte() + public override inline fun Byte.plus(b: Byte): Byte = (this + b).toByte() + public override inline fun Byte.minus(b: Byte): Byte = (this - b).toByte() + public override inline fun Byte.times(b: Byte): Byte = (this * b).toByte() } /** @@ -250,21 +246,21 @@ public object ByteRing : Ring, Norm { */ @Suppress("EXTENSION_SHADOWED_BY_MEMBER", "OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public object LongRing : Ring, Norm { - override val zero: Long + public override val zero: Long get() = 0 - override val one: Long + public override val one: Long get() = 1 - override inline fun add(a: Long, b: Long): Long = a + b - override inline fun multiply(a: Long, k: Number): Long = a * k.toLong() + public override inline fun add(a: Long, b: Long): Long = a + b + public override inline fun multiply(a: Long, k: Number): Long = a * k.toLong() - override inline fun multiply(a: Long, b: Long): Long = a * b + public override inline fun multiply(a: Long, b: Long): Long = a * b - override fun norm(arg: Long): Long = abs(arg) + public override fun norm(arg: Long): Long = abs(arg) - override inline fun Long.unaryMinus(): Long = (-this) - override inline fun Long.plus(b: Long): Long = (this + b) - override inline fun Long.minus(b: Long): Long = (this - b) - override inline fun Long.times(b: Long): Long = (this * b) + public override inline fun Long.unaryMinus(): Long = (-this) + public override inline fun Long.plus(b: Long): Long = (this + b) + public override inline fun Long.minus(b: Long): Long = (this - b) + public override inline fun Long.times(b: Long): Long = (this * b) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt index 5950532e1..a258c7a2f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt @@ -4,27 +4,27 @@ import scientifik.kmath.operations.Field import scientifik.kmath.operations.FieldElement public class BoxingNDField>( - override val shape: IntArray, - override val elementContext: F, + public override val shape: IntArray, + public override val elementContext: F, public val bufferFactory: BufferFactory ) : BufferedNDField { - override val zero: BufferedNDFieldElement by lazy { produce { zero } } - override val one: BufferedNDFieldElement by lazy { produce { one } } - override val strides: Strides = DefaultStrides(shape) + public override val zero: BufferedNDFieldElement by lazy { produce { zero } } + public override val one: BufferedNDFieldElement by lazy { produce { one } } + public override val strides: Strides = DefaultStrides(shape) public fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer = bufferFactory(size, initializer) - override fun check(vararg elements: NDBuffer) { + public override fun check(vararg elements: NDBuffer) { check(elements.all { it.strides == strides }) { "Element strides are not the same as context strides" } } - override fun produce(initializer: F.(IntArray) -> T): BufferedNDFieldElement = + public override fun produce(initializer: F.(IntArray) -> T): BufferedNDFieldElement = BufferedNDFieldElement( this, buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }) - override fun map(arg: NDBuffer, transform: F.(T) -> T): BufferedNDFieldElement { + public override fun map(arg: NDBuffer, transform: F.(T) -> T): BufferedNDFieldElement { check(arg) return BufferedNDFieldElement( @@ -36,7 +36,7 @@ public class BoxingNDField>( } - override fun mapIndexed( + public override fun mapIndexed( arg: NDBuffer, transform: F.(index: IntArray, T) -> T ): BufferedNDFieldElement { @@ -55,7 +55,7 @@ public class BoxingNDField>( // return BufferedNDFieldElement(this, buffer) } - override fun combine( + public override fun combine( a: NDBuffer, b: NDBuffer, transform: F.(T, T) -> T @@ -66,7 +66,7 @@ public class BoxingNDField>( buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) }) } - override fun NDBuffer.toElement(): FieldElement, *, out BufferedNDField> = + public override fun NDBuffer.toElement(): FieldElement, *, out BufferedNDField> = BufferedNDFieldElement(this@BoxingNDField, buffer) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt index 0fe975e42..f6c3421cd 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt @@ -21,7 +21,6 @@ public inline class LongBuffer(public val array: LongArray) : MutableBuffer = LongBuffer(array.copyOf()) - } /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt index db79c6b78..363ce0275 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt @@ -8,7 +8,7 @@ import kotlin.math.* * [ExtendedFieldOperations] over [RealBuffer]. */ public object RealBufferFieldOperations : ExtendedFieldOperations> { - override fun add(a: Buffer, b: Buffer): RealBuffer { + public override fun add(a: Buffer, b: Buffer): RealBuffer { require(b.size == a.size) { "The size of the first buffer ${a.size} should be the same as for second one: ${b.size} " } @@ -20,7 +20,7 @@ public object RealBufferFieldOperations : ExtendedFieldOperations } else RealBuffer(DoubleArray(a.size) { a[it] + b[it] }) } - override fun multiply(a: Buffer, k: Number): RealBuffer { + public override fun multiply(a: Buffer, k: Number): RealBuffer { val kValue = k.toDouble() return if (a is RealBuffer) { @@ -29,7 +29,7 @@ public object RealBufferFieldOperations : ExtendedFieldOperations } else RealBuffer(DoubleArray(a.size) { a[it] * kValue }) } - override fun multiply(a: Buffer, b: Buffer): RealBuffer { + public override fun multiply(a: Buffer, b: Buffer): RealBuffer { require(b.size == a.size) { "The size of the first buffer ${a.size} should be the same as for second one: ${b.size} " } @@ -42,7 +42,7 @@ public object RealBufferFieldOperations : ExtendedFieldOperations RealBuffer(DoubleArray(a.size) { a[it] * b[it] }) } - override fun divide(a: Buffer, b: Buffer): RealBuffer { + public override fun divide(a: Buffer, b: Buffer): RealBuffer { require(b.size == a.size) { "The size of the first buffer ${a.size} should be the same as for second one: ${b.size} " } @@ -54,87 +54,87 @@ public object RealBufferFieldOperations : ExtendedFieldOperations } else RealBuffer(DoubleArray(a.size) { a[it] / b[it] }) } - override fun sin(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun sin(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { sin(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { sin(arg[it]) }) - override fun cos(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun cos(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { cos(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { cos(arg[it]) }) - override fun tan(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun tan(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { tan(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { tan(arg[it]) }) - override fun asin(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun asin(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { asin(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { asin(arg[it]) }) - override fun acos(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun acos(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { acos(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { acos(arg[it]) }) - override fun atan(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun atan(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { atan(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { atan(arg[it]) }) - override fun sinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun sinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { sinh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { sinh(arg[it]) }) - override fun cosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun cosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { cosh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { cosh(arg[it]) }) - override fun tanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun tanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { tanh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { tanh(arg[it]) }) - override fun asinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun asinh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { asinh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { asinh(arg[it]) }) - override fun acosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun acosh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { acosh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { acosh(arg[it]) }) - override fun atanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun atanh(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { atanh(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { atanh(arg[it]) }) - override fun power(arg: Buffer, pow: Number): RealBuffer = if (arg is RealBuffer) { + public override fun power(arg: Buffer, pow: Number): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { array[it].pow(pow.toDouble()) }) } else RealBuffer(DoubleArray(arg.size) { arg[it].pow(pow.toDouble()) }) - override fun exp(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun exp(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { exp(array[it]) }) } else RealBuffer(DoubleArray(arg.size) { exp(arg[it]) }) - override fun ln(arg: Buffer): RealBuffer = if (arg is RealBuffer) { + public override fun ln(arg: Buffer): RealBuffer = if (arg is RealBuffer) { val array = arg.array RealBuffer(DoubleArray(arg.size) { ln(array[it]) }) } else @@ -147,100 +147,100 @@ public object RealBufferFieldOperations : ExtendedFieldOperations * @property size the size of buffers to operate on. */ public class RealBufferField(public val size: Int) : ExtendedField> { - override val zero: Buffer by lazy { RealBuffer(size) { 0.0 } } - override val one: Buffer by lazy { RealBuffer(size) { 1.0 } } + public override val zero: Buffer by lazy { RealBuffer(size) { 0.0 } } + public override val one: Buffer by lazy { RealBuffer(size) { 1.0 } } - override fun add(a: Buffer, b: Buffer): RealBuffer { + public override fun add(a: Buffer, b: Buffer): RealBuffer { require(a.size == size) { "The buffer size ${a.size} does not match context size $size" } return RealBufferFieldOperations.add(a, b) } - override fun multiply(a: Buffer, k: Number): RealBuffer { + public override fun multiply(a: Buffer, k: Number): RealBuffer { require(a.size == size) { "The buffer size ${a.size} does not match context size $size" } return RealBufferFieldOperations.multiply(a, k) } - override fun multiply(a: Buffer, b: Buffer): RealBuffer { + public override fun multiply(a: Buffer, b: Buffer): RealBuffer { require(a.size == size) { "The buffer size ${a.size} does not match context size $size" } return RealBufferFieldOperations.multiply(a, b) } - override fun divide(a: Buffer, b: Buffer): RealBuffer { + public override fun divide(a: Buffer, b: Buffer): RealBuffer { require(a.size == size) { "The buffer size ${a.size} does not match context size $size" } return RealBufferFieldOperations.divide(a, b) } - override fun sin(arg: Buffer): RealBuffer { + public override fun sin(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.sin(arg) } - override fun cos(arg: Buffer): RealBuffer { + public override fun cos(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.cos(arg) } - override fun tan(arg: Buffer): RealBuffer { + public override fun tan(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.tan(arg) } - override fun asin(arg: Buffer): RealBuffer { + public override fun asin(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.asin(arg) } - override fun acos(arg: Buffer): RealBuffer { + public override fun acos(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.acos(arg) } - override fun atan(arg: Buffer): RealBuffer { + public override fun atan(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.atan(arg) } - override fun sinh(arg: Buffer): RealBuffer { + public override fun sinh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.sinh(arg) } - override fun cosh(arg: Buffer): RealBuffer { + public override fun cosh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.cosh(arg) } - override fun tanh(arg: Buffer): RealBuffer { + public override fun tanh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.tanh(arg) } - override fun asinh(arg: Buffer): RealBuffer { + public override fun asinh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.asinh(arg) } - override fun acosh(arg: Buffer): RealBuffer { + public override fun acosh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.acosh(arg) } - override fun atanh(arg: Buffer): RealBuffer { + public override fun atanh(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.atanh(arg) } - override fun power(arg: Buffer, pow: Number): RealBuffer { + public override fun power(arg: Buffer, pow: Number): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.power(arg, pow) } - override fun exp(arg: Buffer): RealBuffer { + public override fun exp(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.exp(arg) } - override fun ln(arg: Buffer): RealBuffer { + public override fun ln(arg: Buffer): RealBuffer { require(arg.size == size) { "The buffer size ${arg.size} does not match context size $size" } return RealBufferFieldOperations.ln(arg) } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt index d1a725556..de26da460 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt @@ -1,25 +1,21 @@ package scientifik.kmath.structures -import kotlin.contracts.contract - /** * Specialized [MutableBuffer] implementation over [ShortArray]. * * @property array the underlying array. */ public inline class ShortBuffer(public val array: ShortArray) : MutableBuffer { - override val size: Int get() = array.size + public override val size: Int get() = array.size - override operator fun get(index: Int): Short = array[index] + public override operator fun get(index: Int): Short = array[index] - override operator fun set(index: Int, value: Short) { + public override operator fun set(index: Int, value: Short) { array[index] = value } - override operator fun iterator(): ShortIterator = array.iterator() - - override fun copy(): MutableBuffer = - ShortBuffer(array.copyOf()) + public override operator fun iterator(): ShortIterator = array.iterator() + public override fun copy(): MutableBuffer = ShortBuffer(array.copyOf()) } /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt index 22d0c4750..72602695f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt @@ -4,25 +4,24 @@ package scientifik.kmath.structures * A structure that is guaranteed to be one-dimensional */ public interface Structure1D : NDStructure, Buffer { - override val dimension: Int get() = 1 + public override val dimension: Int get() = 1 - override operator fun get(index: IntArray): T { + public override operator fun get(index: IntArray): T { require(index.size == 1) { "Index dimension mismatch. Expected 1 but found ${index.size}" } return get(index[0]) } - override operator fun iterator(): Iterator = (0 until size).asSequence().map(::get).iterator() + public override operator fun iterator(): Iterator = (0 until size).asSequence().map(::get).iterator() } /** * A 1D wrapper for nd-structure */ -private inline class Structure1DWrapper(val structure: NDStructure) : Structure1D { +private inline class Structure1DWrapper(public val structure: NDStructure) : Structure1D { override val shape: IntArray get() = structure.shape override val size: Int get() = structure.shape[0] override operator fun get(index: Int): T = structure[index] - override fun elements(): Sequence> = structure.elements() } @@ -32,7 +31,6 @@ private inline class Structure1DWrapper(val structure: NDStructure) : Stru */ private inline class Buffer1DWrapper(val buffer: Buffer) : Structure1D { override val shape: IntArray get() = intArrayOf(buffer.size) - override val size: Int get() = buffer.size override fun elements(): Sequence> = diff --git a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt b/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt index e5ec374c9..7310dcc68 100644 --- a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt +++ b/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt @@ -8,19 +8,19 @@ import java.math.MathContext * A field over [BigInteger]. */ public object JBigIntegerField : Field { - override val zero: BigInteger + public override val zero: BigInteger get() = BigInteger.ZERO - override val one: BigInteger + public override val one: BigInteger get() = BigInteger.ONE - override fun number(value: Number): BigInteger = BigInteger.valueOf(value.toLong()) - override fun divide(a: BigInteger, b: BigInteger): BigInteger = a.div(b) - override fun add(a: BigInteger, b: BigInteger): BigInteger = a.add(b) - override operator fun BigInteger.minus(b: BigInteger): BigInteger = subtract(b) - override fun multiply(a: BigInteger, k: Number): BigInteger = a.multiply(k.toInt().toBigInteger()) - override fun multiply(a: BigInteger, b: BigInteger): BigInteger = a.multiply(b) - override operator fun BigInteger.unaryMinus(): BigInteger = negate() + public override fun number(value: Number): BigInteger = BigInteger.valueOf(value.toLong()) + public override fun divide(a: BigInteger, b: BigInteger): BigInteger = a.div(b) + public override fun add(a: BigInteger, b: BigInteger): BigInteger = a.add(b) + public override operator fun BigInteger.minus(b: BigInteger): BigInteger = subtract(b) + public override fun multiply(a: BigInteger, k: Number): BigInteger = a.multiply(k.toInt().toBigInteger()) + public override fun multiply(a: BigInteger, b: BigInteger): BigInteger = a.multiply(b) + public override operator fun BigInteger.unaryMinus(): BigInteger = negate() } /** @@ -31,24 +31,24 @@ public object JBigIntegerField : Field { public abstract class JBigDecimalFieldBase internal constructor(public val mathContext: MathContext = MathContext.DECIMAL64) : Field, PowerOperations { - override val zero: BigDecimal + public override val zero: BigDecimal get() = BigDecimal.ZERO - override val one: BigDecimal + public override val one: BigDecimal get() = BigDecimal.ONE - override fun add(a: BigDecimal, b: BigDecimal): BigDecimal = a.add(b) - override operator fun BigDecimal.minus(b: BigDecimal): BigDecimal = subtract(b) - override fun number(value: Number): BigDecimal = BigDecimal.valueOf(value.toDouble()) + public override fun add(a: BigDecimal, b: BigDecimal): BigDecimal = a.add(b) + public override operator fun BigDecimal.minus(b: BigDecimal): BigDecimal = subtract(b) + public override fun number(value: Number): BigDecimal = BigDecimal.valueOf(value.toDouble()) - override fun multiply(a: BigDecimal, k: Number): BigDecimal = + public override fun multiply(a: BigDecimal, k: Number): BigDecimal = a.multiply(k.toDouble().toBigDecimal(mathContext), mathContext) - override fun multiply(a: BigDecimal, b: BigDecimal): BigDecimal = a.multiply(b, mathContext) - override fun divide(a: BigDecimal, b: BigDecimal): BigDecimal = a.divide(b, mathContext) - override fun power(arg: BigDecimal, pow: Number): BigDecimal = arg.pow(pow.toInt(), mathContext) - override fun sqrt(arg: BigDecimal): BigDecimal = arg.sqrt(mathContext) - override operator fun BigDecimal.unaryMinus(): BigDecimal = negate(mathContext) + public override fun multiply(a: BigDecimal, b: BigDecimal): BigDecimal = a.multiply(b, mathContext) + public override fun divide(a: BigDecimal, b: BigDecimal): BigDecimal = a.divide(b, mathContext) + public override fun power(arg: BigDecimal, pow: Number): BigDecimal = arg.pow(pow.toInt(), mathContext) + public override fun sqrt(arg: BigDecimal): BigDecimal = arg.sqrt(mathContext) + public override operator fun BigDecimal.unaryMinus(): BigDecimal = negate(mathContext) } /** diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt index e9b499d71..25a95273d 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt @@ -3,10 +3,10 @@ package scientifik.kmath.chains /** * Performance optimized chain for integer values */ -abstract class BlockingIntChain : Chain { - abstract fun nextInt(): Int +public abstract class BlockingIntChain : Chain { + public abstract fun nextInt(): Int override suspend fun next(): Int = nextInt() - fun nextBlock(size: Int): IntArray = IntArray(size) { nextInt() } + public fun nextBlock(size: Int): IntArray = IntArray(size) { nextInt() } } diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt index ab819d327..867fee19f 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt @@ -3,10 +3,10 @@ package scientifik.kmath.chains /** * Performance optimized chain for real values */ -abstract class BlockingRealChain : Chain { - abstract fun nextDouble(): Double +public abstract class BlockingRealChain : Chain { + public abstract fun nextDouble(): Double override suspend fun next(): Double = nextDouble() - fun nextBlock(size: Int): DoubleArray = DoubleArray(size) { nextDouble() } + public fun nextBlock(size: Int): DoubleArray = DoubleArray(size) { nextDouble() } } diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt index 5db660c39..389e0b6db 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt @@ -3,20 +3,19 @@ package scientifik.kmath.chains import kotlinx.coroutines.ExperimentalCoroutinesApi import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.map +import kotlinx.coroutines.flow.runningReduce import kotlinx.coroutines.flow.scan -import kotlinx.coroutines.flow.scanReduce import scientifik.kmath.operations.Space import scientifik.kmath.operations.SpaceOperations import scientifik.kmath.operations.invoke @ExperimentalCoroutinesApi -fun Flow.cumulativeSum(space: SpaceOperations): Flow = space { - scanReduce { sum: T, element: T -> sum + element } -} +public fun Flow.cumulativeSum(space: SpaceOperations): Flow = + space { runningReduce { sum, element -> sum + element } } @ExperimentalCoroutinesApi -fun Flow.mean(space: Space): Flow = space { - class Accumulator(var sum: T, var num: Int) +public fun Flow.mean(space: Space): Flow = space { + data class Accumulator(var sum: T, var num: Int) scan(Accumulator(zero, 0)) { sum, element -> sum.apply { diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt index 9b7e82da5..ae1860974 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt @@ -11,18 +11,18 @@ import scientifik.kmath.structures.asBuffer /** * Create a [Flow] from buffer */ -fun Buffer.asFlow(): Flow = iterator().asFlow() +public fun Buffer.asFlow(): Flow = iterator().asFlow() /** * Flat map a [Flow] of [Buffer] into continuous [Flow] of elements */ @FlowPreview -fun Flow>.spread(): Flow = flatMapConcat { it.asFlow() } +public fun Flow>.spread(): Flow = flatMapConcat { it.asFlow() } /** * Collect incoming flow into fixed size chunks */ -fun Flow.chunked(bufferSize: Int, bufferFactory: BufferFactory): Flow> = flow { +public fun Flow.chunked(bufferSize: Int, bufferFactory: BufferFactory): Flow> = flow { require(bufferSize > 0) { "Resulting chunk size must be more than zero" } val list = ArrayList(bufferSize) var counter = 0 @@ -30,6 +30,7 @@ fun Flow.chunked(bufferSize: Int, bufferFactory: BufferFactory): Flow< this@chunked.collect { element -> list.add(element) counter++ + if (counter == bufferSize) { val buffer = bufferFactory(bufferSize) { list[it] } emit(buffer) @@ -37,15 +38,14 @@ fun Flow.chunked(bufferSize: Int, bufferFactory: BufferFactory): Flow< counter = 0 } } - if (counter > 0) { - emit(bufferFactory(counter) { list[it] }) - } + + if (counter > 0) emit(bufferFactory(counter) { list[it] }) } /** * Specialized flow chunker for real buffer */ -fun Flow.chunked(bufferSize: Int): Flow = flow { +public fun Flow.chunked(bufferSize: Int): Flow = flow { require(bufferSize > 0) { "Resulting chunk size must be more than zero" } if (this@chunked is BlockingRealChain) { @@ -66,9 +66,8 @@ fun Flow.chunked(bufferSize: Int): Flow = flow { counter = 0 } } - if (counter > 0) { - emit(RealBuffer(counter) { array[it] }) - } + + if (counter > 0) emit(RealBuffer(counter) { array[it] }) } } @@ -76,9 +75,10 @@ fun Flow.chunked(bufferSize: Int): Flow = flow { * Map a flow to a moving window buffer. The window step is one. * In order to get different steps, one could use skip operation. */ -fun Flow.windowed(window: Int): Flow> = flow { +public fun Flow.windowed(window: Int): Flow> = flow { require(window > 1) { "Window size must be more than one" } val ringBuffer = RingBuffer.boxing(window) + this@windowed.collect { element -> ringBuffer.push(element) emit(ringBuffer.snapshot()) diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt index f1c0bfc6a..b30100d43 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt @@ -10,28 +10,28 @@ import scientifik.kmath.structures.VirtualBuffer * Thread-safe ring buffer */ @Suppress("UNCHECKED_CAST") -class RingBuffer( +public class RingBuffer( private val buffer: MutableBuffer, private var startIndex: Int = 0, size: Int = 0 ) : Buffer { private val mutex: Mutex = Mutex() - override var size: Int = size + public override var size: Int = size private set - override operator fun get(index: Int): T { + public override operator fun get(index: Int): T { require(index >= 0) { "Index must be positive" } require(index < size) { "Index $index is out of circular buffer size $size" } return buffer[startIndex.forward(index)] as T } - fun isFull(): Boolean = size == buffer.size + public fun isFull(): Boolean = size == buffer.size /** * Iterator could provide wrong results if buffer is changed in initialization (iteration is safe) */ - override operator fun iterator(): Iterator = object : AbstractIterator() { + public override operator fun iterator(): Iterator = object : AbstractIterator() { private var count = size private var index = startIndex val copy = buffer.copy() @@ -48,23 +48,17 @@ class RingBuffer( /** * A safe snapshot operation */ - suspend fun snapshot(): Buffer { + public suspend fun snapshot(): Buffer { mutex.withLock { val copy = buffer.copy() - return VirtualBuffer(size) { i -> - copy[startIndex.forward(i)] as T - } + return VirtualBuffer(size) { i -> copy[startIndex.forward(i)] as T } } } - suspend fun push(element: T) { + public suspend fun push(element: T) { mutex.withLock { buffer[startIndex.forward(size)] = element - if (isFull()) { - startIndex++ - } else { - size++ - } + if (isFull()) startIndex++ else size++ } } @@ -72,8 +66,8 @@ class RingBuffer( @Suppress("NOTHING_TO_INLINE") private inline fun Int.forward(n: Int): Int = (this + n) % (buffer.size) - companion object { - inline fun build(size: Int, empty: T): RingBuffer { + public companion object { + public inline fun build(size: Int, empty: T): RingBuffer { val buffer = MutableBuffer.auto(size) { empty } as MutableBuffer return RingBuffer(buffer) } @@ -81,7 +75,7 @@ class RingBuffer( /** * Slow yet universal buffer */ - fun boxing(size: Int): RingBuffer { + public fun boxing(size: Int): RingBuffer { val buffer: MutableBuffer = MutableBuffer.boxing(size) { null } return RingBuffer(buffer) } diff --git a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt index 8ebbf47c0..120069d83 100644 --- a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt +++ b/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt @@ -118,39 +118,39 @@ public inline class DMatrixContext>(public val context: Ge other: DMatrix ): DMatrix = context { this@dot dot other }.coerce() - inline infix fun DMatrix.dot(vector: DPoint): DPoint = + public inline infix fun DMatrix.dot(vector: DPoint): DPoint = DPoint.coerceUnsafe(context { this@dot dot vector }) - inline operator fun DMatrix.times(value: T): DMatrix = + public inline operator fun DMatrix.times(value: T): DMatrix = context { this@times.times(value) }.coerce() - inline operator fun T.times(m: DMatrix): DMatrix = + public inline operator fun T.times(m: DMatrix): DMatrix = m * this - inline operator fun DMatrix.plus(other: DMatrix): DMatrix = + public inline operator fun DMatrix.plus(other: DMatrix): DMatrix = context { this@plus + other }.coerce() - inline operator fun DMatrix.minus(other: DMatrix): DMatrix = + public inline operator fun DMatrix.minus(other: DMatrix): DMatrix = context { this@minus + other }.coerce() - inline operator fun DMatrix.unaryMinus(): DMatrix = + public inline operator fun DMatrix.unaryMinus(): DMatrix = context { this@unaryMinus.unaryMinus() }.coerce() - inline fun DMatrix.transpose(): DMatrix = + public inline fun DMatrix.transpose(): DMatrix = context { (this@transpose as Matrix).transpose() }.coerce() /** * A square unit matrix */ - inline fun one(): DMatrix = produce { i, j -> + public inline fun one(): DMatrix = produce { i, j -> if (i == j) context.elementContext.one else context.elementContext.zero } - inline fun zero(): DMatrix = produce { _, _ -> + public inline fun zero(): DMatrix = produce { _, _ -> context.elementContext.zero } - companion object { - val real: DMatrixContext = DMatrixContext(MatrixContext.real) + public companion object { + public val real: DMatrixContext = DMatrixContext(MatrixContext.real) } } diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt index 811b54d7c..8c6d5fae4 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt @@ -12,39 +12,38 @@ import scientifik.kmath.structures.asBuffer import scientifik.kmath.structures.asIterable import kotlin.math.sqrt -typealias RealPoint = Point +public typealias RealPoint = Point -fun DoubleArray.asVector(): RealVector = RealVector(this.asBuffer()) -fun List.asVector(): RealVector = RealVector(this.asBuffer()) +public fun DoubleArray.asVector(): RealVector = RealVector(this.asBuffer()) +public fun List.asVector(): RealVector = RealVector(this.asBuffer()) -object VectorL2Norm : Norm, Double> { +public object VectorL2Norm : Norm, Double> { override fun norm(arg: Point): Double = sqrt(arg.asIterable().sumByDouble { it.toDouble() }) } -inline class RealVector(private val point: Point) : +public inline class RealVector(private val point: Point) : SpaceElement>, RealPoint { + public override val size: Int get() = point.size + public override val context: VectorSpace get() = space(point.size) - override val context: VectorSpace get() = space(point.size) + public override fun unwrap(): RealPoint = point - override fun unwrap(): RealPoint = point + public override fun RealPoint.wrap(): RealVector = RealVector(this) - override fun RealPoint.wrap(): RealVector = RealVector(this) - - override val size: Int get() = point.size override operator fun get(index: Int): Double = point[index] override operator fun iterator(): Iterator = point.iterator() - companion object { + public companion object { private val spaceCache: MutableMap> = hashMapOf() - inline operator fun invoke(dim: Int, initializer: (Int) -> Double): RealVector = + public inline operator fun invoke(dim: Int, initializer: (Int) -> Double): RealVector = RealVector(RealBuffer(dim, initializer)) - operator fun invoke(vararg values: Double): RealVector = values.asVector() + public operator fun invoke(vararg values: Double): RealVector = values.asVector() - fun space(dim: Int): BufferVectorSpace = spaceCache.getOrPut(dim) { + public fun space(dim: Int): BufferVectorSpace = spaceCache.getOrPut(dim) { BufferVectorSpace(dim, RealField) { size, init -> Buffer.real(size, init) } } } diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt index 82c0e86b2..480481d97 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt @@ -5,4 +5,4 @@ import scientifik.kmath.structures.RealBuffer /** * Simplified [RealBuffer] to array comparison */ -fun RealBuffer.contentEquals(vararg doubles: Double) = array.contentEquals(doubles) \ No newline at end of file +public fun RealBuffer.contentEquals(vararg doubles: Double): Boolean = array.contentEquals(doubles) diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt index 5cecafd2e..f406c0aad 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt @@ -138,11 +138,11 @@ public fun Matrix.sumByColumn(): RealBuffer = RealBuffer(colNum) { j -> } public fun Matrix.minByColumn(): RealBuffer = RealBuffer(colNum) { j -> - columns[j].asIterable().min() ?: error("Cannot produce min on empty column") + columns[j].asIterable().minOrNull() ?: error("Cannot produce min on empty column") } public fun Matrix.maxByColumn(): RealBuffer = RealBuffer(colNum) { j -> - columns[j].asIterable().max() ?: error("Cannot produce min on empty column") + columns[j].asIterable().maxOrNull() ?: error("Cannot produce min on empty column") } public fun Matrix.averageByColumn(): RealBuffer = RealBuffer(colNum) { j -> @@ -154,6 +154,6 @@ public fun Matrix.averageByColumn(): RealBuffer = RealBuffer(colNum) { j */ public fun Matrix.sum(): Double = elements().map { (_, value) -> value }.sum() -public fun Matrix.min(): Double? = elements().map { (_, value) -> value }.min() -public fun Matrix.max(): Double? = elements().map { (_, value) -> value }.max() +public fun Matrix.min(): Double? = elements().map { (_, value) -> value }.minOrNull() +public fun Matrix.max(): Double? = elements().map { (_, value) -> value }.maxOrNull() public fun Matrix.average(): Double = elements().map { (_, value) -> value }.average() diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index 25a9a9421..77196a121 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -36,8 +36,10 @@ public fun > Polynomial.value(ring: C, arg: T): T = ring /** * Represent a polynomial as a context-dependent function */ -public fun > Polynomial.asMathFunction(): MathFunction = - MathFunction { arg -> value(this, arg) } +public fun > Polynomial.asMathFunction(): MathFunction = + object : MathFunction { + override fun C.invoke(arg: T): T = value(this, arg) + } /** * Represent the polynomial as a regular context-less function diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt index ce6156c0b..7b26fd221 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt @@ -3,13 +3,14 @@ package scientifik.kmath.functions import scientifik.kmath.operations.Algebra import scientifik.kmath.operations.RealField +// TODO make fun interface when KT-41770 is fixed /** * A regular function that could be called only inside specific algebra context * @param T source type * @param C source algebra constraint * @param R result type */ -public fun interface MathFunction, R> { +public /*fun*/ interface MathFunction, R> { public operator fun C.invoke(arg: T): R } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt index eec61159d..e5dd8906b 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt @@ -15,15 +15,11 @@ public class SplineInterpolator>( public override val algebra: Field, public val bufferFactory: MutableBufferFactory ) : PolynomialInterpolator { - //TODO possibly optimize zeroed buffers public override fun interpolatePolynomials(points: XYPointSet): PiecewisePolynomial = algebra { - if (points.size < 3) { - error("Can't use spline interpolator with less than 3 points") - } + require(points.size >= 3) { "Can't use spline interpolator with less than 3 points" } insureSorted(points) - // Number of intervals. The number of data points is n + 1. val n = points.size - 1 // Differences between knot points @@ -34,6 +30,7 @@ public class SplineInterpolator>( for (i in 1 until n) { val g = 2.0 * (points.x[i + 1] - points.x[i - 1]) - h[i - 1] * mu[i - 1] mu[i] = h[i] / g + z[i] = (3.0 * (points.y[i + 1] * h[i - 1] - points.x[i] * (points.x[i + 1] - points.x[i - 1]) + points.y[i - 1] * h[i]) / (h[i - 1] * h[i]) - h[i - 1] * z[i - 1]) / g @@ -54,7 +51,5 @@ public class SplineInterpolator>( putLeft(points.x[j], polynomial) } } - } - } diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt index 9c7de3303..ede6db5cf 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt @@ -5,16 +5,16 @@ package scientifik.kmath.histogram * TODO replace with atomics */ -expect class LongCounter() { - fun decrement() - fun increment() - fun reset() - fun sum(): Long - fun add(l: Long) +public expect class LongCounter() { + public fun decrement() + public fun increment() + public fun reset() + public fun sum(): Long + public fun add(l: Long) } -expect class DoubleCounter() { - fun reset() - fun sum(): Double - fun add(d: Double) -} \ No newline at end of file +public expect class DoubleCounter() { + public fun reset() + public fun sum(): Double + public fun add(d: Double) +} diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt index 9ff2aacf5..0acef2fb7 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt @@ -11,49 +11,47 @@ import kotlin.contracts.contract /** * The bin in the histogram. The histogram is by definition always done in the real space */ -interface Bin : Domain { +public interface Bin : Domain { /** * The value of this bin */ - val value: Number - val center: Point + public val value: Number + public val center: Point } -interface Histogram> : Iterable { - +public interface Histogram> : Iterable { /** * Find existing bin, corresponding to given coordinates */ - operator fun get(point: Point): B? + public operator fun get(point: Point): B? /** * Dimension of the histogram */ - val dimension: Int + public val dimension: Int } -interface MutableHistogram> : Histogram { +public interface MutableHistogram> : Histogram { /** * Increment appropriate bin */ - fun putWithWeight(point: Point, weight: Double) + public fun putWithWeight(point: Point, weight: Double) - fun put(point: Point): Unit = putWithWeight(point, 1.0) + public fun put(point: Point): Unit = putWithWeight(point, 1.0) } -fun MutableHistogram.put(vararg point: T): Unit = put(ArrayBuffer(point)) +public fun MutableHistogram.put(vararg point: T): Unit = put(ArrayBuffer(point)) -fun MutableHistogram.put(vararg point: Number): Unit = +public fun MutableHistogram.put(vararg point: Number): Unit = put(RealBuffer(point.map { it.toDouble() }.toDoubleArray())) -fun MutableHistogram.put(vararg point: Double): Unit = put(RealBuffer(point)) - -fun MutableHistogram.fill(sequence: Iterable>): Unit = sequence.forEach { put(it) } +public fun MutableHistogram.put(vararg point: Double): Unit = put(RealBuffer(point)) +public fun MutableHistogram.fill(sequence: Iterable>): Unit = sequence.forEach { put(it) } /** * Pass a sequence builder into histogram */ -fun MutableHistogram.fill(block: suspend SequenceScope>.() -> Unit): Unit = +public fun MutableHistogram.fill(block: suspend SequenceScope>.() -> Unit): Unit = fill(sequence(block).asIterable()) diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt index f05ae1694..64ddc5515 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt @@ -7,9 +7,12 @@ import scientifik.kmath.real.asVector import scientifik.kmath.structures.* import kotlin.math.floor - -data class BinDef>(val space: SpaceOperations>, val center: Point, val sizes: Point) { - fun contains(vector: Point): Boolean { +public data class BinDef>( + public val space: SpaceOperations>, + public val center: Point, + public val sizes: Point +) { + public fun contains(vector: Point): Boolean { require(vector.size == center.size) { "Dimension mismatch for input vector. Expected ${center.size}, but found ${vector.size}" } val upper = space { center + sizes / 2.0 } val lower = space { center - sizes / 2.0 } @@ -18,21 +21,20 @@ data class BinDef>(val space: SpaceOperations>, val c } -class MultivariateBin>(val def: BinDef, override val value: Number) : Bin { - override operator fun contains(point: Point): Boolean = def.contains(point) - - override val dimension: Int +public class MultivariateBin>(public val def: BinDef, public override val value: Number) : Bin { + public override val dimension: Int get() = def.center.size - override val center: Point + public override val center: Point get() = def.center + public override operator fun contains(point: Point): Boolean = def.contains(point) } /** * Uniform multivariate histogram with fixed borders. Based on NDStructure implementation with complexity of m for bin search, where m is the number of dimensions. */ -class RealHistogram( +public class RealHistogram( private val lower: Buffer, private val upper: Buffer, private val binNums: IntArray = IntArray(lower.size) { 20 } @@ -40,7 +42,7 @@ class RealHistogram( private val strides = DefaultStrides(IntArray(binNums.size) { binNums[it] + 2 }) private val values: NDStructure = NDStructure.auto(strides) { LongCounter() } private val weights: NDStructure = NDStructure.auto(strides) { DoubleCounter() } - override val dimension: Int get() = lower.size + public override val dimension: Int get() = lower.size private val binSize = RealBuffer(dimension) { (upper[it] - lower[it]) / binNums[it] } init { @@ -64,7 +66,7 @@ class RealHistogram( private fun getValue(index: IntArray): Long = values[index].sum() - fun getValue(point: Buffer): Long = getValue(getIndex(point)) + public fun getValue(point: Buffer): Long = getValue(getIndex(point)) private fun getDef(index: IntArray): BinDef { val center = index.mapIndexed { axis, i -> @@ -78,9 +80,9 @@ class RealHistogram( return BinDef(RealBufferFieldOperations, center, binSize) } - fun getDef(point: Buffer): BinDef = getDef(getIndex(point)) + public fun getDef(point: Buffer): BinDef = getDef(getIndex(point)) - override operator fun get(point: Buffer): MultivariateBin? { + public override operator fun get(point: Buffer): MultivariateBin? { val index = getIndex(point) return MultivariateBin(getDef(index), getValue(index)) } @@ -90,27 +92,27 @@ class RealHistogram( // values[index].increment() // } - override fun putWithWeight(point: Buffer, weight: Double) { + public override fun putWithWeight(point: Buffer, weight: Double) { val index = getIndex(point) values[index].increment() weights[index].add(weight) } - override operator fun iterator(): Iterator> = weights.elements().map { (index, value) -> - MultivariateBin(getDef(index), value.sum()) - }.iterator() + public override operator fun iterator(): Iterator> = + weights.elements().map { (index, value) -> MultivariateBin(getDef(index), value.sum()) } + .iterator() /** * Convert this histogram into NDStructure containing bin values but not bin descriptions */ - fun values(): NDStructure = NDStructure.auto(values.shape) { values[it].sum() } + public fun values(): NDStructure = NDStructure.auto(values.shape) { values[it].sum() } /** * Sum of weights */ - fun weights(): NDStructure = NDStructure.auto(weights.shape) { weights[it].sum() } + public fun weights(): NDStructure = NDStructure.auto(weights.shape) { weights[it].sum() } - companion object { + public companion object { /** * Use it like * ``` @@ -120,9 +122,9 @@ class RealHistogram( *) *``` */ - fun fromRanges(vararg ranges: ClosedFloatingPointRange): RealHistogram = RealHistogram( - ranges.map { it.start }.asVector(), - ranges.map { it.endInclusive }.asVector() + public fun fromRanges(vararg ranges: ClosedFloatingPointRange): RealHistogram = RealHistogram( + ranges.map(ClosedFloatingPointRange::start).asVector(), + ranges.map(ClosedFloatingPointRange::endInclusive).asVector() ) /** @@ -134,10 +136,21 @@ class RealHistogram( *) *``` */ - fun fromRanges(vararg ranges: Pair, Int>): RealHistogram = RealHistogram( - ListBuffer(ranges.map { it.first.start }), - ListBuffer(ranges.map { it.first.endInclusive }), - ranges.map { it.second }.toIntArray() - ) + public fun fromRanges(vararg ranges: Pair, Int>): RealHistogram = + RealHistogram( + ListBuffer( + ranges + .map(Pair, Int>::first) + .map(ClosedFloatingPointRange::start) + ), + + ListBuffer( + ranges + .map(Pair, Int>::first) + .map(ClosedFloatingPointRange::endInclusive) + ), + + ranges.map(Pair, Int>::second).toIntArray() + ) } } diff --git a/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt b/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt index 5edecb5a5..4400da7c9 100644 --- a/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt +++ b/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt @@ -10,7 +10,7 @@ import kotlin.test.assertEquals import kotlin.test.assertFalse import kotlin.test.assertTrue -class MultivariateHistogramTest { +internal class MultivariateHistogramTest { @Test fun testSinglePutHistogram() { val histogram = RealHistogram.fromRanges( diff --git a/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt index 3765220b9..8e2e946f4 100644 --- a/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt @@ -1,33 +1,37 @@ package scientifik.kmath.histogram -actual class LongCounter { - private var sum: Long = 0 - actual fun decrement() { +public actual class LongCounter { + private var sum: Long = 0L + + public actual fun decrement() { sum-- } - actual fun increment() { + public actual fun increment() { sum++ } - actual fun reset() { + public actual fun reset() { sum = 0 } - actual fun sum(): Long = sum - actual fun add(l: Long) { + public actual fun sum(): Long = sum + + public actual fun add(l: Long) { sum += l } } -actual class DoubleCounter { +public actual class DoubleCounter { private var sum: Double = 0.0 - actual fun reset() { + + public actual fun reset() { sum = 0.0 } - actual fun sum(): Double = sum - actual fun add(d: Double) { + public actual fun sum(): Double = sum + + public actual fun add(d: Double) { sum += d } -} \ No newline at end of file +} diff --git a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt index bb3667f7d..dcf3d5491 100644 --- a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt @@ -3,5 +3,5 @@ package scientifik.kmath.histogram import java.util.concurrent.atomic.DoubleAdder import java.util.concurrent.atomic.LongAdder -actual typealias LongCounter = LongAdder -actual typealias DoubleCounter = DoubleAdder \ No newline at end of file +public actual typealias LongCounter = LongAdder +public actual typealias DoubleCounter = DoubleAdder diff --git a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt index e30a45f5a..24c30bf4c 100644 --- a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt +++ b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt @@ -8,25 +8,26 @@ import kotlin.math.floor //TODO move to common -class UnivariateBin(val position: Double, val size: Double, val counter: LongCounter = LongCounter()) : Bin { +public class UnivariateBin( + public val position: Double, + public val size: Double, + public val counter: LongCounter = LongCounter() +) : Bin { //TODO add weighting - override val value: Number get() = counter.sum() + public override val value: Number get() = counter.sum() - override val center: RealVector get() = doubleArrayOf(position).asVector() + public override val center: RealVector get() = doubleArrayOf(position).asVector() + public override val dimension: Int get() = 1 - operator fun contains(value: Double): Boolean = value in (position - size / 2)..(position + size / 2) - - override fun contains(point: Buffer): Boolean = contains(point[0]) - - internal operator fun inc() = this.also { counter.increment() } - - override val dimension: Int get() = 1 + public operator fun contains(value: Double): Boolean = value in (position - size / 2)..(position + size / 2) + public override fun contains(point: Buffer): Boolean = contains(point[0]) + internal operator fun inc(): UnivariateBin = this.also { counter.increment() } } /** * Univariate histogram with log(n) bin search speed */ -class UnivariateHistogram private constructor(private val factory: (Double) -> UnivariateBin) : +public class UnivariateHistogram private constructor(private val factory: (Double) -> UnivariateBin) : MutableHistogram { private val bins: TreeMap = TreeMap() @@ -46,16 +47,16 @@ class UnivariateHistogram private constructor(private val factory: (Double) -> U synchronized(this) { bins.put(it.position, it) } } - override operator fun get(point: Buffer): UnivariateBin? = get(point[0]) + public override operator fun get(point: Buffer): UnivariateBin? = get(point[0]) - override val dimension: Int get() = 1 + public override val dimension: Int get() = 1 - override operator fun iterator(): Iterator = bins.values.iterator() + public override operator fun iterator(): Iterator = bins.values.iterator() /** * Thread safe put operation */ - fun put(value: Double) { + public fun put(value: Double) { (get(value) ?: createBin(value)).inc() } @@ -64,13 +65,13 @@ class UnivariateHistogram private constructor(private val factory: (Double) -> U put(point[0]) } - companion object { - fun uniform(binSize: Double, start: Double = 0.0): UnivariateHistogram = UnivariateHistogram { value -> + public companion object { + public fun uniform(binSize: Double, start: Double = 0.0): UnivariateHistogram = UnivariateHistogram { value -> val center = start + binSize * floor((value - start) / binSize + 0.5) UnivariateBin(center, binSize) } - fun custom(borders: DoubleArray): UnivariateHistogram { + public fun custom(borders: DoubleArray): UnivariateHistogram { val sorted = borders.sortedArray() return UnivariateHistogram { value -> @@ -79,10 +80,12 @@ class UnivariateHistogram private constructor(private val factory: (Double) -> U Double.NEGATIVE_INFINITY, Double.MAX_VALUE ) + value > sorted.last() -> UnivariateBin( Double.POSITIVE_INFINITY, Double.MAX_VALUE ) + else -> { val index = (0 until sorted.size).first { value > sorted[it] } val left = sorted[index] @@ -95,4 +98,4 @@ class UnivariateHistogram private constructor(private val factory: (Double) -> U } } -fun UnivariateHistogram.fill(sequence: Iterable) = sequence.forEach { put(it) } +public fun UnivariateHistogram.fill(sequence: Iterable): Unit = sequence.forEach(::put) diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt index 3b874adaa..e1f0e8d6e 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt @@ -5,19 +5,19 @@ import scientifik.kmath.chains.collect import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.BufferFactory -interface Sampler { - fun sample(generator: RandomGenerator): Chain +public interface Sampler { + public fun sample(generator: RandomGenerator): Chain } /** * A distribution of typed objects */ -interface Distribution : Sampler { +public interface Distribution : Sampler { /** * A probability value for given argument [arg]. * For continuous distributions returns PDF */ - fun probability(arg: T): Double + public fun probability(arg: T): Double /** * Create a chain of samples from this distribution. @@ -28,20 +28,20 @@ interface Distribution : Sampler { /** * An empty companion. Distribution factories should be written as its extensions */ - companion object + public companion object } -interface UnivariateDistribution> : Distribution { +public interface UnivariateDistribution> : Distribution { /** * Cumulative distribution for ordered parameter (CDF) */ - fun cumulative(arg: T): Double + public fun cumulative(arg: T): Double } /** * Compute probability integral in an interval */ -fun > UnivariateDistribution.integral(from: T, to: T): Double { +public fun > UnivariateDistribution.integral(from: T, to: T): Double { require(to > from) return cumulative(to) - cumulative(from) } @@ -49,7 +49,7 @@ fun > UnivariateDistribution.integral(from: T, to: T): Doub /** * Sample a bunch of values */ -fun Sampler.sampleBuffer( +public fun Sampler.sampleBuffer( generator: RandomGenerator, size: Int, bufferFactory: BufferFactory = Buffer.Companion::boxing @@ -57,6 +57,7 @@ fun Sampler.sampleBuffer( require(size > 1) //creating temporary storage once val tmp = ArrayList(size) + return sample(generator).collect { chain -> //clear list from previous run tmp.clear() @@ -72,5 +73,5 @@ fun Sampler.sampleBuffer( /** * Generate a bunch of samples from real distributions */ -fun Sampler.sampleBuffer(generator: RandomGenerator, size: Int) = - sampleBuffer(generator, size, Buffer.Companion::real) \ No newline at end of file +public fun Sampler.sampleBuffer(generator: RandomGenerator, size: Int) = + sampleBuffer(generator, size, Buffer.Companion::real) diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt index ddb50ef42..b3a37ada1 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt +++ b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt @@ -12,33 +12,29 @@ import kotlin.math.pow import kotlin.math.sqrt public abstract class ContinuousSamplerDistribution : Distribution { - private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingRealChain() { private val sampler = buildCMSampler(generator) - override fun nextDouble(): Double = sampler.sample() - - override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) + public override fun nextDouble(): Double = sampler.sample() + public override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) } protected abstract fun buildCMSampler(generator: RandomGenerator): ContinuousSampler - override fun sample(generator: RandomGenerator): BlockingRealChain = ContinuousSamplerChain(generator) + public override fun sample(generator: RandomGenerator): BlockingRealChain = ContinuousSamplerChain(generator) } public abstract class DiscreteSamplerDistribution : Distribution { - private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingIntChain() { private val sampler = buildSampler(generator) - override fun nextInt(): Int = sampler.sample() - - override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) + public override fun nextInt(): Int = sampler.sample() + public override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) } protected abstract fun buildSampler(generator: RandomGenerator): DiscreteSampler - override fun sample(generator: RandomGenerator): BlockingIntChain = ContinuousSamplerChain(generator) + public override fun sample(generator: RandomGenerator): BlockingIntChain = ContinuousSamplerChain(generator) } public enum class NormalSamplerMethod { @@ -58,7 +54,7 @@ public fun Distribution.Companion.normal( method: NormalSamplerMethod = NormalSamplerMethod.Ziggurat ): Distribution = object : ContinuousSamplerDistribution() { override fun buildCMSampler(generator: RandomGenerator): ContinuousSampler { - val provider: UniformRandomProvider = generator.asUniformRandomProvider() + val provider = generator.asUniformRandomProvider() return normalSampler(method, provider) } @@ -76,34 +72,27 @@ public fun Distribution.Companion.normal( private val norm = sigma * sqrt(PI * 2) override fun buildCMSampler(generator: RandomGenerator): ContinuousSampler { - val provider: UniformRandomProvider = generator.asUniformRandomProvider() + val provider = generator.asUniformRandomProvider() val normalizedSampler = normalSampler(method, provider) return GaussianSampler(normalizedSampler, mean, sigma) } - override fun probability(arg: Double): Double { - return exp(-(arg - mean).pow(2) / 2 / sigma2) / norm - } + override fun probability(arg: Double): Double = exp(-(arg - mean).pow(2) / 2 / sigma2) / norm } -public fun Distribution.Companion.poisson( - lambda: Double -): DiscreteSamplerDistribution = object : DiscreteSamplerDistribution() { +public fun Distribution.Companion.poisson(lambda: Double): DiscreteSamplerDistribution = + object : DiscreteSamplerDistribution() { + private val computedProb: MutableMap = hashMapOf(0 to exp(-lambda)) - override fun buildSampler(generator: RandomGenerator): DiscreteSampler { - return PoissonSampler.of(generator.asUniformRandomProvider(), lambda) - } + override fun buildSampler(generator: RandomGenerator): DiscreteSampler = + PoissonSampler.of(generator.asUniformRandomProvider(), lambda) - private val computedProb: HashMap = hashMapOf(0 to exp(-lambda)) + override fun probability(arg: Int): Double { + require(arg >= 0) { "The argument must be >= 0" } - override fun probability(arg: Int): Double { - require(arg >= 0) { "The argument must be >= 0" } - return if (arg > 40) { - exp(-(arg - lambda).pow(2) / 2 / lambda) / sqrt(2 * PI * lambda) - } else { - computedProb.getOrPut(arg) { - probability(arg - 1) * lambda / arg - } + return if (arg > 40) + exp(-(arg - lambda).pow(2) / 2 / lambda) / sqrt(2 * PI * lambda) + else + computedProb.getOrPut(arg) { probability(arg - 1) * lambda / arg } } } -} diff --git a/settings.gradle.kts b/settings.gradle.kts index a09e4e144..53e3ece3c 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -27,7 +27,6 @@ include( ":kmath-memory", ":kmath-core", ":kmath-functions", -// ":kmath-io", ":kmath-coroutines", ":kmath-histograms", ":kmath-commons", @@ -38,6 +37,6 @@ include( ":kmath-dimensions", ":kmath-for-real", ":kmath-geometry", - ":kmath-ast", +// ":kmath-ast", ":examples" ) From 8ae9a071ef362f630ead28b30fce80680238955b Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Wed, 9 Sep 2020 21:12:18 +0700 Subject: [PATCH 05/26] Add more explicit public modifiers --- .../commons/expressions/DiffExpression.kt | 78 +++++++++---------- .../kmath/commons/linear/CMMatrix.kt | 68 ++++++++-------- .../kmath/commons/linear/CMSolver.kt | 33 ++++---- .../random/CMRandomGeneratorWrapper.kt | 24 +++--- .../commons/transform/Transformations.kt | 27 +++---- .../kmath/commons/expressions/AutoDiffTest.kt | 10 ++- .../scientifik/kmath/operations/BigInt.kt | 30 +++---- .../kotlin/scientifik/kmath/chains/Chain.kt | 15 ++-- .../scientifik/kmath/streaming/BufferFlow.kt | 7 +- .../scientifik/kmath/chains/ChainExt.kt | 5 +- .../kmath/structures/LazyNDStructure.kt | 4 +- .../kmath/streaming/BufferFlowTest.kt | 2 +- .../kmath/streaming/RingBufferTest.kt | 2 +- .../dimensions/DMatrixContextTest.kt | 4 +- .../kotlin/scientifik/kmath/dimensions/dim.kt | 24 +++--- .../kotlin/scientifik/kmath/dimensions/dim.kt | 20 +++-- .../scientifik/kmath/real/RealVector.kt | 14 ++-- .../scientific.kmath.real/RealMatrixTest.kt | 2 +- .../scientifik/kmath/linear/VectorTest.kt | 2 +- .../kmath/geometry/Euclidean2DSpace.kt | 47 +++++------ .../kmath/geometry/Euclidean3DSpace.kt | 41 +++++----- .../kmath/geometry/GeometrySpace.kt | 8 +- .../kotlin/scientifik/kmath/geometry/Line.kt | 6 +- .../kmath/geometry/ReferenceFrame.kt | 3 +- .../scientifik.kmath.linear/KomaMatrix.kt | 53 ++++++------- kmath-prob/build.gradle.kts | 4 + .../kmath/prob/CommonsDistributionsTest.kt | 5 +- .../scientifik/kmath/prob/StatisticTest.kt | 9 ++- .../kmath/viktor/ViktorNDStructure.kt | 70 +++++++++-------- 29 files changed, 298 insertions(+), 319 deletions(-) diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt index a6f905471..d556eb762 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt @@ -15,8 +15,8 @@ public class DerivativeStructureField( public val order: Int, public val parameters: Map ) : ExtendedField { - override val zero: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size) } - override val one: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size, 1.0) } + public override val zero: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size) } + public override val one: DerivativeStructure by lazy { DerivativeStructure(order, parameters.size, 1.0) } private val variables: Map = parameters.mapValues { (key, value) -> DerivativeStructure(parameters.size, order, parameters.keys.indexOf(key), value) @@ -40,46 +40,43 @@ public class DerivativeStructureField( } public fun DerivativeStructure.deriv(vararg orders: Pair): Double = deriv(mapOf(*orders)) + public override fun add(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.add(b) - override fun add(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.add(b) - - override fun multiply(a: DerivativeStructure, k: Number): DerivativeStructure = when (k) { + public override fun multiply(a: DerivativeStructure, k: Number): DerivativeStructure = when (k) { is Double -> a.multiply(k) is Int -> a.multiply(k) else -> a.multiply(k.toDouble()) } - override fun multiply(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.multiply(b) + public override fun multiply(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.multiply(b) + public override fun divide(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.divide(b) + public override fun sin(arg: DerivativeStructure): DerivativeStructure = arg.sin() + public override fun cos(arg: DerivativeStructure): DerivativeStructure = arg.cos() + public override fun tan(arg: DerivativeStructure): DerivativeStructure = arg.tan() + public override fun asin(arg: DerivativeStructure): DerivativeStructure = arg.asin() + public override fun acos(arg: DerivativeStructure): DerivativeStructure = arg.acos() + public override fun atan(arg: DerivativeStructure): DerivativeStructure = arg.atan() + public override fun sinh(arg: DerivativeStructure): DerivativeStructure = arg.sinh() + public override fun cosh(arg: DerivativeStructure): DerivativeStructure = arg.cosh() + public override fun tanh(arg: DerivativeStructure): DerivativeStructure = arg.tanh() + public override fun asinh(arg: DerivativeStructure): DerivativeStructure = arg.asinh() + public override fun acosh(arg: DerivativeStructure): DerivativeStructure = arg.acosh() + public override fun atanh(arg: DerivativeStructure): DerivativeStructure = arg.atanh() - override fun divide(a: DerivativeStructure, b: DerivativeStructure): DerivativeStructure = a.divide(b) - - override fun sin(arg: DerivativeStructure): DerivativeStructure = arg.sin() - override fun cos(arg: DerivativeStructure): DerivativeStructure = arg.cos() - override fun tan(arg: DerivativeStructure): DerivativeStructure = arg.tan() - override fun asin(arg: DerivativeStructure): DerivativeStructure = arg.asin() - override fun acos(arg: DerivativeStructure): DerivativeStructure = arg.acos() - override fun atan(arg: DerivativeStructure): DerivativeStructure = arg.atan() - override fun sinh(arg: DerivativeStructure): DerivativeStructure = arg.sinh() - override fun cosh(arg: DerivativeStructure): DerivativeStructure = arg.cosh() - override fun tanh(arg: DerivativeStructure): DerivativeStructure = arg.tanh() - override fun asinh(arg: DerivativeStructure): DerivativeStructure = arg.asinh() - override fun acosh(arg: DerivativeStructure): DerivativeStructure = arg.acosh() - override fun atanh(arg: DerivativeStructure): DerivativeStructure = arg.atanh() - - override fun power(arg: DerivativeStructure, pow: Number): DerivativeStructure = when (pow) { + public override fun power(arg: DerivativeStructure, pow: Number): DerivativeStructure = when (pow) { is Double -> arg.pow(pow) is Int -> arg.pow(pow) else -> arg.pow(pow.toDouble()) } public fun power(arg: DerivativeStructure, pow: DerivativeStructure): DerivativeStructure = arg.pow(pow) - override fun exp(arg: DerivativeStructure): DerivativeStructure = arg.exp() - override fun ln(arg: DerivativeStructure): DerivativeStructure = arg.log() + public override fun exp(arg: DerivativeStructure): DerivativeStructure = arg.exp() + public override fun ln(arg: DerivativeStructure): DerivativeStructure = arg.log() - override operator fun DerivativeStructure.plus(b: Number): DerivativeStructure = add(b.toDouble()) - override operator fun DerivativeStructure.minus(b: Number): DerivativeStructure = subtract(b.toDouble()) - override operator fun Number.plus(b: DerivativeStructure): DerivativeStructure = b + this - override operator fun Number.minus(b: DerivativeStructure): DerivativeStructure = b - this + public override operator fun DerivativeStructure.plus(b: Number): DerivativeStructure = add(b.toDouble()) + public override operator fun DerivativeStructure.minus(b: Number): DerivativeStructure = subtract(b.toDouble()) + public override operator fun Number.plus(b: DerivativeStructure): DerivativeStructure = b + this + public override operator fun Number.minus(b: DerivativeStructure): DerivativeStructure = b - this } /** @@ -87,10 +84,10 @@ public class DerivativeStructureField( */ public class DiffExpression(public val function: DerivativeStructureField.() -> DerivativeStructure) : Expression { - override operator fun invoke(arguments: Map): Double = DerivativeStructureField( + public override operator fun invoke(arguments: Map): Double = DerivativeStructureField( 0, arguments - ).run(function).value + ).function().value /** * Get the derivative expression with given orders @@ -110,25 +107,22 @@ public fun DiffExpression.derivative(name: String): Expression = derivat * A context for [DiffExpression] (not to be confused with [DerivativeStructure]) */ public object DiffExpressionAlgebra : ExpressionAlgebra, Field { - override fun variable(name: String, default: Double?): DiffExpression = + public override val zero: DiffExpression = DiffExpression { 0.0.const() } + public override val one: DiffExpression = DiffExpression { 1.0.const() } + + public override fun variable(name: String, default: Double?): DiffExpression = DiffExpression { variable(name, default?.const()) } - override fun const(value: Double): DiffExpression = - DiffExpression { value.const() } + public override fun const(value: Double): DiffExpression = DiffExpression { value.const() } - override fun add(a: DiffExpression, b: DiffExpression): DiffExpression = + public override fun add(a: DiffExpression, b: DiffExpression): DiffExpression = DiffExpression { a.function(this) + b.function(this) } - override val zero: DiffExpression = DiffExpression { 0.0.const() } + public override fun multiply(a: DiffExpression, k: Number): DiffExpression = DiffExpression { a.function(this) * k } - override fun multiply(a: DiffExpression, k: Number): DiffExpression = - DiffExpression { a.function(this) * k } - - override val one: DiffExpression = DiffExpression { 1.0.const() } - - override fun multiply(a: DiffExpression, b: DiffExpression): DiffExpression = + public override fun multiply(a: DiffExpression, b: DiffExpression): DiffExpression = DiffExpression { a.function(this) * b.function(this) } - override fun divide(a: DiffExpression, b: DiffExpression): DiffExpression = + public override fun divide(a: DiffExpression, b: DiffExpression): DiffExpression = DiffExpression { a.function(this) / b.function(this) } } diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt index f0bbdbe65..72288a85e 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt @@ -5,32 +5,32 @@ import scientifik.kmath.linear.* import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.NDStructure -class CMMatrix(val origin: RealMatrix, features: Set? = null) : +public class CMMatrix(public val origin: RealMatrix, features: Set? = null) : FeaturedMatrix { - override val rowNum: Int get() = origin.rowDimension - override val colNum: Int get() = origin.columnDimension + public override val rowNum: Int get() = origin.rowDimension + public override val colNum: Int get() = origin.columnDimension - override val features: Set = features ?: sequence { + public override val features: Set = features ?: sequence { if (origin is DiagonalMatrix) yield(DiagonalFeature) }.toHashSet() - override fun suggestFeature(vararg features: MatrixFeature): CMMatrix = + public override fun suggestFeature(vararg features: MatrixFeature): CMMatrix = CMMatrix(origin, this.features + features) - override operator fun get(i: Int, j: Int): Double = origin.getEntry(i, j) + public override operator fun get(i: Int, j: Int): Double = origin.getEntry(i, j) - override fun equals(other: Any?): Boolean { + public override fun equals(other: Any?): Boolean { return NDStructure.equals(this, other as? NDStructure<*> ?: return false) } - override fun hashCode(): Int { + public override fun hashCode(): Int { var result = origin.hashCode() result = 31 * result + features.hashCode() return result } } -fun Matrix.toCM(): CMMatrix = if (this is CMMatrix) { +public fun Matrix.toCM(): CMMatrix = if (this is CMMatrix) { this } else { //TODO add feature analysis @@ -38,56 +38,56 @@ fun Matrix.toCM(): CMMatrix = if (this is CMMatrix) { CMMatrix(Array2DRowRealMatrix(array)) } -fun RealMatrix.asMatrix(): CMMatrix = CMMatrix(this) +public fun RealMatrix.asMatrix(): CMMatrix = CMMatrix(this) -class CMVector(val origin: RealVector) : Point { - override val size: Int get() = origin.dimension +public class CMVector(public val origin: RealVector) : Point { + public override val size: Int get() = origin.dimension - override operator fun get(index: Int): Double = origin.getEntry(index) + public override operator fun get(index: Int): Double = origin.getEntry(index) - override operator fun iterator(): Iterator = origin.toArray().iterator() + public override operator fun iterator(): Iterator = origin.toArray().iterator() } -fun Point.toCM(): CMVector = if (this is CMVector) this else { +public fun Point.toCM(): CMVector = if (this is CMVector) this else { val array = DoubleArray(size) { this[it] } CMVector(ArrayRealVector(array)) } -fun RealVector.toPoint(): CMVector = CMVector(this) +public fun RealVector.toPoint(): CMVector = CMVector(this) -object CMMatrixContext : MatrixContext { - override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> Double): CMMatrix { +public object CMMatrixContext : MatrixContext { + public override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> Double): CMMatrix { val array = Array(rows) { i -> DoubleArray(columns) { j -> initializer(i, j) } } return CMMatrix(Array2DRowRealMatrix(array)) } - override fun Matrix.dot(other: Matrix): CMMatrix = - CMMatrix(this.toCM().origin.multiply(other.toCM().origin)) + public override fun Matrix.dot(other: Matrix): CMMatrix = + CMMatrix(toCM().origin.multiply(other.toCM().origin)) - override fun Matrix.dot(vector: Point): CMVector = - CMVector(this.toCM().origin.preMultiply(vector.toCM().origin)) + public override fun Matrix.dot(vector: Point): CMVector = + CMVector(toCM().origin.preMultiply(vector.toCM().origin)) - override operator fun Matrix.unaryMinus(): CMMatrix = + public override operator fun Matrix.unaryMinus(): CMMatrix = produce(rowNum, colNum) { i, j -> -get(i, j) } - override fun add(a: Matrix, b: Matrix): CMMatrix = + public override fun add(a: Matrix, b: Matrix): CMMatrix = CMMatrix(a.toCM().origin.multiply(b.toCM().origin)) - override operator fun Matrix.minus(b: Matrix): CMMatrix = - CMMatrix(this.toCM().origin.subtract(b.toCM().origin)) + public override operator fun Matrix.minus(b: Matrix): CMMatrix = + CMMatrix(toCM().origin.subtract(b.toCM().origin)) - override fun multiply(a: Matrix, k: Number): CMMatrix = + public override fun multiply(a: Matrix, k: Number): CMMatrix = CMMatrix(a.toCM().origin.scalarMultiply(k.toDouble())) - override operator fun Matrix.times(value: Double): Matrix = + public override operator fun Matrix.times(value: Double): Matrix = produce(rowNum, colNum) { i, j -> get(i, j) * value } } -operator fun CMMatrix.plus(other: CMMatrix): CMMatrix = - CMMatrix(this.origin.add(other.origin)) +public operator fun CMMatrix.plus(other: CMMatrix): CMMatrix = + CMMatrix(origin.add(other.origin)) -operator fun CMMatrix.minus(other: CMMatrix): CMMatrix = - CMMatrix(this.origin.subtract(other.origin)) +public operator fun CMMatrix.minus(other: CMMatrix): CMMatrix = + CMMatrix(origin.subtract(other.origin)) -infix fun CMMatrix.dot(other: CMMatrix): CMMatrix = - CMMatrix(this.origin.multiply(other.origin)) +public infix fun CMMatrix.dot(other: CMMatrix): CMMatrix = + CMMatrix(origin.multiply(other.origin)) diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt index 77b688e31..1e79aff21 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt @@ -4,7 +4,7 @@ import org.apache.commons.math3.linear.* import scientifik.kmath.linear.Point import scientifik.kmath.structures.Matrix -enum class CMDecomposition { +public enum class CMDecomposition { LUP, QR, RRQR, @@ -12,29 +12,30 @@ enum class CMDecomposition { CHOLESKY } +public fun CMMatrixContext.solver( + a: Matrix, + decomposition: CMDecomposition = CMDecomposition.LUP +): DecompositionSolver = when (decomposition) { + CMDecomposition.LUP -> LUDecomposition(a.toCM().origin).solver + CMDecomposition.RRQR -> RRQRDecomposition(a.toCM().origin).solver + CMDecomposition.QR -> QRDecomposition(a.toCM().origin).solver + CMDecomposition.EIGEN -> EigenDecomposition(a.toCM().origin).solver + CMDecomposition.CHOLESKY -> CholeskyDecomposition(a.toCM().origin).solver +} -fun CMMatrixContext.solver(a: Matrix, decomposition: CMDecomposition = CMDecomposition.LUP) = - when (decomposition) { - CMDecomposition.LUP -> LUDecomposition(a.toCM().origin).solver - CMDecomposition.RRQR -> RRQRDecomposition(a.toCM().origin).solver - CMDecomposition.QR -> QRDecomposition(a.toCM().origin).solver - CMDecomposition.EIGEN -> EigenDecomposition(a.toCM().origin).solver - CMDecomposition.CHOLESKY -> CholeskyDecomposition(a.toCM().origin).solver - } - -fun CMMatrixContext.solve( +public fun CMMatrixContext.solve( a: Matrix, b: Matrix, decomposition: CMDecomposition = CMDecomposition.LUP -) = solver(a, decomposition).solve(b.toCM().origin).asMatrix() +): CMMatrix = solver(a, decomposition).solve(b.toCM().origin).asMatrix() -fun CMMatrixContext.solve( +public fun CMMatrixContext.solve( a: Matrix, b: Point, decomposition: CMDecomposition = CMDecomposition.LUP -) = solver(a, decomposition).solve(b.toCM().origin).toPoint() +): CMVector = solver(a, decomposition).solve(b.toCM().origin).toPoint() -fun CMMatrixContext.inverse( +public fun CMMatrixContext.inverse( a: Matrix, decomposition: CMDecomposition = CMDecomposition.LUP -) = solver(a, decomposition).inverse.asMatrix() +): CMMatrix = solver(a, decomposition).inverse.asMatrix() diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt index cb2b5dd9c..3e60d7cdd 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt @@ -2,32 +2,32 @@ package scientifik.kmath.commons.random import scientifik.kmath.prob.RandomGenerator -class CMRandomGeneratorWrapper(val factory: (IntArray) -> RandomGenerator) : +public class CMRandomGeneratorWrapper(public val factory: (IntArray) -> RandomGenerator) : org.apache.commons.math3.random.RandomGenerator { private var generator: RandomGenerator = factory(intArrayOf()) - override fun nextBoolean(): Boolean = generator.nextBoolean() - override fun nextFloat(): Float = generator.nextDouble().toFloat() + public override fun nextBoolean(): Boolean = generator.nextBoolean() + public override fun nextFloat(): Float = generator.nextDouble().toFloat() - override fun setSeed(seed: Int) { + public override fun setSeed(seed: Int) { generator = factory(intArrayOf(seed)) } - override fun setSeed(seed: IntArray) { + public override fun setSeed(seed: IntArray) { generator = factory(seed) } - override fun setSeed(seed: Long) { + public override fun setSeed(seed: Long) { setSeed(seed.toInt()) } - override fun nextBytes(bytes: ByteArray) { + public override fun nextBytes(bytes: ByteArray) { generator.fillBytes(bytes) } - override fun nextInt(): Int = generator.nextInt() - override fun nextInt(n: Int): Int = generator.nextInt(n) - override fun nextGaussian(): Double = TODO() - override fun nextDouble(): Double = generator.nextDouble() - override fun nextLong(): Long = generator.nextLong() + public override fun nextInt(): Int = generator.nextInt() + public override fun nextInt(n: Int): Int = generator.nextInt(n) + public override fun nextGaussian(): Double = TODO() + public override fun nextDouble(): Double = generator.nextDouble() + public override fun nextLong(): Long = generator.nextLong() } diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt index eb1b5b69a..4af0d2b72 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt +++ b/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt @@ -13,8 +13,7 @@ import scientifik.kmath.structures.* /** * Streaming and buffer transformations */ -object Transformations { - +public object Transformations { private fun Buffer.toArray(): Array = Array(size) { org.apache.commons.math3.complex.Complex(get(it).re, get(it).im) } @@ -32,35 +31,35 @@ object Transformations { Complex(value.real, value.imaginary) } - fun fourier( + public fun fourier( normalization: DftNormalization = DftNormalization.STANDARD, direction: TransformType = TransformType.FORWARD ): SuspendBufferTransform = { FastFourierTransformer(normalization).transform(it.toArray(), direction).asBuffer() } - fun realFourier( + public fun realFourier( normalization: DftNormalization = DftNormalization.STANDARD, direction: TransformType = TransformType.FORWARD ): SuspendBufferTransform = { FastFourierTransformer(normalization).transform(it.asArray(), direction).asBuffer() } - fun sine( + public fun sine( normalization: DstNormalization = DstNormalization.STANDARD_DST_I, direction: TransformType = TransformType.FORWARD ): SuspendBufferTransform = { FastSineTransformer(normalization).transform(it.asArray(), direction).asBuffer() } - fun cosine( + public fun cosine( normalization: DctNormalization = DctNormalization.STANDARD_DCT_I, direction: TransformType = TransformType.FORWARD ): SuspendBufferTransform = { FastCosineTransformer(normalization).transform(it.asArray(), direction).asBuffer() } - fun hadamard( + public fun hadamard( direction: TransformType = TransformType.FORWARD ): SuspendBufferTransform = { FastHadamardTransformer().transform(it.asArray(), direction).asBuffer() @@ -71,7 +70,7 @@ object Transformations { * Process given [Flow] with commons-math fft transformation */ @FlowPreview -fun Flow>.FFT( +public fun Flow>.FFT( normalization: DftNormalization = DftNormalization.STANDARD, direction: TransformType = TransformType.FORWARD ): Flow> { @@ -81,7 +80,7 @@ fun Flow>.FFT( @FlowPreview @JvmName("realFFT") -fun Flow>.FFT( +public fun Flow>.FFT( normalization: DftNormalization = DftNormalization.STANDARD, direction: TransformType = TransformType.FORWARD ): Flow> { @@ -90,20 +89,18 @@ fun Flow>.FFT( } /** - * Process a continous flow of real numbers in FFT splitting it in chunks of [bufferSize]. + * Process a continuous flow of real numbers in FFT splitting it in chunks of [bufferSize]. */ @FlowPreview @JvmName("realFFT") -fun Flow.FFT( +public fun Flow.FFT( bufferSize: Int = Int.MAX_VALUE, normalization: DftNormalization = DftNormalization.STANDARD, direction: TransformType = TransformType.FORWARD -): Flow { - return chunked(bufferSize).FFT(normalization,direction).spread() -} +): Flow = chunked(bufferSize).FFT(normalization, direction).spread() /** * Map a complex flow into real flow by taking real part of each number */ @FlowPreview -fun Flow.real(): Flow = map{it.re} \ No newline at end of file +public fun Flow.real(): Flow = map { it.re } diff --git a/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt b/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt index bbdcff2fc..3d8a1d5f0 100644 --- a/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt +++ b/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt @@ -6,12 +6,16 @@ import kotlin.contracts.contract import kotlin.test.Test import kotlin.test.assertEquals -inline fun diff(order: Int, vararg parameters: Pair, block: DerivativeStructureField.() -> R): R { +internal inline fun diff( + order: Int, + vararg parameters: Pair, + block: DerivativeStructureField.() -> R +): R { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } return DerivativeStructureField(order, mapOf(*parameters)).run(block) } -class AutoDiffTest { +internal class AutoDiffTest { @Test fun derivativeStructureFieldTest() { val res = diff(3, "x" to 1.0, "y" to 1.0) { @@ -33,4 +37,4 @@ class AutoDiffTest { assertEquals(10.0, f("x" to 1.0, "y" to 2.0)) assertEquals(6.0, f.derivative("x")("x" to 1.0, "y" to 2.0)) } -} \ No newline at end of file +} diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt index cbee88e38..fbb60026e 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt @@ -41,10 +41,10 @@ public class BigInt internal constructor( private val magnitude: Magnitude ) : Comparable { public override fun compareTo(other: BigInt): Int = when { - (this.sign == 0.toByte()) and (other.sign == 0.toByte()) -> 0 - this.sign < other.sign -> -1 - this.sign > other.sign -> 1 - else -> this.sign * compareMagnitudes(this.magnitude, other.magnitude) + (sign == 0.toByte()) and (other.sign == 0.toByte()) -> 0 + sign < other.sign -> -1 + sign > other.sign -> 1 + else -> sign * compareMagnitudes(magnitude, other.magnitude) } public override fun equals(other: Any?): Boolean = @@ -123,7 +123,7 @@ public class BigInt internal constructor( return Pair(BigInt((this.sign * other.sign).toByte(), q.magnitude), r) } - public operator fun div(other: BigInt): BigInt = this.division(other).first + public operator fun div(other: BigInt): BigInt = division(other).first public infix fun shl(i: Int): BigInt { if (this == ZERO) return ZERO @@ -132,16 +132,16 @@ public class BigInt internal constructor( val relShift = i % BASE_SIZE val shiftLeft = { x: UInt -> if (relShift >= 32) 0U else x shl relShift } val shiftRight = { x: UInt -> if (BASE_SIZE - relShift >= 32) 0U else x shr (BASE_SIZE - relShift) } - val newMagnitude = Magnitude(this.magnitude.size + fullShifts) + val newMagnitude = Magnitude(magnitude.size + fullShifts) - for (j in this.magnitude.indices) { + for (j in magnitude.indices) { newMagnitude[j + fullShifts - 1] = shiftLeft(this.magnitude[j]) if (j != 0) newMagnitude[j + fullShifts - 1] = newMagnitude[j + fullShifts - 1] or shiftRight(this.magnitude[j - 1]) } - newMagnitude[this.magnitude.size + fullShifts - 1] = shiftRight(this.magnitude.last()) + newMagnitude[magnitude.size + fullShifts - 1] = shiftRight(magnitude.last()) return BigInt(this.sign, stripLeadingZeros(newMagnitude)) } @@ -153,13 +153,13 @@ public class BigInt internal constructor( val shiftRight = { x: UInt -> if (relShift >= 32) 0U else x shr relShift } val shiftLeft = { x: UInt -> if (BASE_SIZE - relShift >= 32) 0U else x shl (BASE_SIZE - relShift) } if (this.magnitude.size - fullShifts <= 0) return ZERO - val newMagnitude: Magnitude = Magnitude(this.magnitude.size - fullShifts) + val newMagnitude: Magnitude = Magnitude(magnitude.size - fullShifts) - for (j in fullShifts until this.magnitude.size) { - newMagnitude[j - fullShifts] = shiftRight(this.magnitude[j]) + for (j in fullShifts until magnitude.size) { + newMagnitude[j - fullShifts] = shiftRight(magnitude[j]) - if (j != this.magnitude.size - 1) - newMagnitude[j - fullShifts] = newMagnitude[j - fullShifts] or shiftLeft(this.magnitude[j + 1]) + if (j != magnitude.size - 1) + newMagnitude[j - fullShifts] = newMagnitude[j - fullShifts] or shiftLeft(magnitude[j + 1]) } return BigInt(this.sign, stripLeadingZeros(newMagnitude)) @@ -168,11 +168,11 @@ public class BigInt internal constructor( public infix fun or(other: BigInt): BigInt { if (this == ZERO) return other if (other == ZERO) return this - val resSize = max(this.magnitude.size, other.magnitude.size) + val resSize = max(magnitude.size, other.magnitude.size) val newMagnitude: Magnitude = Magnitude(resSize) for (i in 0 until resSize) { - if (i < this.magnitude.size) newMagnitude[i] = newMagnitude[i] or this.magnitude[i] + if (i < magnitude.size) newMagnitude[i] = newMagnitude[i] or magnitude[i] if (i < other.magnitude.size) newMagnitude[i] = newMagnitude[i] or other.magnitude[i] } diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt index e899f8ece..bf79c1601 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt @@ -149,13 +149,16 @@ public fun Chain.collect(mapper: suspend (Chain) -> R): Chain = override fun fork(): Chain = this@collect.fork().collect(mapper) } -public fun Chain.collectWithState(state: S, stateFork: (S) -> S, mapper: suspend S.(Chain) -> R): Chain = - object : Chain { - override suspend fun next(): R = state.mapper(this@collectWithState) +public fun Chain.collectWithState( + state: S, + stateFork: (S) -> S, + mapper: suspend S.(Chain) -> R +): Chain = object : Chain { + override suspend fun next(): R = state.mapper(this@collectWithState) - override fun fork(): Chain = - this@collectWithState.fork().collectWithState(stateFork(state), stateFork, mapper) - } + override fun fork(): Chain = + this@collectWithState.fork().collectWithState(stateFork(state), stateFork, mapper) +} /** * Zip two chains together using given transformation diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt index ae1860974..991642787 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt @@ -49,10 +49,8 @@ public fun Flow.chunked(bufferSize: Int): Flow = flow { require(bufferSize > 0) { "Resulting chunk size must be more than zero" } if (this@chunked is BlockingRealChain) { - //performance optimization for blocking primitive chain - while (true) { - emit(nextBlock(bufferSize).asBuffer()) - } + // performance optimization for blocking primitive chain + while (true) emit(nextBlock(bufferSize).asBuffer()) } else { val array = DoubleArray(bufferSize) var counter = 0 @@ -60,6 +58,7 @@ public fun Flow.chunked(bufferSize: Int): Flow = flow { this@chunked.collect { element -> array[counter] = element counter++ + if (counter == bufferSize) { val buffer = RealBuffer(array) emit(buffer) diff --git a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt index 5686b0ac0..c0df59645 100644 --- a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt +++ b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt @@ -5,13 +5,12 @@ import kotlinx.coroutines.runBlocking /** * Represent a chain as regular iterator (uses blocking calls) */ -operator fun Chain.iterator(): Iterator = object : Iterator { +public operator fun Chain.iterator(): Iterator = object : Iterator { override fun hasNext(): Boolean = true - override fun next(): R = runBlocking { next() } } /** * Represent a chain as a sequence */ -fun Chain.asSequence(): Sequence = Sequence { this@asSequence.iterator() } \ No newline at end of file +public fun Chain.asSequence(): Sequence = Sequence { this@asSequence.iterator() } diff --git a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt index a607d2d85..82950159b 100644 --- a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt +++ b/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt @@ -37,10 +37,10 @@ public class LazyNDStructure( } public fun NDStructure.deferred(index: IntArray): Deferred = - if (this is LazyNDStructure) this.deferred(index) else CompletableDeferred(get(index)) + if (this is LazyNDStructure) deferred(index) else CompletableDeferred(get(index)) public suspend fun NDStructure.await(index: IntArray): T = - if (this is LazyNDStructure) this.await(index) else get(index) + if (this is LazyNDStructure) await(index) else get(index) /** * PENDING would benefit from KEEP-176 diff --git a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt b/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt index 427349072..d17e4d86b 100644 --- a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt +++ b/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt @@ -14,7 +14,7 @@ import kotlin.test.Test @ExperimentalCoroutinesApi @InternalCoroutinesApi @FlowPreview -class BufferFlowTest { +internal class BufferFlowTest { val dispatcher: CoroutineDispatcher = Executors.newFixedThreadPool(4).asCoroutineDispatcher() @Test diff --git a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt b/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt index c84ef89ef..630749861 100644 --- a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt +++ b/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt @@ -6,7 +6,7 @@ import scientifik.kmath.structures.asSequence import kotlin.test.Test import kotlin.test.assertEquals -class RingBufferTest { +internal class RingBufferTest { @Test fun push() { val buffer = RingBuffer.build(20, Double.NaN) diff --git a/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt b/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt index 8dabdeeac..dc7acdcc2 100644 --- a/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt +++ b/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt @@ -5,7 +5,7 @@ import scientifik.kmath.dimensions.D3 import scientifik.kmath.dimensions.DMatrixContext import kotlin.test.Test -class DMatrixContextTest { +internal class DMatrixContextTest { @Test fun testDimensionSafeMatrix() { val res = with(DMatrixContext.real) { @@ -26,4 +26,4 @@ class DMatrixContextTest { m1.transpose() + m2 } } -} \ No newline at end of file +} diff --git a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt index e5cc451d1..139f77e92 100644 --- a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt @@ -2,21 +2,17 @@ package scientifik.kmath.dimensions import kotlin.reflect.KClass -private val dimensionMap = hashMapOf( - 1u to D1, - 2u to D2, - 3u to D3 -) +private val dimensionMap: MutableMap = hashMapOf(1u to D1, 2u to D2, 3u to D3) @Suppress("UNCHECKED_CAST") -public actual fun Dimension.Companion.resolve(type: KClass): D { - return dimensionMap.entries.find { it.value::class == type }?.value as? D ?: error("Can't resolve dimension $type") -} +public actual fun Dimension.Companion.resolve(type: KClass): D = dimensionMap + .entries + .map(MutableMap.MutableEntry::value) + .find { it::class == type } as? D + ?: error("Can't resolve dimension $type") -public actual fun Dimension.Companion.of(dim: UInt): Dimension { - return dimensionMap.getOrPut(dim) { - object : Dimension { - override val dim: UInt get() = dim - } +public actual fun Dimension.Companion.of(dim: UInt): Dimension = dimensionMap.getOrPut(dim) { + object : Dimension { + override val dim: UInt get() = dim } -} \ No newline at end of file +} diff --git a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt index 42310cb3a..714133ecb 100644 --- a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt @@ -2,17 +2,15 @@ package scientifik.kmath.dimensions import kotlin.reflect.KClass -public actual fun Dimension.Companion.resolve(type: KClass): D{ - return type.objectInstance ?: error("No object instance for dimension class") -} +public actual fun Dimension.Companion.resolve(type: KClass): D = + type.objectInstance ?: error("No object instance for dimension class") -public actual fun Dimension.Companion.of(dim: UInt): Dimension{ - return when(dim){ - 1u -> D1 - 2u -> D2 - 3u -> D3 - else -> object : Dimension { - override val dim: UInt get() = dim - } +public actual fun Dimension.Companion.of(dim: UInt): Dimension = when (dim) { + 1u -> D1 + 2u -> D2 + 3u -> D3 + + else -> object : Dimension { + override val dim: UInt get() = dim } } \ No newline at end of file diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt index 8c6d5fae4..474a701ca 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt @@ -14,11 +14,11 @@ import kotlin.math.sqrt public typealias RealPoint = Point -public fun DoubleArray.asVector(): RealVector = RealVector(this.asBuffer()) -public fun List.asVector(): RealVector = RealVector(this.asBuffer()) +public fun DoubleArray.asVector(): RealVector = RealVector(asBuffer()) +public fun List.asVector(): RealVector = RealVector(asBuffer()) public object VectorL2Norm : Norm, Double> { - override fun norm(arg: Point): Double = sqrt(arg.asIterable().sumByDouble { it.toDouble() }) + override fun norm(arg: Point): Double = sqrt(arg.asIterable().sumByDouble(Number::toDouble)) } public inline class RealVector(private val point: Point) : @@ -27,13 +27,9 @@ public inline class RealVector(private val point: Point) : public override val context: VectorSpace get() = space(point.size) public override fun unwrap(): RealPoint = point - public override fun RealPoint.wrap(): RealVector = RealVector(this) - - - override operator fun get(index: Int): Double = point[index] - - override operator fun iterator(): Iterator = point.iterator() + public override operator fun get(index: Int): Double = point[index] + public override operator fun iterator(): Iterator = point.iterator() public companion object { private val spaceCache: MutableMap> = hashMapOf() diff --git a/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt b/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt index 8918fb300..baf1db8b5 100644 --- a/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt +++ b/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt @@ -8,7 +8,7 @@ import kotlin.test.Test import kotlin.test.assertEquals import kotlin.test.assertTrue -class RealMatrixTest { +internal class RealMatrixTest { @Test fun testSum() { val m = realMatrix(10, 10) { i, j -> (i + j).toDouble() } diff --git a/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt b/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt index ef7f40afe..e24037953 100644 --- a/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt +++ b/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt @@ -5,7 +5,7 @@ import scientifik.kmath.real.RealVector import kotlin.test.Test import kotlin.test.assertEquals -class VectorTest { +internal class VectorTest { @Test fun testSum() { val vector1 = RealVector(5) { it.toDouble() } diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt index f0dc49882..a5318b709 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt @@ -5,28 +5,28 @@ import scientifik.kmath.operations.SpaceElement import scientifik.kmath.operations.invoke import kotlin.math.sqrt +public interface Vector2D : Point, Vector, SpaceElement { + public val x: Double + public val y: Double + public override val context: Euclidean2DSpace get() = Euclidean2DSpace + public override val size: Int get() = 2 -interface Vector2D : Point, Vector, SpaceElement { - val x: Double - val y: Double - override val context: Euclidean2DSpace get() = Euclidean2DSpace - override val size: Int get() = 2 - - override operator fun get(index: Int): Double = when (index) { + public override operator fun get(index: Int): Double = when (index) { 1 -> x 2 -> y else -> error("Accessing outside of point bounds") } - override operator fun iterator(): Iterator = listOf(x, y).iterator() - override fun unwrap(): Vector2D = this - override fun Vector2D.wrap(): Vector2D = this + public override operator fun iterator(): Iterator = listOf(x, y).iterator() + public override fun unwrap(): Vector2D = this + public override fun Vector2D.wrap(): Vector2D = this } -val Vector2D.r: Double get() = Euclidean2DSpace { sqrt(norm()) } +public val Vector2D.r: Double + get() = Euclidean2DSpace { sqrt(norm()) } @Suppress("FunctionName") -fun Vector2D(x: Double, y: Double): Vector2D = Vector2DImpl(x, y) +public fun Vector2D(x: Double, y: Double): Vector2D = Vector2DImpl(x, y) private data class Vector2DImpl( override val x: Double, @@ -36,19 +36,12 @@ private data class Vector2DImpl( /** * 2D Euclidean space */ -object Euclidean2DSpace : GeometrySpace { - fun Vector2D.norm(): Double = sqrt(x * x + y * y) +public object Euclidean2DSpace : GeometrySpace { + public override val zero: Vector2D by lazy { Vector2D(0.0, 0.0) } - override fun Vector2D.distanceTo(other: Vector2D): Double = (this - other).norm() - - override fun add(a: Vector2D, b: Vector2D): Vector2D = - Vector2D(a.x + b.x, a.y + b.y) - - override fun multiply(a: Vector2D, k: Number): Vector2D = - Vector2D(a.x * k.toDouble(), a.y * k.toDouble()) - - override val zero: Vector2D = Vector2D(0.0, 0.0) - - override fun Vector2D.dot(other: Vector2D): Double = - x * other.x + y * other.y -} \ No newline at end of file + public fun Vector2D.norm(): Double = sqrt(x * x + y * y) + public override fun Vector2D.distanceTo(other: Vector2D): Double = (this - other).norm() + public override fun add(a: Vector2D, b: Vector2D): Vector2D = Vector2D(a.x + b.x, a.y + b.y) + public override fun multiply(a: Vector2D, k: Number): Vector2D = Vector2D(a.x * k.toDouble(), a.y * k.toDouble()) + public override fun Vector2D.dot(other: Vector2D): Double = x * other.x + y * other.y +} diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt index 3748e58c7..f695c0f64 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt @@ -5,32 +5,29 @@ import scientifik.kmath.operations.SpaceElement import scientifik.kmath.operations.invoke import kotlin.math.sqrt +public interface Vector3D : Point, Vector, SpaceElement { + public val x: Double + public val y: Double + public val z: Double + public override val context: Euclidean3DSpace get() = Euclidean3DSpace + public override val size: Int get() = 3 -interface Vector3D : Point, Vector, SpaceElement { - val x: Double - val y: Double - val z: Double - override val context: Euclidean3DSpace get() = Euclidean3DSpace - override val size: Int get() = 3 - - override operator fun get(index: Int): Double = when (index) { + public override operator fun get(index: Int): Double = when (index) { 1 -> x 2 -> y 3 -> z else -> error("Accessing outside of point bounds") } - override operator fun iterator(): Iterator = listOf(x, y, z).iterator() - - override fun unwrap(): Vector3D = this - - override fun Vector3D.wrap(): Vector3D = this + public override operator fun iterator(): Iterator = listOf(x, y, z).iterator() + public override fun unwrap(): Vector3D = this + public override fun Vector3D.wrap(): Vector3D = this } @Suppress("FunctionName") -fun Vector3D(x: Double, y: Double, z: Double): Vector3D = Vector3DImpl(x, y, z) +public fun Vector3D(x: Double, y: Double, z: Double): Vector3D = Vector3DImpl(x, y, z) -val Vector3D.r: Double get() = Euclidean3DSpace { sqrt(norm()) } +public val Vector3D.r: Double get() = Euclidean3DSpace { sqrt(norm()) } private data class Vector3DImpl( override val x: Double, @@ -38,19 +35,19 @@ private data class Vector3DImpl( override val z: Double ) : Vector3D -object Euclidean3DSpace : GeometrySpace { - override val zero: Vector3D = Vector3D(0.0, 0.0, 0.0) +public object Euclidean3DSpace : GeometrySpace { + public override val zero: Vector3D by lazy { Vector3D(0.0, 0.0, 0.0) } - fun Vector3D.norm(): Double = sqrt(x * x + y * y + z * z) + public fun Vector3D.norm(): Double = sqrt(x * x + y * y + z * z) - override fun Vector3D.distanceTo(other: Vector3D): Double = (this - other).norm() + public override fun Vector3D.distanceTo(other: Vector3D): Double = (this - other).norm() - override fun add(a: Vector3D, b: Vector3D): Vector3D = + public override fun add(a: Vector3D, b: Vector3D): Vector3D = Vector3D(a.x + b.x, a.y + b.y, a.z + b.z) - override fun multiply(a: Vector3D, k: Number): Vector3D = + public override fun multiply(a: Vector3D, k: Number): Vector3D = Vector3D(a.x * k.toDouble(), a.y * k.toDouble(), a.z * k.toDouble()) - override fun Vector3D.dot(other: Vector3D): Double = + public override fun Vector3D.dot(other: Vector3D): Double = x * other.x + y * other.y + z * other.z } diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt index b65a8dd3a..6798a6291 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt @@ -2,16 +2,16 @@ package scientifik.kmath.geometry import scientifik.kmath.operations.Space -interface Vector +public interface Vector -interface GeometrySpace: Space { +public interface GeometrySpace: Space { /** * L2 distance */ - fun V.distanceTo(other: V): Double + public fun V.distanceTo(other: V): Double /** * Scalar product */ - infix fun V.dot(other: V): Double + public infix fun V.dot(other: V): Double } \ No newline at end of file diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt index d802a103f..a529f7f1b 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt +++ b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt @@ -1,6 +1,6 @@ package scientifik.kmath.geometry -data class Line(val base: V, val direction: V) +public data class Line(val base: V, val direction: V) -typealias Line2D = Line -typealias Line3D = Line +public typealias Line2D = Line +public typealias Line3D = Line diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt index 420e38ce2..49bf3793c 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt +++ b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt @@ -1,4 +1,3 @@ package scientifik.kmath.geometry -interface ReferenceFrame { -} \ No newline at end of file +public interface ReferenceFrame diff --git a/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt b/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt index bd8fa782a..139b8cc8d 100644 --- a/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt +++ b/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt @@ -7,67 +7,64 @@ import scientifik.kmath.operations.invoke import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.NDStructure -class KomaMatrixContext( +public class KomaMatrixContext( private val factory: MatrixFactory>, private val space: Space ) : MatrixContext { - - override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): KomaMatrix = + public override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): KomaMatrix = KomaMatrix(factory.zeros(rows, columns).fill(initializer)) - fun Matrix.toKoma(): KomaMatrix = if (this is KomaMatrix) { + public fun Matrix.toKoma(): KomaMatrix = if (this is KomaMatrix) this - } else { + else produce(rowNum, colNum) { i, j -> get(i, j) } - } - fun Point.toKoma(): KomaVector = if (this is KomaVector) { + public fun Point.toKoma(): KomaVector = if (this is KomaVector) this - } else { + else KomaVector(factory.zeros(size, 1).fill { i, _ -> get(i) }) - } - - override fun Matrix.dot(other: Matrix): KomaMatrix = + public override fun Matrix.dot(other: Matrix): KomaMatrix = KomaMatrix(toKoma().origin * other.toKoma().origin) - override fun Matrix.dot(vector: Point): KomaVector = + public override fun Matrix.dot(vector: Point): KomaVector = KomaVector(toKoma().origin * vector.toKoma().origin) - override operator fun Matrix.unaryMinus(): KomaMatrix = + public override operator fun Matrix.unaryMinus(): KomaMatrix = KomaMatrix(toKoma().origin.unaryMinus()) - override fun add(a: Matrix, b: Matrix): KomaMatrix = + public override fun add(a: Matrix, b: Matrix): KomaMatrix = KomaMatrix(a.toKoma().origin + b.toKoma().origin) - override operator fun Matrix.minus(b: Matrix): KomaMatrix = + public override operator fun Matrix.minus(b: Matrix): KomaMatrix = KomaMatrix(toKoma().origin - b.toKoma().origin) - override fun multiply(a: Matrix, k: Number): Matrix = + public override fun multiply(a: Matrix, k: Number): Matrix = produce(a.rowNum, a.colNum) { i, j -> space { a[i, j] * k } } - override operator fun Matrix.times(value: T): KomaMatrix = + public override operator fun Matrix.times(value: T): KomaMatrix = KomaMatrix(toKoma().origin * value) - companion object + public companion object } -fun KomaMatrixContext.solve(a: Matrix, b: Matrix) = +public fun KomaMatrixContext.solve(a: Matrix, b: Matrix): KomaMatrix = KomaMatrix(a.toKoma().origin.solve(b.toKoma().origin)) -fun KomaMatrixContext.solve(a: Matrix, b: Point) = +public fun KomaMatrixContext.solve(a: Matrix, b: Point): KomaVector = KomaVector(a.toKoma().origin.solve(b.toKoma().origin)) -fun KomaMatrixContext.inverse(a: Matrix) = +public fun KomaMatrixContext.inverse(a: Matrix): KomaMatrix = KomaMatrix(a.toKoma().origin.inv()) -class KomaMatrix(val origin: koma.matrix.Matrix, features: Set? = null) : FeaturedMatrix { - override val rowNum: Int get() = origin.numRows() - override val colNum: Int get() = origin.numCols() +public class KomaMatrix(public val origin: koma.matrix.Matrix, features: Set? = null) : + FeaturedMatrix { + public override val rowNum: Int get() = origin.numRows() + public override val colNum: Int get() = origin.numCols() - override val shape: IntArray get() = intArrayOf(origin.numRows(), origin.numCols()) + public override val shape: IntArray get() = intArrayOf(origin.numRows(), origin.numCols()) - override val features: Set = features ?: hashSetOf( + public override val features: Set = features ?: hashSetOf( object : DeterminantFeature { override val determinant: T get() = origin.det() }, @@ -94,11 +91,9 @@ class KomaMatrix(val origin: koma.matrix.Matrix, features: Set internal constructor(val origin: koma.matrix.Matrix) : Point { +public class KomaVector internal constructor(public val origin: koma.matrix.Matrix) : Point { override val size: Int get() = origin.numRows() init { diff --git a/kmath-prob/build.gradle.kts b/kmath-prob/build.gradle.kts index 4c9663e5f..795a8760e 100644 --- a/kmath-prob/build.gradle.kts +++ b/kmath-prob/build.gradle.kts @@ -13,4 +13,8 @@ kotlin.sourceSets { api("org.apache.commons:commons-rng-simple:1.3") } } + + jvmTest { + languageSettings.useExperimentalAnnotation("kotlinx.coroutines.FlowPreview") + } } diff --git a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt b/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt index 7638c695e..0680083ce 100644 --- a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt +++ b/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt @@ -6,7 +6,7 @@ import kotlinx.coroutines.runBlocking import org.junit.jupiter.api.Assertions import org.junit.jupiter.api.Test -class CommonsDistributionsTest { +internal class CommonsDistributionsTest { @Test fun testNormalDistributionSuspend() { val distribution = Distribution.normal(7.0, 2.0) @@ -24,5 +24,4 @@ class CommonsDistributionsTest { val sample = distribution.sample(generator).nextBlock(1000) Assertions.assertEquals(7.0, sample.average(), 0.1) } - -} \ No newline at end of file +} diff --git a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt b/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt index 2613f71d5..30789a004 100644 --- a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt +++ b/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt @@ -7,12 +7,14 @@ import kotlinx.coroutines.runBlocking import scientifik.kmath.streaming.chunked import kotlin.test.Test -class StatisticTest { +internal class StatisticTest { //create a random number generator. val generator = RandomGenerator.default(1) + //Create a stateless chain from generator. val data = generator.chain { nextDouble() } - //Convert a chaint to Flow and break it into chunks. + + //Convert a chain to Flow and break it into chunks. val chunked = data.chunked(1000) @Test @@ -22,7 +24,8 @@ class StatisticTest { .flow(chunked) //create a flow with results .drop(99) // Skip first 99 values and use one with total data .first() //get 1e5 data samples average + println(average) } } -} \ No newline at end of file +} diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt index 84e927721..64f2da4c1 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt +++ b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt @@ -5,82 +5,84 @@ import scientifik.kmath.operations.RealField import scientifik.kmath.structures.DefaultStrides import scientifik.kmath.structures.MutableNDStructure import scientifik.kmath.structures.NDField +import scientifik.kmath.structures.Strides @Suppress("OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -inline class ViktorNDStructure(val f64Buffer: F64Array) : MutableNDStructure { +public inline class ViktorNDStructure(public val f64Buffer: F64Array) : MutableNDStructure { + public override val shape: IntArray get() = f64Buffer.shape - override val shape: IntArray get() = f64Buffer.shape + public override inline fun get(index: IntArray): Double = f64Buffer.get(*index) - override inline fun get(index: IntArray): Double = f64Buffer.get(*index) - - override inline fun set(index: IntArray, value: Double) { + public override inline fun set(index: IntArray, value: Double) { f64Buffer.set(*index, value = value) } - override fun elements(): Sequence> { - return DefaultStrides(shape).indices().map { it to get(it) } - } + public override fun elements(): Sequence> = + DefaultStrides(shape).indices().map { it to get(it) } } -fun F64Array.asStructure(): ViktorNDStructure = ViktorNDStructure(this) +public fun F64Array.asStructure(): ViktorNDStructure = ViktorNDStructure(this) @Suppress("OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") -class ViktorNDField(override val shape: IntArray) : NDField { - override val zero: ViktorNDStructure +public class ViktorNDField(public override val shape: IntArray) : NDField { + public override val zero: ViktorNDStructure get() = F64Array.full(init = 0.0, shape = *shape).asStructure() - override val one: ViktorNDStructure + + public override val one: ViktorNDStructure get() = F64Array.full(init = 1.0, shape = *shape).asStructure() - val strides = DefaultStrides(shape) + public val strides: Strides = DefaultStrides(shape) - override val elementContext: RealField get() = RealField + public override val elementContext: RealField get() = RealField - override fun produce(initializer: RealField.(IntArray) -> Double): ViktorNDStructure = F64Array(*shape).apply { - this@ViktorNDField.strides.indices().forEach { index -> - set(value = RealField.initializer(index), indices = *index) - } - }.asStructure() - - override fun map(arg: ViktorNDStructure, transform: RealField.(Double) -> Double): ViktorNDStructure = + public override fun produce(initializer: RealField.(IntArray) -> Double): ViktorNDStructure = F64Array(*shape).apply { this@ViktorNDField.strides.indices().forEach { index -> - set(value = RealField.transform(arg[index]), indices = *index) + set(value = RealField.initializer(index), indices = index) } }.asStructure() - override fun mapIndexed( + public override fun map(arg: ViktorNDStructure, transform: RealField.(Double) -> Double): ViktorNDStructure = + F64Array(*shape).apply { + this@ViktorNDField.strides.indices().forEach { index -> + set(value = RealField.transform(arg[index]), indices = index) + } + }.asStructure() + + public override fun mapIndexed( arg: ViktorNDStructure, transform: RealField.(index: IntArray, Double) -> Double ): ViktorNDStructure = F64Array(*shape).apply { this@ViktorNDField.strides.indices().forEach { index -> - set(value = RealField.transform(index, arg[index]), indices = *index) + set(value = RealField.transform(index, arg[index]), indices = index) } }.asStructure() - override fun combine( + public override fun combine( a: ViktorNDStructure, b: ViktorNDStructure, transform: RealField.(Double, Double) -> Double ): ViktorNDStructure = F64Array(*shape).apply { this@ViktorNDField.strides.indices().forEach { index -> - set(value = RealField.transform(a[index], b[index]), indices = *index) + set(value = RealField.transform(a[index], b[index]), indices = index) } }.asStructure() - override fun add(a: ViktorNDStructure, b: ViktorNDStructure): ViktorNDStructure { - return (a.f64Buffer + b.f64Buffer).asStructure() - } + public override fun add(a: ViktorNDStructure, b: ViktorNDStructure): ViktorNDStructure = + (a.f64Buffer + b.f64Buffer).asStructure() - override fun multiply(a: ViktorNDStructure, k: Number): ViktorNDStructure = + public override fun multiply(a: ViktorNDStructure, k: Number): ViktorNDStructure = (a.f64Buffer * k.toDouble()).asStructure() - override inline fun ViktorNDStructure.plus(b: ViktorNDStructure): ViktorNDStructure = + public override inline fun ViktorNDStructure.plus(b: ViktorNDStructure): ViktorNDStructure = (f64Buffer + b.f64Buffer).asStructure() - override inline fun ViktorNDStructure.minus(b: ViktorNDStructure): ViktorNDStructure = + public override inline fun ViktorNDStructure.minus(b: ViktorNDStructure): ViktorNDStructure = (f64Buffer - b.f64Buffer).asStructure() - override inline fun ViktorNDStructure.times(k: Number): ViktorNDStructure = (f64Buffer * k.toDouble()).asStructure() + public override inline fun ViktorNDStructure.times(k: Number): ViktorNDStructure = + (f64Buffer * k.toDouble()).asStructure() - override inline fun ViktorNDStructure.plus(arg: Double): ViktorNDStructure = (f64Buffer.plus(arg)).asStructure() + public override inline fun ViktorNDStructure.plus(arg: Double): ViktorNDStructure = + (f64Buffer.plus(arg)).asStructure() } \ No newline at end of file From fc5ec8fed74b0a4f27d212a9e78e61d6cd9794bb Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Wed, 9 Sep 2020 22:31:54 +0700 Subject: [PATCH 06/26] Drop koma support, add more explicit visibility modifiers --- README.md | 3 - doc/features.md | 3 - examples/build.gradle.kts | 3 - .../kmath/structures/ArrayBenchmark.kt | 29 ++-- .../ast/ExpressionsInterpretersBenchmark.kt | 140 +++++++++--------- .../kmath/linear/LinearAlgebraBenchmark.kt | 55 ------- .../kmath/linear/MultiplicationBenchmark.kt | 49 ------ kmath-commons/build.gradle.kts | 2 +- .../kotlin/scientifik/kmath/chains/Chain.kt | 25 ++-- .../scientifik/kmath/functions/functions.kt | 2 +- .../scientifik/kmath/histogram/Histogram.kt | 1 - .../kmath/histogram/UnivariateHistogram.kt | 4 +- kmath-koma/build.gradle.kts | 30 ---- .../scientifik.kmath.linear/KomaMatrix.kt | 105 ------------- .../scientifik/kmath/prob/Distribution.kt | 2 +- .../kmath/prob/FactorizedDistribution.kt | 30 ++-- .../scientifik/kmath/prob/RandomChain.kt | 7 +- .../scientifik/kmath/prob/RandomGenerator.kt | 55 +++---- .../scientifik/kmath/prob/SamplerAlgebra.kt | 17 +-- .../kotlin/scientifik/kmath/prob/Statistic.kt | 44 +++--- .../kmath/prob/UniformDistribution.kt | 34 ++--- .../scientifik/kmath/prob/distributions.kt | 12 +- settings.gradle.kts | 4 +- 23 files changed, 182 insertions(+), 474 deletions(-) delete mode 100644 examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt delete mode 100644 examples/src/main/kotlin/scientifik/kmath/linear/MultiplicationBenchmark.kt delete mode 100644 kmath-koma/build.gradle.kts delete mode 100644 kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt diff --git a/README.md b/README.md index 24a7d7a4a..08d1e988a 100644 --- a/README.md +++ b/README.md @@ -54,9 +54,6 @@ can be used for a wide variety of purposes from high performance calculations to library in Kotlin code and maybe rewrite some parts to better suit the Kotlin programming paradigm, however there is no fixed roadmap for that. Feel free to submit a feature request if you want something to be done first. -* **Koma wrapper** [Koma](https://github.com/kyonifer/koma) is a well established numerics library in Kotlin, specifically linear algebra. -The plan is to have wrappers for koma implementations for compatibility with kmath API. - ## Planned features * **Messaging** A mathematical notation to support multi-language and multi-node communication for mathematical tasks. diff --git a/doc/features.md b/doc/features.md index e6a820c1e..0f2c4203f 100644 --- a/doc/features.md +++ b/doc/features.md @@ -12,6 +12,3 @@ api and multiple library back-ends. * [Expressions](./expressions.md) * Commons math integration - -* Koma integration - diff --git a/examples/build.gradle.kts b/examples/build.gradle.kts index 2c51574e5..40da41d2b 100644 --- a/examples/build.gradle.kts +++ b/examples/build.gradle.kts @@ -10,7 +10,6 @@ plugins { allOpen.annotation("org.openjdk.jmh.annotations.State") repositories { - maven("http://dl.bintray.com/kyonifer/maven") maven("https://dl.bintray.com/mipt-npm/scientifik") maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlin-dev/") @@ -25,10 +24,8 @@ dependencies { implementation(project(":kmath-coroutines")) implementation(project(":kmath-commons")) implementation(project(":kmath-prob")) - implementation(project(":kmath-koma")) implementation(project(":kmath-viktor")) implementation(project(":kmath-dimensions")) - implementation("com.kyonifer:koma-core-ejml:0.12") implementation("org.jetbrains.kotlinx:kotlinx-io-jvm:0.2.0-npm-dev-6") implementation("org.jetbrains.kotlinx:kotlinx.benchmark.runtime:0.2.0-dev-20") "benchmarksCompile"(sourceSets.main.get().output + sourceSets.main.get().compileClasspath) //sourceSets.main.output + sourceSets.main.runtimeClasspath diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt b/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt index d605e1b9c..2ccb27871 100644 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt +++ b/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt @@ -5,44 +5,33 @@ import org.openjdk.jmh.annotations.Scope import org.openjdk.jmh.annotations.State import java.nio.IntBuffer - @State(Scope.Benchmark) class ArrayBenchmark { - @Benchmark fun benchmarkArrayRead() { var res = 0 - for (i in 1..size) { - res += array[size - i] - } + for (i in 1..size) res += array[size - i] } @Benchmark fun benchmarkBufferRead() { var res = 0 - for (i in 1..size) { - res += arrayBuffer.get(size - i) - } + for (i in 1..size) res += arrayBuffer.get(size - i) } @Benchmark fun nativeBufferRead() { var res = 0 - for (i in 1..size) { - res += nativeBuffer.get(size - i) - } + for (i in 1..size) res += nativeBuffer.get(size - i) } companion object { - val size = 1000 - - val array = IntArray(size) { it } - val arrayBuffer = IntBuffer.wrap(array) - val nativeBuffer = IntBuffer.allocate(size).also { - for (i in 0 until size) { - it.put(i, i) - } + const val size: Int = 1000 + val array: IntArray = IntArray(size) { it } + val arrayBuffer: IntBuffer = IntBuffer.wrap(array) + val nativeBuffer: IntBuffer = IntBuffer.allocate(size).also { + for (i in 0 until size) it.put(i, i) } } -} \ No newline at end of file +} diff --git a/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt index 17a70a4aa..80e70d149 100644 --- a/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt +++ b/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt @@ -1,70 +1,70 @@ -package scientifik.kmath.ast - -import scientifik.kmath.asm.compile -import scientifik.kmath.expressions.Expression -import scientifik.kmath.expressions.expressionInField -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.RealField -import kotlin.random.Random -import kotlin.system.measureTimeMillis - -class ExpressionsInterpretersBenchmark { - private val algebra: Field = RealField - fun functionalExpression() { - val expr = algebra.expressionInField { - variable("x") * const(2.0) + const(2.0) / variable("x") - const(16.0) - } - - invokeAndSum(expr) - } - - fun mstExpression() { - val expr = algebra.mstInField { - symbol("x") * number(2.0) + number(2.0) / symbol("x") - number(16.0) - } - - invokeAndSum(expr) - } - - fun asmExpression() { - val expr = algebra.mstInField { - symbol("x") * number(2.0) + number(2.0) / symbol("x") - number(16.0) - }.compile() - - invokeAndSum(expr) - } - - private fun invokeAndSum(expr: Expression) { - val random = Random(0) - var sum = 0.0 - - repeat(1000000) { - sum += expr("x" to random.nextDouble()) - } - - println(sum) - } -} - -fun main() { - val benchmark = ExpressionsInterpretersBenchmark() - - val fe = measureTimeMillis { - benchmark.functionalExpression() - } - - println("fe=$fe") - - val mst = measureTimeMillis { - benchmark.mstExpression() - } - - println("mst=$mst") - - val asm = measureTimeMillis { - benchmark.asmExpression() - } - - println("asm=$asm") -} +//package scientifik.kmath.ast +// +//import scientifik.kmath.asm.compile +//import scientifik.kmath.expressions.Expression +//import scientifik.kmath.expressions.expressionInField +//import scientifik.kmath.expressions.invoke +//import scientifik.kmath.operations.Field +//import scientifik.kmath.operations.RealField +//import kotlin.random.Random +//import kotlin.system.measureTimeMillis +// +//class ExpressionsInterpretersBenchmark { +// private val algebra: Field = RealField +// fun functionalExpression() { +// val expr = algebra.expressionInField { +// variable("x") * const(2.0) + const(2.0) / variable("x") - const(16.0) +// } +// +// invokeAndSum(expr) +// } +// +// fun mstExpression() { +// val expr = algebra.mstInField { +// symbol("x") * number(2.0) + number(2.0) / symbol("x") - number(16.0) +// } +// +// invokeAndSum(expr) +// } +// +// fun asmExpression() { +// val expr = algebra.mstInField { +// symbol("x") * number(2.0) + number(2.0) / symbol("x") - number(16.0) +// }.compile() +// +// invokeAndSum(expr) +// } +// +// private fun invokeAndSum(expr: Expression) { +// val random = Random(0) +// var sum = 0.0 +// +// repeat(1000000) { +// sum += expr("x" to random.nextDouble()) +// } +// +// println(sum) +// } +//} +// +//fun main() { +// val benchmark = ExpressionsInterpretersBenchmark() +// +// val fe = measureTimeMillis { +// benchmark.functionalExpression() +// } +// +// println("fe=$fe") +// +// val mst = measureTimeMillis { +// benchmark.mstExpression() +// } +// +// println("mst=$mst") +// +// val asm = measureTimeMillis { +// benchmark.asmExpression() +// } +// +// println("asm=$asm") +//} diff --git a/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt deleted file mode 100644 index 6cc5411b8..000000000 --- a/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt +++ /dev/null @@ -1,55 +0,0 @@ -package scientifik.kmath.linear - -import koma.matrix.ejml.EJMLMatrixFactory -import scientifik.kmath.commons.linear.CMMatrixContext -import scientifik.kmath.commons.linear.inverse -import scientifik.kmath.commons.linear.toCM -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.Matrix -import kotlin.contracts.ExperimentalContracts -import kotlin.random.Random -import kotlin.system.measureTimeMillis - -@ExperimentalContracts -fun main() { - val random = Random(1224) - val dim = 100 - //creating invertible matrix - val u = Matrix.real(dim, dim) { i, j -> if (i <= j) random.nextDouble() else 0.0 } - val l = Matrix.real(dim, dim) { i, j -> if (i >= j) random.nextDouble() else 0.0 } - val matrix = l dot u - - val n = 5000 // iterations - - MatrixContext.real { - repeat(50) { val res = inverse(matrix) } - val inverseTime = measureTimeMillis { repeat(n) { val res = inverse(matrix) } } - println("[kmath] Inversion of $n matrices $dim x $dim finished in $inverseTime millis") - } - - //commons-math - - val commonsTime = measureTimeMillis { - CMMatrixContext { - val cm = matrix.toCM() //avoid overhead on conversion - repeat(n) { val res = inverse(cm) } - } - } - - - println("[commons-math] Inversion of $n matrices $dim x $dim finished in $commonsTime millis") - - //koma-ejml - - val komaTime = measureTimeMillis { - (KomaMatrixContext(EJMLMatrixFactory(), RealField)) { - val km = matrix.toKoma() //avoid overhead on conversion - repeat(n) { - val res = inverse(km) - } - } - } - - println("[koma-ejml] Inversion of $n matrices $dim x $dim finished in $komaTime millis") -} \ No newline at end of file diff --git a/examples/src/main/kotlin/scientifik/kmath/linear/MultiplicationBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/linear/MultiplicationBenchmark.kt deleted file mode 100644 index 3ae550682..000000000 --- a/examples/src/main/kotlin/scientifik/kmath/linear/MultiplicationBenchmark.kt +++ /dev/null @@ -1,49 +0,0 @@ -package scientifik.kmath.linear - -import koma.matrix.ejml.EJMLMatrixFactory -import scientifik.kmath.commons.linear.CMMatrixContext -import scientifik.kmath.commons.linear.toCM -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.Matrix -import kotlin.random.Random -import kotlin.system.measureTimeMillis - -fun main() { - val random = Random(12224) - val dim = 1000 - //creating invertible matrix - val matrix1 = Matrix.real(dim, dim) { i, j -> if (i <= j) random.nextDouble() else 0.0 } - val matrix2 = Matrix.real(dim, dim) { i, j -> if (i <= j) random.nextDouble() else 0.0 } - -// //warmup -// matrix1 dot matrix2 - - CMMatrixContext { - val cmMatrix1 = matrix1.toCM() - val cmMatrix2 = matrix2.toCM() - - val cmTime = measureTimeMillis { - cmMatrix1 dot cmMatrix2 - } - - println("CM implementation time: $cmTime") - } - - (KomaMatrixContext(EJMLMatrixFactory(), RealField)) { - val komaMatrix1 = matrix1.toKoma() - val komaMatrix2 = matrix2.toKoma() - - val komaTime = measureTimeMillis { - komaMatrix1 dot komaMatrix2 - } - - println("Koma-ejml implementation time: $komaTime") - } - - val genericTime = measureTimeMillis { - val res = matrix1 dot matrix2 - } - - println("Generic implementation time: $genericTime") -} \ No newline at end of file diff --git a/kmath-commons/build.gradle.kts b/kmath-commons/build.gradle.kts index 45eee7765..b64b855a4 100644 --- a/kmath-commons/build.gradle.kts +++ b/kmath-commons/build.gradle.kts @@ -5,6 +5,6 @@ dependencies { api(project(":kmath-core")) api(project(":kmath-coroutines")) api(project(":kmath-prob")) - api(project(":kmath-functions")) +// api(project(":kmath-functions")) api("org.apache.commons:commons-math3:3.6.1") } diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt index bf79c1601..e27290fbb 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt @@ -43,7 +43,6 @@ public interface Chain : Flow { public companion object } - public fun Iterator.asChain(): Chain = SimpleChain { next() } public fun Sequence.asChain(): Chain = iterator().asChain() @@ -51,22 +50,20 @@ public fun Sequence.asChain(): Chain = iterator().asChain() * A simple chain of independent tokens */ public class SimpleChain(private val gen: suspend () -> R) : Chain { - override suspend fun next(): R = gen() - override fun fork(): Chain = this + public override suspend fun next(): R = gen() + public override fun fork(): Chain = this } /** * A stateless Markov chain */ public class MarkovChain(private val seed: suspend () -> R, private val gen: suspend (R) -> R) : Chain { - - private val mutex = Mutex() - + private val mutex: Mutex = Mutex() private var value: R? = null public fun value(): R? = value - override suspend fun next(): R { + public override suspend fun next(): R { mutex.withLock { val newValue = gen(value ?: seed()) value = newValue @@ -74,9 +71,7 @@ public class MarkovChain(private val seed: suspend () -> R, private } } - override fun fork(): Chain { - return MarkovChain(seed = { value ?: seed() }, gen = gen) - } + public override fun fork(): Chain = MarkovChain(seed = { value ?: seed() }, gen = gen) } /** @@ -91,12 +86,11 @@ public class StatefulChain( private val gen: suspend S.(R) -> R ) : Chain { private val mutex: Mutex = Mutex() - private var value: R? = null public fun value(): R? = value - override suspend fun next(): R { + public override suspend fun next(): R { mutex.withLock { val newValue = state.gen(value ?: state.seed()) value = newValue @@ -104,16 +98,15 @@ public class StatefulChain( } } - override fun fork(): Chain = StatefulChain(forkState(state), seed, forkState, gen) + public override fun fork(): Chain = StatefulChain(forkState(state), seed, forkState, gen) } /** * A chain that repeats the same value */ public class ConstantChain(public val value: T) : Chain { - override suspend fun next(): T = value - - override fun fork(): Chain = this + public override suspend fun next(): T = value + public override fun fork(): Chain = this } /** diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt index 7b26fd221..2b6073e07 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt @@ -24,7 +24,7 @@ public interface SuspendableMathFunction, R> { public suspend operator fun C.invoke(arg: T): R } -public suspend fun SuspendableMathFunction.invoke(arg: Double) = RealField.invoke(arg) +public suspend fun SuspendableMathFunction.invoke(arg: Double): R = RealField.invoke(arg) /** * A parametric function with parameter diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt index 0acef2fb7..530dee4f2 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt @@ -29,7 +29,6 @@ public interface Histogram> : Iterable { * Dimension of the histogram */ public val dimension: Int - } public interface MutableHistogram> : Histogram { diff --git a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt index 24c30bf4c..add01d82c 100644 --- a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt +++ b/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt @@ -44,7 +44,7 @@ public class UnivariateHistogram private constructor(private val factory: (Doubl } private fun createBin(value: Double): UnivariateBin = factory(value).also { - synchronized(this) { bins.put(it.position, it) } + synchronized(this) { bins[it.position] = it } } public override operator fun get(point: Buffer): UnivariateBin? = get(point[0]) @@ -87,7 +87,7 @@ public class UnivariateHistogram private constructor(private val factory: (Doubl ) else -> { - val index = (0 until sorted.size).first { value > sorted[it] } + val index = sorted.indices.first { value > sorted[it] } val left = sorted[index] val right = sorted[index + 1] UnivariateBin((left + right) / 2, (right - left)) diff --git a/kmath-koma/build.gradle.kts b/kmath-koma/build.gradle.kts deleted file mode 100644 index 606113e75..000000000 --- a/kmath-koma/build.gradle.kts +++ /dev/null @@ -1,30 +0,0 @@ -plugins { id("ru.mipt.npm.mpp") } - -repositories.maven("http://dl.bintray.com/kyonifer/maven") - -kotlin.sourceSets { - commonMain { - dependencies { - api(project(":kmath-core")) - api("com.kyonifer:koma-core-api-common:0.12") - } - } - - jvmMain { - dependencies { - api("com.kyonifer:koma-core-api-jvm:0.12") - } - } - - jvmTest { - dependencies { - implementation("com.kyonifer:koma-core-ejml:0.12") - } - } - - jsMain { - dependencies { - api("com.kyonifer:koma-core-api-js:0.12") - } - } -} diff --git a/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt b/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt deleted file mode 100644 index 139b8cc8d..000000000 --- a/kmath-koma/src/commonMain/kotlin/scientifik.kmath.linear/KomaMatrix.kt +++ /dev/null @@ -1,105 +0,0 @@ -package scientifik.kmath.linear - -import koma.extensions.fill -import koma.matrix.MatrixFactory -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.NDStructure - -public class KomaMatrixContext( - private val factory: MatrixFactory>, - private val space: Space -) : MatrixContext { - public override fun produce(rows: Int, columns: Int, initializer: (i: Int, j: Int) -> T): KomaMatrix = - KomaMatrix(factory.zeros(rows, columns).fill(initializer)) - - public fun Matrix.toKoma(): KomaMatrix = if (this is KomaMatrix) - this - else - produce(rowNum, colNum) { i, j -> get(i, j) } - - public fun Point.toKoma(): KomaVector = if (this is KomaVector) - this - else - KomaVector(factory.zeros(size, 1).fill { i, _ -> get(i) }) - - public override fun Matrix.dot(other: Matrix): KomaMatrix = - KomaMatrix(toKoma().origin * other.toKoma().origin) - - public override fun Matrix.dot(vector: Point): KomaVector = - KomaVector(toKoma().origin * vector.toKoma().origin) - - public override operator fun Matrix.unaryMinus(): KomaMatrix = - KomaMatrix(toKoma().origin.unaryMinus()) - - public override fun add(a: Matrix, b: Matrix): KomaMatrix = - KomaMatrix(a.toKoma().origin + b.toKoma().origin) - - public override operator fun Matrix.minus(b: Matrix): KomaMatrix = - KomaMatrix(toKoma().origin - b.toKoma().origin) - - public override fun multiply(a: Matrix, k: Number): Matrix = - produce(a.rowNum, a.colNum) { i, j -> space { a[i, j] * k } } - - public override operator fun Matrix.times(value: T): KomaMatrix = - KomaMatrix(toKoma().origin * value) - - public companion object -} - -public fun KomaMatrixContext.solve(a: Matrix, b: Matrix): KomaMatrix = - KomaMatrix(a.toKoma().origin.solve(b.toKoma().origin)) - -public fun KomaMatrixContext.solve(a: Matrix, b: Point): KomaVector = - KomaVector(a.toKoma().origin.solve(b.toKoma().origin)) - -public fun KomaMatrixContext.inverse(a: Matrix): KomaMatrix = - KomaMatrix(a.toKoma().origin.inv()) - -public class KomaMatrix(public val origin: koma.matrix.Matrix, features: Set? = null) : - FeaturedMatrix { - public override val rowNum: Int get() = origin.numRows() - public override val colNum: Int get() = origin.numCols() - - public override val shape: IntArray get() = intArrayOf(origin.numRows(), origin.numCols()) - - public override val features: Set = features ?: hashSetOf( - object : DeterminantFeature { - override val determinant: T get() = origin.det() - }, - - object : LUPDecompositionFeature { - private val lup by lazy { origin.LU() } - override val l: FeaturedMatrix get() = KomaMatrix(lup.second) - override val u: FeaturedMatrix get() = KomaMatrix(lup.third) - override val p: FeaturedMatrix get() = KomaMatrix(lup.first) - } - ) - - override fun suggestFeature(vararg features: MatrixFeature): FeaturedMatrix = - KomaMatrix(this.origin, this.features + features) - - override operator fun get(i: Int, j: Int): T = origin.getGeneric(i, j) - - override fun equals(other: Any?): Boolean { - return NDStructure.equals(this, other as? NDStructure<*> ?: return false) - } - - override fun hashCode(): Int { - var result = origin.hashCode() - result = 31 * result + features.hashCode() - return result - } -} - -public class KomaVector internal constructor(public val origin: koma.matrix.Matrix) : Point { - override val size: Int get() = origin.numRows() - - init { - require(origin.numCols() == 1) { error("Only single column matrices are allowed") } - } - - override operator fun get(index: Int): T = origin.getGeneric(index) - override operator fun iterator(): Iterator = origin.toIterable().iterator() -} diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt index e1f0e8d6e..3c4d0420f 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt @@ -73,5 +73,5 @@ public fun Sampler.sampleBuffer( /** * Generate a bunch of samples from real distributions */ -public fun Sampler.sampleBuffer(generator: RandomGenerator, size: Int) = +public fun Sampler.sampleBuffer(generator: RandomGenerator, size: Int): Chain> = sampleBuffer(generator, size, Buffer.Companion::real) diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt index ea526c058..05b62deb8 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt @@ -6,42 +6,38 @@ import scientifik.kmath.chains.SimpleChain /** * A multivariate distribution which takes a map of parameters */ -interface NamedDistribution : Distribution> +public interface NamedDistribution : Distribution> /** * A multivariate distribution that has independent distributions for separate axis */ -class FactorizedDistribution(val distributions: Collection>) : NamedDistribution { - - override fun probability(arg: Map): Double { - return distributions.fold(1.0) { acc, distr -> acc * distr.probability(arg) } - } +public class FactorizedDistribution(public val distributions: Collection>) : + NamedDistribution { + override fun probability(arg: Map): Double = + distributions.fold(1.0) { acc, distr -> acc * distr.probability(arg) } override fun sample(generator: RandomGenerator): Chain> { val chains = distributions.map { it.sample(generator) } - return SimpleChain> { - chains.fold(emptyMap()) { acc, chain -> acc + chain.next() } - } + return SimpleChain { chains.fold(emptyMap()) { acc, chain -> acc + chain.next() } } } } -class NamedDistributionWrapper(val name: String, val distribution: Distribution) : NamedDistribution { +public class NamedDistributionWrapper(public val name: String, public val distribution: Distribution) : + NamedDistribution { override fun probability(arg: Map): Double = distribution.probability( arg[name] ?: error("Argument with name $name not found in input parameters") ) override fun sample(generator: RandomGenerator): Chain> { val chain = distribution.sample(generator) - return SimpleChain { - mapOf(name to chain.next()) - } + return SimpleChain { mapOf(name to chain.next()) } } } -class DistributionBuilder{ +public class DistributionBuilder { private val distributions = ArrayList>() - infix fun String.to(distribution: Distribution){ - distributions.add(NamedDistributionWrapper(this,distribution)) + public infix fun String.to(distribution: Distribution) { + distributions.add(NamedDistributionWrapper(this, distribution)) } -} \ No newline at end of file +} diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt index 49163c701..4fc7fe241 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt @@ -5,10 +5,13 @@ import scientifik.kmath.chains.Chain /** * A possibly stateful chain producing random values. */ -class RandomChain(val generator: RandomGenerator, private val gen: suspend RandomGenerator.() -> R) : Chain { +public class RandomChain( + public val generator: RandomGenerator, + private val gen: suspend RandomGenerator.() -> R +) : Chain { override suspend fun next(): R = generator.gen() override fun fork(): Chain = RandomChain(generator.fork(), gen) } -fun RandomGenerator.chain(gen: suspend RandomGenerator.() -> R): RandomChain = RandomChain(this, gen) +public fun RandomGenerator.chain(gen: suspend RandomGenerator.() -> R): RandomChain = RandomChain(this, gen) diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt index 2a225fe47..ecf9beeb1 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt @@ -5,17 +5,15 @@ import kotlin.random.Random /** * A basic generator */ -interface RandomGenerator { - fun nextBoolean(): Boolean - - fun nextDouble(): Double - fun nextInt(): Int - fun nextInt(until: Int): Int - fun nextLong(): Long - fun nextLong(until: Long): Long - - fun fillBytes(array: ByteArray, fromIndex: Int = 0, toIndex: Int = array.size) - fun nextBytes(size: Int): ByteArray = ByteArray(size).also { fillBytes(it) } +public interface RandomGenerator { + public fun nextBoolean(): Boolean + public fun nextDouble(): Double + public fun nextInt(): Int + public fun nextInt(until: Int): Int + public fun nextLong(): Long + public fun nextLong(until: Long): Long + public fun fillBytes(array: ByteArray, fromIndex: Int = 0, toIndex: Int = array.size) + public fun nextBytes(size: Int): ByteArray = ByteArray(size).also { fillBytes(it) } /** * Create a new generator which is independent from current generator (operations on new generator do not affect this one @@ -24,32 +22,27 @@ interface RandomGenerator { * * The thread safety of this operation is not guaranteed since it could affect the state of the generator. */ - fun fork(): RandomGenerator + public fun fork(): RandomGenerator - companion object { - val default by lazy { DefaultGenerator() } + public companion object { + public val default: DefaultGenerator by lazy { DefaultGenerator() } - fun default(seed: Long) = DefaultGenerator(Random(seed)) + public fun default(seed: Long): DefaultGenerator = DefaultGenerator(Random(seed)) } } -inline class DefaultGenerator(val random: Random = Random) : RandomGenerator { - override fun nextBoolean(): Boolean = random.nextBoolean() +public inline class DefaultGenerator(public val random: Random = Random) : RandomGenerator { + public override fun nextBoolean(): Boolean = random.nextBoolean() + public override fun nextDouble(): Double = random.nextDouble() + public override fun nextInt(): Int = random.nextInt() + public override fun nextInt(until: Int): Int = random.nextInt(until) + public override fun nextLong(): Long = random.nextLong() + public override fun nextLong(until: Long): Long = random.nextLong(until) - override fun nextDouble(): Double = random.nextDouble() - - override fun nextInt(): Int = random.nextInt() - override fun nextInt(until: Int): Int = random.nextInt(until) - - override fun nextLong(): Long = random.nextLong() - - override fun nextLong(until: Long): Long = random.nextLong(until) - - override fun fillBytes(array: ByteArray, fromIndex: Int, toIndex: Int) { + public override fun fillBytes(array: ByteArray, fromIndex: Int, toIndex: Int) { random.nextBytes(array, fromIndex, toIndex) } - override fun nextBytes(size: Int): ByteArray = random.nextBytes(size) - - override fun fork(): RandomGenerator = RandomGenerator.default(random.nextLong()) -} \ No newline at end of file + public override fun nextBytes(size: Int): ByteArray = random.nextBytes(size) + public override fun fork(): RandomGenerator = RandomGenerator.default(random.nextLong()) +} diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt index 02f98439e..184665928 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt @@ -7,26 +7,25 @@ import scientifik.kmath.chains.zip import scientifik.kmath.operations.Space import scientifik.kmath.operations.invoke -class BasicSampler(val chainBuilder: (RandomGenerator) -> Chain) : Sampler { - override fun sample(generator: RandomGenerator): Chain = chainBuilder(generator) +public class BasicSampler(public val chainBuilder: (RandomGenerator) -> Chain) : Sampler { + public override fun sample(generator: RandomGenerator): Chain = chainBuilder(generator) } -class ConstantSampler(val value: T) : Sampler { - override fun sample(generator: RandomGenerator): Chain = ConstantChain(value) +public class ConstantSampler(public val value: T) : Sampler { + public override fun sample(generator: RandomGenerator): Chain = ConstantChain(value) } /** * A space for samplers. Allows to perform simple operations on distributions */ -class SamplerSpace(val space: Space) : Space> { +public class SamplerSpace(public val space: Space) : Space> { + public override val zero: Sampler = ConstantSampler(space.zero) - override val zero: Sampler = ConstantSampler(space.zero) - - override fun add(a: Sampler, b: Sampler): Sampler = BasicSampler { generator -> + public override fun add(a: Sampler, b: Sampler): Sampler = BasicSampler { generator -> a.sample(generator).zip(b.sample(generator)) { aValue, bValue -> space { aValue + bValue } } } - override fun multiply(a: Sampler, k: Number): Sampler = BasicSampler { generator -> + public override fun multiply(a: Sampler, k: Number): Sampler = BasicSampler { generator -> a.sample(generator).map { space { it * k.toDouble() } } } } diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt index c82d262bf..7811b88f6 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt @@ -6,7 +6,7 @@ import kotlinx.coroutines.ExperimentalCoroutinesApi import kotlinx.coroutines.FlowPreview import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.map -import kotlinx.coroutines.flow.scanReduce +import kotlinx.coroutines.flow.runningReduce import scientifik.kmath.coroutines.mapParallel import scientifik.kmath.operations.* import scientifik.kmath.structures.Buffer @@ -16,8 +16,8 @@ import scientifik.kmath.structures.asSequence /** * A function, that transforms a buffer of random quantities to some resulting value */ -interface Statistic { - suspend operator fun invoke(data: Buffer): R +public interface Statistic { + public suspend operator fun invoke(data: Buffer): R } /** @@ -26,17 +26,17 @@ interface Statistic { * @param I - intermediate block type * @param R - result type */ -interface ComposableStatistic : Statistic { +public interface ComposableStatistic : Statistic { //compute statistic on a single block - suspend fun computeIntermediate(data: Buffer): I + public suspend fun computeIntermediate(data: Buffer): I //Compose two blocks - suspend fun composeIntermediate(first: I, second: I): I + public suspend fun composeIntermediate(first: I, second: I): I //Transform block to result - suspend fun toResult(intermediate: I): R + public suspend fun toResult(intermediate: I): R - override suspend fun invoke(data: Buffer): R = toResult(computeIntermediate(data)) + public override suspend fun invoke(data: Buffer): R = toResult(computeIntermediate(data)) } @FlowPreview @@ -46,7 +46,7 @@ private fun ComposableStatistic.flowIntermediate( dispatcher: CoroutineDispatcher = Dispatchers.Default ): Flow = flow .mapParallel(dispatcher) { computeIntermediate(it) } - .scanReduce(::composeIntermediate) + .runningReduce(::composeIntermediate) /** @@ -57,7 +57,7 @@ private fun ComposableStatistic.flowIntermediate( */ @FlowPreview @ExperimentalCoroutinesApi -fun ComposableStatistic.flow( +public fun ComposableStatistic.flow( flow: Flow>, dispatcher: CoroutineDispatcher = Dispatchers.Default ): Flow = flowIntermediate(flow, dispatcher).map(::toResult) @@ -65,32 +65,32 @@ fun ComposableStatistic.flow( /** * Arithmetic mean */ -class Mean(val space: Space) : ComposableStatistic, T> { - override suspend fun computeIntermediate(data: Buffer): Pair = +public class Mean(public val space: Space) : ComposableStatistic, T> { + public override suspend fun computeIntermediate(data: Buffer): Pair = space { sum(data.asIterable()) } to data.size - override suspend fun composeIntermediate(first: Pair, second: Pair): Pair = + public override suspend fun composeIntermediate(first: Pair, second: Pair): Pair = space { first.first + second.first } to (first.second + second.second) - override suspend fun toResult(intermediate: Pair): T = + public override suspend fun toResult(intermediate: Pair): T = space { intermediate.first / intermediate.second } - companion object { + public companion object { //TODO replace with optimized version which respects overflow - val real: Mean = Mean(RealField) - val int: Mean = Mean(IntRing) - val long: Mean = Mean(LongRing) + public val real: Mean = Mean(RealField) + public val int: Mean = Mean(IntRing) + public val long: Mean = Mean(LongRing) } } /** * Non-composable median */ -class Median(private val comparator: Comparator) : Statistic { - override suspend fun invoke(data: Buffer): T = +public class Median(private val comparator: Comparator) : Statistic { + public override suspend fun invoke(data: Buffer): T = data.asSequence().sortedWith(comparator).toList()[data.size / 2] //TODO check if this is correct - companion object { - val real: Median = Median(Comparator { a: Double, b: Double -> a.compareTo(b) }) + public companion object { + public val real: Median = Median { a: Double, b: Double -> a.compareTo(b) } } } diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt index 9d96bff59..10445219d 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt +++ b/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt @@ -3,32 +3,20 @@ package scientifik.kmath.prob import scientifik.kmath.chains.Chain import scientifik.kmath.chains.SimpleChain -class UniformDistribution(val range: ClosedFloatingPointRange) : UnivariateDistribution { +public class UniformDistribution(public val range: ClosedFloatingPointRange) : UnivariateDistribution { + private val length: Double = range.endInclusive - range.start - private val length = range.endInclusive - range.start + override fun probability(arg: Double): Double = if (arg in range) 1.0 / length else 0.0 - override fun probability(arg: Double): Double { - return if (arg in range) { - return 1.0 / length - } else { - 0.0 - } - } + override fun sample(generator: RandomGenerator): Chain = + SimpleChain { range.start + generator.nextDouble() * length } - override fun sample(generator: RandomGenerator): Chain { - return SimpleChain { - range.start + generator.nextDouble() * length - } - } - - override fun cumulative(arg: Double): Double { - return when { - arg < range.start -> 0.0 - arg >= range.endInclusive -> 1.0 - else -> (arg - range.start) / length - } + override fun cumulative(arg: Double): Double = when { + arg < range.start -> 0.0 + arg >= range.endInclusive -> 1.0 + else -> (arg - range.start) / length } } -fun Distribution.Companion.uniform(range: ClosedFloatingPointRange): UniformDistribution = - UniformDistribution(range) \ No newline at end of file +public fun Distribution.Companion.uniform(range: ClosedFloatingPointRange): UniformDistribution = + UniformDistribution(range) diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt index b3a37ada1..923317ed2 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt +++ b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt @@ -15,8 +15,8 @@ public abstract class ContinuousSamplerDistribution : Distribution { private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingRealChain() { private val sampler = buildCMSampler(generator) - public override fun nextDouble(): Double = sampler.sample() - public override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) + override fun nextDouble(): Double = sampler.sample() + override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) } protected abstract fun buildCMSampler(generator: RandomGenerator): ContinuousSampler @@ -28,8 +28,8 @@ public abstract class DiscreteSamplerDistribution : Distribution { private inner class ContinuousSamplerChain(val generator: RandomGenerator) : BlockingIntChain() { private val sampler = buildSampler(generator) - public override fun nextInt(): Int = sampler.sample() - public override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) + override fun nextInt(): Int = sampler.sample() + override fun fork(): Chain = ContinuousSamplerChain(generator.fork()) } protected abstract fun buildSampler(generator: RandomGenerator): DiscreteSampler @@ -58,9 +58,7 @@ public fun Distribution.Companion.normal( return normalSampler(method, provider) } - override fun probability(arg: Double): Double { - return exp(-arg.pow(2) / 2) / sqrt(PI * 2) - } + override fun probability(arg: Double): Double = exp(-arg.pow(2) / 2) / sqrt(PI * 2) } public fun Distribution.Companion.normal( diff --git a/settings.gradle.kts b/settings.gradle.kts index 53e3ece3c..2e40b2abc 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -26,14 +26,12 @@ rootProject.name = "kmath" include( ":kmath-memory", ":kmath-core", - ":kmath-functions", +// ":kmath-functions", ":kmath-coroutines", ":kmath-histograms", ":kmath-commons", ":kmath-viktor", - ":kmath-koma", ":kmath-prob", - ":kmath-io", ":kmath-dimensions", ":kmath-for-real", ":kmath-geometry", From 2b15d69f11513045a15a6405ff0148f0a0f2ce0f Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Thu, 10 Sep 2020 15:22:01 +0700 Subject: [PATCH 07/26] Enable functions module and unmark Polynomial inline --- .../scientifik/kmath/functions/Polynomial.kt | 8 +-- .../kmath/prob/RandomSourceGenerator.kt | 55 ++++++++----------- .../kmath/viktor/ViktorNDStructure.kt | 4 +- settings.gradle.kts | 2 +- 4 files changed, 30 insertions(+), 39 deletions(-) diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index 77196a121..6eadf4301 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -8,16 +8,16 @@ import kotlin.contracts.contract import kotlin.math.max import kotlin.math.pow +// TODO make `inline`, when KT-41771 gets fixed /** * Polynomial coefficients without fixation on specific context they are applied to * @param coefficients constant is the leftmost coefficient */ -public inline class Polynomial(public val coefficients: List) { +public /*inline*/ class Polynomial(public val coefficients: List) { public constructor(vararg coefficients: T) : this(coefficients.toList()) } -public fun Polynomial.value(): Double = - coefficients.reduceIndexed { index: Int, acc: Double, d: Double -> acc + d.pow(index) } +public fun Polynomial.value(): Double = coefficients.reduceIndexed { index, acc, d -> acc + d.pow(index) } public fun > Polynomial.value(ring: C, arg: T): T = ring { if (coefficients.isEmpty()) return@ring zero @@ -26,7 +26,7 @@ public fun > Polynomial.value(ring: C, arg: T): T = ring for (index in 1 until coefficients.size) { res += coefficients[index] * powerArg - //recalculating power on each step to avoid power costs on long polynomials + // recalculating power on each step to avoid power costs on long polynomials powerArg *= arg } diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt index f5a73a08b..eda36415a 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt +++ b/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt @@ -3,65 +3,56 @@ package scientifik.kmath.prob import org.apache.commons.rng.UniformRandomProvider import org.apache.commons.rng.simple.RandomSource -class RandomSourceGenerator(val source: RandomSource, seed: Long?) : RandomGenerator { +public class RandomSourceGenerator(public val source: RandomSource, seed: Long?) : RandomGenerator { internal val random: UniformRandomProvider = seed?.let { RandomSource.create(source, seed) } ?: RandomSource.create(source) - override fun nextBoolean(): Boolean = random.nextBoolean() + public override fun nextBoolean(): Boolean = random.nextBoolean() + public override fun nextDouble(): Double = random.nextDouble() + public override fun nextInt(): Int = random.nextInt() + public override fun nextInt(until: Int): Int = random.nextInt(until) + public override fun nextLong(): Long = random.nextLong() + public override fun nextLong(until: Long): Long = random.nextLong(until) - override fun nextDouble(): Double = random.nextDouble() - - override fun nextInt(): Int = random.nextInt() - override fun nextInt(until: Int): Int = random.nextInt(until) - - override fun nextLong(): Long = random.nextLong() - override fun nextLong(until: Long): Long = random.nextLong(until) - - override fun fillBytes(array: ByteArray, fromIndex: Int, toIndex: Int) { + public override fun fillBytes(array: ByteArray, fromIndex: Int, toIndex: Int) { require(toIndex > fromIndex) random.nextBytes(array, fromIndex, toIndex - fromIndex) } - override fun fork(): RandomGenerator = RandomSourceGenerator(source, nextLong()) + public override fun fork(): RandomGenerator = RandomSourceGenerator(source, nextLong()) } -inline class RandomGeneratorProvider(val generator: RandomGenerator) : UniformRandomProvider { - override fun nextBoolean(): Boolean = generator.nextBoolean() +public inline class RandomGeneratorProvider(public val generator: RandomGenerator) : UniformRandomProvider { + public override fun nextBoolean(): Boolean = generator.nextBoolean() + public override fun nextFloat(): Float = generator.nextDouble().toFloat() - override fun nextFloat(): Float = generator.nextDouble().toFloat() - - override fun nextBytes(bytes: ByteArray) { + public override fun nextBytes(bytes: ByteArray) { generator.fillBytes(bytes) } - override fun nextBytes(bytes: ByteArray, start: Int, len: Int) { + public override fun nextBytes(bytes: ByteArray, start: Int, len: Int) { generator.fillBytes(bytes, start, start + len) } - override fun nextInt(): Int = generator.nextInt() - - override fun nextInt(n: Int): Int = generator.nextInt(n) - - override fun nextDouble(): Double = generator.nextDouble() - - override fun nextLong(): Long = generator.nextLong() - - override fun nextLong(n: Long): Long = generator.nextLong(n) + public override fun nextInt(): Int = generator.nextInt() + public override fun nextInt(n: Int): Int = generator.nextInt(n) + public override fun nextDouble(): Double = generator.nextDouble() + public override fun nextLong(): Long = generator.nextLong() + public override fun nextLong(n: Long): Long = generator.nextLong(n) } /** * Represent this [RandomGenerator] as commons-rng [UniformRandomProvider] preserving and mirroring its current state. * Getting new value from one of those changes the state of another. */ -fun RandomGenerator.asUniformRandomProvider(): UniformRandomProvider = if (this is RandomSourceGenerator) { +public fun RandomGenerator.asUniformRandomProvider(): UniformRandomProvider = if (this is RandomSourceGenerator) random -} else { +else RandomGeneratorProvider(this) -} -fun RandomGenerator.Companion.fromSource(source: RandomSource, seed: Long? = null): RandomSourceGenerator = +public fun RandomGenerator.Companion.fromSource(source: RandomSource, seed: Long? = null): RandomSourceGenerator = RandomSourceGenerator(source, seed) -fun RandomGenerator.Companion.mersenneTwister(seed: Long? = null): RandomSourceGenerator = +public fun RandomGenerator.Companion.mersenneTwister(seed: Long? = null): RandomSourceGenerator = fromSource(RandomSource.MT, seed) diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt index 64f2da4c1..cbd5357af 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt +++ b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt @@ -26,10 +26,10 @@ public fun F64Array.asStructure(): ViktorNDStructure = ViktorNDStructure(this) @Suppress("OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public class ViktorNDField(public override val shape: IntArray) : NDField { public override val zero: ViktorNDStructure - get() = F64Array.full(init = 0.0, shape = *shape).asStructure() + get() = F64Array.full(init = 0.0, shape = shape).asStructure() public override val one: ViktorNDStructure - get() = F64Array.full(init = 1.0, shape = *shape).asStructure() + get() = F64Array.full(init = 1.0, shape = shape).asStructure() public val strides: Strides = DefaultStrides(shape) diff --git a/settings.gradle.kts b/settings.gradle.kts index 2e40b2abc..594c727cb 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -26,7 +26,7 @@ rootProject.name = "kmath" include( ":kmath-memory", ":kmath-core", -// ":kmath-functions", + ":kmath-functions", ":kmath-coroutines", ":kmath-histograms", ":kmath-commons", From 8b171ac3a353e0831e18045ccb7732272ac74f11 Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Sat, 12 Sep 2020 09:22:26 +0700 Subject: [PATCH 08/26] Update changelog --- CHANGELOG.md | 2 +- .../scientifik/kmath/operations/BigInt.kt | 24 +++++++++---------- .../scientifik/kmath/functions/Polynomial.kt | 6 ++--- .../scientifik/kmath/viktor/ViktorBuffer.kt | 2 +- 4 files changed, 17 insertions(+), 17 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 3944c673e..cf42a33e9 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -27,7 +27,7 @@ - `power(T, Int)` extension function has preconditions and supports `Field` - Memory objects have more preconditions (overflow checking) - `tg` function is renamed to `tan` (https://github.com/mipt-npm/kmath/pull/114) -- Gradle version: 6.3 -> 6.6 +- Gradle version: 6.3 -> 6.6.1 - Moved probability distributions to commons-rng and to `kmath-prob` ### Fixed diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt index fbb60026e..d54557a1f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt @@ -255,9 +255,9 @@ public class BigInt internal constructor( } private fun addMagnitudes(mag1: Magnitude, mag2: Magnitude): Magnitude { - val resultLength: Int = max(mag1.size, mag2.size) + 1 + val resultLength = max(mag1.size, mag2.size) + 1 val result = Magnitude(resultLength) - var carry: TBase = 0UL + var carry = 0uL for (i in 0 until resultLength - 1) { val res = when { @@ -265,20 +265,22 @@ public class BigInt internal constructor( i >= mag2.size -> mag1[i].toULong() + carry else -> mag1[i].toULong() + mag2[i].toULong() + carry } + result[i] = (res and BASE).toUInt() carry = (res shr BASE_SIZE) } + result[resultLength - 1] = carry.toUInt() return stripLeadingZeros(result) } private fun subtractMagnitudes(mag1: Magnitude, mag2: Magnitude): Magnitude { - val resultLength: Int = mag1.size + val resultLength = mag1.size val result = Magnitude(resultLength) var carry = 0L for (i in 0 until resultLength) { - var res: Long = + var res = if (i < mag2.size) mag1[i].toLong() - mag2[i].toLong() - carry else mag1[i].toLong() - carry @@ -292,9 +294,9 @@ public class BigInt internal constructor( } private fun multiplyMagnitudeByUInt(mag: Magnitude, x: UInt): Magnitude { - val resultLength: Int = mag.size + 1 + val resultLength = mag.size + 1 val result = Magnitude(resultLength) - var carry: ULong = 0UL + var carry = 0uL for (i in mag.indices) { val cur: ULong = carry + mag[i].toULong() * x.toULong() @@ -307,11 +309,11 @@ public class BigInt internal constructor( } private fun multiplyMagnitudes(mag1: Magnitude, mag2: Magnitude): Magnitude { - val resultLength: Int = mag1.size + mag2.size + val resultLength = mag1.size + mag2.size val result = Magnitude(resultLength) for (i in mag1.indices) { - var carry: ULong = 0UL + var carry = 0uL for (j in mag2.indices) { val cur: ULong = result[i + j].toULong() + mag1[i].toULong() * mag2[j].toULong() + carry @@ -338,9 +340,7 @@ public class BigInt internal constructor( return stripLeadingZeros(result) } - } - } private fun stripLeadingZeros(mag: Magnitude): Magnitude { @@ -366,7 +366,8 @@ public fun Int.toBigInt(): BigInt = BigInt(sign.toByte(), uintArrayOf(kotlin.mat * Convert this [Long] to [BigInt] */ public fun Long.toBigInt(): BigInt = BigInt( - sign.toByte(), stripLeadingZeros( + sign.toByte(), + stripLeadingZeros( uintArrayOf( (kotlin.math.abs(this).toULong() and BASE).toUInt(), ((kotlin.math.abs(this).toULong() shr BASE_SIZE) and BASE).toUInt() @@ -384,7 +385,6 @@ public fun UInt.toBigInt(): BigInt = BigInt(1, uintArrayOf(this)) */ public fun ULong.toBigInt(): BigInt = BigInt( 1, - stripLeadingZeros( uintArrayOf( (this and BASE).toUInt(), diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index 6eadf4301..3d97936f9 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -13,9 +13,9 @@ import kotlin.math.pow * Polynomial coefficients without fixation on specific context they are applied to * @param coefficients constant is the leftmost coefficient */ -public /*inline*/ class Polynomial(public val coefficients: List) { - public constructor(vararg coefficients: T) : this(coefficients.toList()) -} +public inline class Polynomial(public val coefficients: List) + +public fun Polynomial(vararg coefficients: T): Polynomial = Polynomial(coefficients.toList()) public fun Polynomial.value(): Double = coefficients.reduceIndexed { index, acc, d -> acc + d.pow(index) } diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt index be5bf5740..97ab9e6d7 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt +++ b/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt @@ -10,7 +10,7 @@ public inline class ViktorBuffer(public val flatArray: F64FlatArray) : MutableBu public override inline fun get(index: Int): Double = flatArray[index] - override inline fun set(index: Int, value: Double) { + public override inline fun set(index: Int, value: Double) { flatArray[index] = value } From 72340705fec950f2eb157025b4e75857c8f454ce Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Sat, 12 Sep 2020 14:59:12 +0300 Subject: [PATCH 09/26] Build refactor --- build.gradle.kts | 12 +++++++++++- .../kotlin/scientifik/kmath/operations/BigIntDemo.kt | 8 ++++++++ kmath-core/build.gradle.kts | 11 ++++++++--- kmath-memory/build.gradle.kts | 5 +++-- settings.gradle.kts | 10 +--------- 5 files changed, 31 insertions(+), 15 deletions(-) create mode 100644 examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt diff --git a/build.gradle.kts b/build.gradle.kts index 8a2ba3617..b1749bb98 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -14,8 +14,18 @@ allprojects { maven("https://dl.bintray.com/hotkeytlt/maven") } - group = "scientifik" + group = "kscience.kmath" version = kmathVersion + + afterEvaluate { + extensions.findByType()?.run { + targets.all { + sourceSets.all { + languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") + } + } + } + } } subprojects { diff --git a/examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt b/examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt new file mode 100644 index 000000000..10b038943 --- /dev/null +++ b/examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt @@ -0,0 +1,8 @@ +package scientifik.kmath.operations + +fun main() { + val res = BigIntField { + number(1) * 2 + } + println("bigint:$res") +} \ No newline at end of file diff --git a/kmath-core/build.gradle.kts b/kmath-core/build.gradle.kts index 7f9922de4..18c0cc771 100644 --- a/kmath-core/build.gradle.kts +++ b/kmath-core/build.gradle.kts @@ -1,6 +1,11 @@ -plugins { id("scientifik.mpp") } +plugins { + id("scientifik.mpp") +} kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-memory")) } } + commonMain { + dependencies { + api(project(":kmath-memory")) + } + } } diff --git a/kmath-memory/build.gradle.kts b/kmath-memory/build.gradle.kts index 44a5ae24d..75b4f174e 100644 --- a/kmath-memory/build.gradle.kts +++ b/kmath-memory/build.gradle.kts @@ -1,2 +1,3 @@ -plugins { id("scientifik.mpp") } -kotlin.sourceSets.all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } +plugins { + id("scientifik.mpp") +} \ No newline at end of file diff --git a/settings.gradle.kts b/settings.gradle.kts index 487e1d87f..6601fd053 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -1,6 +1,6 @@ pluginManagement { - val toolsVersion = "0.5.0" + val toolsVersion = "0.5.2" plugins { id("kotlinx.benchmark") version "0.2.0-dev-8" @@ -20,14 +20,6 @@ pluginManagement { maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlinx") } - - resolutionStrategy { - eachPlugin { - when (requested.id.id) { - "scientifik.mpp", "scientifik.jvm", "scientifik.publish" -> useModule("scientifik:gradle-tools:$toolsVersion") - } - } - } } rootProject.name = "kmath" From ec08bec42f95736ef1862764e324511dae810342 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Mon, 14 Sep 2020 22:34:45 +0300 Subject: [PATCH 10/26] 0.1.4 --- build.gradle.kts | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/build.gradle.kts b/build.gradle.kts index b1749bb98..0ef0453dd 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -2,7 +2,7 @@ plugins { id("scientifik.publish") apply false } -val kmathVersion by extra("0.1.4-dev-8") +val kmathVersion by extra("0.1.4") val bintrayRepo by extra("scientifik") val githubProject by extra("kmath") From 139525e2d4adea90e62e80881ec551ca54e3c6a4 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Mon, 14 Sep 2020 22:48:02 +0300 Subject: [PATCH 11/26] Patch changelog --- CHANGELOG.md | 12 ++++++++++++ build.gradle.kts | 1 + 2 files changed, 13 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 3944c673e..4bcc57810 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,18 @@ # KMath ## [Unreleased] +### Added + +### Changed + +### Deprecated + +### Removed + +### Fixed + +### Security +## [0.1.4] ### Added - Functional Expressions API diff --git a/build.gradle.kts b/build.gradle.kts index 0ef0453dd..b24ecd15b 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -1,5 +1,6 @@ plugins { id("scientifik.publish") apply false + id("org.jetbrains.changelog") version "0.4.0" } val kmathVersion by extra("0.1.4") From 5eaeb82a0f13336d098375ad68b88184f06f859b Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 16:36:48 +0700 Subject: [PATCH 12/26] Make one-liners not one-liners, add newlines at EOFs, optimize imports and Kotlin extension configurations --- build.gradle.kts | 17 ++++++++--------- .../kmath/linear/LinearAlgebraBenchmark.kt | 2 -- .../scientifik/kmath/structures/NDField.kt | 1 - kmath-ast/build.gradle.kts | 6 +++--- .../scientifik/kmath/ast/MstExpression.kt | 1 - .../kmath/asm/internal/codegenUtils.kt | 1 - kmath-commons/build.gradle.kts | 7 ++++--- kmath-core/build.gradle.kts | 8 +++----- .../scientifik/kmath/expressions/Builders.kt | 1 - .../scientifik/kmath/linear/FeaturedMatrix.kt | 1 - .../kotlin/scientifik/kmath/misc/AutoDiff.kt | 1 - .../kotlin/scientifik/kmath/misc/cumulative.kt | 1 - .../scientifik/kmath/operations/BigInt.kt | 1 - .../scientifik/kmath/operations/Complex.kt | 1 - .../scientifik/kmath/structures/Buffers.kt | 1 - .../kmath/structures/ComplexNDField.kt | 1 - .../kmath/structures/FlaggedBuffer.kt | 1 - .../scientifik/kmath/structures/FloatBuffer.kt | 1 - .../scientifik/kmath/structures/IntBuffer.kt | 7 +------ .../scientifik/kmath/structures/LongBuffer.kt | 1 - .../scientifik/kmath/structures/NDStructure.kt | 1 - .../scientifik/kmath/structures/RealBuffer.kt | 1 - .../scientifik/kmath/structures/ShortBuffer.kt | 1 - .../scientifik/kmath/linear/RealLUSolverTest.kt | 2 -- kmath-coroutines/build.gradle.kts | 1 - kmath-dimensions/build.gradle.kts | 6 +++--- kmath-for-real/build.gradle.kts | 13 ++++++++----- .../kotlin/scientifik/kmath/real/realMatrix.kt | 1 - kmath-functions/build.gradle.kts | 13 ++++++++----- .../scientifik/kmath/functions/Polynomial.kt | 1 - .../scientifik/kmath/histogram/Histogram.kt | 3 --- kmath-memory/build.gradle.kts | 2 +- .../scientifik/memory/ByteBufferMemory.kt | 1 - kmath-prob/build.gradle.kts | 2 +- kmath-viktor/build.gradle.kts | 2 +- 35 files changed, 41 insertions(+), 70 deletions(-) diff --git a/build.gradle.kts b/build.gradle.kts index b24ecd15b..96434d01f 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -1,10 +1,12 @@ +import org.jetbrains.kotlin.gradle.dsl.KotlinProjectExtension +import scientifik.ScientifikPublishPlugin + plugins { id("scientifik.publish") apply false id("org.jetbrains.changelog") version "0.4.0" } val kmathVersion by extra("0.1.4") - val bintrayRepo by extra("scientifik") val githubProject by extra("kmath") @@ -19,18 +21,15 @@ allprojects { version = kmathVersion afterEvaluate { - extensions.findByType()?.run { - targets.all { - sourceSets.all { - languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") - } + extensions.findByType()?.run { + sourceSets.all { + languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } } } } subprojects { - if (name.startsWith("kmath")) { - apply(plugin = "scientifik.publish") - } + if (name.startsWith("kmath")) + apply() } \ No newline at end of file diff --git a/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt b/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt index 6cc5411b8..0386ffcbc 100644 --- a/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt +++ b/examples/src/main/kotlin/scientifik/kmath/linear/LinearAlgebraBenchmark.kt @@ -7,11 +7,9 @@ import scientifik.kmath.commons.linear.toCM import scientifik.kmath.operations.RealField import scientifik.kmath.operations.invoke import scientifik.kmath.structures.Matrix -import kotlin.contracts.ExperimentalContracts import kotlin.random.Random import kotlin.system.measureTimeMillis -@ExperimentalContracts fun main() { val random = Random(1224) val dim = 100 diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt b/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt index 1bc0ed7c8..54ffcb67c 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt +++ b/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt @@ -3,7 +3,6 @@ package scientifik.kmath.structures import kotlinx.coroutines.GlobalScope import scientifik.kmath.operations.RealField import scientifik.kmath.operations.invoke -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.system.measureTimeMillis diff --git a/kmath-ast/build.gradle.kts b/kmath-ast/build.gradle.kts index 86b10bdc7..ace121a09 100644 --- a/kmath-ast/build.gradle.kts +++ b/kmath-ast/build.gradle.kts @@ -1,8 +1,8 @@ -plugins { id("scientifik.mpp") } +plugins { + id("scientifik.mpp") +} kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt index 3cee33956..293152cdd 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt @@ -2,7 +2,6 @@ package scientifik.kmath.ast import scientifik.kmath.expressions.* import scientifik.kmath.operations.* -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt index 6f51fe855..021c8ae02 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt @@ -7,7 +7,6 @@ import scientifik.kmath.ast.MST import scientifik.kmath.expressions.Expression import scientifik.kmath.operations.Algebra import java.lang.reflect.Method -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.reflect.KClass diff --git a/kmath-commons/build.gradle.kts b/kmath-commons/build.gradle.kts index 63c832b7c..a77d8ab47 100644 --- a/kmath-commons/build.gradle.kts +++ b/kmath-commons/build.gradle.kts @@ -1,4 +1,7 @@ -plugins { id("scientifik.jvm") } +plugins { + id("scientifik.jvm") +} + description = "Commons math binding for kmath" dependencies { @@ -8,5 +11,3 @@ dependencies { api(project(":kmath-functions")) api("org.apache.commons:commons-math3:3.6.1") } - -kotlin.sourceSets.all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } diff --git a/kmath-core/build.gradle.kts b/kmath-core/build.gradle.kts index 18c0cc771..5a5a8be6d 100644 --- a/kmath-core/build.gradle.kts +++ b/kmath-core/build.gradle.kts @@ -2,10 +2,8 @@ plugins { id("scientifik.mpp") } -kotlin.sourceSets { - commonMain { - dependencies { - api(project(":kmath-memory")) - } +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-memory")) } } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt index 8d0b82a89..8090db75e 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Builders.kt @@ -4,7 +4,6 @@ import scientifik.kmath.operations.ExtendedField import scientifik.kmath.operations.Field import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Space -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt index 9b60bf719..7237739fb 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt @@ -4,7 +4,6 @@ import scientifik.kmath.operations.Ring import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.Structure2D import scientifik.kmath.structures.asBuffer -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.sqrt diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index be222783e..808312877 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -6,7 +6,6 @@ import scientifik.kmath.operations.Field import scientifik.kmath.operations.invoke import scientifik.kmath.operations.sum import scientifik.kmath.structures.asBuffer -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt index e11adc135..6ac03f463 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt @@ -2,7 +2,6 @@ package scientifik.kmath.misc import scientifik.kmath.operations.Space import scientifik.kmath.operations.invoke -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.jvm.JvmName diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt index 0eed7132e..f03275ed9 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt @@ -3,7 +3,6 @@ package scientifik.kmath.operations import scientifik.kmath.operations.BigInt.Companion.BASE import scientifik.kmath.operations.BigInt.Companion.BASE_SIZE import scientifik.kmath.structures.* -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.log2 import kotlin.math.max diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt index dcfd97d1a..49200b5f9 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt @@ -6,7 +6,6 @@ import scientifik.kmath.structures.MutableBuffer import scientifik.memory.MemoryReader import scientifik.memory.MemorySpec import scientifik.memory.MemoryWriter -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.* diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt index 4afaa63ab..1ea8ca3d5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt @@ -2,7 +2,6 @@ package scientifik.kmath.structures import scientifik.kmath.operations.Complex import scientifik.kmath.operations.complex -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.reflect.KClass diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt index 2c6e3a5c7..5364115d4 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt @@ -4,7 +4,6 @@ import scientifik.kmath.operations.Complex import scientifik.kmath.operations.ComplexField import scientifik.kmath.operations.FieldElement import scientifik.kmath.operations.complex -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt index 9c32aa31b..5146c0668 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.experimental.and diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt index 9e974c644..3beb110cf 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt index 95651c547..f88ed7d66 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt @@ -1,7 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.InvocationKind import kotlin.contracts.contract /** @@ -31,10 +29,7 @@ inline class IntBuffer(val array: IntArray) : MutableBuffer { * The function [init] is called for each array element sequentially starting from the first one. * It should return the value for an buffer element given its index. */ -inline fun IntBuffer(size: Int, init: (Int) -> Int): IntBuffer { - contract { callsInPlace(init) } - return IntBuffer(IntArray(size) { init(it) }) -} +inline fun IntBuffer(size: Int, init: (Int) -> Int): IntBuffer = IntBuffer(IntArray(size) { init(it) }) /** * Returns a new [IntBuffer] of given elements. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt index a44109f8a..3a1d679c2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt index f4eb93b9e..01a692a65 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.jvm.JvmName import kotlin.reflect.KClass diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt index cba8e9689..3c92fb0ce 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt index 9aa674177..1feba1e6b 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt @@ -1,6 +1,5 @@ package scientifik.kmath.structures -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract /** diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt b/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt index 34bd8a0e3..9de9fb575 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt +++ b/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt @@ -1,11 +1,9 @@ package scientifik.kmath.linear import scientifik.kmath.structures.Matrix -import kotlin.contracts.ExperimentalContracts import kotlin.test.Test import kotlin.test.assertEquals -@ExperimentalContracts class RealLUSolverTest { @Test diff --git a/kmath-coroutines/build.gradle.kts b/kmath-coroutines/build.gradle.kts index 4469a9ef6..bbbddeba3 100644 --- a/kmath-coroutines/build.gradle.kts +++ b/kmath-coroutines/build.gradle.kts @@ -6,7 +6,6 @@ plugins { kotlin.sourceSets { all { with(languageSettings) { - useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") useExperimentalAnnotation("kotlinx.coroutines.InternalCoroutinesApi") useExperimentalAnnotation("kotlinx.coroutines.ExperimentalCoroutinesApi") useExperimentalAnnotation("kotlinx.coroutines.FlowPreview") diff --git a/kmath-dimensions/build.gradle.kts b/kmath-dimensions/build.gradle.kts index dda6cd2f0..597ce8799 100644 --- a/kmath-dimensions/build.gradle.kts +++ b/kmath-dimensions/build.gradle.kts @@ -11,9 +11,9 @@ kotlin.sourceSets { } } - jvmMain{ - dependencies{ + jvmMain { + dependencies { api(kotlin("reflect")) } } -} \ No newline at end of file +} diff --git a/kmath-for-real/build.gradle.kts b/kmath-for-real/build.gradle.kts index 46d2682f7..675457ac5 100644 --- a/kmath-for-real/build.gradle.kts +++ b/kmath-for-real/build.gradle.kts @@ -1,6 +1,9 @@ -plugins { id("scientifik.mpp") } - -kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) } } +plugins { + id("scientifik.mpp") +} + +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-core")) + } } diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt index 3752fc3ca..b5569cca6 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt +++ b/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt @@ -9,7 +9,6 @@ import scientifik.kmath.structures.Buffer import scientifik.kmath.structures.Matrix import scientifik.kmath.structures.RealBuffer import scientifik.kmath.structures.asIterable -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.contract import kotlin.math.pow diff --git a/kmath-functions/build.gradle.kts b/kmath-functions/build.gradle.kts index 46d2682f7..675457ac5 100644 --- a/kmath-functions/build.gradle.kts +++ b/kmath-functions/build.gradle.kts @@ -1,6 +1,9 @@ -plugins { id("scientifik.mpp") } - -kotlin.sourceSets { - all { languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") } - commonMain { dependencies { api(project(":kmath-core")) } } +plugins { + id("scientifik.mpp") +} + +kotlin.sourceSets.commonMain { + dependencies { + api(project(":kmath-core")) + } } diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt index c4470ad27..fcfa9f1aa 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt @@ -3,7 +3,6 @@ package scientifik.kmath.functions import scientifik.kmath.operations.Ring import scientifik.kmath.operations.Space import scientifik.kmath.operations.invoke -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.math.max diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt index 9ff2aacf5..32b6444cc 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt @@ -4,9 +4,6 @@ import scientifik.kmath.domains.Domain import scientifik.kmath.linear.Point import scientifik.kmath.structures.ArrayBuffer import scientifik.kmath.structures.RealBuffer -import kotlin.contracts.ExperimentalContracts -import kotlin.contracts.InvocationKind -import kotlin.contracts.contract /** * The bin in the histogram. The histogram is by definition always done in the real space diff --git a/kmath-memory/build.gradle.kts b/kmath-memory/build.gradle.kts index 75b4f174e..1f34a4f17 100644 --- a/kmath-memory/build.gradle.kts +++ b/kmath-memory/build.gradle.kts @@ -1,3 +1,3 @@ plugins { id("scientifik.mpp") -} \ No newline at end of file +} diff --git a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt index f4967bf5c..ac8609094 100644 --- a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt +++ b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt @@ -6,7 +6,6 @@ import java.nio.channels.FileChannel import java.nio.file.Files import java.nio.file.Path import java.nio.file.StandardOpenOption -import kotlin.contracts.ExperimentalContracts import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-prob/build.gradle.kts b/kmath-prob/build.gradle.kts index a69d61b73..6cdd301c2 100644 --- a/kmath-prob/build.gradle.kts +++ b/kmath-prob/build.gradle.kts @@ -14,4 +14,4 @@ kotlin.sourceSets { api("org.apache.commons:commons-rng-simple:1.3") } } -} \ No newline at end of file +} diff --git a/kmath-viktor/build.gradle.kts b/kmath-viktor/build.gradle.kts index 52ee7c497..5ad0620e9 100644 --- a/kmath-viktor/build.gradle.kts +++ b/kmath-viktor/build.gradle.kts @@ -7,4 +7,4 @@ description = "Binding for https://github.com/JetBrains-Research/viktor" dependencies { api(project(":kmath-core")) api("org.jetbrains.bio:viktor:1.0.1") -} \ No newline at end of file +} From 4cebca51ef6a3c09a0e921f4a171e7a58bf8c560 Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 19:01:27 +0700 Subject: [PATCH 13/26] Add @author annotations, minor KDoc updates --- .../kotlin/scientifik/kmath/ast/MST.kt | 3 ++ .../kotlin/scientifik/kmath/ast/MstAlgebra.kt | 10 +++++ .../scientifik/kmath/ast/MstExpression.kt | 19 ++++++++ .../kotlin/scientifik/kmath/ast/parser.kt | 4 ++ .../kotlin/scientifik/kmath/asm/asm.kt | 15 +++++-- .../kmath/asm/internal/AsmBuilder.kt | 1 + .../scientifik/kmath/asm/internal/MstType.kt | 3 ++ .../kmath/asm/internal/codegenUtils.kt | 43 +++++++++++++++---- .../kmath/asm/internal/mapIntrinsics.kt | 5 +++ .../kmath/operations/AlgebraExtensions.kt | 5 +++ .../kmath/structures/FloatBuffer.kt | 1 + 11 files changed, 97 insertions(+), 12 deletions(-) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt index 0e8151c04..22b2efcda 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt @@ -6,6 +6,8 @@ import scientifik.kmath.operations.RealField /** * A Mathematical Syntax Tree node for mathematical expressions. + * + * @author Alexander Nozik */ sealed class MST { /** @@ -52,6 +54,7 @@ sealed class MST { * @receiver the algebra that provides operations. * @param node the node to evaluate. * @return the value of expression. + * @author Alexander Nozik */ fun Algebra.evaluate(node: MST): T = when (node) { is MST.Numeric -> (this as? NumericAlgebra)?.number(node.value) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt index 23deae24b..ac8765198 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt @@ -4,6 +4,8 @@ import scientifik.kmath.operations.* /** * [Algebra] over [MST] nodes. + * + * @author Alexander Nozik */ object MstAlgebra : NumericAlgebra { override fun number(value: Number): MST = MST.Numeric(value) @@ -19,6 +21,8 @@ object MstAlgebra : NumericAlgebra { /** * [Space] over [MST] nodes. + * + * @author Alexander Nozik */ object MstSpace : Space, NumericAlgebra { override val zero: MST = number(0.0) @@ -36,6 +40,8 @@ object MstSpace : Space, NumericAlgebra { /** * [Ring] over [MST] nodes. + * + * @author Alexander Nozik */ object MstRing : Ring, NumericAlgebra { override val zero: MST = number(0.0) @@ -57,6 +63,8 @@ object MstRing : Ring, NumericAlgebra { /** * [Field] over [MST] nodes. + * + * @author Alexander Nozik */ object MstField : Field { override val zero: MST = number(0.0) @@ -77,6 +85,8 @@ object MstField : Field { /** * [ExtendedField] over [MST] nodes. + * + * @author Iaroslav Postovalov */ object MstExtendedField : ExtendedField { override val zero: MST = number(0.0) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt index 293152cdd..71779ac96 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt @@ -11,6 +11,7 @@ import kotlin.contracts.contract * * @property algebra the algebra that provides operations. * @property mst the [MST] node. + * @author Alexander Nozik */ class MstExpression(val algebra: Algebra, val mst: MST) : Expression { private inner class InnerAlgebra(val arguments: Map) : NumericAlgebra { @@ -31,6 +32,8 @@ class MstExpression(val algebra: Algebra, val mst: MST) : Expression { /** * Builds [MstExpression] over [Algebra]. + * + * @author Alexander Nozik */ inline fun , E : Algebra> A.mst( mstAlgebra: E, @@ -39,6 +42,8 @@ inline fun , E : Algebra> A.mst( /** * Builds [MstExpression] over [Space]. + * + * @author Alexander Nozik */ inline fun Space.mstInSpace(block: MstSpace.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -47,6 +52,8 @@ inline fun Space.mstInSpace(block: MstSpace.() -> MST): Mst /** * Builds [MstExpression] over [Ring]. + * + * @author Alexander Nozik */ inline fun Ring.mstInRing(block: MstRing.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -55,6 +62,8 @@ inline fun Ring.mstInRing(block: MstRing.() -> MST): MstExp /** * Builds [MstExpression] over [Field]. + * + * @author Alexander Nozik */ inline fun Field.mstInField(block: MstField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -63,6 +72,8 @@ inline fun Field.mstInField(block: MstField.() -> MST): Mst /** * Builds [MstExpression] over [ExtendedField]. + * + * @author Iaroslav Postovalov */ inline fun Field.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -71,6 +82,8 @@ inline fun Field.mstInExtendedField(block: MstExtendedField /** * Builds [MstExpression] over [FunctionalExpressionSpace]. + * + * @author Alexander Nozik */ inline fun > FunctionalExpressionSpace.mstInSpace(block: MstSpace.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -79,6 +92,8 @@ inline fun > FunctionalExpressionSpace.mstIn /** * Builds [MstExpression] over [FunctionalExpressionRing]. + * + * @author Alexander Nozik */ inline fun > FunctionalExpressionRing.mstInRing(block: MstRing.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -87,6 +102,8 @@ inline fun > FunctionalExpressionRing.mstInRi /** * Builds [MstExpression] over [FunctionalExpressionField]. + * + * @author Alexander Nozik */ inline fun > FunctionalExpressionField.mstInField(block: MstField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -95,6 +112,8 @@ inline fun > FunctionalExpressionField.mstIn /** * Builds [MstExpression] over [FunctionalExpressionExtendedField]. + * + * @author Iaroslav Postovalov */ inline fun > FunctionalExpressionExtendedField.mstInExtendedField(block: MstExtendedField.() -> MST): MstExpression { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt index cba335a8d..d83b12486 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt @@ -17,6 +17,8 @@ import scientifik.kmath.operations.SpaceOperations /** * TODO move to core + * + * @author Alexander Nozik and Iaroslav Postovalov */ object ArithmeticsEvaluator : Grammar() { // TODO replace with "...".toRegex() when better-parse 0.4.1 is released @@ -85,6 +87,7 @@ object ArithmeticsEvaluator : Grammar() { * * @receiver the string to parse. * @return the [MST] node. + * @author Alexander Nozik */ fun String.tryParseMath(): ParseResult = ArithmeticsEvaluator.tryParseToEnd(this) @@ -93,5 +96,6 @@ fun String.tryParseMath(): ParseResult = ArithmeticsEvaluator.tryParseToEnd * * @receiver the string to parse. * @return the [MST] node. + * @author Alexander Nozik */ fun String.parseMath(): MST = ArithmeticsEvaluator.parseToEnd(this) diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt index ee0ea15ff..a5da51564 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt @@ -11,7 +11,12 @@ import scientifik.kmath.operations.Algebra import kotlin.reflect.KClass /** - * Compile given MST to an Expression using AST compiler + * Compiles given MST to an Expression using AST compiler. + * + * @param type the target type. + * @param algebra the target algebra. + * @return the compiled expression. + * @author Alexander Nozik */ fun MST.compileWith(type: KClass, algebra: Algebra): Expression { fun AsmBuilder.visit(node: MST) { @@ -54,11 +59,15 @@ fun MST.compileWith(type: KClass, algebra: Algebra): Expression< } /** - * Compile an [MST] to ASM using given algebra + * Compiles an [MST] to ASM using given algebra. + * + * @author Alexander Nozik. */ inline fun Algebra.expression(mst: MST): Expression = mst.compileWith(T::class, this) /** - * Optimize performance of an [MstExpression] using ASM codegen + * Optimizes performance of an [MstExpression] using ASM codegen. + * + * @author Alexander Nozik. */ inline fun MstExpression.compile(): Expression = mst.compileWith(T::class, algebra) diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt index f8c159baf..1cf49a251 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt @@ -20,6 +20,7 @@ import kotlin.reflect.KClass * @property algebra the algebra the applied AsmExpressions use. * @property className the unique class name of new loaded class. * @property invokeLabel0Visitor the function to apply to this object when generating invoke method, label 0. + * @author Iaroslav Postovalov */ internal class AsmBuilder internal constructor( private val classOfT: KClass<*>, diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt index bf73d304b..81e6791c1 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt @@ -2,6 +2,9 @@ package scientifik.kmath.asm.internal import scientifik.kmath.ast.MST +/** + * Represents types known in [MST], numbers and general values. + */ internal enum class MstType { GENERAL, NUMBER; diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt index 021c8ae02..ab29d3614 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt @@ -6,6 +6,9 @@ import org.objectweb.asm.commons.InstructionAdapter import scientifik.kmath.ast.MST import scientifik.kmath.expressions.Expression import scientifik.kmath.operations.Algebra +import scientifik.kmath.operations.FieldOperations +import scientifik.kmath.operations.RingOperations +import scientifik.kmath.operations.SpaceOperations import java.lang.reflect.Method import kotlin.contracts.InvocationKind import kotlin.contracts.contract @@ -13,20 +16,27 @@ import kotlin.reflect.KClass private val methodNameAdapters: Map, String> by lazy { hashMapOf( - "+" to 2 to "add", - "*" to 2 to "multiply", - "/" to 2 to "divide", - "+" to 1 to "unaryPlus", - "-" to 1 to "unaryMinus", - "-" to 2 to "minus" + SpaceOperations.PLUS_OPERATION to 2 to "add", + RingOperations.TIMES_OPERATION to 2 to "multiply", + FieldOperations.DIV_OPERATION to 2 to "divide", + SpaceOperations.PLUS_OPERATION to 1 to "unaryPlus", + SpaceOperations.MINUS_OPERATION to 1 to "unaryMinus", + SpaceOperations.MINUS_OPERATION to 2 to "minus" ) } +/** + * Returns ASM [Type] for given [KClass]. + * + * @author Iaroslav Postovalov + */ internal val KClass<*>.asm: Type get() = Type.getType(java) /** * Returns singleton array with this value if the [predicate] is true, returns empty array otherwise. + * + * @author Iaroslav Postovalov */ internal inline fun T.wrapToArrayIf(predicate: (T) -> Boolean): Array { contract { callsInPlace(predicate, InvocationKind.EXACTLY_ONCE) } @@ -35,11 +45,15 @@ internal inline fun T.wrapToArrayIf(predicate: (T) -> Boolean): Arra /** * Creates an [InstructionAdapter] from this [MethodVisitor]. + * + * @author Iaroslav Postovalov */ private fun MethodVisitor.instructionAdapter(): InstructionAdapter = InstructionAdapter(this) /** * Creates an [InstructionAdapter] from this [MethodVisitor] and applies [block] to it. + * + * @author Iaroslav Postovalov */ internal inline fun MethodVisitor.instructionAdapter(block: InstructionAdapter.() -> Unit): InstructionAdapter { contract { callsInPlace(block, InvocationKind.EXACTLY_ONCE) } @@ -48,6 +62,8 @@ internal inline fun MethodVisitor.instructionAdapter(block: InstructionAdapter.( /** * Constructs a [Label], then applies it to this visitor. + * + * @author Iaroslav Postovalov */ internal fun MethodVisitor.label(): Label = Label().also { visitLabel(it) } @@ -56,6 +72,8 @@ internal fun MethodVisitor.label(): Label = Label().also { visitLabel(it) } * * This methods helps to avoid collisions of class name to prevent loading several classes with the same name. If there * is a colliding class, change [collision] parameter or leave it `0` to check existing classes recursively. + * + * @author Iaroslav Postovalov */ internal tailrec fun buildName(mst: MST, collision: Int = 0): String { val name = "scientifik.kmath.asm.generated.AsmCompiledExpression_${mst.hashCode()}_$collision" @@ -75,6 +93,11 @@ internal inline fun ClassWriter(flags: Int, block: ClassWriter.() -> Unit): Clas return ClassWriter(flags).apply(block) } +/** + * Invokes [visitField] and applies [block] to the [FieldVisitor]. + * + * @author Iaroslav Postovalov + */ internal inline fun ClassWriter.visitField( access: Int, name: String, @@ -104,7 +127,7 @@ private fun AsmBuilder.findSpecific(context: Algebra, name: String, pa * Checks if the target [context] for code generation contains a method with needed [name] and arity, also builds * type expectation stack for needed arity. * - * @return `true` if contains, else `false`. + * @author Iaroslav Postovalov */ private fun AsmBuilder.buildExpectationStack( context: Algebra, @@ -136,7 +159,7 @@ private fun AsmBuilder.mapTypes(method: Method, parameterTypes: Array AsmBuilder.tryInvokeSpecific( context: Algebra, @@ -160,7 +183,9 @@ private fun AsmBuilder.tryInvokeSpecific( } /** - * Builds specialized algebra call with option to fallback to generic algebra operation accepting String. + * Builds specialized [context] call with option to fallback to generic algebra operation accepting [String]. + * + * @author Iaroslav Postovalov */ internal inline fun AsmBuilder.buildAlgebraOperationCall( context: Algebra, diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt index 80e83c1bf..997dbbfe5 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt @@ -2,6 +2,11 @@ package scientifik.kmath.asm.internal +/** + * Gets value with given [key] or throws [IllegalStateException] whenever it is not present. + * + * @author Iaroslav Postovalov + */ @JvmOverloads internal fun Map.getOrFail(key: K, default: V? = null): V = this[key] ?: default ?: error("Parameter not found: $key") diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt index 00b16dc98..fabfbdb49 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt @@ -24,6 +24,7 @@ fun Space.sum(data: Sequence): T = data.fold(zero) { left, right -> ad * @receiver the algebra that provides addition and division. * @param data the iterable to find average. * @return the average value. + * @author Iaroslav Postovalov */ fun Space.average(data: Iterable): T = sum(data) / data.count() @@ -33,6 +34,7 @@ fun Space.average(data: Iterable): T = sum(data) / data.count() * @receiver the algebra that provides addition and division. * @param data the sequence to find average. * @return the average value. + * @author Iaroslav Postovalov */ fun Space.average(data: Sequence): T = sum(data) / data.count() @@ -60,6 +62,7 @@ fun Sequence.sumWith(space: Space): T = space.sum(this) * @receiver the iterable to find average. * @param space the algebra that provides addition and division. * @return the average value. + * @author Iaroslav Postovalov */ fun Iterable.averageWith(space: Space): T = space.average(this) @@ -69,6 +72,7 @@ fun Iterable.averageWith(space: Space): T = space.average(this) * @receiver the sequence to find average. * @param space the algebra that provides addition and division. * @return the average value. + * @author Iaroslav Postovalov */ fun Sequence.averageWith(space: Space): T = space.average(this) @@ -98,6 +102,7 @@ fun Ring.power(arg: T, power: Int): T { * @param arg the base. * @param power the exponent. * @return the base raised to the power. + * @author Iaroslav Postovalov */ fun Field.power(arg: T, power: Int): T { require(power != 0 || arg != zero) { "The $zero raised to $power is not defined." } diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt index 3beb110cf..d1b99685c 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt @@ -6,6 +6,7 @@ import kotlin.contracts.contract * Specialized [MutableBuffer] implementation over [FloatArray]. * * @property array the underlying array. + * @author Iaroslav Postovalov */ inline class FloatBuffer(val array: FloatArray) : MutableBuffer { override val size: Int get() = array.size From f815e97873824540abf6c23223bcf21f313279c5 Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 19:06:01 +0700 Subject: [PATCH 14/26] Update AutoDiff.kt to match new trigonometric functions --- .../kotlin/scientifik/kmath/misc/AutoDiff.kt | 52 ++++++++++++++----- 1 file changed, 39 insertions(+), 13 deletions(-) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index 808312877..3ff5fb557 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -65,7 +65,6 @@ inline fun > F.deriv(body: AutoDiffField.() -> Varia } } - abstract class AutoDiffField> : Field> { abstract val context: F @@ -152,7 +151,6 @@ internal class AutoDiffContext>(override val context: F) : // Basic math (+, -, *, /) - override fun add(a: Variable, b: Variable): Variable = derive(variable { a.value + b.value }) { z -> a.d += z.d b.d += z.d @@ -173,38 +171,66 @@ internal class AutoDiffContext>(override val context: F) : } } -// Extensions for differentiation of various basic mathematical functions - -// x ^ 2 fun > AutoDiffField.sqr(x: Variable): Variable = derive(variable { x.value * x.value }) { z -> x.d += z.d * 2 * x.value } -// x ^ 1/2 fun > AutoDiffField.sqrt(x: Variable): Variable = derive(variable { sqrt(x.value) }) { z -> x.d += z.d * 0.5 / z.value } -// x ^ y (const) fun > AutoDiffField.pow(x: Variable, y: Double): Variable = derive(variable { power(x.value, y) }) { z -> x.d += z.d * y * power(x.value, y - 1) } -fun > AutoDiffField.pow(x: Variable, y: Int): Variable = pow(x, y.toDouble()) +fun > AutoDiffField.pow(x: Variable, y: Int): Variable = + pow(x, y.toDouble()) -// exp(x) fun > AutoDiffField.exp(x: Variable): Variable = derive(variable { exp(x.value) }) { z -> x.d += z.d * z.value } -// ln(x) fun > AutoDiffField.ln(x: Variable): Variable = derive(variable { ln(x.value) }) { z -> x.d += z.d / x.value } -// x ^ y (any) fun > AutoDiffField.pow(x: Variable, y: Variable): Variable = exp(y * ln(x)) -// sin(x) fun > AutoDiffField.sin(x: Variable): Variable = derive(variable { sin(x.value) }) { z -> x.d += z.d * cos(x.value) } -// cos(x) fun > AutoDiffField.cos(x: Variable): Variable = derive(variable { cos(x.value) }) { z -> x.d -= z.d * sin(x.value) } + +fun > AutoDiffField.tan(x: Variable): Variable = + derive(variable { tan(x.value) }) { z -> + val c = cos(x.value) + x.d += z.d / (c * c) + } + +fun > AutoDiffField.asin(x: Variable): Variable = + derive(variable { asin(x.value) }) { z -> x.d += z.d / sqrt(one - x.value * x.value) } + +fun > AutoDiffField.acos(x: Variable): Variable = + derive(variable { acos(x.value) }) { z -> x.d -= z.d / sqrt(one - x.value * x.value) } + +fun > AutoDiffField.atan(x: Variable): Variable = + derive(variable { atan(x.value) }) { z -> x.d += z.d / (one + x.value * x.value) } + +fun > AutoDiffField.sinh(x: Variable): Variable = + derive(variable { sin(x.value) }) { z -> x.d += z.d * cosh(x.value) } + +fun > AutoDiffField.cosh(x: Variable): Variable = + derive(variable { cos(x.value) }) { z -> x.d -= z.d * sinh(x.value) } + +fun > AutoDiffField.tanh(x: Variable): Variable = + derive(variable { tan(x.value) }) { z -> + val c = cosh(x.value) + x.d += z.d / (c * c) + } + +fun > AutoDiffField.asinh(x: Variable): Variable = + derive(variable { asin(x.value) }) { z -> x.d += z.d / sqrt(one + x.value * x.value) } + +fun > AutoDiffField.acosh(x: Variable): Variable = + derive(variable { acos(x.value) }) { z -> x.d += z.d / (sqrt((x.value - one) * (x.value + one))) } + +fun > AutoDiffField.atanh(x: Variable): Variable = + derive(variable { atan(x.value) }) { z -> x.d += z.d / (one - x.value * x.value) } + From b89a05347cd4d06a4e1aa6f035a39b2c368e2b98 Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 19:26:44 +0700 Subject: [PATCH 15/26] Hotfix some problems with MstAlgebra.kt --- .../kotlin/scientifik/kmath/ast/MstAlgebra.kt | 26 +++++++++++++++---- 1 file changed, 21 insertions(+), 5 deletions(-) diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt index 23deae24b..29b76f7ca 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt +++ b/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt @@ -38,7 +38,9 @@ object MstSpace : Space, NumericAlgebra { * [Ring] over [MST] nodes. */ object MstRing : Ring, NumericAlgebra { - override val zero: MST = number(0.0) + override val zero: MST + get() = MstSpace.zero + override val one: MST = number(1.0) override fun number(value: Number): MST = MstSpace.number(value) @@ -59,8 +61,11 @@ object MstRing : Ring, NumericAlgebra { * [Field] over [MST] nodes. */ object MstField : Field { - override val zero: MST = number(0.0) - override val one: MST = number(1.0) + override val zero: MST + get() = MstRing.zero + + override val one: MST + get() = MstRing.one override fun symbol(value: String): MST = MstRing.symbol(value) override fun number(value: Number): MST = MstRing.number(value) @@ -79,14 +84,25 @@ object MstField : Field { * [ExtendedField] over [MST] nodes. */ object MstExtendedField : ExtendedField { - override val zero: MST = number(0.0) - override val one: MST = number(1.0) + override val zero: MST + get() = MstField.zero + override val one: MST + get() = MstField.one + + override fun symbol(value: String): MST = MstField.symbol(value) override fun sin(arg: MST): MST = unaryOperation(TrigonometricOperations.SIN_OPERATION, arg) override fun cos(arg: MST): MST = unaryOperation(TrigonometricOperations.COS_OPERATION, arg) + override fun tan(arg: MST): MST = unaryOperation(TrigonometricOperations.TAN_OPERATION, arg) override fun asin(arg: MST): MST = unaryOperation(TrigonometricOperations.ASIN_OPERATION, arg) override fun acos(arg: MST): MST = unaryOperation(TrigonometricOperations.ACOS_OPERATION, arg) override fun atan(arg: MST): MST = unaryOperation(TrigonometricOperations.ATAN_OPERATION, arg) + override fun sinh(arg: MST): MST = unaryOperation(HyperbolicOperations.SINH_OPERATION, arg) + override fun cosh(arg: MST): MST = unaryOperation(HyperbolicOperations.COSH_OPERATION, arg) + override fun tanh(arg: MST): MST = unaryOperation(HyperbolicOperations.TANH_OPERATION, arg) + override fun asinh(arg: MST): MST = unaryOperation(HyperbolicOperations.ASINH_OPERATION, arg) + override fun acosh(arg: MST): MST = unaryOperation(HyperbolicOperations.ACOSH_OPERATION, arg) + override fun atanh(arg: MST): MST = unaryOperation(HyperbolicOperations.ATANH_OPERATION, arg) override fun add(a: MST, b: MST): MST = MstField.add(a, b) override fun multiply(a: MST, k: Number): MST = MstField.multiply(a, k) override fun multiply(a: MST, b: MST): MST = MstField.multiply(a, b) From 1b426d79b42b9d2e2a78021400b519a0cb281710 Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 19:31:17 +0700 Subject: [PATCH 16/26] Fix sign in (d/dx)*cosh(x)=sinh(x) --- .../src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index 3ff5fb557..8bc3f2936 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -217,7 +217,7 @@ fun > AutoDiffField.sinh(x: Variable): Va derive(variable { sin(x.value) }) { z -> x.d += z.d * cosh(x.value) } fun > AutoDiffField.cosh(x: Variable): Variable = - derive(variable { cos(x.value) }) { z -> x.d -= z.d * sinh(x.value) } + derive(variable { cos(x.value) }) { z -> x.d += z.d * sinh(x.value) } fun > AutoDiffField.tanh(x: Variable): Variable = derive(variable { tan(x.value) }) { z -> From a03c650f65019ce4ba7148540d1d8b6e51396d2a Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 20:59:21 +0700 Subject: [PATCH 17/26] Add tests and update changelog --- CHANGELOG.md | 4 +- .../kotlin/scientifik/kmath/misc/AutoDiff.kt | 6 +- .../scientifik/kmath/misc/AutoDiffTest.kt | 138 ++++++++++++++---- 3 files changed, 114 insertions(+), 34 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 4bcc57810..ef675b692 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,7 +2,7 @@ ## [Unreleased] ### Added - +- Better trigonometric and hyperbolic functions for `AutoDiffField` (https://github.com/mipt-npm/kmath/pull/140). ### Changed ### Deprecated @@ -10,7 +10,7 @@ ### Removed ### Fixed - +- `symbol` method in `MstExtendedField` (https://github.com/mipt-npm/kmath/pull/140) ### Security ## [0.1.4] diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index 8bc3f2936..d701dbfc8 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -226,11 +226,11 @@ fun > AutoDiffField.tanh(x: Variable): Va } fun > AutoDiffField.asinh(x: Variable): Variable = - derive(variable { asin(x.value) }) { z -> x.d += z.d / sqrt(one + x.value * x.value) } + derive(variable { asinh(x.value) }) { z -> x.d += z.d / sqrt(one + x.value * x.value) } fun > AutoDiffField.acosh(x: Variable): Variable = - derive(variable { acos(x.value) }) { z -> x.d += z.d / (sqrt((x.value - one) * (x.value + one))) } + derive(variable { acosh(x.value) }) { z -> x.d += z.d / (sqrt((x.value - one) * (x.value + one))) } fun > AutoDiffField.atanh(x: Variable): Variable = - derive(variable { atan(x.value) }) { z -> x.d += z.d / (one - x.value * x.value) } + derive(variable { atanh(x.value) }) { z -> x.d += z.d / (one - x.value * x.value) } diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt b/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt index c08a63ccb..aba6c06ca 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt +++ b/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt @@ -3,19 +3,19 @@ package scientifik.kmath.misc import scientifik.kmath.operations.RealField import scientifik.kmath.structures.asBuffer import kotlin.math.PI +import kotlin.math.pow +import kotlin.math.sqrt import kotlin.test.Test import kotlin.test.assertEquals import kotlin.test.assertTrue class AutoDiffTest { - fun Variable(int: Int): Variable = Variable(int.toDouble()) - - fun deriv(body: AutoDiffField.() -> Variable): DerivationResult = + inline fun deriv(body: AutoDiffField.() -> Variable): DerivationResult = RealField.deriv(body) @Test fun testPlusX2() { - val x = Variable(3) // diff w.r.t this x at 3 + val x = Variable(3.0) // diff w.r.t this x at 3 val y = deriv { x + x } assertEquals(6.0, y.value) // y = x + x = 6 assertEquals(2.0, y.deriv(x)) // dy/dx = 2 @@ -24,8 +24,8 @@ class AutoDiffTest { @Test fun testPlus() { // two variables - val x = Variable(2) - val y = Variable(3) + val x = Variable(2.0) + val y = Variable(3.0) val z = deriv { x + y } assertEquals(5.0, z.value) // z = x + y = 5 assertEquals(1.0, z.deriv(x)) // dz/dx = 1 @@ -35,8 +35,8 @@ class AutoDiffTest { @Test fun testMinus() { // two variables - val x = Variable(7) - val y = Variable(3) + val x = Variable(7.0) + val y = Variable(3.0) val z = deriv { x - y } assertEquals(4.0, z.value) // z = x - y = 4 assertEquals(1.0, z.deriv(x)) // dz/dx = 1 @@ -45,7 +45,7 @@ class AutoDiffTest { @Test fun testMulX2() { - val x = Variable(3) // diff w.r.t this x at 3 + val x = Variable(3.0) // diff w.r.t this x at 3 val y = deriv { x * x } assertEquals(9.0, y.value) // y = x * x = 9 assertEquals(6.0, y.deriv(x)) // dy/dx = 2 * x = 7 @@ -53,7 +53,7 @@ class AutoDiffTest { @Test fun testSqr() { - val x = Variable(3) + val x = Variable(3.0) val y = deriv { sqr(x) } assertEquals(9.0, y.value) // y = x ^ 2 = 9 assertEquals(6.0, y.deriv(x)) // dy/dx = 2 * x = 7 @@ -61,7 +61,7 @@ class AutoDiffTest { @Test fun testSqrSqr() { - val x = Variable(2) + val x = Variable(2.0) val y = deriv { sqr(sqr(x)) } assertEquals(16.0, y.value) // y = x ^ 4 = 16 assertEquals(32.0, y.deriv(x)) // dy/dx = 4 * x^3 = 32 @@ -69,7 +69,7 @@ class AutoDiffTest { @Test fun testX3() { - val x = Variable(2) // diff w.r.t this x at 2 + val x = Variable(2.0) // diff w.r.t this x at 2 val y = deriv { x * x * x } assertEquals(8.0, y.value) // y = x * x * x = 8 assertEquals(12.0, y.deriv(x)) // dy/dx = 3 * x * x = 12 @@ -77,8 +77,8 @@ class AutoDiffTest { @Test fun testDiv() { - val x = Variable(5) - val y = Variable(2) + val x = Variable(5.0) + val y = Variable(2.0) val z = deriv { x / y } assertEquals(2.5, z.value) // z = x / y = 2.5 assertEquals(0.5, z.deriv(x)) // dz/dx = 1 / y = 0.5 @@ -87,7 +87,7 @@ class AutoDiffTest { @Test fun testPow3() { - val x = Variable(2) // diff w.r.t this x at 2 + val x = Variable(2.0) // diff w.r.t this x at 2 val y = deriv { pow(x, 3) } assertEquals(8.0, y.value) // y = x ^ 3 = 8 assertEquals(12.0, y.deriv(x)) // dy/dx = 3 * x ^ 2 = 12 @@ -95,8 +95,8 @@ class AutoDiffTest { @Test fun testPowFull() { - val x = Variable(2) - val y = Variable(3) + val x = Variable(2.0) + val y = Variable(3.0) val z = deriv { pow(x, y) } assertApprox(8.0, z.value) // z = x ^ y = 8 assertApprox(12.0, z.deriv(x)) // dz/dx = y * x ^ (y - 1) = 12 @@ -105,7 +105,7 @@ class AutoDiffTest { @Test fun testFromPaper() { - val x = Variable(3) + val x = Variable(3.0) val y = deriv { 2 * x + x * x * x } assertEquals(33.0, y.value) // y = 2 * x + x * x * x = 33 assertEquals(29.0, y.deriv(x)) // dy/dx = 2 + 3 * x * x = 29 @@ -113,9 +113,9 @@ class AutoDiffTest { @Test fun testInnerVariable() { - val x = Variable(1) + val x = Variable(1.0) val y = deriv { - Variable(1) * x + Variable(1.0) * x } assertEquals(1.0, y.value) // y = x ^ n = 1 assertEquals(1.0, y.deriv(x)) // dy/dx = n * x ^ (n - 1) = n - 1 @@ -124,9 +124,9 @@ class AutoDiffTest { @Test fun testLongChain() { val n = 10_000 - val x = Variable(1) + val x = Variable(1.0) val y = deriv { - var res = Variable(1) + var res = Variable(1.0) for (i in 1..n) res *= x res } @@ -136,7 +136,7 @@ class AutoDiffTest { @Test fun testExample() { - val x = Variable(2) + val x = Variable(2.0) val y = deriv { sqr(x) + 5 * x + 3 } assertEquals(17.0, y.value) // the value of result (y) assertEquals(9.0, y.deriv(x)) // dy/dx @@ -144,7 +144,7 @@ class AutoDiffTest { @Test fun testSqrt() { - val x = Variable(16) + val x = Variable(16.0) val y = deriv { sqrt(x) } assertEquals(4.0, y.value) // y = x ^ 1/2 = 4 assertEquals(1.0 / 8, y.deriv(x)) // dy/dx = 1/2 / x ^ 1/4 = 1/8 @@ -152,18 +152,98 @@ class AutoDiffTest { @Test fun testSin() { - val x = Variable(PI / 6) + val x = Variable(PI / 6.0) val y = deriv { sin(x) } - assertApprox(0.5, y.value) // y = sin(PI/6) = 0.5 - assertApprox(kotlin.math.sqrt(3.0) / 2, y.deriv(x)) // dy/dx = cos(PI/6) = sqrt(3)/2 + assertApprox(0.5, y.value) // y = sin(PI/6) = 0.5 + assertApprox(sqrt(3.0) / 2, y.deriv(x)) // dy/dx = cos(pi/6) = sqrt(3)/2 } @Test fun testCos() { val x = Variable(PI / 6) val y = deriv { cos(x) } - assertApprox(kotlin.math.sqrt(3.0) / 2, y.value) // y = cos(PI/6) = sqrt(3)/2 - assertApprox(-0.5, y.deriv(x)) // dy/dx = -sin(PI/6) = -0.5 + assertApprox(sqrt(3.0) / 2, y.value) //y = cos(pi/6) = sqrt(3)/2 + assertApprox(-0.5, y.deriv(x)) // dy/dx = -sin(pi/6) = -0.5 + } + + @Test + fun testTan() { + val x = Variable(PI / 6) + val y = deriv { tan(x) } + assertApprox(1.0 / sqrt(3.0), y.value) // y = tan(pi/6) = 1/sqrt(3) + assertApprox(4.0 / 3.0, y.deriv(x)) // dy/dx = sec(pi/6)^2 = 4/3 + } + + @Test + fun testAsin() { + val x = Variable(PI / 6) + val y = deriv { asin(x) } + assertApprox(kotlin.math.asin(PI / 6.0), y.value) // y = asin(pi/6) + assertApprox(6.0 / sqrt(36 - PI * PI), y.deriv(x)) // dy/dx = 6/sqrt(36-pi^2) + } + + @Test + fun testAcos() { + val x = Variable(PI / 6) + val y = deriv { acos(x) } + assertApprox(kotlin.math.acos(PI / 6.0), y.value) // y = acos(pi/6) + assertApprox(-6.0 / sqrt(36.0 - PI * PI), y.deriv(x)) // dy/dx = -6/sqrt(36-pi^2) + } + + @Test + fun testAtan() { + val x = Variable(PI / 6) + val y = deriv { atan(x) } + assertApprox(kotlin.math.atan(PI / 6.0), y.value) // y = atan(pi/6) + assertApprox(36.0 / (36.0 + PI * PI), y.deriv(x)) // dy/dx = 36/(36+pi^2) + } + + @Test + fun testSinh() { + val x = Variable(0.0) + val y = deriv { sinh(x) } + assertApprox(kotlin.math.sinh(0.0), y.value) // y = sinh(pi/6) + assertApprox(kotlin.math.cosh(0.0), y.deriv(x)) // dy/dx = cosh(pi/6) + } + + @Test + fun testCosh() { + val x = Variable(0.0) + val y = deriv { cosh(x) } + assertApprox(1.0, y.value) //y = cosh(pi/6) + assertApprox(0.0, y.deriv(x)) // dy/dx = sinh(pi/6) + } + + @Test + fun testTanh() { + val x = Variable(PI / 6) + val y = deriv { tanh(x) } + assertApprox(1.0 / sqrt(3.0), y.value) // y = tan(pi/6) = 1/sqrt(3) + assertApprox(1.0 / kotlin.math.cosh(PI / 6.0).pow(2), y.deriv(x)) // dy/dx = sec(PI/6)^2 + } + + @Test + fun testAsinh() { + val x = Variable(PI / 6) + val y = deriv { asinh(x) } + assertApprox(kotlin.math.asinh(PI / 6.0), y.value) // y = asinh(pi/6) + assertApprox(6.0 / sqrt(36 + PI * PI), y.deriv(x)) // dy/dx = 6/sqrt(pi^2+36) + } + + @Test + fun testAcosh() { + val x = Variable(PI / 6) + val y = deriv { acosh(x) } + assertApprox(kotlin.math.acosh(PI / 6.0), y.value) // y = acosh(pi/6) + assertApprox(-6.0 / sqrt(36.0 - PI * PI), y.deriv(x)) // dy/dx = -6/sqrt(36-pi^2) + } + + @Test + fun testAtanh() { + val x = Variable(PI / 6.0) + val y = deriv { atanh(x) } + assertApprox(kotlin.math.atanh(PI / 6.0), y.value) // y = atanh(pi/6) + assertApprox(-36.0 / (PI * PI - 36.0), y.deriv(x)) // dy/dx = -36/(pi^2-36) } @Test From 6374d7a36099c84a03a958646651da58d2de6d1c Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Sun, 20 Sep 2020 21:05:37 +0700 Subject: [PATCH 18/26] Update tests --- .../kotlin/scientifik/kmath/misc/AutoDiffTest.kt | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt b/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt index aba6c06ca..91d32cf8e 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt +++ b/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt @@ -202,24 +202,24 @@ class AutoDiffTest { fun testSinh() { val x = Variable(0.0) val y = deriv { sinh(x) } - assertApprox(kotlin.math.sinh(0.0), y.value) // y = sinh(pi/6) - assertApprox(kotlin.math.cosh(0.0), y.deriv(x)) // dy/dx = cosh(pi/6) + assertApprox(kotlin.math.sinh(0.0), y.value) // y = sinh(0) + assertApprox(kotlin.math.cosh(0.0), y.deriv(x)) // dy/dx = cosh(0) } @Test fun testCosh() { val x = Variable(0.0) val y = deriv { cosh(x) } - assertApprox(1.0, y.value) //y = cosh(pi/6) - assertApprox(0.0, y.deriv(x)) // dy/dx = sinh(pi/6) + assertApprox(1.0, y.value) //y = cosh(0) + assertApprox(0.0, y.deriv(x)) // dy/dx = sinh(0) } @Test fun testTanh() { val x = Variable(PI / 6) val y = deriv { tanh(x) } - assertApprox(1.0 / sqrt(3.0), y.value) // y = tan(pi/6) = 1/sqrt(3) - assertApprox(1.0 / kotlin.math.cosh(PI / 6.0).pow(2), y.deriv(x)) // dy/dx = sec(PI/6)^2 + assertApprox(1.0 / sqrt(3.0), y.value) // y = tanh(pi/6) + assertApprox(1.0 / kotlin.math.cosh(PI / 6.0).pow(2), y.deriv(x)) // dy/dx = sech(pi/6)^2 } @Test From da742d6c69513ed35c946d287767f34a0b807992 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Sun, 20 Sep 2020 22:25:50 +0300 Subject: [PATCH 19/26] Fix things after merge --- build.gradle.kts | 15 +++---------- kmath-ast/build.gradle.kts | 2 +- .../kotlin/scientifik/kmath/ast/parser.kt | 13 ++++++------ .../kotlin/scientifik/kmath/misc/AutoDiff.kt | 21 +++++++++---------- settings.gradle.kts | 6 +++--- 5 files changed, 23 insertions(+), 34 deletions(-) rename kmath-ast/src/{commonMain => jvmMain}/kotlin/scientifik/kmath/ast/parser.kt (89%) diff --git a/build.gradle.kts b/build.gradle.kts index 384db5385..838a05771 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -1,11 +1,10 @@ -plugins { id("ru.mipt.npm.publish") apply false } plugins { - id("scientifik.publish") apply false + id("ru.mipt.npm.base") id("org.jetbrains.changelog") version "0.4.0" } -val kmathVersion by extra("0.1.4") -val bintrayRepo by extra("scientifik") +val kmathVersion by extra("0.2.0-dev-1") +val bintrayRepo by extra("kscience") val githubProject by extra("kmath") allprojects { @@ -17,14 +16,6 @@ allprojects { group = "kscience.kmath" version = kmathVersion - - afterEvaluate { - extensions.findByType()?.run { - sourceSets.all { - languageSettings.useExperimentalAnnotation("kotlin.contracts.ExperimentalContracts") - } - } - } } subprojects { if (name.startsWith("kmath")) apply(plugin = "ru.mipt.npm.publish") } diff --git a/kmath-ast/build.gradle.kts b/kmath-ast/build.gradle.kts index 3e0a441b7..df876df10 100644 --- a/kmath-ast/build.gradle.kts +++ b/kmath-ast/build.gradle.kts @@ -6,7 +6,6 @@ kotlin.sourceSets { commonMain { dependencies { api(project(":kmath-core")) - implementation("com.github.h0tk3y.betterParse:better-parse:0.4.0") } } @@ -14,6 +13,7 @@ kotlin.sourceSets { dependencies { implementation("org.ow2.asm:asm:8.0.1") implementation("org.ow2.asm:asm-commons:8.0.1") + implementation("com.github.h0tk3y.betterParse:better-parse:0.4.0") implementation(kotlin("reflect")) } } diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt similarity index 89% rename from kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt rename to kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt index e48b2817f..8ccbf4606 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/parser.kt +++ b/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt @@ -16,8 +16,7 @@ import scientifik.kmath.operations.RingOperations import scientifik.kmath.operations.SpaceOperations /** - * TODO move to core - * + * TODO move to common after IR version is released * @author Alexander Nozik and Iaroslav Postovalov */ public object ArithmeticsEvaluator : Grammar() { @@ -37,14 +36,14 @@ public object ArithmeticsEvaluator : Grammar() { private val number: Parser by num use { MST.Numeric(text.toDouble()) } private val singular: Parser by id use { MST.Symbolic(text) } - private val unaryFunction: Parser by (id and -lpar and parser(::subSumChain) and -rpar) + private val unaryFunction: Parser by (id and -lpar and parser(ArithmeticsEvaluator::subSumChain) and -rpar) .map { (id, term) -> MST.Unary(id.text, term) } private val binaryFunction: Parser by id .and(-lpar) - .and(parser(::subSumChain)) + .and(parser(ArithmeticsEvaluator::subSumChain)) .and(-comma) - .and(parser(::subSumChain)) + .and(parser(ArithmeticsEvaluator::subSumChain)) .and(-rpar) .map { (id, left, right) -> MST.Binary(id.text, left, right) } @@ -52,8 +51,8 @@ public object ArithmeticsEvaluator : Grammar() { .or(binaryFunction) .or(unaryFunction) .or(singular) - .or(-minus and parser(::term) map { MST.Unary(SpaceOperations.MINUS_OPERATION, it) }) - .or(-lpar and parser(::subSumChain) and -rpar) + .or(-minus and parser(ArithmeticsEvaluator::term) map { MST.Unary(SpaceOperations.MINUS_OPERATION, it) }) + .or(-lpar and parser(ArithmeticsEvaluator::subSumChain) and -rpar) private val powChain: Parser by leftAssociative(term = term, operator = pow) { a, _, b -> MST.Binary(PowerOperations.POW_OPERATION, a, b) diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt index 1c4cc63b6..b09bcff9f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt @@ -65,7 +65,6 @@ public inline fun > F.deriv(body: AutoDiffField.() - } } - public abstract class AutoDiffField> : Field> { public abstract val context: F @@ -209,39 +208,39 @@ public fun > AutoDiffField.sin(x: Variable> AutoDiffField.cos(x: Variable): Variable = derive(variable { cos(x.value) }) { z -> x.d -= z.d * sin(x.value) } -fun > AutoDiffField.tan(x: Variable): Variable = +public fun > AutoDiffField.tan(x: Variable): Variable = derive(variable { tan(x.value) }) { z -> val c = cos(x.value) x.d += z.d / (c * c) } -fun > AutoDiffField.asin(x: Variable): Variable = +public fun > AutoDiffField.asin(x: Variable): Variable = derive(variable { asin(x.value) }) { z -> x.d += z.d / sqrt(one - x.value * x.value) } -fun > AutoDiffField.acos(x: Variable): Variable = +public fun > AutoDiffField.acos(x: Variable): Variable = derive(variable { acos(x.value) }) { z -> x.d -= z.d / sqrt(one - x.value * x.value) } -fun > AutoDiffField.atan(x: Variable): Variable = +public fun > AutoDiffField.atan(x: Variable): Variable = derive(variable { atan(x.value) }) { z -> x.d += z.d / (one + x.value * x.value) } -fun > AutoDiffField.sinh(x: Variable): Variable = +public fun > AutoDiffField.sinh(x: Variable): Variable = derive(variable { sin(x.value) }) { z -> x.d += z.d * cosh(x.value) } -fun > AutoDiffField.cosh(x: Variable): Variable = +public fun > AutoDiffField.cosh(x: Variable): Variable = derive(variable { cos(x.value) }) { z -> x.d += z.d * sinh(x.value) } -fun > AutoDiffField.tanh(x: Variable): Variable = +public fun > AutoDiffField.tanh(x: Variable): Variable = derive(variable { tan(x.value) }) { z -> val c = cosh(x.value) x.d += z.d / (c * c) } -fun > AutoDiffField.asinh(x: Variable): Variable = +public fun > AutoDiffField.asinh(x: Variable): Variable = derive(variable { asinh(x.value) }) { z -> x.d += z.d / sqrt(one + x.value * x.value) } -fun > AutoDiffField.acosh(x: Variable): Variable = +public fun > AutoDiffField.acosh(x: Variable): Variable = derive(variable { acosh(x.value) }) { z -> x.d += z.d / (sqrt((x.value - one) * (x.value + one))) } -fun > AutoDiffField.atanh(x: Variable): Variable = +public fun > AutoDiffField.atanh(x: Variable): Variable = derive(variable { atanh(x.value) }) { z -> x.d += z.d / (one - x.value * x.value) } diff --git a/settings.gradle.kts b/settings.gradle.kts index b78ed4647..666a05e45 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -1,12 +1,13 @@ pluginManagement { - val toolsVersion = "0.6.0-dev-5" + val toolsVersion = "0.6.0" plugins { id("kotlinx.benchmark") version "0.2.0-dev-20" + id("ru.mipt.npm.base") version toolsVersion id("ru.mipt.npm.mpp") version toolsVersion id("ru.mipt.npm.jvm") version toolsVersion id("ru.mipt.npm.publish") version toolsVersion - kotlin("plugin.allopen") version "1.4.20-dev-3898-14" + kotlin("plugin.allopen") } repositories { @@ -17,7 +18,6 @@ pluginManagement { maven("https://dl.bintray.com/mipt-npm/scientifik") maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlinx") - } maven("https://dl.bintray.com/kotlin/kotlin-dev/") } } From 28190f980012018392dcfd98c3010164e5716142 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Sun, 20 Sep 2020 22:39:27 +0300 Subject: [PATCH 20/26] scientifik -> kscience --- README.md | 8 ++-- doc/algebra.md | 8 ++-- examples/build.gradle.kts | 2 +- .../kmath/structures/ArrayBenchmark.kt | 39 +++++++++++++++++++ .../kmath/structures/BufferBenchmark.kt | 6 +-- .../kmath/structures/NDFieldBenchmark.kt | 6 +-- .../kmath/structures/ViktorBenchmark.kt | 8 ++-- .../kmath/utils/utils.kt | 2 +- .../kmath/structures/ArrayBenchmark.kt | 37 ------------------ .../ast/ExpressionsInterpretersBenchmark.kt | 14 +++---- .../commons/prob/DistributionBenchmark.kt | 6 +-- .../kmath/commons/prob/DistributionDemo.kt | 12 +++--- .../kmath/operations/BigIntDemo.kt | 2 +- .../kmath/operations/ComplexDemo.kt | 8 ++-- .../kmath/structures/ComplexND.kt | 10 ++--- .../kmath/structures/NDField.kt | 6 +-- .../structures/StructureReadBenchmark.kt | 2 +- .../structures/StructureWriteBenchmark.kt | 2 +- .../kmath/structures/typeSafeDimensions.kt | 12 +++--- kmath-ast/README.md | 18 ++++----- .../{scientifik => kscience}/kmath/ast/MST.kt | 8 ++-- .../kmath/ast/MstAlgebra.kt | 4 +- .../kmath/ast/MstExpression.kt | 6 +-- .../{scientifik => kscience}/kmath/asm/asm.kt | 18 ++++----- .../kmath/asm/internal/AsmBuilder.kt | 14 +++---- .../kmath/asm/internal/MstType.kt | 4 +- .../kmath/asm/internal/codegenUtils.kt | 16 ++++---- .../kmath/asm/internal/mapIntrinsics.kt | 2 +- .../kmath/ast/parser.kt | 10 ++--- .../scietifik/kmath/asm/TestAsmAlgebras.kt | 14 +++---- .../scietifik/kmath/asm/TestAsmExpressions.kt | 10 ++--- .../kmath/asm/TestAsmSpecialization.kt | 8 ++-- .../scietifik/kmath/asm/TestAsmVariables.kt | 6 +-- .../kotlin/scietifik/kmath/ast/AsmTest.kt | 14 +++---- .../kmath/ast/ParserPrecedenceTest.kt | 8 ++-- .../kotlin/scietifik/kmath/ast/ParserTest.kt | 16 ++++---- .../commons/expressions/DiffExpression.kt | 12 +++--- .../kmath/commons/linear/CMMatrix.kt | 8 ++-- .../kmath/commons/linear/CMSolver.kt | 6 +-- .../random/CMRandomGeneratorWrapper.kt | 4 +- .../commons/transform/Transformations.kt | 10 ++--- .../kmath/commons/expressions/AutoDiffTest.kt | 4 +- kmath-core/README.md | 12 +++--- .../kmath/domains/Domain.kt | 4 +- .../kmath/domains/HyperSquareDomain.kt | 8 ++-- .../kmath/domains/RealDomain.kt | 4 +- .../kmath/domains/UnconstrainedDomain.kt | 4 +- .../kmath/domains/UnivariateDomain.kt | 6 +-- .../kmath/expressions/Expression.kt | 4 +- .../FunctionalExpressionAlgebra.kt | 4 +- .../kmath/expressions/expressionBuilders.kt | 10 ++--- .../kmath/linear/BufferMatrix.kt | 8 ++-- .../kmath/linear/FeaturedMatrix.kt | 11 +++--- .../kmath/linear/LUPDecomposition.kt | 17 ++++---- .../kmath/linear/LinearAlgebra.kt | 8 ++-- .../kmath/linear/MatrixBuilder.kt | 10 ++--- .../kmath/linear/MatrixContext.kt | 18 ++++----- .../kmath/linear/MatrixFeatures.kt | 2 +- .../kmath/linear/VectorSpace.kt | 12 +++--- .../kmath/linear/VirtualMatrix.kt | 4 +- .../kmath/misc/AutoDiff.kt | 14 +++---- .../kmath/misc/Grids.kt | 2 +- .../kmath/misc/cumulative.kt | 7 ++-- .../kmath/operations/Algebra.kt | 4 +- .../kmath/operations/AlgebraElements.kt | 2 +- .../kmath/operations/AlgebraExtensions.kt | 2 +- .../kmath/operations/BigInt.kt | 9 ++--- .../kmath/operations/Complex.kt | 15 ++++--- .../kmath/operations/NumberAlgebra.kt | 2 +- .../kmath/operations/OptionalOperations.kt | 2 +- .../kmath/structures/BoxingNDField.kt | 6 +-- .../kmath/structures/BoxingNDRing.kt | 6 +-- .../kmath/structures/BufferAccessor2D.kt | 2 +- .../kmath/structures/BufferedNDAlgebra.kt | 4 +- .../kmath/structures/BufferedNDElement.kt | 4 +- .../kmath/structures/Buffers.kt | 7 ++-- .../kmath/structures/ComplexNDField.kt | 10 ++--- .../kmath/structures/ExtendedNDField.kt | 4 +- .../kmath/structures/FlaggedBuffer.kt | 3 +- .../kmath/structures/FloatBuffer.kt | 4 +- .../kmath/structures/IntBuffer.kt | 4 +- .../kmath/structures/LongBuffer.kt | 4 +- .../kmath/structures/MemoryBuffer.kt | 4 +- .../kmath/structures/NDAlgebra.kt | 10 ++--- .../kmath/structures/NDElement.kt | 11 +++--- .../kmath/structures/NDStructure.kt | 3 +- .../kmath/structures/RealBuffer.kt | 4 +- .../kmath/structures/RealBufferField.kt | 6 +-- .../kmath/structures/RealNDField.kt | 6 +-- .../kmath/structures/ShortBuffer.kt | 4 +- .../kmath/structures/ShortNDRing.kt | 6 +-- .../kmath/structures/Structure1D.kt | 2 +- .../kmath/structures/Structure2D.kt | 2 +- .../kmath/expressions/ExpressionFieldTest.kt | 10 ++--- .../kmath/linear/MatrixTest.kt | 8 ++-- .../kmath/linear/RealLUSolverTest.kt | 4 +- .../kmath/linear/VectorSpaceTest.kt | 0 .../kmath/misc/AutoDiffTest.kt | 6 +-- .../kmath/misc/CumulativeKtTest.kt | 2 +- .../kmath/operations/BigIntAlgebraTest.kt | 4 +- .../kmath/operations/BigIntConstructorTest.kt | 2 +- .../kmath/operations/BigIntConversionsTest.kt | 2 +- .../kmath/operations/BigIntOperationsTest.kt | 2 +- .../kmath/operations/ComplexFieldTest.kt | 4 +- .../kmath/operations/ComplexTest.kt | 2 +- .../kmath/operations/RealFieldTest.kt | 4 +- .../operations/internal/AlgebraicVerifier.kt | 4 +- .../operations/internal/FieldVerifier.kt | 6 +-- .../kmath/operations/internal/RingVerifier.kt | 6 +-- .../operations/internal/SpaceVerifier.kt | 6 +-- .../kmath/structures/ComplexBufferSpecTest.kt | 6 +-- .../kmath/structures/NDFieldTest.kt | 2 +- .../kmath/structures/NumberNDFieldTest.kt | 8 ++-- .../kmath/operations/BigNumbers.kt | 2 +- .../kmath/chains/BlockingIntChain.kt | 2 +- .../kmath/chains/BlockingRealChain.kt | 2 +- .../kmath/chains/Chain.kt | 2 +- .../kmath/chains/flowExtra.kt | 8 ++-- .../kmath/coroutines/coroutinesExtra.kt | 2 +- .../kmath/streaming/BufferFlow.kt | 12 +++--- .../kmath/streaming/RingBuffer.kt | 8 ++-- .../kmath/chains/ChainExt.kt | 2 +- .../kmath/structures/LazyNDStructure.kt | 4 +- .../kmath/streaming/BufferFlowTest.kt | 8 ++-- .../kmath/streaming/RingBufferTest.kt | 4 +- .../kmath/dimensions/Dimensions.kt | 2 +- .../kmath/dimensions/Wrappers.kt | 20 +++++----- .../dimensions/DMatrixContextTest.kt | 8 ++-- .../kmath/dimensions/dim.kt | 2 +- .../kmath/dimensions/dim.kt | 2 +- .../kmath/real/RealVector.kt | 22 +++++------ .../kmath/real/realBuffer.kt | 4 +- .../kmath/real/realMatrix.kt | 21 +++++----- .../kmath/linear/VectorTest.kt | 6 +-- .../scientific.kmath.real/RealMatrixTest.kt | 8 ++-- .../kmath/functions/Piecewise.kt | 4 +- .../kmath/functions/Polynomial.kt | 8 ++-- .../kmath/functions/functions.kt | 6 +-- .../kmath/interpolation/Interpolator.kt | 12 +++--- .../kmath/interpolation/LinearInterpolator.kt | 12 +++--- .../kmath/interpolation/LoessInterpolator.kt | 8 ++-- .../kmath/interpolation/SplineInterpolator.kt | 14 +++---- .../kmath/interpolation/XYPointSet.kt | 6 +-- .../interpolation/LinearInterpolatorTest.kt | 8 ++-- .../kmath/geometry/Euclidean2DSpace.kt | 8 ++-- .../kmath/geometry/Euclidean3DSpace.kt | 8 ++-- .../kmath/geometry/GeometrySpace.kt | 4 +- .../kmath/geometry/Line.kt | 2 +- .../kscience/kmath/geometry/ReferenceFrame.kt | 3 ++ .../kmath/geometry/ReferenceFrame.kt | 3 -- .../kmath/histogram/Counters.kt | 2 +- .../kmath/histogram/Histogram.kt | 10 ++--- .../kmath/histogram/RealHistogram.kt | 12 +++--- .../histogram/MultivariateHistogramTest.kt | 8 ++-- .../kmath/histogram/Counters.kt | 2 +- .../kmath/histogram/Counters.kt | 2 +- .../kmath/histogram/UnivariateHistogram.kt | 8 ++-- .../kotlin/scientifik/memory/Memory.kt | 2 +- .../kotlin/scientifik/memory/MemorySpec.kt | 2 +- .../scientifik/memory/DataViewMemory.kt | 2 +- .../scientifik/memory/ByteBufferMemory.kt | 2 +- .../kmath/prob/Distribution.kt | 10 ++--- .../kmath/prob/FactorizedDistribution.kt | 6 +-- .../kmath/prob/RandomChain.kt | 4 +- .../kmath/prob/RandomGenerator.kt | 2 +- .../kmath/prob/SamplerAlgebra.kt | 14 +++---- .../kmath/prob/Statistic.kt | 12 +++--- .../kmath/prob/UniformDistribution.kt | 6 +-- .../kmath/prob/RandomSourceGenerator.kt | 2 +- .../kmath/prob/distributions.kt | 9 ++--- .../kmath/prob/CommonsDistributionsTest.kt | 2 +- .../kmath/prob/SamplerTest.kt | 2 +- .../kmath/prob/StatisticTest.kt | 4 +- .../kmath/viktor/ViktorBuffer.kt | 4 +- .../kmath/viktor/ViktorNDStructure.kt | 12 +++--- settings.gradle.kts | 2 +- 176 files changed, 599 insertions(+), 620 deletions(-) create mode 100644 examples/src/benchmarks/kotlin/kscience/kmath/structures/ArrayBenchmark.kt rename examples/src/benchmarks/kotlin/{scientifik => kscience}/kmath/structures/BufferBenchmark.kt (83%) rename examples/src/benchmarks/kotlin/{scientifik => kscience}/kmath/structures/NDFieldBenchmark.kt (89%) rename examples/src/benchmarks/kotlin/{scientifik => kscience}/kmath/structures/ViktorBenchmark.kt (89%) rename examples/src/benchmarks/kotlin/{scientifik => kscience}/kmath/utils/utils.kt (91%) delete mode 100644 examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt rename examples/src/main/kotlin/{scientifik => kscience}/kmath/ast/ExpressionsInterpretersBenchmark.kt (82%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/commons/prob/DistributionBenchmark.kt (94%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/commons/prob/DistributionDemo.kt (72%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/operations/BigIntDemo.kt (72%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/operations/ComplexDemo.kt (68%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/structures/ComplexND.kt (85%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/structures/NDField.kt (93%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/structures/StructureReadBenchmark.kt (96%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/structures/StructureWriteBenchmark.kt (96%) rename examples/src/main/kotlin/{scientifik => kscience}/kmath/structures/typeSafeDimensions.kt (71%) rename kmath-ast/src/commonMain/kotlin/{scientifik => kscience}/kmath/ast/MST.kt (94%) rename kmath-ast/src/commonMain/kotlin/{scientifik => kscience}/kmath/ast/MstAlgebra.kt (98%) rename kmath-ast/src/commonMain/kotlin/{scientifik => kscience}/kmath/ast/MstExpression.kt (97%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/asm/asm.kt (83%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/asm/internal/AsmBuilder.kt (98%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/asm/internal/MstType.kt (81%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/asm/internal/codegenUtils.kt (94%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/asm/internal/mapIntrinsics.kt (89%) rename kmath-ast/src/jvmMain/kotlin/{scientifik => kscience}/kmath/ast/parser.kt (93%) rename kmath-commons/src/main/kotlin/{scientifik => kscience}/kmath/commons/expressions/DiffExpression.kt (95%) rename kmath-commons/src/main/kotlin/{scientifik => kscience}/kmath/commons/linear/CMMatrix.kt (95%) rename kmath-commons/src/main/kotlin/{scientifik => kscience}/kmath/commons/linear/CMSolver.kt (91%) rename kmath-commons/src/main/kotlin/{scientifik => kscience}/kmath/commons/random/CMRandomGeneratorWrapper.kt (92%) rename kmath-commons/src/main/kotlin/{scientifik => kscience}/kmath/commons/transform/Transformations.kt (94%) rename kmath-commons/src/test/kotlin/{scientifik => kscience}/kmath/commons/expressions/AutoDiffTest.kt (92%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/domains/Domain.kt (83%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/domains/HyperSquareDomain.kt (92%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/domains/RealDomain.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/domains/UnconstrainedDomain.kt (94%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/domains/UnivariateDomain.kt (92%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/expressions/Expression.kt (92%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/expressions/FunctionalExpressionAlgebra.kt (99%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/expressions/expressionBuilders.kt (86%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/BufferMatrix.kt (96%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/FeaturedMatrix.kt (92%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/LUPDecomposition.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/LinearAlgebra.kt (82%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/MatrixBuilder.kt (87%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/MatrixContext.kt (90%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/MatrixFeatures.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/VectorSpace.kt (89%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/linear/VirtualMatrix.kt (96%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/misc/AutoDiff.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/misc/Grids.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/misc/cumulative.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/Algebra.kt (99%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/AlgebraElements.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/AlgebraExtensions.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/BigInt.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/Complex.kt (94%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/NumberAlgebra.kt (99%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/operations/OptionalOperations.kt (99%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/BoxingNDField.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/BoxingNDRing.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/BufferAccessor2D.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/BufferedNDAlgebra.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/BufferedNDElement.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/Buffers.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/ComplexNDField.kt (96%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/ExtendedNDField.kt (94%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/FlaggedBuffer.kt (96%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/FloatBuffer.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/IntBuffer.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/LongBuffer.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/MemoryBuffer.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/NDAlgebra.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/NDElement.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/NDStructure.kt (99%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/RealBuffer.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/RealBufferField.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/RealNDField.kt (97%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/ShortBuffer.kt (95%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/ShortNDRing.kt (96%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/Structure1D.kt (98%) rename kmath-core/src/commonMain/kotlin/{scientifik => kscience}/kmath/structures/Structure2D.kt (97%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/expressions/ExpressionFieldTest.kt (87%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/linear/MatrixTest.kt (91%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/linear/RealLUSolverTest.kt (92%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/linear/VectorSpaceTest.kt (100%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/misc/AutoDiffTest.kt (98%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/misc/CumulativeKtTest.kt (90%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/BigIntAlgebraTest.kt (94%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/BigIntConstructorTest.kt (93%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/BigIntConversionsTest.kt (96%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/BigIntOperationsTest.kt (99%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/ComplexFieldTest.kt (96%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/ComplexTest.kt (96%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/RealFieldTest.kt (75%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/internal/AlgebraicVerifier.kt (55%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/internal/FieldVerifier.kt (88%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/internal/RingVerifier.kt (92%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/operations/internal/SpaceVerifier.kt (92%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/structures/ComplexBufferSpecTest.kt (68%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/structures/NDFieldTest.kt (87%) rename kmath-core/src/commonTest/kotlin/{scientifik => kscience}/kmath/structures/NumberNDFieldTest.kt (90%) rename kmath-core/src/jvmMain/kotlin/{scientifik => kscience}/kmath/operations/BigNumbers.kt (98%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/chains/BlockingIntChain.kt (89%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/chains/BlockingRealChain.kt (90%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/chains/Chain.kt (99%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/chains/flowExtra.kt (80%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/coroutines/coroutinesExtra.kt (98%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/streaming/BufferFlow.kt (89%) rename kmath-coroutines/src/commonMain/kotlin/{scientifik => kscience}/kmath/streaming/RingBuffer.kt (92%) rename kmath-coroutines/src/jvmMain/kotlin/{scientifik => kscience}/kmath/chains/ChainExt.kt (93%) rename kmath-coroutines/src/jvmMain/kotlin/{scientifik => kscience}/kmath/structures/LazyNDStructure.kt (96%) rename kmath-coroutines/src/jvmTest/kotlin/{scientifik => kscience}/kmath/streaming/BufferFlowTest.kt (88%) rename kmath-coroutines/src/jvmTest/kotlin/{scientifik => kscience}/kmath/streaming/RingBufferTest.kt (91%) rename kmath-dimensions/src/commonMain/kotlin/{scientifik => kscience}/kmath/dimensions/Dimensions.kt (95%) rename kmath-dimensions/src/commonMain/kotlin/{scientifik => kscience}/kmath/dimensions/Wrappers.kt (93%) rename kmath-dimensions/src/jsMain/kotlin/{scientifik => kscience}/kmath/dimensions/dim.kt (94%) rename kmath-dimensions/src/jvmMain/kotlin/{scientifik => kscience}/kmath/dimensions/dim.kt (91%) rename kmath-for-real/src/commonMain/kotlin/{scientifik => kscience}/kmath/real/RealVector.kt (76%) rename kmath-for-real/src/commonMain/kotlin/{scientifik => kscience}/kmath/real/realBuffer.kt (67%) rename kmath-for-real/src/commonMain/kotlin/{scientifik => kscience}/kmath/real/realMatrix.kt (91%) rename kmath-for-real/src/commonTest/kotlin/{scientifik => kscience}/kmath/linear/VectorTest.kt (88%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/functions/Piecewise.kt (93%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/functions/Polynomial.kt (93%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/functions/functions.kt (88%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/interpolation/Interpolator.kt (83%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/interpolation/LinearInterpolator.kt (76%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/interpolation/LoessInterpolator.kt (98%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/interpolation/SplineInterpolator.kt (86%) rename kmath-functions/src/commonMain/kotlin/{scientifik => kscience}/kmath/interpolation/XYPointSet.kt (92%) rename kmath-functions/src/commonTest/kotlin/{scientifik => kscience}/kmath/interpolation/LinearInterpolatorTest.kt (77%) rename kmath-geometry/src/commonMain/kotlin/{scientifik => kscience}/kmath/geometry/Euclidean2DSpace.kt (90%) rename kmath-geometry/src/commonMain/kotlin/{scientifik => kscience}/kmath/geometry/Euclidean3DSpace.kt (91%) rename kmath-geometry/src/commonMain/kotlin/{scientifik => kscience}/kmath/geometry/GeometrySpace.kt (76%) rename kmath-geometry/src/commonMain/kotlin/{scientifik => kscience}/kmath/geometry/Line.kt (81%) create mode 100644 kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/ReferenceFrame.kt delete mode 100644 kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt rename kmath-histograms/src/commonMain/kotlin/{scientifik => kscience}/kmath/histogram/Counters.kt (91%) rename kmath-histograms/src/commonMain/kotlin/{scientifik => kscience}/kmath/histogram/Histogram.kt (87%) rename kmath-histograms/src/commonMain/kotlin/{scientifik => kscience}/kmath/histogram/RealHistogram.kt (95%) rename kmath-histograms/src/jsMain/kotlin/{scientifik => kscience}/kmath/histogram/Counters.kt (94%) rename kmath-histograms/src/jvmMain/kotlin/{scientifik => kscience}/kmath/histogram/Counters.kt (84%) rename kmath-histograms/src/jvmMain/kotlin/{scientifik => kscience}/kmath/histogram/UnivariateHistogram.kt (95%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/Distribution.kt (90%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/FactorizedDistribution.kt (93%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/RandomChain.kt (87%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/RandomGenerator.kt (98%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/SamplerAlgebra.kt (79%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/Statistic.kt (92%) rename kmath-prob/src/commonMain/kotlin/{scientifik => kscience}/kmath/prob/UniformDistribution.kt (87%) rename kmath-prob/src/jvmMain/kotlin/{scientifik => kscience}/kmath/prob/RandomSourceGenerator.kt (98%) rename kmath-prob/src/jvmMain/kotlin/{scientifik => kscience}/kmath/prob/distributions.kt (95%) rename kmath-prob/src/jvmTest/kotlin/{scientifik => kscience}/kmath/prob/CommonsDistributionsTest.kt (96%) rename kmath-prob/src/jvmTest/kotlin/{scientifik => kscience}/kmath/prob/SamplerTest.kt (92%) rename kmath-prob/src/jvmTest/kotlin/{scientifik => kscience}/kmath/prob/StatisticTest.kt (91%) rename kmath-viktor/src/main/kotlin/{scientifik => kscience}/kmath/viktor/ViktorBuffer.kt (88%) rename kmath-viktor/src/main/kotlin/{scientifik => kscience}/kmath/viktor/ViktorNDStructure.kt (92%) diff --git a/README.md b/README.md index 08d1e988a..c2e67e815 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@ ![Gradle build](https://github.com/mipt-npm/kmath/workflows/Gradle%20build/badge.svg) -Bintray: [ ![Download](https://api.bintray.com/packages/mipt-npm/scientifik/kmath-core/images/download.svg) ](https://bintray.com/mipt-npm/scientifik/kmath-core/_latestVersion) +Bintray: [ ![Download](https://api.bintray.com/packages/mipt-npm/kscience/kmath-core/images/download.svg) ](https://bintray.com/mipt-npm/kscience/kmath-core/_latestVersion) Bintray-dev: [ ![Download](https://api.bintray.com/packages/mipt-npm/dev/kmath-core/images/download.svg) ](https://bintray.com/mipt-npm/dev/kmath-core/_latestVersion) @@ -80,12 +80,12 @@ Release artifacts are accessible from bintray with following configuration (see ```kotlin repositories{ - maven("https://dl.bintray.com/mipt-npm/scientifik") + maven("https://dl.bintray.com/mipt-npm/kscience") } dependencies{ - api("scientifik:kmath-core:${kmathVersion}") - //api("scientifik:kmath-core-jvm:${kmathVersion}") for jvm-specific version + api("kscience.kmath:kmath-core:${kmathVersion}") + //api("kscience.kmath:kmath-core-jvm:${kmathVersion}") for jvm-specific version } ``` diff --git a/doc/algebra.md b/doc/algebra.md index b1b77a31f..c3227517f 100644 --- a/doc/algebra.md +++ b/doc/algebra.md @@ -5,7 +5,7 @@ operation, say `+`, one needs two objects of a type `T` and an algebra context, say `Space`. Next one needs to run the actual operation in the context: ```kotlin -import scientifik.kmath.operations.* +import kscience.kmath.operations.* val a: T = ... val b: T = ... @@ -47,7 +47,7 @@ but it also holds reference to the `ComplexField` singleton, which allows perfor numbers without explicit involving the context like: ```kotlin -import scientifik.kmath.operations.* +import kscience.kmath.operations.* // Using elements val c1 = Complex(1.0, 1.0) @@ -82,7 +82,7 @@ operations in all performance-critical places. The performance of element operat KMath submits both contexts and elements for builtin algebraic structures: ```kotlin -import scientifik.kmath.operations.* +import kscience.kmath.operations.* val c1 = Complex(1.0, 2.0) val c2 = ComplexField.i @@ -95,7 +95,7 @@ val c3 = ComplexField { c1 + c2 } Also, `ComplexField` features special operations to mix complex and real numbers, for example: ```kotlin -import scientifik.kmath.operations.* +import kscience.kmath.operations.* val c1 = Complex(1.0, 2.0) val c2 = ComplexField { c1 - 1.0 } // Returns: Complex(re=0.0, im=2.0) diff --git a/examples/build.gradle.kts b/examples/build.gradle.kts index 40da41d2b..3d193efce 100644 --- a/examples/build.gradle.kts +++ b/examples/build.gradle.kts @@ -10,7 +10,7 @@ plugins { allOpen.annotation("org.openjdk.jmh.annotations.State") repositories { - maven("https://dl.bintray.com/mipt-npm/scientifik") + maven("https://dl.bintray.com/mipt-npm/kscience") maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlin-dev/") mavenCentral() diff --git a/examples/src/benchmarks/kotlin/kscience/kmath/structures/ArrayBenchmark.kt b/examples/src/benchmarks/kotlin/kscience/kmath/structures/ArrayBenchmark.kt new file mode 100644 index 000000000..2673552f5 --- /dev/null +++ b/examples/src/benchmarks/kotlin/kscience/kmath/structures/ArrayBenchmark.kt @@ -0,0 +1,39 @@ +package kscience.kmath.structures + +import org.openjdk.jmh.annotations.Benchmark +import org.openjdk.jmh.annotations.Scope +import org.openjdk.jmh.annotations.State +import java.nio.IntBuffer + +@State(Scope.Benchmark) +class ArrayBenchmark { + @Benchmark + fun benchmarkArrayRead() { + var res = 0 + for (i in 1.._root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size) res += _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.array[_root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size - i] + } + + @Benchmark + fun benchmarkBufferRead() { + var res = 0 + for (i in 1.._root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size) res += _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.arrayBuffer.get( + _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size - i) + } + + @Benchmark + fun nativeBufferRead() { + var res = 0 + for (i in 1.._root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size) res += _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.nativeBuffer.get( + _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size - i) + } + + companion object { + const val size: Int = 1000 + val array: IntArray = IntArray(_root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size) { it } + val arrayBuffer: IntBuffer = IntBuffer.wrap(_root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.array) + + val nativeBuffer: IntBuffer = IntBuffer.allocate(_root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size).also { + for (i in 0 until _root_ide_package_.kscience.kmath.structures.ArrayBenchmark.Companion.size) it.put(i, i) + } + } +} diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/BufferBenchmark.kt b/examples/src/benchmarks/kotlin/kscience/kmath/structures/BufferBenchmark.kt similarity index 83% rename from examples/src/benchmarks/kotlin/scientifik/kmath/structures/BufferBenchmark.kt rename to examples/src/benchmarks/kotlin/kscience/kmath/structures/BufferBenchmark.kt index e40b0c4b7..009d51001 100644 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/BufferBenchmark.kt +++ b/examples/src/benchmarks/kotlin/kscience/kmath/structures/BufferBenchmark.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.structures +package kscience.kmath.structures +import kscience.kmath.operations.Complex +import kscience.kmath.operations.complex import org.openjdk.jmh.annotations.Benchmark import org.openjdk.jmh.annotations.Scope import org.openjdk.jmh.annotations.State -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.complex @State(Scope.Benchmark) class BufferBenchmark { diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/NDFieldBenchmark.kt b/examples/src/benchmarks/kotlin/kscience/kmath/structures/NDFieldBenchmark.kt similarity index 89% rename from examples/src/benchmarks/kotlin/scientifik/kmath/structures/NDFieldBenchmark.kt rename to examples/src/benchmarks/kotlin/kscience/kmath/structures/NDFieldBenchmark.kt index 46da6c6d8..64f279c39 100644 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/NDFieldBenchmark.kt +++ b/examples/src/benchmarks/kotlin/kscience/kmath/structures/NDFieldBenchmark.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.structures +package kscience.kmath.structures +import kscience.kmath.operations.RealField +import kscience.kmath.operations.invoke import org.openjdk.jmh.annotations.Benchmark import org.openjdk.jmh.annotations.Scope import org.openjdk.jmh.annotations.State -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke @State(Scope.Benchmark) class NDFieldBenchmark { diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ViktorBenchmark.kt b/examples/src/benchmarks/kotlin/kscience/kmath/structures/ViktorBenchmark.kt similarity index 89% rename from examples/src/benchmarks/kotlin/scientifik/kmath/structures/ViktorBenchmark.kt rename to examples/src/benchmarks/kotlin/kscience/kmath/structures/ViktorBenchmark.kt index 9627743c9..a4b831f7c 100644 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ViktorBenchmark.kt +++ b/examples/src/benchmarks/kotlin/kscience/kmath/structures/ViktorBenchmark.kt @@ -1,12 +1,12 @@ -package scientifik.kmath.structures +package kscience.kmath.structures +import kscience.kmath.operations.RealField +import kscience.kmath.operations.invoke +import kscience.kmath.viktor.ViktorNDField import org.jetbrains.bio.viktor.F64Array import org.openjdk.jmh.annotations.Benchmark import org.openjdk.jmh.annotations.Scope import org.openjdk.jmh.annotations.State -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke -import scientifik.kmath.viktor.ViktorNDField @State(Scope.Benchmark) class ViktorBenchmark { diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/utils/utils.kt b/examples/src/benchmarks/kotlin/kscience/kmath/utils/utils.kt similarity index 91% rename from examples/src/benchmarks/kotlin/scientifik/kmath/utils/utils.kt rename to examples/src/benchmarks/kotlin/kscience/kmath/utils/utils.kt index 3b0d56291..329b7b17b 100644 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/utils/utils.kt +++ b/examples/src/benchmarks/kotlin/kscience/kmath/utils/utils.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.utils +package kscience.kmath.utils import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt b/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt deleted file mode 100644 index 2ccb27871..000000000 --- a/examples/src/benchmarks/kotlin/scientifik/kmath/structures/ArrayBenchmark.kt +++ /dev/null @@ -1,37 +0,0 @@ -package scientifik.kmath.structures - -import org.openjdk.jmh.annotations.Benchmark -import org.openjdk.jmh.annotations.Scope -import org.openjdk.jmh.annotations.State -import java.nio.IntBuffer - -@State(Scope.Benchmark) -class ArrayBenchmark { - @Benchmark - fun benchmarkArrayRead() { - var res = 0 - for (i in 1..size) res += array[size - i] - } - - @Benchmark - fun benchmarkBufferRead() { - var res = 0 - for (i in 1..size) res += arrayBuffer.get(size - i) - } - - @Benchmark - fun nativeBufferRead() { - var res = 0 - for (i in 1..size) res += nativeBuffer.get(size - i) - } - - companion object { - const val size: Int = 1000 - val array: IntArray = IntArray(size) { it } - val arrayBuffer: IntBuffer = IntBuffer.wrap(array) - - val nativeBuffer: IntBuffer = IntBuffer.allocate(size).also { - for (i in 0 until size) it.put(i, i) - } - } -} diff --git a/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt b/examples/src/main/kotlin/kscience/kmath/ast/ExpressionsInterpretersBenchmark.kt similarity index 82% rename from examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt rename to examples/src/main/kotlin/kscience/kmath/ast/ExpressionsInterpretersBenchmark.kt index 80e70d149..a5768f1f5 100644 --- a/examples/src/main/kotlin/scientifik/kmath/ast/ExpressionsInterpretersBenchmark.kt +++ b/examples/src/main/kotlin/kscience/kmath/ast/ExpressionsInterpretersBenchmark.kt @@ -1,11 +1,11 @@ -//package scientifik.kmath.ast +//package kscience.kmath.ast // -//import scientifik.kmath.asm.compile -//import scientifik.kmath.expressions.Expression -//import scientifik.kmath.expressions.expressionInField -//import scientifik.kmath.expressions.invoke -//import scientifik.kmath.operations.Field -//import scientifik.kmath.operations.RealField +//import kscience.kmath.asm.compile +//import kscience.kmath.expressions.Expression +//import kscience.kmath.expressions.expressionInField +//import kscience.kmath.expressions.invoke +//import kscience.kmath.operations.Field +//import kscience.kmath.operations.RealField //import kotlin.random.Random //import kotlin.system.measureTimeMillis // diff --git a/examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionBenchmark.kt b/examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt similarity index 94% rename from examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionBenchmark.kt rename to examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt index b060cddb6..57a9c55c5 100644 --- a/examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionBenchmark.kt +++ b/examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionBenchmark.kt @@ -1,12 +1,12 @@ -package scientifik.kmath.commons.prob +package kscience.kmath.commons.prob import kotlinx.coroutines.Dispatchers import kotlinx.coroutines.async import kotlinx.coroutines.runBlocking +import kscience.kmath.chains.BlockingRealChain +import kscience.kmath.prob.* import org.apache.commons.rng.sampling.distribution.ZigguratNormalizedGaussianSampler import org.apache.commons.rng.simple.RandomSource -import scientifik.kmath.chains.BlockingRealChain -import scientifik.kmath.prob.* import java.time.Duration import java.time.Instant diff --git a/examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionDemo.kt b/examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt similarity index 72% rename from examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionDemo.kt rename to examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt index e059415dc..dbb51267b 100644 --- a/examples/src/main/kotlin/scientifik/kmath/commons/prob/DistributionDemo.kt +++ b/examples/src/main/kotlin/kscience/kmath/commons/prob/DistributionDemo.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.commons.prob +package kscience.kmath.commons.prob import kotlinx.coroutines.runBlocking -import scientifik.kmath.chains.Chain -import scientifik.kmath.chains.collectWithState -import scientifik.kmath.prob.Distribution -import scientifik.kmath.prob.RandomGenerator -import scientifik.kmath.prob.normal +import kscience.kmath.chains.Chain +import kscience.kmath.chains.collectWithState +import kscience.kmath.prob.Distribution +import kscience.kmath.prob.RandomGenerator +import kscience.kmath.prob.normal data class AveragingChainState(var num: Int = 0, var value: Double = 0.0) diff --git a/examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt b/examples/src/main/kotlin/kscience/kmath/operations/BigIntDemo.kt similarity index 72% rename from examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt rename to examples/src/main/kotlin/kscience/kmath/operations/BigIntDemo.kt index 10b038943..692ea6d8c 100644 --- a/examples/src/main/kotlin/scientifik/kmath/operations/BigIntDemo.kt +++ b/examples/src/main/kotlin/kscience/kmath/operations/BigIntDemo.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations fun main() { val res = BigIntField { diff --git a/examples/src/main/kotlin/scientifik/kmath/operations/ComplexDemo.kt b/examples/src/main/kotlin/kscience/kmath/operations/ComplexDemo.kt similarity index 68% rename from examples/src/main/kotlin/scientifik/kmath/operations/ComplexDemo.kt rename to examples/src/main/kotlin/kscience/kmath/operations/ComplexDemo.kt index 6dbfebce1..3c97940a8 100644 --- a/examples/src/main/kotlin/scientifik/kmath/operations/ComplexDemo.kt +++ b/examples/src/main/kotlin/kscience/kmath/operations/ComplexDemo.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.structures.NDElement -import scientifik.kmath.structures.NDField -import scientifik.kmath.structures.complex +import kscience.kmath.structures.NDElement +import kscience.kmath.structures.NDField +import kscience.kmath.structures.complex fun main() { val element = NDElement.complex(2, 2) { index: IntArray -> diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/ComplexND.kt b/examples/src/main/kotlin/kscience/kmath/structures/ComplexND.kt similarity index 85% rename from examples/src/main/kotlin/scientifik/kmath/structures/ComplexND.kt rename to examples/src/main/kotlin/kscience/kmath/structures/ComplexND.kt index 2329f3fc3..aa4b10ef2 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/ComplexND.kt +++ b/examples/src/main/kotlin/kscience/kmath/structures/ComplexND.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.linear.transpose -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.ComplexField -import scientifik.kmath.operations.invoke +import kscience.kmath.linear.transpose +import kscience.kmath.operations.Complex +import kscience.kmath.operations.ComplexField +import kscience.kmath.operations.invoke import kotlin.system.measureTimeMillis fun main() { diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt b/examples/src/main/kotlin/kscience/kmath/structures/NDField.kt similarity index 93% rename from examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt rename to examples/src/main/kotlin/kscience/kmath/structures/NDField.kt index 54ffcb67c..28bfab779 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/NDField.kt +++ b/examples/src/main/kotlin/kscience/kmath/structures/NDField.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlinx.coroutines.GlobalScope -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.RealField +import kscience.kmath.operations.invoke import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.system.measureTimeMillis diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt b/examples/src/main/kotlin/kscience/kmath/structures/StructureReadBenchmark.kt similarity index 96% rename from examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt rename to examples/src/main/kotlin/kscience/kmath/structures/StructureReadBenchmark.kt index d5998cd0a..a2bfea2f9 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/StructureReadBenchmark.kt +++ b/examples/src/main/kotlin/kscience/kmath/structures/StructureReadBenchmark.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlin.system.measureTimeMillis diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt b/examples/src/main/kotlin/kscience/kmath/structures/StructureWriteBenchmark.kt similarity index 96% rename from examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt rename to examples/src/main/kotlin/kscience/kmath/structures/StructureWriteBenchmark.kt index ffcecbce2..b2975393f 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/StructureWriteBenchmark.kt +++ b/examples/src/main/kotlin/kscience/kmath/structures/StructureWriteBenchmark.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlin.system.measureTimeMillis diff --git a/examples/src/main/kotlin/scientifik/kmath/structures/typeSafeDimensions.kt b/examples/src/main/kotlin/kscience/kmath/structures/typeSafeDimensions.kt similarity index 71% rename from examples/src/main/kotlin/scientifik/kmath/structures/typeSafeDimensions.kt rename to examples/src/main/kotlin/kscience/kmath/structures/typeSafeDimensions.kt index 5d323823a..bf83a9f05 100644 --- a/examples/src/main/kotlin/scientifik/kmath/structures/typeSafeDimensions.kt +++ b/examples/src/main/kotlin/kscience/kmath/structures/typeSafeDimensions.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.dimensions.D2 -import scientifik.kmath.dimensions.D3 -import scientifik.kmath.dimensions.DMatrixContext -import scientifik.kmath.dimensions.Dimension -import scientifik.kmath.operations.RealField +import kscience.kmath.dimensions.D2 +import kscience.kmath.dimensions.D3 +import kscience.kmath.dimensions.DMatrixContext +import kscience.kmath.dimensions.Dimension +import kscience.kmath.operations.RealField fun DMatrixContext.simple() { val m1 = produce { i, j -> (i + j).toDouble() } diff --git a/kmath-ast/README.md b/kmath-ast/README.md index 2339d0426..043224800 100644 --- a/kmath-ast/README.md +++ b/kmath-ast/README.md @@ -8,32 +8,32 @@ This subproject implements the following features: - Evaluating expressions by traversing MST. > #### Artifact: -> This module is distributed in the artifact `scientifik:kmath-ast:0.1.4-dev-8`. +> This module is distributed in the artifact `kscience.kmath:kmath-ast:0.1.4-dev-8`. > > **Gradle:** > > ```gradle > repositories { -> maven { url 'https://dl.bintray.com/mipt-npm/scientifik' } +> maven { url 'https://dl.bintray.com/mipt-npm/kscience' } > maven { url 'https://dl.bintray.com/mipt-npm/dev' } > maven { url https://dl.bintray.com/hotkeytlt/maven' } > } > > dependencies { -> implementation 'scientifik:kmath-ast:0.1.4-dev-8' +> implementation 'kscience.kmath:kmath-ast:0.1.4-dev-8' > } > ``` > **Gradle Kotlin DSL:** > > ```kotlin > repositories { -> maven("https://dl.bintray.com/mipt-npm/scientifik") +> maven("https://dl.bintray.com/mipt-npm/kscience") > maven("https://dl.bintray.com/mipt-npm/dev") > maven("https://dl.bintray.com/hotkeytlt/maven") > } > > dependencies { -> implementation("scientifik:kmath-ast:0.1.4-dev-8") +> implementation("kscience.kmath:kmath-ast:0.1.4-dev-8") > } > ``` > @@ -52,12 +52,12 @@ RealField.mstInField { symbol("x") + 2 }.compile() … leads to generation of bytecode, which can be decompiled to the following Java class: ```java -package scientifik.kmath.asm.generated; +package kscience.kmath.asm.generated; import java.util.Map; -import scientifik.kmath.asm.internal.MapIntrinsics; -import scientifik.kmath.expressions.Expression; -import scientifik.kmath.operations.RealField; +import kscience.kmath.asm.internal.MapIntrinsics; +import kscience.kmath.expressions.Expression; +import kscience.kmath.operations.RealField; public final class AsmCompiledExpression_1073786867_0 implements Expression { private final RealField algebra; diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MST.kt similarity index 94% rename from kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt rename to kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MST.kt index 283a20649..f312323b9 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MST.kt +++ b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MST.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.ast +package kscience.kmath.ast -import scientifik.kmath.operations.Algebra -import scientifik.kmath.operations.NumericAlgebra -import scientifik.kmath.operations.RealField +import kscience.kmath.operations.Algebra +import kscience.kmath.operations.NumericAlgebra +import kscience.kmath.operations.RealField /** * A Mathematical Syntax Tree node for mathematical expressions. diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstAlgebra.kt similarity index 98% rename from kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt rename to kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstAlgebra.kt index 8cee0ea0b..64a820b20 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstAlgebra.kt +++ b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstAlgebra.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.ast +package kscience.kmath.ast -import scientifik.kmath.operations.* +import kscience.kmath.operations.* /** * [Algebra] over [MST] nodes. diff --git a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstExpression.kt similarity index 97% rename from kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt rename to kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstExpression.kt index d094e2fee..483bc530c 100644 --- a/kmath-ast/src/commonMain/kotlin/scientifik/kmath/ast/MstExpression.kt +++ b/kmath-ast/src/commonMain/kotlin/kscience/kmath/ast/MstExpression.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.ast +package kscience.kmath.ast -import scientifik.kmath.expressions.* -import scientifik.kmath.operations.* +import kscience.kmath.expressions.* +import kscience.kmath.operations.* import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt similarity index 83% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt index 3ca817b63..edfe7f01d 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/asm.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt @@ -1,13 +1,13 @@ -package scientifik.kmath.asm +package kscience.kmath.asm -import scientifik.kmath.asm.internal.AsmBuilder -import scientifik.kmath.asm.internal.MstType -import scientifik.kmath.asm.internal.buildAlgebraOperationCall -import scientifik.kmath.asm.internal.buildName -import scientifik.kmath.ast.MST -import scientifik.kmath.ast.MstExpression -import scientifik.kmath.expressions.Expression -import scientifik.kmath.operations.Algebra +import kscience.kmath.asm.internal.AsmBuilder +import kscience.kmath.asm.internal.MstType +import kscience.kmath.asm.internal.buildAlgebraOperationCall +import kscience.kmath.asm.internal.buildName +import kscience.kmath.ast.MST +import kscience.kmath.ast.MstExpression +import kscience.kmath.expressions.Expression +import kscience.kmath.operations.Algebra import kotlin.reflect.KClass /** diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/AsmBuilder.kt similarity index 98% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/AsmBuilder.kt index 1cf49a251..ab2de97aa 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/AsmBuilder.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/AsmBuilder.kt @@ -1,13 +1,13 @@ -package scientifik.kmath.asm.internal +package kscience.kmath.asm.internal +import kscience.kmath.asm.internal.AsmBuilder.ClassLoader +import kscience.kmath.ast.MST +import kscience.kmath.expressions.Expression +import kscience.kmath.operations.Algebra +import kscience.kmath.operations.NumericAlgebra import org.objectweb.asm.* import org.objectweb.asm.Opcodes.* import org.objectweb.asm.commons.InstructionAdapter -import scientifik.kmath.asm.internal.AsmBuilder.ClassLoader -import scientifik.kmath.ast.MST -import scientifik.kmath.expressions.Expression -import scientifik.kmath.operations.Algebra -import scientifik.kmath.operations.NumericAlgebra import java.util.* import java.util.stream.Collectors import kotlin.reflect.KClass @@ -564,6 +564,6 @@ internal class AsmBuilder internal constructor( /** * ASM type for MapIntrinsics. */ - internal val MAP_INTRINSICS_TYPE: Type by lazy { Type.getObjectType("scientifik/kmath/asm/internal/MapIntrinsics") } + internal val MAP_INTRINSICS_TYPE: Type by lazy { Type.getObjectType("kscience/kmath/asm/internal/MapIntrinsics") } } } diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/MstType.kt similarity index 81% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/MstType.kt index 81e6791c1..526c27305 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/MstType.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/MstType.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.asm.internal +package kscience.kmath.asm.internal -import scientifik.kmath.ast.MST +import kscience.kmath.ast.MST /** * Represents types known in [MST], numbers and general values. diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/codegenUtils.kt similarity index 94% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/codegenUtils.kt index ab29d3614..67fce40ac 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/codegenUtils.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/codegenUtils.kt @@ -1,14 +1,14 @@ -package scientifik.kmath.asm.internal +package kscience.kmath.asm.internal +import kscience.kmath.ast.MST +import kscience.kmath.expressions.Expression +import kscience.kmath.operations.Algebra +import kscience.kmath.operations.FieldOperations +import kscience.kmath.operations.RingOperations +import kscience.kmath.operations.SpaceOperations import org.objectweb.asm.* import org.objectweb.asm.Opcodes.INVOKEVIRTUAL import org.objectweb.asm.commons.InstructionAdapter -import scientifik.kmath.ast.MST -import scientifik.kmath.expressions.Expression -import scientifik.kmath.operations.Algebra -import scientifik.kmath.operations.FieldOperations -import scientifik.kmath.operations.RingOperations -import scientifik.kmath.operations.SpaceOperations import java.lang.reflect.Method import kotlin.contracts.InvocationKind import kotlin.contracts.contract @@ -76,7 +76,7 @@ internal fun MethodVisitor.label(): Label = Label().also { visitLabel(it) } * @author Iaroslav Postovalov */ internal tailrec fun buildName(mst: MST, collision: Int = 0): String { - val name = "scientifik.kmath.asm.generated.AsmCompiledExpression_${mst.hashCode()}_$collision" + val name = "kscience.kmath.asm.generated.AsmCompiledExpression_${mst.hashCode()}_$collision" try { Class.forName(name) diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/mapIntrinsics.kt similarity index 89% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/mapIntrinsics.kt index 997dbbfe5..708b3c2b4 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/asm/internal/mapIntrinsics.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/internal/mapIntrinsics.kt @@ -1,6 +1,6 @@ @file:JvmName("MapIntrinsics") -package scientifik.kmath.asm.internal +package kscience.kmath.asm.internal /** * Gets value with given [key] or throws [IllegalStateException] whenever it is not present. diff --git a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/ast/parser.kt similarity index 93% rename from kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt rename to kmath-ast/src/jvmMain/kotlin/kscience/kmath/ast/parser.kt index 8ccbf4606..15e6625db 100644 --- a/kmath-ast/src/jvmMain/kotlin/scientifik/kmath/ast/parser.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/ast/parser.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.ast +package kscience.kmath.ast import com.github.h0tk3y.betterParse.combinators.* import com.github.h0tk3y.betterParse.grammar.Grammar @@ -10,10 +10,10 @@ import com.github.h0tk3y.betterParse.lexer.TokenMatch import com.github.h0tk3y.betterParse.lexer.regexToken import com.github.h0tk3y.betterParse.parser.ParseResult import com.github.h0tk3y.betterParse.parser.Parser -import scientifik.kmath.operations.FieldOperations -import scientifik.kmath.operations.PowerOperations -import scientifik.kmath.operations.RingOperations -import scientifik.kmath.operations.SpaceOperations +import kscience.kmath.operations.FieldOperations +import kscience.kmath.operations.PowerOperations +import kscience.kmath.operations.RingOperations +import kscience.kmath.operations.SpaceOperations /** * TODO move to common after IR version is released diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmAlgebras.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmAlgebras.kt index 3acc6eb28..5d8f90c9b 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmAlgebras.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmAlgebras.kt @@ -1,12 +1,12 @@ package scietifik.kmath.asm -import scientifik.kmath.asm.compile -import scientifik.kmath.ast.mstInField -import scientifik.kmath.ast.mstInRing -import scientifik.kmath.ast.mstInSpace -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.ByteRing -import scientifik.kmath.operations.RealField +import kscience.kmath.asm.compile +import kscience.kmath.ast.mstInField +import kscience.kmath.ast.mstInRing +import kscience.kmath.ast.mstInSpace +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.ByteRing +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmExpressions.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmExpressions.kt index 36c254c38..c2e45b8ff 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmExpressions.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmExpressions.kt @@ -1,10 +1,10 @@ package scietifik.kmath.asm -import scientifik.kmath.asm.compile -import scientifik.kmath.ast.mstInField -import scientifik.kmath.ast.mstInSpace -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.RealField +import kscience.kmath.asm.compile +import kscience.kmath.ast.mstInField +import kscience.kmath.ast.mstInSpace +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmSpecialization.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmSpecialization.kt index a88431e9d..2b27fdc0f 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmSpecialization.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmSpecialization.kt @@ -1,9 +1,9 @@ package scietifik.kmath.asm -import scientifik.kmath.asm.compile -import scientifik.kmath.ast.mstInField -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.RealField +import kscience.kmath.asm.compile +import kscience.kmath.ast.mstInField +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmVariables.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmVariables.kt index aafc75448..3511be97c 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmVariables.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/asm/TestAsmVariables.kt @@ -1,8 +1,8 @@ package scietifik.kmath.asm -import scientifik.kmath.ast.mstInRing -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.ByteRing +import kscience.kmath.ast.mstInRing +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.ByteRing import kotlin.test.Test import kotlin.test.assertEquals import kotlin.test.assertFailsWith diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/AsmTest.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/AsmTest.kt index 75659cc35..bb371bed0 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/AsmTest.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/AsmTest.kt @@ -1,12 +1,12 @@ package scietifik.kmath.ast -import scientifik.kmath.asm.compile -import scientifik.kmath.asm.expression -import scientifik.kmath.ast.mstInField -import scientifik.kmath.ast.parseMath -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.ComplexField +import kscience.kmath.asm.compile +import kscience.kmath.asm.expression +import kscience.kmath.ast.mstInField +import kscience.kmath.ast.parseMath +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.Complex +import kscience.kmath.operations.ComplexField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserPrecedenceTest.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserPrecedenceTest.kt index 9bdbb12c9..21ee47d13 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserPrecedenceTest.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserPrecedenceTest.kt @@ -1,9 +1,9 @@ package scietifik.kmath.ast -import scientifik.kmath.ast.evaluate -import scientifik.kmath.ast.parseMath -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.RealField +import kscience.kmath.ast.evaluate +import kscience.kmath.ast.parseMath +import kscience.kmath.operations.Field +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserTest.kt b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserTest.kt index 9179c3428..8a5d6ba48 100644 --- a/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserTest.kt +++ b/kmath-ast/src/jvmTest/kotlin/scietifik/kmath/ast/ParserTest.kt @@ -1,13 +1,13 @@ package scietifik.kmath.ast -import scientifik.kmath.ast.evaluate -import scientifik.kmath.ast.mstInField -import scientifik.kmath.ast.parseMath -import scientifik.kmath.expressions.invoke -import scientifik.kmath.operations.Algebra -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.ComplexField -import scientifik.kmath.operations.RealField +import kscience.kmath.ast.evaluate +import kscience.kmath.ast.mstInField +import kscience.kmath.ast.parseMath +import kscience.kmath.expressions.invoke +import kscience.kmath.operations.Algebra +import kscience.kmath.operations.Complex +import kscience.kmath.operations.ComplexField +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt b/kmath-commons/src/main/kotlin/kscience/kmath/commons/expressions/DiffExpression.kt similarity index 95% rename from kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt rename to kmath-commons/src/main/kotlin/kscience/kmath/commons/expressions/DiffExpression.kt index d556eb762..3ac908536 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/expressions/DiffExpression.kt +++ b/kmath-commons/src/main/kotlin/kscience/kmath/commons/expressions/DiffExpression.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.commons.expressions +package kscience.kmath.commons.expressions +import kscience.kmath.expressions.Expression +import kscience.kmath.expressions.ExpressionAlgebra +import kscience.kmath.operations.ExtendedField +import kscience.kmath.operations.Field +import kscience.kmath.operations.invoke import org.apache.commons.math3.analysis.differentiation.DerivativeStructure -import scientifik.kmath.expressions.Expression -import scientifik.kmath.expressions.ExpressionAlgebra -import scientifik.kmath.operations.ExtendedField -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.invoke import kotlin.properties.ReadOnlyProperty /** diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt b/kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMMatrix.kt similarity index 95% rename from kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt rename to kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMMatrix.kt index 72288a85e..377d167bc 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMMatrix.kt +++ b/kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMMatrix.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.commons.linear +package kscience.kmath.commons.linear +import kscience.kmath.linear.* +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.NDStructure import org.apache.commons.math3.linear.* -import scientifik.kmath.linear.* -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.NDStructure public class CMMatrix(public val origin: RealMatrix, features: Set? = null) : FeaturedMatrix { diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt b/kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMSolver.kt similarity index 91% rename from kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt rename to kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMSolver.kt index 1e79aff21..210014e1a 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/linear/CMSolver.kt +++ b/kmath-commons/src/main/kotlin/kscience/kmath/commons/linear/CMSolver.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.commons.linear +package kscience.kmath.commons.linear +import kscience.kmath.linear.Point +import kscience.kmath.structures.Matrix import org.apache.commons.math3.linear.* -import scientifik.kmath.linear.Point -import scientifik.kmath.structures.Matrix public enum class CMDecomposition { LUP, diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt b/kmath-commons/src/main/kotlin/kscience/kmath/commons/random/CMRandomGeneratorWrapper.kt similarity index 92% rename from kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt rename to kmath-commons/src/main/kotlin/kscience/kmath/commons/random/CMRandomGeneratorWrapper.kt index 3e60d7cdd..58609deae 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/random/CMRandomGeneratorWrapper.kt +++ b/kmath-commons/src/main/kotlin/kscience/kmath/commons/random/CMRandomGeneratorWrapper.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.commons.random +package kscience.kmath.commons.random -import scientifik.kmath.prob.RandomGenerator +import kscience.kmath.prob.RandomGenerator public class CMRandomGeneratorWrapper(public val factory: (IntArray) -> RandomGenerator) : org.apache.commons.math3.random.RandomGenerator { diff --git a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt b/kmath-commons/src/main/kotlin/kscience/kmath/commons/transform/Transformations.kt similarity index 94% rename from kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt rename to kmath-commons/src/main/kotlin/kscience/kmath/commons/transform/Transformations.kt index 4af0d2b72..cd2896be6 100644 --- a/kmath-commons/src/main/kotlin/scientifik/kmath/commons/transform/Transformations.kt +++ b/kmath-commons/src/main/kotlin/kscience/kmath/commons/transform/Transformations.kt @@ -1,13 +1,13 @@ -package scientifik.kmath.commons.transform +package kscience.kmath.commons.transform import kotlinx.coroutines.FlowPreview import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.map +import kscience.kmath.operations.Complex +import kscience.kmath.streaming.chunked +import kscience.kmath.streaming.spread +import kscience.kmath.structures.* import org.apache.commons.math3.transform.* -import scientifik.kmath.operations.Complex -import scientifik.kmath.streaming.chunked -import scientifik.kmath.streaming.spread -import scientifik.kmath.structures.* /** diff --git a/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt b/kmath-commons/src/test/kotlin/kscience/kmath/commons/expressions/AutoDiffTest.kt similarity index 92% rename from kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt rename to kmath-commons/src/test/kotlin/kscience/kmath/commons/expressions/AutoDiffTest.kt index 3d8a1d5f0..f905e6818 100644 --- a/kmath-commons/src/test/kotlin/scientifik/kmath/commons/expressions/AutoDiffTest.kt +++ b/kmath-commons/src/test/kotlin/kscience/kmath/commons/expressions/AutoDiffTest.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.commons.expressions +package kscience.kmath.commons.expressions -import scientifik.kmath.expressions.invoke +import kscience.kmath.expressions.invoke import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.test.Test diff --git a/kmath-core/README.md b/kmath-core/README.md index aed33a257..9d05331f9 100644 --- a/kmath-core/README.md +++ b/kmath-core/README.md @@ -10,31 +10,31 @@ The core features of KMath: - Automatic differentiation. > #### Artifact: -> This module is distributed in the artifact `scientifik:kmath-core:0.1.4-dev-8`. +> This module is distributed in the artifact `kscience.kmath:kmath-core:0.1.4-dev-8`. > > **Gradle:** > > ```gradle > repositories { -> maven { url 'https://dl.bintray.com/mipt-npm/scientifik' } +> maven { url 'https://dl.bintray.com/mipt-npm/kscience' } > maven { url 'https://dl.bintray.com/mipt-npm/dev' } > maven { url https://dl.bintray.com/hotkeytlt/maven' } > } > > dependencies { -> implementation 'scientifik:kmath-core:0.1.4-dev-8' +> implementation 'kscience.kmath:kmath-core:0.1.4-dev-8' > } > ``` > **Gradle Kotlin DSL:** > > ```kotlin > repositories { -> maven("https://dl.bintray.com/mipt-npm/scientifik") +> maven("https://dl.bintray.com/mipt-npm/kscience") > maven("https://dl.bintray.com/mipt-npm/dev") > maven("https://dl.bintray.com/hotkeytlt/maven") > } > -> dependencies {`` -> implementation("scientifik:kmath-core:0.1.4-dev-8") +> dependencies { +> implementation("kscience.kmath:kmath-core:0.1.4-dev-8") > } > ``` diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/Domain.kt similarity index 83% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/domains/Domain.kt index c4c823bf2..5c3cff2c5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/Domain.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/Domain.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.domains +package kscience.kmath.domains -import scientifik.kmath.linear.Point +import kscience.kmath.linear.Point /** * A simple geometric domain. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/HyperSquareDomain.kt similarity index 92% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/domains/HyperSquareDomain.kt index 61d443ff3..b45cf6bf5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/HyperSquareDomain.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/HyperSquareDomain.kt @@ -13,11 +13,11 @@ * See the License for the specific language governing permissions and * limitations under the License. */ -package scientifik.kmath.domains +package kscience.kmath.domains -import scientifik.kmath.linear.Point -import scientifik.kmath.structures.RealBuffer -import scientifik.kmath.structures.indices +import kscience.kmath.linear.Point +import kscience.kmath.structures.RealBuffer +import kscience.kmath.structures.indices /** * diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/RealDomain.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/domains/RealDomain.kt index b1da63519..369b093bb 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/RealDomain.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/RealDomain.kt @@ -13,9 +13,9 @@ * See the License for the specific language governing permissions and * limitations under the License. */ -package scientifik.kmath.domains +package kscience.kmath.domains -import scientifik.kmath.linear.Point +import kscience.kmath.linear.Point /** * n-dimensional volume diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnconstrainedDomain.kt similarity index 94% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnconstrainedDomain.kt index c637795df..e2efb51ab 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnconstrainedDomain.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnconstrainedDomain.kt @@ -13,9 +13,9 @@ * See the License for the specific language governing permissions and * limitations under the License. */ -package scientifik.kmath.domains +package kscience.kmath.domains -import scientifik.kmath.linear.Point +import kscience.kmath.linear.Point public class UnconstrainedDomain(public override val dimension: Int) : RealDomain { public override operator fun contains(point: Point): Boolean = true diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnivariateDomain.kt similarity index 92% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnivariateDomain.kt index 066a8ae25..bf090f2e5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/domains/UnivariateDomain.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/domains/UnivariateDomain.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.domains +package kscience.kmath.domains -import scientifik.kmath.linear.Point -import scientifik.kmath.structures.asBuffer +import kscience.kmath.linear.Point +import kscience.kmath.structures.asBuffer public inline class UnivariateDomain(public val range: ClosedFloatingPointRange) : RealDomain { public override val dimension: Int diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/Expression.kt similarity index 92% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/Expression.kt index a21735f27..5ade9e3ca 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/Expression.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/Expression.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.expressions +package kscience.kmath.expressions -import scientifik.kmath.operations.Algebra +import kscience.kmath.operations.Algebra /** * An elementary function that could be invoked on a map of arguments diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/FunctionalExpressionAlgebra.kt similarity index 99% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/FunctionalExpressionAlgebra.kt index 3804819e6..49844a2be 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/FunctionalExpressionAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/FunctionalExpressionAlgebra.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.expressions +package kscience.kmath.expressions -import scientifik.kmath.operations.* +import kscience.kmath.operations.* internal class FunctionalUnaryOperation(val context: Algebra, val name: String, private val expr: Expression) : Expression { diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/expressionBuilders.kt similarity index 86% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/expressionBuilders.kt index 3af24b595..1702a5921 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/expressions/expressionBuilders.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/expressions/expressionBuilders.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.expressions +package kscience.kmath.expressions -import scientifik.kmath.operations.ExtendedField -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.Space +import kscience.kmath.operations.ExtendedField +import kscience.kmath.operations.Field +import kscience.kmath.operations.Ring +import kscience.kmath.operations.Space import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/BufferMatrix.kt similarity index 96% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/BufferMatrix.kt index d053f016c..d51f40890 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/BufferMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/BufferMatrix.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.Ring -import scientifik.kmath.structures.* +import kscience.kmath.operations.RealField +import kscience.kmath.operations.Ring +import kscience.kmath.structures.* /** * Basic implementation of Matrix space based on [NDStructure] diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/FeaturedMatrix.kt similarity index 92% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/FeaturedMatrix.kt index d5f8f8e20..65dc8df76 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/FeaturedMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/FeaturedMatrix.kt @@ -1,10 +1,9 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.Ring -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.Structure2D -import scientifik.kmath.structures.asBuffer -import kotlin.contracts.contract +import kscience.kmath.operations.Ring +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.Structure2D +import kscience.kmath.structures.asBuffer import kotlin.math.sqrt /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LUPDecomposition.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LUPDecomposition.kt index ab23afff0..bb80bcafd 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LUPDecomposition.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LUPDecomposition.kt @@ -1,13 +1,12 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.BufferAccessor2D -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.Structure2D -import kotlin.contracts.contract +import kscience.kmath.operations.Field +import kscience.kmath.operations.RealField +import kscience.kmath.operations.Ring +import kscience.kmath.operations.invoke +import kscience.kmath.structures.BufferAccessor2D +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.Structure2D import kotlin.reflect.KClass /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LinearAlgebra.kt similarity index 82% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LinearAlgebra.kt index 607d63bb1..034decc2f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/LinearAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/LinearAlgebra.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.VirtualBuffer +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.VirtualBuffer public typealias Point = Buffer diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixBuilder.kt similarity index 87% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixBuilder.kt index 5efa53bc2..91c1ec824 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixBuilder.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixBuilder.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.BufferFactory -import scientifik.kmath.structures.Structure2D -import scientifik.kmath.structures.asBuffer +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.BufferFactory +import kscience.kmath.structures.Structure2D +import kscience.kmath.structures.asBuffer public class MatrixBuilder(public val rows: Int, public val columns: Int) { public operator fun invoke(vararg elements: T): FeaturedMatrix { diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt similarity index 90% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt index 13d4e68b9..d66530472 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixContext.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixContext.kt @@ -1,13 +1,13 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.SpaceOperations -import scientifik.kmath.operations.invoke -import scientifik.kmath.operations.sum -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.BufferFactory -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.asSequence +import kscience.kmath.operations.Ring +import kscience.kmath.operations.SpaceOperations +import kscience.kmath.operations.invoke +import kscience.kmath.operations.sum +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.BufferFactory +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.asSequence /** * Basic operations on matrices. Operates on [Matrix] diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixFeatures.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixFeatures.kt index 3448a2e7c..a82032e50 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/MatrixFeatures.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/MatrixFeatures.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.linear +package kscience.kmath.linear /** * A marker interface representing some matrix feature like diagonal, sparse, zero, etc. Features used to optimize matrix diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VectorSpace.kt similarity index 89% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VectorSpace.kt index a75523f7c..67056c6b2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VectorSpace.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VectorSpace.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.BufferFactory +import kscience.kmath.operations.RealField +import kscience.kmath.operations.Space +import kscience.kmath.operations.invoke +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.BufferFactory /** * A linear space for vectors. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VirtualMatrix.kt similarity index 96% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VirtualMatrix.kt index f6794ce01..e0a1d0026 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/linear/VirtualMatrix.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/linear/VirtualMatrix.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.structures.Matrix +import kscience.kmath.structures.Matrix public class VirtualMatrix( override val rowNum: Int, diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt index b09bcff9f..b4a610eb1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/AutoDiff.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.misc +package kscience.kmath.misc -import scientifik.kmath.linear.Point -import scientifik.kmath.operations.ExtendedField -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.invoke -import scientifik.kmath.operations.sum -import scientifik.kmath.structures.asBuffer +import kscience.kmath.linear.Point +import kscience.kmath.operations.ExtendedField +import kscience.kmath.operations.Field +import kscience.kmath.operations.invoke +import kscience.kmath.operations.sum +import kscience.kmath.structures.asBuffer import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/Grids.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/misc/Grids.kt index cf3e93895..4d058c366 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/Grids.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/Grids.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.misc +package kscience.kmath.misc import kotlin.math.abs diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/cumulative.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/misc/cumulative.kt index 1712fef58..72d2f2388 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/misc/cumulative.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/misc/cumulative.kt @@ -1,8 +1,7 @@ -package scientifik.kmath.misc +package kscience.kmath.misc -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke -import kotlin.contracts.contract +import kscience.kmath.operations.Space +import kscience.kmath.operations.invoke import kotlin.jvm.JvmName /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt similarity index 99% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt index 1ea105f67..12a45615a 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Algebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.operations - -import kotlin.contracts.contract +package kscience.kmath.operations /** * Stub for DSL the [Algebra] is. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraElements.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraElements.kt index 4ed1be0ee..94328dcb5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraElements.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraElements.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations /** * The generic mathematics elements which is able to store its context diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraExtensions.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraExtensions.kt index 1020df7d9..657da6b4e 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/AlgebraExtensions.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/AlgebraExtensions.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations /** * Returns the sum of all elements in the iterable in this [Space]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/BigInt.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/BigInt.kt index d54557a1f..4590c58fc 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/BigInt.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/BigInt.kt @@ -1,9 +1,8 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.operations.BigInt.Companion.BASE -import scientifik.kmath.operations.BigInt.Companion.BASE_SIZE -import scientifik.kmath.structures.* -import kotlin.contracts.contract +import kscience.kmath.operations.BigInt.Companion.BASE +import kscience.kmath.operations.BigInt.Companion.BASE_SIZE +import kscience.kmath.structures.* import kotlin.math.log2 import kotlin.math.max import kotlin.math.min diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Complex.kt similarity index 94% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Complex.kt index 05a592e97..c0faf5dc5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/Complex.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Complex.kt @@ -1,12 +1,11 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.MemoryBuffer -import scientifik.kmath.structures.MutableBuffer -import scientifik.memory.MemoryReader -import scientifik.memory.MemorySpec -import scientifik.memory.MemoryWriter -import kotlin.contracts.contract +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.MemoryBuffer +import kscience.kmath.structures.MutableBuffer +import kscience.memory.MemoryReader +import kscience.memory.MemorySpec +import kscience.memory.MemoryWriter import kotlin.math.* /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/NumberAlgebra.kt similarity index 99% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/NumberAlgebra.kt index 150a0d582..a2b33a0c4 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/NumberAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/NumberAlgebra.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import kotlin.math.abs import kotlin.math.pow as kpow diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/OptionalOperations.kt similarity index 99% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/operations/OptionalOperations.kt index 101f62293..f31d61ae1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/operations/OptionalOperations.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/operations/OptionalOperations.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations /** * A container for trigonometric operations for specific type. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDField.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDField.kt index a258c7a2f..c3c859f7a 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDField.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDField.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.FieldElement +import kscience.kmath.operations.Field +import kscience.kmath.operations.FieldElement public class BoxingNDField>( public override val shape: IntArray, diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDRing.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDRing.kt index de83768a0..461b0387c 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BoxingNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BoxingNDRing.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.RingElement +import kscience.kmath.operations.Ring +import kscience.kmath.operations.RingElement public class BoxingNDRing>( override val shape: IntArray, diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferAccessor2D.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferAccessor2D.kt index 0a02fdc8f..00fc4aef0 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferAccessor2D.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferAccessor2D.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlin.reflect.KClass diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDAlgebra.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDAlgebra.kt index 4b1a67805..66b4f19e1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDAlgebra.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.* +import kscience.kmath.operations.* public interface BufferedNDAlgebra : NDAlgebra> { public val strides: Strides diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDElement.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDElement.kt index 4de31d101..d53702566 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/BufferedNDElement.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/BufferedNDElement.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.* +import kscience.kmath.operations.* /** * Base class for an element with context, containing strides diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt index 4326159d3..53587e503 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Buffers.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt @@ -1,8 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.complex -import kotlin.contracts.contract +import kscience.kmath.operations.Complex +import kscience.kmath.operations.complex import kotlin.reflect.KClass /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ComplexNDField.kt similarity index 96% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ComplexNDField.kt index 87dd11f59..f1f1074e5 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ComplexNDField.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ComplexNDField.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.ComplexField -import scientifik.kmath.operations.FieldElement -import scientifik.kmath.operations.complex +import kscience.kmath.operations.Complex +import kscience.kmath.operations.ComplexField +import kscience.kmath.operations.FieldElement +import kscience.kmath.operations.complex import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ExtendedNDField.kt similarity index 94% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ExtendedNDField.kt index 12731ff86..a9fa2763b 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ExtendedNDField.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ExtendedNDField.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.ExtendedField +import kscience.kmath.operations.ExtendedField /** * [ExtendedField] over [NDStructure]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FlaggedBuffer.kt similarity index 96% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FlaggedBuffer.kt index f627ede07..e3fda0e10 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FlaggedBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FlaggedBuffer.kt @@ -1,6 +1,5 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import kotlin.contracts.contract import kotlin.experimental.and /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FloatBuffer.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FloatBuffer.kt index 4bf7d6ad2..e96c45572 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/FloatBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/FloatBuffer.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.structures - -import kotlin.contracts.contract +package kscience.kmath.structures /** * Specialized [MutableBuffer] implementation over [FloatArray]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/IntBuffer.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/IntBuffer.kt index 7daa48201..0fe68803b 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/IntBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/IntBuffer.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.structures - -import kotlin.contracts.contract +package kscience.kmath.structures /** * Specialized [MutableBuffer] implementation over [IntArray]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/LongBuffer.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/LongBuffer.kt index f87fdc705..87853c251 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/LongBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/LongBuffer.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.structures - -import kotlin.contracts.contract +package kscience.kmath.structures /** * Specialized [MutableBuffer] implementation over [LongArray]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/MemoryBuffer.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/MemoryBuffer.kt index 2936932d0..b7e6a8218 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/MemoryBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/MemoryBuffer.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.memory.* +import kscience.memory.* /** * A non-boxing buffer over [Memory] object. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDAlgebra.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDAlgebra.kt index a6212469d..28eaef2f1 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDAlgebra.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDAlgebra.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.Space +import kscience.kmath.operations.Complex +import kscience.kmath.operations.Field +import kscience.kmath.operations.Ring +import kscience.kmath.operations.Space /** * An exception is thrown when the expected ans actual shape of NDArray differs diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDElement.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDElement.kt index 99a87f374..f2f565064 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDElement.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDElement.kt @@ -1,10 +1,9 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.Space -import kotlin.contracts.contract +import kscience.kmath.operations.Field +import kscience.kmath.operations.RealField +import kscience.kmath.operations.Ring +import kscience.kmath.operations.Space /** * The root for all [NDStructure] based algebra elements. Does not implement algebra element root because of problems with recursive self-types diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt similarity index 99% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt index d3007bb09..4ab49c9bc 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/NDStructure.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt @@ -1,6 +1,5 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import kotlin.contracts.contract import kotlin.jvm.JvmName import kotlin.reflect.KClass diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBuffer.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBuffer.kt index dbb599c85..2a03e2dd3 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBuffer.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.structures - -import kotlin.contracts.contract +package kscience.kmath.structures /** * Specialized [MutableBuffer] implementation over [DoubleArray]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBufferField.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBufferField.kt index 363ce0275..f7b2ee31e 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealBufferField.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealBufferField.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.ExtendedField -import scientifik.kmath.operations.ExtendedFieldOperations +import kscience.kmath.operations.ExtendedField +import kscience.kmath.operations.ExtendedFieldOperations import kotlin.math.* /** diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealNDField.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealNDField.kt index 94855d670..ed28fb9f2 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/RealNDField.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/RealNDField.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.FieldElement -import scientifik.kmath.operations.RealField +import kscience.kmath.operations.FieldElement +import kscience.kmath.operations.RealField public typealias RealNDElement = BufferedNDFieldElement diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortBuffer.kt similarity index 95% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortBuffer.kt index b364630f7..0d9222320 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortBuffer.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortBuffer.kt @@ -1,6 +1,4 @@ -package scientifik.kmath.structures - -import kotlin.contracts.contract +package kscience.kmath.structures /** * Specialized [MutableBuffer] implementation over [ShortArray]. diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortNDRing.kt similarity index 96% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortNDRing.kt index 30e87fd6a..3b506a26a 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/ShortNDRing.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/ShortNDRing.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.RingElement -import scientifik.kmath.operations.ShortRing +import kscience.kmath.operations.RingElement +import kscience.kmath.operations.ShortRing public typealias ShortNDElement = BufferedNDRingElement diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure1D.kt similarity index 98% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure1D.kt index 72602695f..af5cc9e3f 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure1D.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure1D.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures /** * A structure that is guaranteed to be one-dimensional diff --git a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure2D.kt similarity index 97% rename from kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt rename to kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure2D.kt index 7633d8898..25fdf3f3d 100644 --- a/kmath-core/src/commonMain/kotlin/scientifik/kmath/structures/Structure2D.kt +++ b/kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Structure2D.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures /** * A structure that is guaranteed to be two-dimensional diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/expressions/ExpressionFieldTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/expressions/ExpressionFieldTest.kt similarity index 87% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/expressions/ExpressionFieldTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/expressions/ExpressionFieldTest.kt index 485de08b4..1d3f520f6 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/expressions/ExpressionFieldTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/expressions/ExpressionFieldTest.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.expressions +package kscience.kmath.expressions -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.ComplexField -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Complex +import kscience.kmath.operations.ComplexField +import kscience.kmath.operations.RealField +import kscience.kmath.operations.invoke import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/MatrixTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/linear/MatrixTest.kt similarity index 91% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/MatrixTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/linear/MatrixTest.kt index 52a2f80a6..7cfa25a66 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/MatrixTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/linear/MatrixTest.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.NDStructure -import scientifik.kmath.structures.as2D +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.NDStructure +import kscience.kmath.structures.as2D import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/linear/RealLUSolverTest.kt similarity index 92% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/linear/RealLUSolverTest.kt index 9de9fb575..de07d3639 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/RealLUSolverTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/linear/RealLUSolverTest.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.structures.Matrix +import kscience.kmath.structures.Matrix import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/VectorSpaceTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/linear/VectorSpaceTest.kt similarity index 100% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/linear/VectorSpaceTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/linear/VectorSpaceTest.kt diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/misc/AutoDiffTest.kt similarity index 98% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/misc/AutoDiffTest.kt index 91d32cf8e..3b1813185 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/AutoDiffTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/misc/AutoDiffTest.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.misc +package kscience.kmath.misc -import scientifik.kmath.operations.RealField -import scientifik.kmath.structures.asBuffer +import kscience.kmath.operations.RealField +import kscience.kmath.structures.asBuffer import kotlin.math.PI import kotlin.math.pow import kotlin.math.sqrt diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/CumulativeKtTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/misc/CumulativeKtTest.kt similarity index 90% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/CumulativeKtTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/misc/CumulativeKtTest.kt index 82ea5318f..1e6d2fd5d 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/misc/CumulativeKtTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/misc/CumulativeKtTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.misc +package kscience.kmath.misc import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntAlgebraTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntAlgebraTest.kt similarity index 94% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntAlgebraTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntAlgebraTest.kt index d140f1017..78611e5d2 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntAlgebraTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntAlgebraTest.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.operations.internal.RingVerifier +import kscience.kmath.operations.internal.RingVerifier import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConstructorTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConstructorTest.kt similarity index 93% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConstructorTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConstructorTest.kt index 5e3f6d1b0..ba2582bbf 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConstructorTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConstructorTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConversionsTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConversionsTest.kt similarity index 96% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConversionsTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConversionsTest.kt index 41df1968d..0b433c436 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntConversionsTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntConversionsTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntOperationsTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntOperationsTest.kt similarity index 99% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntOperationsTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntOperationsTest.kt index b7f4cf43b..a3ed85c7b 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/BigIntOperationsTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/BigIntOperationsTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexFieldTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexFieldTest.kt similarity index 96% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexFieldTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexFieldTest.kt index 2c480ebea..c0b4853f4 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexFieldTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexFieldTest.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.operations.internal.FieldVerifier +import kscience.kmath.operations.internal.FieldVerifier import kotlin.math.PI import kotlin.math.abs import kotlin.test.Test diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexTest.kt similarity index 96% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexTest.kt index e8d698c70..f8b9b7262 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/ComplexTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/ComplexTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/RealFieldTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/RealFieldTest.kt similarity index 75% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/RealFieldTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/RealFieldTest.kt index a168b4afd..5705733cf 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/RealFieldTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/RealFieldTest.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.operations +package kscience.kmath.operations -import scientifik.kmath.operations.internal.FieldVerifier +import kscience.kmath.operations.internal.FieldVerifier import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/AlgebraicVerifier.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/AlgebraicVerifier.kt similarity index 55% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/AlgebraicVerifier.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/AlgebraicVerifier.kt index cb097d46e..7334c13a3 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/AlgebraicVerifier.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/AlgebraicVerifier.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.operations.internal +package kscience.kmath.operations.internal -import scientifik.kmath.operations.Algebra +import kscience.kmath.operations.Algebra internal interface AlgebraicVerifier where A : Algebra { val algebra: A diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/FieldVerifier.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/FieldVerifier.kt similarity index 88% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/FieldVerifier.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/FieldVerifier.kt index 973fd00b1..1ca09ab0c 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/FieldVerifier.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/FieldVerifier.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.operations.internal +package kscience.kmath.operations.internal -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Field +import kscience.kmath.operations.invoke import kotlin.test.assertEquals import kotlin.test.assertNotEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/RingVerifier.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/RingVerifier.kt similarity index 92% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/RingVerifier.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/RingVerifier.kt index 047a213e9..863169b9b 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/RingVerifier.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/RingVerifier.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.operations.internal +package kscience.kmath.operations.internal -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Ring +import kscience.kmath.operations.invoke import kotlin.test.assertEquals internal open class RingVerifier(override val algebra: Ring, a: T, b: T, c: T, x: Number) : diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/SpaceVerifier.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/SpaceVerifier.kt similarity index 92% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/SpaceVerifier.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/SpaceVerifier.kt index bc241c97d..4dc855829 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/operations/internal/SpaceVerifier.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/operations/internal/SpaceVerifier.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.operations.internal +package kscience.kmath.operations.internal -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Space +import kscience.kmath.operations.invoke import kotlin.test.assertEquals import kotlin.test.assertNotEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/ComplexBufferSpecTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/ComplexBufferSpecTest.kt similarity index 68% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/ComplexBufferSpecTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/structures/ComplexBufferSpecTest.kt index cbbe6f0f4..4837236db 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/ComplexBufferSpecTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/ComplexBufferSpecTest.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Complex -import scientifik.kmath.operations.complex +import kscience.kmath.operations.Complex +import kscience.kmath.operations.complex import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NDFieldTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NDFieldTest.kt similarity index 87% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NDFieldTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NDFieldTest.kt index 7abeefca6..79b56ea4a 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NDFieldTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NDFieldTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NumberNDFieldTest.kt b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NumberNDFieldTest.kt similarity index 90% rename from kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NumberNDFieldTest.kt rename to kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NumberNDFieldTest.kt index b7e2594ec..f5e008ef3 100644 --- a/kmath-core/src/commonTest/kotlin/scientifik/kmath/structures/NumberNDFieldTest.kt +++ b/kmath-core/src/commonTest/kotlin/kscience/kmath/structures/NumberNDFieldTest.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.structures +package kscience.kmath.structures -import scientifik.kmath.operations.Norm -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.NDElement.Companion.real2D +import kscience.kmath.operations.Norm +import kscience.kmath.operations.invoke +import kscience.kmath.structures.NDElement.Companion.real2D import kotlin.math.abs import kotlin.math.pow import kotlin.test.Test diff --git a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt b/kmath-core/src/jvmMain/kotlin/kscience/kmath/operations/BigNumbers.kt similarity index 98% rename from kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt rename to kmath-core/src/jvmMain/kotlin/kscience/kmath/operations/BigNumbers.kt index 7310dcc68..2f0978237 100644 --- a/kmath-core/src/jvmMain/kotlin/scientifik/kmath/operations/BigNumbers.kt +++ b/kmath-core/src/jvmMain/kotlin/kscience/kmath/operations/BigNumbers.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.operations +package kscience.kmath.operations import java.math.BigDecimal import java.math.BigInteger diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingIntChain.kt similarity index 89% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingIntChain.kt index 25a95273d..6088267a2 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingIntChain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingIntChain.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.chains +package kscience.kmath.chains /** * Performance optimized chain for integer values diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingRealChain.kt similarity index 90% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingRealChain.kt index 867fee19f..718b3a18b 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/BlockingRealChain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/BlockingRealChain.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.chains +package kscience.kmath.chains /** * Performance optimized chain for real values diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/Chain.kt similarity index 99% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/Chain.kt index e27290fbb..8c15e52c7 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/Chain.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/Chain.kt @@ -14,7 +14,7 @@ * limitations under the License. */ -package scientifik.kmath.chains +package kscience.kmath.chains import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.FlowCollector diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/flowExtra.kt similarity index 80% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/flowExtra.kt index 389e0b6db..6b14057fe 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/chains/flowExtra.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/chains/flowExtra.kt @@ -1,13 +1,13 @@ -package scientifik.kmath.chains +package kscience.kmath.chains import kotlinx.coroutines.ExperimentalCoroutinesApi import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.map import kotlinx.coroutines.flow.runningReduce import kotlinx.coroutines.flow.scan -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.SpaceOperations -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Space +import kscience.kmath.operations.SpaceOperations +import kscience.kmath.operations.invoke @ExperimentalCoroutinesApi public fun Flow.cumulativeSum(space: SpaceOperations): Flow = diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/coroutines/coroutinesExtra.kt similarity index 98% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/coroutines/coroutinesExtra.kt index 86bc2d6e3..351207111 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/coroutines/coroutinesExtra.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/coroutines/coroutinesExtra.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.coroutines +package kscience.kmath.coroutines import kotlinx.coroutines.* import kotlinx.coroutines.channels.produce diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/BufferFlow.kt similarity index 89% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/BufferFlow.kt index 991642787..328a7807c 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/BufferFlow.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/BufferFlow.kt @@ -1,12 +1,12 @@ -package scientifik.kmath.streaming +package kscience.kmath.streaming import kotlinx.coroutines.FlowPreview import kotlinx.coroutines.flow.* -import scientifik.kmath.chains.BlockingRealChain -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.BufferFactory -import scientifik.kmath.structures.RealBuffer -import scientifik.kmath.structures.asBuffer +import kscience.kmath.chains.BlockingRealChain +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.BufferFactory +import kscience.kmath.structures.RealBuffer +import kscience.kmath.structures.asBuffer /** * Create a [Flow] from buffer diff --git a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/RingBuffer.kt similarity index 92% rename from kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt rename to kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/RingBuffer.kt index b30100d43..385bbaae2 100644 --- a/kmath-coroutines/src/commonMain/kotlin/scientifik/kmath/streaming/RingBuffer.kt +++ b/kmath-coroutines/src/commonMain/kotlin/kscience/kmath/streaming/RingBuffer.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.streaming +package kscience.kmath.streaming import kotlinx.coroutines.sync.Mutex import kotlinx.coroutines.sync.withLock -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.MutableBuffer -import scientifik.kmath.structures.VirtualBuffer +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.MutableBuffer +import kscience.kmath.structures.VirtualBuffer /** * Thread-safe ring buffer diff --git a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt b/kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/chains/ChainExt.kt similarity index 93% rename from kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt rename to kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/chains/ChainExt.kt index c0df59645..3dfeddbac 100644 --- a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/chains/ChainExt.kt +++ b/kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/chains/ChainExt.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.chains +package kscience.kmath.chains import kotlinx.coroutines.runBlocking diff --git a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt b/kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/structures/LazyNDStructure.kt similarity index 96% rename from kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt rename to kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/structures/LazyNDStructure.kt index 82950159b..bb0d19c23 100644 --- a/kmath-coroutines/src/jvmMain/kotlin/scientifik/kmath/structures/LazyNDStructure.kt +++ b/kmath-coroutines/src/jvmMain/kotlin/kscience/kmath/structures/LazyNDStructure.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.structures +package kscience.kmath.structures import kotlinx.coroutines.* -import scientifik.kmath.coroutines.Math +import kscience.kmath.coroutines.Math public class LazyNDStructure( public val scope: CoroutineScope, diff --git a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt b/kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/BufferFlowTest.kt similarity index 88% rename from kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt rename to kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/BufferFlowTest.kt index d17e4d86b..a9bf38c12 100644 --- a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/BufferFlowTest.kt +++ b/kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/BufferFlowTest.kt @@ -1,12 +1,12 @@ -package scientifik.kmath.streaming +package kscience.kmath.streaming import kotlinx.coroutines.* import kotlinx.coroutines.flow.asFlow import kotlinx.coroutines.flow.collect +import kscience.kmath.coroutines.async +import kscience.kmath.coroutines.collect +import kscience.kmath.coroutines.mapParallel import org.junit.jupiter.api.Timeout -import scientifik.kmath.coroutines.async -import scientifik.kmath.coroutines.collect -import scientifik.kmath.coroutines.mapParallel import java.util.concurrent.Executors import kotlin.test.Test diff --git a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt b/kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/RingBufferTest.kt similarity index 91% rename from kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt rename to kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/RingBufferTest.kt index 630749861..5bb0c1d40 100644 --- a/kmath-coroutines/src/jvmTest/kotlin/scientifik/kmath/streaming/RingBufferTest.kt +++ b/kmath-coroutines/src/jvmTest/kotlin/kscience/kmath/streaming/RingBufferTest.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.streaming +package kscience.kmath.streaming import kotlinx.coroutines.flow.* import kotlinx.coroutines.runBlocking -import scientifik.kmath.structures.asSequence +import kscience.kmath.structures.asSequence import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt b/kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Dimensions.kt similarity index 95% rename from kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt rename to kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Dimensions.kt index e96367443..f49e1e0f0 100644 --- a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Dimensions.kt +++ b/kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Dimensions.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.dimensions +package kscience.kmath.dimensions import kotlin.reflect.KClass diff --git a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt b/kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Wrappers.kt similarity index 93% rename from kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt rename to kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Wrappers.kt index 120069d83..4111cb78d 100644 --- a/kmath-dimensions/src/commonMain/kotlin/scientifik/kmath/dimensions/Wrappers.kt +++ b/kmath-dimensions/src/commonMain/kotlin/kscience/kmath/dimensions/Wrappers.kt @@ -1,14 +1,14 @@ -package scientifik.kmath.dimensions +package kscience.kmath.dimensions -import scientifik.kmath.linear.GenericMatrixContext -import scientifik.kmath.linear.MatrixContext -import scientifik.kmath.linear.Point -import scientifik.kmath.linear.transpose -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.Structure2D +import kscience.kmath.linear.GenericMatrixContext +import kscience.kmath.linear.MatrixContext +import kscience.kmath.linear.Point +import kscience.kmath.linear.transpose +import kscience.kmath.operations.RealField +import kscience.kmath.operations.Ring +import kscience.kmath.operations.invoke +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.Structure2D /** * A matrix with compile-time controlled dimension diff --git a/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt b/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt index dc7acdcc2..f44b16753 100644 --- a/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt +++ b/kmath-dimensions/src/commonTest/kotlin/scientifik/dimensions/DMatrixContextTest.kt @@ -1,8 +1,8 @@ -package scientifik.dimensions +package kscience.dimensions -import scientifik.kmath.dimensions.D2 -import scientifik.kmath.dimensions.D3 -import scientifik.kmath.dimensions.DMatrixContext +import kscience.kmath.dimensions.D2 +import kscience.kmath.dimensions.D3 +import kscience.kmath.dimensions.DMatrixContext import kotlin.test.Test internal class DMatrixContextTest { diff --git a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jsMain/kotlin/kscience/kmath/dimensions/dim.kt similarity index 94% rename from kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt rename to kmath-dimensions/src/jsMain/kotlin/kscience/kmath/dimensions/dim.kt index 139f77e92..4230da156 100644 --- a/kmath-dimensions/src/jsMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jsMain/kotlin/kscience/kmath/dimensions/dim.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.dimensions +package kscience.kmath.dimensions import kotlin.reflect.KClass diff --git a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt b/kmath-dimensions/src/jvmMain/kotlin/kscience/kmath/dimensions/dim.kt similarity index 91% rename from kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt rename to kmath-dimensions/src/jvmMain/kotlin/kscience/kmath/dimensions/dim.kt index 714133ecb..dec3979ef 100644 --- a/kmath-dimensions/src/jvmMain/kotlin/scientifik/kmath/dimensions/dim.kt +++ b/kmath-dimensions/src/jvmMain/kotlin/kscience/kmath/dimensions/dim.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.dimensions +package kscience.kmath.dimensions import kotlin.reflect.KClass diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/RealVector.kt similarity index 76% rename from kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt rename to kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/RealVector.kt index 474a701ca..ba5f8444b 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/RealVector.kt +++ b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/RealVector.kt @@ -1,15 +1,15 @@ -package scientifik.kmath.real +package kscience.kmath.real -import scientifik.kmath.linear.BufferVectorSpace -import scientifik.kmath.linear.Point -import scientifik.kmath.linear.VectorSpace -import scientifik.kmath.operations.Norm -import scientifik.kmath.operations.RealField -import scientifik.kmath.operations.SpaceElement -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.RealBuffer -import scientifik.kmath.structures.asBuffer -import scientifik.kmath.structures.asIterable +import kscience.kmath.linear.BufferVectorSpace +import kscience.kmath.linear.Point +import kscience.kmath.linear.VectorSpace +import kscience.kmath.operations.Norm +import kscience.kmath.operations.RealField +import kscience.kmath.operations.SpaceElement +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.RealBuffer +import kscience.kmath.structures.asBuffer +import kscience.kmath.structures.asIterable import kotlin.math.sqrt public typealias RealPoint = Point diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realBuffer.kt similarity index 67% rename from kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt rename to kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realBuffer.kt index 480481d97..0a2119b0d 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realBuffer.kt +++ b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realBuffer.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.real +package kscience.kmath.real -import scientifik.kmath.structures.RealBuffer +import kscience.kmath.structures.RealBuffer /** * Simplified [RealBuffer] to array comparison diff --git a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realMatrix.kt similarity index 91% rename from kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt rename to kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realMatrix.kt index 1bc5f0a5b..1860b5870 100644 --- a/kmath-for-real/src/commonMain/kotlin/scientifik/kmath/real/realMatrix.kt +++ b/kmath-for-real/src/commonMain/kotlin/kscience/kmath/real/realMatrix.kt @@ -1,15 +1,14 @@ -package scientifik.kmath.real +package kscience.kmath.real -import scientifik.kmath.linear.MatrixContext -import scientifik.kmath.linear.RealMatrixContext.elementContext -import scientifik.kmath.linear.VirtualMatrix -import scientifik.kmath.operations.invoke -import scientifik.kmath.operations.sum -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.Matrix -import scientifik.kmath.structures.RealBuffer -import scientifik.kmath.structures.asIterable -import kotlin.contracts.contract +import kscience.kmath.linear.MatrixContext +import kscience.kmath.linear.RealMatrixContext.elementContext +import kscience.kmath.linear.VirtualMatrix +import kscience.kmath.operations.invoke +import kscience.kmath.operations.sum +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.Matrix +import kscience.kmath.structures.RealBuffer +import kscience.kmath.structures.asIterable import kotlin.math.pow /* diff --git a/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt b/kmath-for-real/src/commonTest/kotlin/kscience/kmath/linear/VectorTest.kt similarity index 88% rename from kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt rename to kmath-for-real/src/commonTest/kotlin/kscience/kmath/linear/VectorTest.kt index e24037953..17ff4ef20 100644 --- a/kmath-for-real/src/commonTest/kotlin/scientifik/kmath/linear/VectorTest.kt +++ b/kmath-for-real/src/commonTest/kotlin/kscience/kmath/linear/VectorTest.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.linear +package kscience.kmath.linear -import scientifik.kmath.operations.invoke -import scientifik.kmath.real.RealVector +import kscience.kmath.operations.invoke +import kscience.kmath.real.RealVector import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt b/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt index baf1db8b5..859938481 100644 --- a/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt +++ b/kmath-for-real/src/commonTest/kotlin/scientific.kmath.real/RealMatrixTest.kt @@ -1,9 +1,9 @@ package scientific.kmath.real -import scientifik.kmath.linear.VirtualMatrix -import scientifik.kmath.linear.build -import scientifik.kmath.real.* -import scientifik.kmath.structures.Matrix +import kscience.kmath.linear.VirtualMatrix +import kscience.kmath.linear.build +import kscience.kmath.real.* +import kscience.kmath.structures.Matrix import kotlin.test.Test import kotlin.test.assertEquals import kotlin.test.assertTrue diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Piecewise.kt similarity index 93% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Piecewise.kt index 52030f0fd..a8c020c05 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Piecewise.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Piecewise.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.functions +package kscience.kmath.functions -import scientifik.kmath.operations.Ring +import kscience.kmath.operations.Ring public fun interface Piecewise { public fun findPiece(arg: T): R? diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Polynomial.kt similarity index 93% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Polynomial.kt index 3d97936f9..c513a6889 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/Polynomial.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/Polynomial.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.functions +package kscience.kmath.functions -import scientifik.kmath.operations.Ring -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke +import kscience.kmath.operations.Ring +import kscience.kmath.operations.Space +import kscience.kmath.operations.invoke import kotlin.contracts.InvocationKind import kotlin.contracts.contract import kotlin.math.max diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/functions.kt similarity index 88% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/functions.kt index 2b6073e07..d780c16f3 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/functions/functions.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/functions/functions.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.functions +package kscience.kmath.functions -import scientifik.kmath.operations.Algebra -import scientifik.kmath.operations.RealField +import kscience.kmath.operations.Algebra +import kscience.kmath.operations.RealField // TODO make fun interface when KT-41770 is fixed /** diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/Interpolator.kt similarity index 83% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/Interpolator.kt index a53cafece..0620b4aa8 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/Interpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/Interpolator.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation -import scientifik.kmath.functions.PiecewisePolynomial -import scientifik.kmath.functions.value -import scientifik.kmath.operations.Ring -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.asBuffer +import kscience.kmath.functions.PiecewisePolynomial +import kscience.kmath.functions.value +import kscience.kmath.operations.Ring +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.asBuffer public fun interface Interpolator { public fun interpolate(points: XYPointSet): (X) -> Y diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LinearInterpolator.kt similarity index 76% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LinearInterpolator.kt index 4fac86693..377aa1fbe 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LinearInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LinearInterpolator.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation -import scientifik.kmath.functions.OrderedPiecewisePolynomial -import scientifik.kmath.functions.PiecewisePolynomial -import scientifik.kmath.functions.Polynomial -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.invoke +import kscience.kmath.functions.OrderedPiecewisePolynomial +import kscience.kmath.functions.PiecewisePolynomial +import kscience.kmath.functions.Polynomial +import kscience.kmath.operations.Field +import kscience.kmath.operations.invoke /** * Reference JVM implementation: https://github.com/apache/commons-math/blob/master/src/main/java/org/apache/commons/math4/analysis/interpolation/LinearInterpolator.java diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LoessInterpolator.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LoessInterpolator.kt similarity index 98% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LoessInterpolator.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LoessInterpolator.kt index 6707bd8bc..6931857b1 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/LoessInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/LoessInterpolator.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation // -//import scientifik.kmath.functions.PiecewisePolynomial -//import scientifik.kmath.operations.Ring -//import scientifik.kmath.structures.Buffer +//import kscience.kmath.functions.PiecewisePolynomial +//import kscience.kmath.operations.Ring +//import kscience.kmath.structures.Buffer //import kotlin.math.abs //import kotlin.math.sqrt // diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/SplineInterpolator.kt similarity index 86% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/SplineInterpolator.kt index e5dd8906b..6cda45f72 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/SplineInterpolator.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/SplineInterpolator.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation -import scientifik.kmath.functions.OrderedPiecewisePolynomial -import scientifik.kmath.functions.PiecewisePolynomial -import scientifik.kmath.functions.Polynomial -import scientifik.kmath.operations.Field -import scientifik.kmath.operations.invoke -import scientifik.kmath.structures.MutableBufferFactory +import kscience.kmath.functions.OrderedPiecewisePolynomial +import kscience.kmath.functions.PiecewisePolynomial +import kscience.kmath.functions.Polynomial +import kscience.kmath.operations.Field +import kscience.kmath.operations.invoke +import kscience.kmath.structures.MutableBufferFactory /** * Generic spline interpolator. Not recommended for performance critical places, use platform-specific and type specific ones. diff --git a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/XYPointSet.kt similarity index 92% rename from kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt rename to kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/XYPointSet.kt index 3c45223d9..2abb7742c 100644 --- a/kmath-functions/src/commonMain/kotlin/scientifik/kmath/interpolation/XYPointSet.kt +++ b/kmath-functions/src/commonMain/kotlin/kscience/kmath/interpolation/XYPointSet.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.Structure2D +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.Structure2D public interface XYPointSet { public val size: Int diff --git a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt b/kmath-functions/src/commonTest/kotlin/kscience/kmath/interpolation/LinearInterpolatorTest.kt similarity index 77% rename from kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt rename to kmath-functions/src/commonTest/kotlin/kscience/kmath/interpolation/LinearInterpolatorTest.kt index 3d39de4c9..303615676 100644 --- a/kmath-functions/src/commonTest/kotlin/scientifik/kmath/interpolation/LinearInterpolatorTest.kt +++ b/kmath-functions/src/commonTest/kotlin/kscience/kmath/interpolation/LinearInterpolatorTest.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.interpolation +package kscience.kmath.interpolation -import scientifik.kmath.functions.PiecewisePolynomial -import scientifik.kmath.functions.asFunction -import scientifik.kmath.operations.RealField +import kscience.kmath.functions.PiecewisePolynomial +import kscience.kmath.functions.asFunction +import kscience.kmath.operations.RealField import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean2DSpace.kt similarity index 90% rename from kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt rename to kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean2DSpace.kt index a5318b709..c2a883a64 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean2DSpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean2DSpace.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.geometry +package kscience.kmath.geometry -import scientifik.kmath.linear.Point -import scientifik.kmath.operations.SpaceElement -import scientifik.kmath.operations.invoke +import kscience.kmath.linear.Point +import kscience.kmath.operations.SpaceElement +import kscience.kmath.operations.invoke import kotlin.math.sqrt public interface Vector2D : Point, Vector, SpaceElement { diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean3DSpace.kt similarity index 91% rename from kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt rename to kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean3DSpace.kt index f695c0f64..e0052d791 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Euclidean3DSpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Euclidean3DSpace.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.geometry +package kscience.kmath.geometry -import scientifik.kmath.linear.Point -import scientifik.kmath.operations.SpaceElement -import scientifik.kmath.operations.invoke +import kscience.kmath.linear.Point +import kscience.kmath.operations.SpaceElement +import kscience.kmath.operations.invoke import kotlin.math.sqrt public interface Vector3D : Point, Vector, SpaceElement { diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/GeometrySpace.kt similarity index 76% rename from kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt rename to kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/GeometrySpace.kt index 6798a6291..64badacf5 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/GeometrySpace.kt +++ b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/GeometrySpace.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.geometry +package kscience.kmath.geometry -import scientifik.kmath.operations.Space +import kscience.kmath.operations.Space public interface Vector diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Line.kt similarity index 81% rename from kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt rename to kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Line.kt index a529f7f1b..ec2ce31ca 100644 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/Line.kt +++ b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/Line.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.geometry +package kscience.kmath.geometry public data class Line(val base: V, val direction: V) diff --git a/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/ReferenceFrame.kt b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/ReferenceFrame.kt new file mode 100644 index 000000000..f9de7b51f --- /dev/null +++ b/kmath-geometry/src/commonMain/kotlin/kscience/kmath/geometry/ReferenceFrame.kt @@ -0,0 +1,3 @@ +package kscience.kmath.geometry + +public interface ReferenceFrame diff --git a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt b/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt deleted file mode 100644 index 49bf3793c..000000000 --- a/kmath-geometry/src/commonMain/kotlin/scientifik/kmath/geometry/ReferenceFrame.kt +++ /dev/null @@ -1,3 +0,0 @@ -package scientifik.kmath.geometry - -public interface ReferenceFrame diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Counters.kt similarity index 91% rename from kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt rename to kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Counters.kt index ede6db5cf..7a263a9fc 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Counters.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram /* * Common representation for atomic counters diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Histogram.kt similarity index 87% rename from kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt rename to kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Histogram.kt index 4ecd62809..98300dada 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/Histogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/Histogram.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram -import scientifik.kmath.domains.Domain -import scientifik.kmath.linear.Point -import scientifik.kmath.structures.ArrayBuffer -import scientifik.kmath.structures.RealBuffer +import kscience.kmath.domains.Domain +import kscience.kmath.linear.Point +import kscience.kmath.structures.ArrayBuffer +import kscience.kmath.structures.RealBuffer /** * The bin in the histogram. The histogram is by definition always done in the real space diff --git a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/RealHistogram.kt similarity index 95% rename from kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt rename to kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/RealHistogram.kt index 64ddc5515..c58952ab4 100644 --- a/kmath-histograms/src/commonMain/kotlin/scientifik/kmath/histogram/RealHistogram.kt +++ b/kmath-histograms/src/commonMain/kotlin/kscience/kmath/histogram/RealHistogram.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram -import scientifik.kmath.linear.Point -import scientifik.kmath.operations.SpaceOperations -import scientifik.kmath.operations.invoke -import scientifik.kmath.real.asVector -import scientifik.kmath.structures.* +import kscience.kmath.linear.Point +import kscience.kmath.operations.SpaceOperations +import kscience.kmath.operations.invoke +import kscience.kmath.real.asVector +import kscience.kmath.structures.* import kotlin.math.floor public data class BinDef>( diff --git a/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt b/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt index 4400da7c9..87292f17e 100644 --- a/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt +++ b/kmath-histograms/src/commonTest/kotlin/scietifik/kmath/histogram/MultivariateHistogramTest.kt @@ -1,9 +1,9 @@ package scietifik.kmath.histogram -import scientifik.kmath.histogram.RealHistogram -import scientifik.kmath.histogram.fill -import scientifik.kmath.histogram.put -import scientifik.kmath.real.RealVector +import kscience.kmath.histogram.RealHistogram +import kscience.kmath.histogram.fill +import kscience.kmath.histogram.put +import kscience.kmath.real.RealVector import kotlin.random.Random import kotlin.test.Test import kotlin.test.assertEquals diff --git a/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/jsMain/kotlin/kscience/kmath/histogram/Counters.kt similarity index 94% rename from kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt rename to kmath-histograms/src/jsMain/kotlin/kscience/kmath/histogram/Counters.kt index 8e2e946f4..d0fa1f4c2 100644 --- a/kmath-histograms/src/jsMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/jsMain/kotlin/kscience/kmath/histogram/Counters.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram public actual class LongCounter { private var sum: Long = 0L diff --git a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt b/kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/Counters.kt similarity index 84% rename from kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt rename to kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/Counters.kt index dcf3d5491..efbd185ef 100644 --- a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/Counters.kt +++ b/kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/Counters.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram import java.util.concurrent.atomic.DoubleAdder import java.util.concurrent.atomic.LongAdder diff --git a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt b/kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/UnivariateHistogram.kt similarity index 95% rename from kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt rename to kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/UnivariateHistogram.kt index add01d82c..5fada1302 100644 --- a/kmath-histograms/src/jvmMain/kotlin/scientifik/kmath/histogram/UnivariateHistogram.kt +++ b/kmath-histograms/src/jvmMain/kotlin/kscience/kmath/histogram/UnivariateHistogram.kt @@ -1,8 +1,8 @@ -package scientifik.kmath.histogram +package kscience.kmath.histogram -import scientifik.kmath.real.RealVector -import scientifik.kmath.real.asVector -import scientifik.kmath.structures.Buffer +import kscience.kmath.real.RealVector +import kscience.kmath.real.asVector +import kscience.kmath.structures.Buffer import java.util.* import kotlin.math.floor diff --git a/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt b/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt index 9b6eb0435..8de9a7a0c 100644 --- a/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt +++ b/kmath-memory/src/commonMain/kotlin/scientifik/memory/Memory.kt @@ -1,4 +1,4 @@ -package scientifik.memory +package kscience.memory import kotlin.contracts.InvocationKind import kotlin.contracts.contract diff --git a/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt b/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt index 5bb163bc1..d2cbb32fd 100644 --- a/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt +++ b/kmath-memory/src/commonMain/kotlin/scientifik/memory/MemorySpec.kt @@ -1,4 +1,4 @@ -package scientifik.memory +package kscience.memory /** * A specification to read or write custom objects with fixed size in bytes. diff --git a/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt b/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt index 452ef1fea..d6b8841e4 100644 --- a/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt +++ b/kmath-memory/src/jsMain/kotlin/scientifik/memory/DataViewMemory.kt @@ -1,4 +1,4 @@ -package scientifik.memory +package kscience.memory import org.khronos.webgl.ArrayBuffer import org.khronos.webgl.DataView diff --git a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt index 0e7c49c74..c912b28ff 100644 --- a/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt +++ b/kmath-memory/src/jvmMain/kotlin/scientifik/memory/ByteBufferMemory.kt @@ -1,4 +1,4 @@ -package scientifik.memory +package kscience.memory import java.io.IOException import java.nio.ByteBuffer diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Distribution.kt similarity index 90% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Distribution.kt index 3c4d0420f..d55a52f56 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Distribution.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Distribution.kt @@ -1,9 +1,9 @@ -package scientifik.kmath.prob +package kscience.kmath.prob -import scientifik.kmath.chains.Chain -import scientifik.kmath.chains.collect -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.BufferFactory +import kscience.kmath.chains.Chain +import kscience.kmath.chains.collect +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.BufferFactory public interface Sampler { public fun sample(generator: RandomGenerator): Chain diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/FactorizedDistribution.kt similarity index 93% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/FactorizedDistribution.kt index 05b62deb8..4d713fc4e 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/FactorizedDistribution.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/FactorizedDistribution.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.prob +package kscience.kmath.prob -import scientifik.kmath.chains.Chain -import scientifik.kmath.chains.SimpleChain +import kscience.kmath.chains.Chain +import kscience.kmath.chains.SimpleChain /** * A multivariate distribution which takes a map of parameters diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomChain.kt similarity index 87% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomChain.kt index 4fc7fe241..b4a80f6c5 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomChain.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomChain.kt @@ -1,6 +1,6 @@ -package scientifik.kmath.prob +package kscience.kmath.prob -import scientifik.kmath.chains.Chain +import kscience.kmath.chains.Chain /** * A possibly stateful chain producing random values. diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomGenerator.kt similarity index 98% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomGenerator.kt index ecf9beeb1..0d95d6f97 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/RandomGenerator.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/RandomGenerator.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import kotlin.random.Random diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/SamplerAlgebra.kt similarity index 79% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/SamplerAlgebra.kt index 184665928..e363ba30b 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/SamplerAlgebra.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/SamplerAlgebra.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.prob +package kscience.kmath.prob -import scientifik.kmath.chains.Chain -import scientifik.kmath.chains.ConstantChain -import scientifik.kmath.chains.map -import scientifik.kmath.chains.zip -import scientifik.kmath.operations.Space -import scientifik.kmath.operations.invoke +import kscience.kmath.chains.Chain +import kscience.kmath.chains.ConstantChain +import kscience.kmath.chains.map +import kscience.kmath.chains.zip +import kscience.kmath.operations.Space +import kscience.kmath.operations.invoke public class BasicSampler(public val chainBuilder: (RandomGenerator) -> Chain) : Sampler { public override fun sample(generator: RandomGenerator): Chain = chainBuilder(generator) diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Statistic.kt similarity index 92% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Statistic.kt index 7811b88f6..6720a3d7f 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/Statistic.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/Statistic.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import kotlinx.coroutines.CoroutineDispatcher import kotlinx.coroutines.Dispatchers @@ -7,11 +7,11 @@ import kotlinx.coroutines.FlowPreview import kotlinx.coroutines.flow.Flow import kotlinx.coroutines.flow.map import kotlinx.coroutines.flow.runningReduce -import scientifik.kmath.coroutines.mapParallel -import scientifik.kmath.operations.* -import scientifik.kmath.structures.Buffer -import scientifik.kmath.structures.asIterable -import scientifik.kmath.structures.asSequence +import kscience.kmath.coroutines.mapParallel +import kscience.kmath.operations.* +import kscience.kmath.structures.Buffer +import kscience.kmath.structures.asIterable +import kscience.kmath.structures.asSequence /** * A function, that transforms a buffer of random quantities to some resulting value diff --git a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/UniformDistribution.kt similarity index 87% rename from kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt rename to kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/UniformDistribution.kt index 10445219d..8df2c01e1 100644 --- a/kmath-prob/src/commonMain/kotlin/scientifik/kmath/prob/UniformDistribution.kt +++ b/kmath-prob/src/commonMain/kotlin/kscience/kmath/prob/UniformDistribution.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.prob +package kscience.kmath.prob -import scientifik.kmath.chains.Chain -import scientifik.kmath.chains.SimpleChain +import kscience.kmath.chains.Chain +import kscience.kmath.chains.SimpleChain public class UniformDistribution(public val range: ClosedFloatingPointRange) : UnivariateDistribution { private val length: Double = range.endInclusive - range.start diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt b/kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/RandomSourceGenerator.kt similarity index 98% rename from kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt rename to kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/RandomSourceGenerator.kt index eda36415a..18be6f019 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/RandomSourceGenerator.kt +++ b/kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/RandomSourceGenerator.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import org.apache.commons.rng.UniformRandomProvider import org.apache.commons.rng.simple.RandomSource diff --git a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt b/kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/distributions.kt similarity index 95% rename from kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt rename to kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/distributions.kt index 923317ed2..ff20572cc 100644 --- a/kmath-prob/src/jvmMain/kotlin/scientifik/kmath/prob/distributions.kt +++ b/kmath-prob/src/jvmMain/kotlin/kscience/kmath/prob/distributions.kt @@ -1,11 +1,10 @@ -package scientifik.kmath.prob +package kscience.kmath.prob +import kscience.kmath.chains.BlockingIntChain +import kscience.kmath.chains.BlockingRealChain +import kscience.kmath.chains.Chain import org.apache.commons.rng.UniformRandomProvider import org.apache.commons.rng.sampling.distribution.* -import scientifik.kmath.chains.BlockingIntChain -import scientifik.kmath.chains.BlockingRealChain -import scientifik.kmath.chains.Chain -import java.util.* import kotlin.math.PI import kotlin.math.exp import kotlin.math.pow diff --git a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/CommonsDistributionsTest.kt similarity index 96% rename from kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt rename to kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/CommonsDistributionsTest.kt index 0680083ce..12a00684b 100644 --- a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/CommonsDistributionsTest.kt +++ b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/CommonsDistributionsTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import kotlinx.coroutines.flow.take import kotlinx.coroutines.flow.toList diff --git a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/SamplerTest.kt b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/SamplerTest.kt similarity index 92% rename from kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/SamplerTest.kt rename to kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/SamplerTest.kt index 1152f3057..3d8a4f531 100644 --- a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/SamplerTest.kt +++ b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/SamplerTest.kt @@ -1,4 +1,4 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import kotlinx.coroutines.runBlocking import kotlin.test.Test diff --git a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/StatisticTest.kt similarity index 91% rename from kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt rename to kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/StatisticTest.kt index 30789a004..22ca472a8 100644 --- a/kmath-prob/src/jvmTest/kotlin/scientifik/kmath/prob/StatisticTest.kt +++ b/kmath-prob/src/jvmTest/kotlin/kscience/kmath/prob/StatisticTest.kt @@ -1,10 +1,10 @@ -package scientifik.kmath.prob +package kscience.kmath.prob import kotlinx.coroutines.flow.drop import kotlinx.coroutines.flow.first import kotlinx.coroutines.runBlocking -import scientifik.kmath.streaming.chunked +import kscience.kmath.streaming.chunked import kotlin.test.Test internal class StatisticTest { diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt b/kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorBuffer.kt similarity index 88% rename from kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt rename to kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorBuffer.kt index 97ab9e6d7..5c9611758 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorBuffer.kt +++ b/kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorBuffer.kt @@ -1,7 +1,7 @@ -package scientifik.kmath.viktor +package kscience.kmath.viktor +import kscience.kmath.structures.MutableBuffer import org.jetbrains.bio.viktor.F64FlatArray -import scientifik.kmath.structures.MutableBuffer @Suppress("NOTHING_TO_INLINE", "OVERRIDE_BY_INLINE") public inline class ViktorBuffer(public val flatArray: F64FlatArray) : MutableBuffer { diff --git a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt b/kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorNDStructure.kt similarity index 92% rename from kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt rename to kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorNDStructure.kt index cbd5357af..2471362cb 100644 --- a/kmath-viktor/src/main/kotlin/scientifik/kmath/viktor/ViktorNDStructure.kt +++ b/kmath-viktor/src/main/kotlin/kscience/kmath/viktor/ViktorNDStructure.kt @@ -1,11 +1,11 @@ -package scientifik.kmath.viktor +package kscience.kmath.viktor +import kscience.kmath.operations.RealField +import kscience.kmath.structures.DefaultStrides +import kscience.kmath.structures.MutableNDStructure +import kscience.kmath.structures.NDField +import kscience.kmath.structures.Strides import org.jetbrains.bio.viktor.F64Array -import scientifik.kmath.operations.RealField -import scientifik.kmath.structures.DefaultStrides -import scientifik.kmath.structures.MutableNDStructure -import scientifik.kmath.structures.NDField -import scientifik.kmath.structures.Strides @Suppress("OVERRIDE_BY_INLINE", "NOTHING_TO_INLINE") public inline class ViktorNDStructure(public val f64Buffer: F64Array) : MutableNDStructure { diff --git a/settings.gradle.kts b/settings.gradle.kts index 666a05e45..c0d729c32 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -15,7 +15,7 @@ pluginManagement { jcenter() gradlePluginPortal() maven("https://dl.bintray.com/kotlin/kotlin-eap") - maven("https://dl.bintray.com/mipt-npm/scientifik") + maven("https://dl.bintray.com/mipt-npm/kscience") maven("https://dl.bintray.com/mipt-npm/dev") maven("https://dl.bintray.com/kotlin/kotlinx") maven("https://dl.bintray.com/kotlin/kotlin-dev/") From 735eb937dfddb4220557bc1d46fe096b91d7fdc8 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Sun, 20 Sep 2020 22:40:29 +0300 Subject: [PATCH 21/26] Update CHANGELOG.md --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 386e1277e..550aad22b 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,6 +4,7 @@ ### Added - Better trigonometric and hyperbolic functions for `AutoDiffField` (https://github.com/mipt-npm/kmath/pull/140). ### Changed +- Package changed from `scientifik` to `kscience.kmath`. ### Deprecated From eb8b7196dc33279116b2a93b88b73071ad912b9a Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Sun, 20 Sep 2020 22:41:33 +0300 Subject: [PATCH 22/26] Update CHANGELOG.md --- CHANGELOG.md | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 550aad22b..60aee156f 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,15 +4,18 @@ ### Added - Better trigonometric and hyperbolic functions for `AutoDiffField` (https://github.com/mipt-npm/kmath/pull/140). ### Changed -- Package changed from `scientifik` to `kscience.kmath`. +- Package changed from `scientifik` to `kscience.kmath`. ### Deprecated ### Removed +- Koma module ### Fixed - `symbol` method in `MstExtendedField` (https://github.com/mipt-npm/kmath/pull/140) + ### Security + ## [0.1.4] ### Added From 68845b7a03a5fe75d73e1d9aa5ffb825cb6efb9e Mon Sep 17 00:00:00 2001 From: Iaroslav Date: Mon, 21 Sep 2020 18:49:02 +0700 Subject: [PATCH 23/26] Update CHANGELOG.md --- CHANGELOG.md | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 60aee156f..bd9d0c2aa 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,14 +2,20 @@ ## [Unreleased] ### Added +- `fun` annotation for SAM interfaces in library +- Explicit `public` visibility for all public APIs - Better trigonometric and hyperbolic functions for `AutoDiffField` (https://github.com/mipt-npm/kmath/pull/140). + ### Changed - Package changed from `scientifik` to `kscience.kmath`. +- Gradle version: 6.6 -> 6.6.1 +- Minor exceptions refactor (throwing `IllegalArgumentException` by argument checks instead of `IllegalStateException`) +- `Polynomial` secondary constructor made function. ### Deprecated ### Removed -- Koma module +- `kmath-koma` module because it doesn't support Kotlin 1.4. ### Fixed - `symbol` method in `MstExtendedField` (https://github.com/mipt-npm/kmath/pull/140) @@ -43,7 +49,7 @@ - `power(T, Int)` extension function has preconditions and supports `Field` - Memory objects have more preconditions (overflow checking) - `tg` function is renamed to `tan` (https://github.com/mipt-npm/kmath/pull/114) -- Gradle version: 6.3 -> 6.6.1 +- Gradle version: 6.3 -> 6.6 - Moved probability distributions to commons-rng and to `kmath-prob` ### Fixed From bf569e10f9be41d3aea1ed30d0a547e0f6d44310 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Mon, 21 Sep 2020 15:47:47 +0300 Subject: [PATCH 24/26] Implementation for #139 --- README.md | 29 ++++- build.gradle.kts | 81 ++++++++++++- doc/features.md | 14 --- docs/README-STUB.md | 110 ++++++++++++++++++ {doc => docs}/algebra.md | 0 {doc => docs}/buffers.md | 0 {doc => docs}/codestyle.md | 0 {doc => docs}/contexts.md | 0 {doc => docs}/expressions.md | 0 docs/features.md | 14 +++ {doc => docs}/histograms.md | 0 {doc => docs}/linear.md | 0 {doc => docs}/nd-structure.md | 0 kmath-core/{README.md => docs/README-STUB.md} | 14 +-- kmath-core/docs/kscience-module.json | 36 ++++++ settings.gradle.kts | 3 +- 16 files changed, 271 insertions(+), 30 deletions(-) delete mode 100644 doc/features.md create mode 100644 docs/README-STUB.md rename {doc => docs}/algebra.md (100%) rename {doc => docs}/buffers.md (100%) rename {doc => docs}/codestyle.md (100%) rename {doc => docs}/contexts.md (100%) rename {doc => docs}/expressions.md (100%) create mode 100644 docs/features.md rename {doc => docs}/histograms.md (100%) rename {doc => docs}/linear.md (100%) rename {doc => docs}/nd-structure.md (100%) rename kmath-core/{README.md => docs/README-STUB.md} (62%) create mode 100644 kmath-core/docs/kscience-module.json diff --git a/README.md b/README.md index c2e67e815..44363b27a 100644 --- a/README.md +++ b/README.md @@ -29,7 +29,7 @@ The Kotlin MATHematics library is intended as a Kotlin-based analog to Python's ## Features -Actual feature list is [here](doc/features.md) +Actual feature list is [here](docs/features.md) * **Algebra** * Algebraic structures like rings, spaces and field (**TODO** add example to wiki) @@ -66,6 +66,29 @@ can be used for a wide variety of purposes from high performance calculations to * **Fitting** Non-linear curve fitting facilities +## Modules + +### [kmath-core](kmath-core) + - [algebras](kmath-core/src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt) : Algebraic structures: contexts and elements + - [nd](kmath-core/src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt) : Many-dimensional structures + - [buffers](kmath-core/src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt) : One-dimensional structure + - [expressions](kmath-core/src/commonMain/kotlin/kscience/kmath/expressions) : Functional Expressions + - [domains](kmath-core/src/commonMain/kotlin/kscience/kmath/domains) : Domains + - [autodif](kmath-core/src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt) : Automatic differentiation + +### [kmath-coroutines](kmath-coroutines) +### [kmath-viktor](kmath-viktor) +### [kmath-prob](kmath-prob) +### [kmath-ast](kmath-ast) +### [kmath-commons](kmath-commons) +### [kmath-memory](kmath-memory) +### [kmath-for-real](kmath-for-real) +### [kmath-functions](kmath-functions) +### [kmath-dimensions](kmath-dimensions) +### [kmath-histograms](kmath-histograms) +### [kmath-geometry](kmath-geometry) + + ## Multi-platform support KMath is developed as a multi-platform library, which means that most of interfaces are declared in the [common module](kmath-core/src/commonMain). Implementation is also done in the common module wherever possible. In some cases, features are delegated to platform-specific implementations even if they could be done in the common module for performance reasons. Currently, the JVM is the main focus of development, however Kotlin/Native and Kotlin/JS contributions are also welcome. @@ -84,8 +107,8 @@ repositories{ } dependencies{ - api("kscience.kmath:kmath-core:${kmathVersion}") - //api("kscience.kmath:kmath-core-jvm:${kmathVersion}") for jvm-specific version + api("kscience.kmath:kmath-core:0.2.0-dev-1") + //api("kscience.kmath:kmath-core-jvm:0.2.0-dev-1") for jvm-specific version } ``` diff --git a/build.gradle.kts b/build.gradle.kts index 838a05771..ed3317bf8 100644 --- a/build.gradle.kts +++ b/build.gradle.kts @@ -18,4 +18,83 @@ allprojects { version = kmathVersion } -subprojects { if (name.startsWith("kmath")) apply(plugin = "ru.mipt.npm.publish") } +subprojects { + if (name.startsWith("kmath")) apply() +} + +/** + * TODO move to base plugin + */ +val generateReadme by tasks.creating { + group = "documentation" + + fun List>.generateFeatureString(pathPrefix: String): String = buildString { + this@generateFeatureString.forEach { feature -> + val id by feature + val description by feature + val ref by feature + appendln(" - [$id]($pathPrefix$ref) : $description") + } + } + + doLast { + val reader = groovy.json.JsonSlurper() + val projects = HashMap>() + + project.subprojects { + var properties: Map = mapOf( + "name" to this.name, + "group" to this.group, + "version" to this.version + ) + + val projectProperties = this.file("docs/kscience-module.json") + + @Suppress("UNCHECKED_CAST") + if (projectProperties.exists()) { + val customProperties: Map = + (reader.parse(projectProperties) as? Map ?: emptyMap()).withDefault { null } + val features: List>? by customProperties + val featureString = features?.generateFeatureString("") + properties = customProperties + properties + ("featuresString" to featureString) + } + + projects[name] = properties.withDefault { null } + + val readmeStub = this.file("docs/README-STUB.md") + if (readmeStub.exists()) { + val readmeFile = this.file("README.md") + readmeFile.writeText( + groovy.text.SimpleTemplateEngine().createTemplate(readmeStub).make(properties).toString() + ) + } + } + + val rootReadmeStub = project.file("docs/README-STUB.md") + + val modulesString = buildString { + projects.filter { it.key.startsWith("kmath") }.forEach { (name, properties) -> + appendln("### [$name]($name)") + val features: List>? by properties + if (features != null) { + appendln(features!!.generateFeatureString("$name/")) + } + } + } + + val rootReadmeProperties: Map = mapOf( + "name" to project.name, + "group" to project.group, + "version" to project.version, + "modulesString" to modulesString + ) + + if (rootReadmeStub.exists()) { + val readmeFile = project.file("README.md") + readmeFile.writeText( + groovy.text.SimpleTemplateEngine().createTemplate(rootReadmeStub).make(rootReadmeProperties).toString() + ) + } + + } +} \ No newline at end of file diff --git a/doc/features.md b/doc/features.md deleted file mode 100644 index 0f2c4203f..000000000 --- a/doc/features.md +++ /dev/null @@ -1,14 +0,0 @@ -# Features - -* [Algebra](./algebra.md) - [Context-based](./contexts.md) operations on different primitives and structures. - -* [NDStructures](./nd-structure.md) - -* [Linear algebra](./linear.md) - Matrices, operations and linear equations solving. To be moved to separate module. Currently supports basic -api and multiple library back-ends. - -* [Histograms](./histograms.md) - Multidimensional histogram calculation and operations. - -* [Expressions](./expressions.md) - -* Commons math integration diff --git a/docs/README-STUB.md b/docs/README-STUB.md new file mode 100644 index 000000000..1c6a1f6e0 --- /dev/null +++ b/docs/README-STUB.md @@ -0,0 +1,110 @@ +[![JetBrains Research](https://jb.gg/badges/research.svg)](https://confluence.jetbrains.com/display/ALL/JetBrains+on+GitHub) +[![DOI](https://zenodo.org/badge/129486382.svg)](https://zenodo.org/badge/latestdoi/129486382) + +![Gradle build](https://github.com/mipt-npm/kmath/workflows/Gradle%20build/badge.svg) + +Bintray: [ ![Download](https://api.bintray.com/packages/mipt-npm/kscience/kmath-core/images/download.svg) ](https://bintray.com/mipt-npm/kscience/kmath-core/_latestVersion) + +Bintray-dev: [ ![Download](https://api.bintray.com/packages/mipt-npm/dev/kmath-core/images/download.svg) ](https://bintray.com/mipt-npm/dev/kmath-core/_latestVersion) + +# KMath +Could be pronounced as `key-math`. +The Kotlin MATHematics library is intended as a Kotlin-based analog to Python's `numpy` library. In contrast to `numpy` and `scipy` it is modular and has a lightweight core. + +## Publications +* [A conceptual article about context-oriented design](https://proandroiddev.com/an-introduction-context-oriented-programming-in-kotlin-2e79d316b0a2) +* [Another article about context-oriented design](https://proandroiddev.com/diving-deeper-into-context-oriented-programming-in-kotlin-3ecb4ec38814) +* [ACAT 2019 conference paper](https://aip.scitation.org/doi/abs/10.1063/1.5130103) + +# Goal +* Provide a flexible and powerful API to work with mathematics abstractions in Kotlin-multiplatform (JVM and JS for now and Native in future). +* Provide basic multiplatform implementations for those abstractions (without significant performance optimization). +* Provide bindings and wrappers with those abstractions for popular optimized platform libraries. + +## Non-goals +* Be like Numpy. It was the idea at the beginning, but we decided that we can do better in terms of API. +* Provide best performance out of the box. We have specialized libraries for that. Need only API wrappers for them. +* Cover all cases as immediately and in one bundle. We will modularize everything and add new features gradually. +* Provide specialized behavior in the core. API is made generic on purpose, so one needs to specialize for types, like for `Double` in the core. For that we will have specialization modules like `for-real`, which will give better experience for those, who want to work with specific types. + +## Features + +Actual feature list is [here](docs/features.md) + +* **Algebra** + * Algebraic structures like rings, spaces and field (**TODO** add example to wiki) + * Basic linear algebra operations (sums, products, etc.), backed by the `Space` API. + * Complex numbers backed by the `Field` API (meaning that they will be usable in any structure like vectors and N-dimensional arrays). + * Advanced linear algebra operations like matrix inversion and LU decomposition. + +* **Array-like structures** Full support of many-dimensional array-like structures +including mixed arithmetic operations and function operations over arrays and numbers (with the added benefit of static type checking). + +* **Expressions** By writing a single mathematical expression +once, users will be able to apply different types of objects to the expression by providing a context. Expressions +can be used for a wide variety of purposes from high performance calculations to code generation. + +* **Histograms** Fast multi-dimensional histograms. + +* **Streaming** Streaming operations on mathematical objects and objects buffers. + +* **Type-safe dimensions** Type-safe dimensions for matrix operations. + +* **Commons-math wrapper** It is planned to gradually wrap most parts of [Apache commons-math](http://commons.apache.org/proper/commons-math/) + library in Kotlin code and maybe rewrite some parts to better suit the Kotlin programming paradigm, however there is no fixed roadmap for that. Feel free + to submit a feature request if you want something to be done first. + +## Planned features + +* **Messaging** A mathematical notation to support multi-language and multi-node communication for mathematical tasks. + +* **Array statistics** + +* **Integration** Univariate and multivariate integration framework. + +* **Probability and distributions** + +* **Fitting** Non-linear curve fitting facilities + +## Modules + +$modulesString + +## Multi-platform support + +KMath is developed as a multi-platform library, which means that most of interfaces are declared in the [common module](kmath-core/src/commonMain). Implementation is also done in the common module wherever possible. In some cases, features are delegated to platform-specific implementations even if they could be done in the common module for performance reasons. Currently, the JVM is the main focus of development, however Kotlin/Native and Kotlin/JS contributions are also welcome. + +## Performance + +Calculation performance is one of major goals of KMath in the future, but in some cases it is not possible to achieve both performance and flexibility. We expect to focus on creating convenient universal API first and then work on increasing performance for specific cases. We expect the worst KMath benchmarks will perform better than native Python, but worse than optimized native/SciPy (mostly due to boxing operations on primitive numbers). The best performance of optimized parts could be better than SciPy. + +### Dependency + +Release artifacts are accessible from bintray with following configuration (see documentation for [kotlin-multiplatform](https://kotlinlang.org/docs/reference/multiplatform.html) form more details): + +```kotlin +repositories{ + maven("https://dl.bintray.com/mipt-npm/kscience") +} + +dependencies{ + api("kscience.kmath:kmath-core:$version") + //api("kscience.kmath:kmath-core-jvm:$version") for jvm-specific version +} +``` + +Gradle `6.0+` is required for multiplatform artifacts. + +### Development + +Development builds are accessible from the reposirtory +```kotlin +repositories{ + maven("https://dl.bintray.com/mipt-npm/dev") +} +``` +with the same artifact names. + +## Contributing + +The project requires a lot of additional work. Please feel free to contribute in any way and propose new features. diff --git a/doc/algebra.md b/docs/algebra.md similarity index 100% rename from doc/algebra.md rename to docs/algebra.md diff --git a/doc/buffers.md b/docs/buffers.md similarity index 100% rename from doc/buffers.md rename to docs/buffers.md diff --git a/doc/codestyle.md b/docs/codestyle.md similarity index 100% rename from doc/codestyle.md rename to docs/codestyle.md diff --git a/doc/contexts.md b/docs/contexts.md similarity index 100% rename from doc/contexts.md rename to docs/contexts.md diff --git a/doc/expressions.md b/docs/expressions.md similarity index 100% rename from doc/expressions.md rename to docs/expressions.md diff --git a/docs/features.md b/docs/features.md new file mode 100644 index 000000000..1068a4417 --- /dev/null +++ b/docs/features.md @@ -0,0 +1,14 @@ +# Features + +* [Algebra](algebra.md) - [Context-based](contexts.md) operations on different primitives and structures. + +* [NDStructures](nd-structure.md) + +* [Linear algebra](linear.md) - Matrices, operations and linear equations solving. To be moved to separate module. Currently supports basic +api and multiple library back-ends. + +* [Histograms](histograms.md) - Multidimensional histogram calculation and operations. + +* [Expressions](expressions.md) + +* Commons math integration diff --git a/doc/histograms.md b/docs/histograms.md similarity index 100% rename from doc/histograms.md rename to docs/histograms.md diff --git a/doc/linear.md b/docs/linear.md similarity index 100% rename from doc/linear.md rename to docs/linear.md diff --git a/doc/nd-structure.md b/docs/nd-structure.md similarity index 100% rename from doc/nd-structure.md rename to docs/nd-structure.md diff --git a/kmath-core/README.md b/kmath-core/docs/README-STUB.md similarity index 62% rename from kmath-core/README.md rename to kmath-core/docs/README-STUB.md index 9d05331f9..c2e8f661f 100644 --- a/kmath-core/README.md +++ b/kmath-core/docs/README-STUB.md @@ -1,16 +1,10 @@ # The Core Module (`kmath-core`) The core features of KMath: - -- Algebraic structures: contexts and elements. -- ND structures. -- Buffers. -- Functional Expressions. -- Domains. -- Automatic differentiation. +$featuresString > #### Artifact: -> This module is distributed in the artifact `kscience.kmath:kmath-core:0.1.4-dev-8`. +> This module artifact: `$group:kmath-core:$version`. > > **Gradle:** > @@ -22,7 +16,7 @@ The core features of KMath: > } > > dependencies { -> implementation 'kscience.kmath:kmath-core:0.1.4-dev-8' +> implementation '$group:kmath-core:$version' > } > ``` > **Gradle Kotlin DSL:** @@ -35,6 +29,6 @@ The core features of KMath: > } > > dependencies { -> implementation("kscience.kmath:kmath-core:0.1.4-dev-8") +> implementation("$group:kmath-core:$version") > } > ``` diff --git a/kmath-core/docs/kscience-module.json b/kmath-core/docs/kscience-module.json new file mode 100644 index 000000000..c7ac4f082 --- /dev/null +++ b/kmath-core/docs/kscience-module.json @@ -0,0 +1,36 @@ +{ + "description": "Core classes, algebra definitions, basic linear algebra", + "maturity": "development", + "features": [ + { + "id": "algebras", + "description": "Algebraic structures: contexts and elements", + "ref": "src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt" + }, + { + "id": "nd", + "description": "Many-dimensional structures", + "ref": "src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt" + }, + { + "id": "buffers", + "description": "One-dimensional structure", + "ref": "src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt" + }, + { + "id": "expressions", + "description": "Functional Expressions", + "ref": "src/commonMain/kotlin/kscience/kmath/expressions" + }, + { + "id": "domains", + "description": "Domains", + "ref": "src/commonMain/kotlin/kscience/kmath/domains" + }, + { + "id": "autodif", + "description": "Automatic differentiation", + "ref": "src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt" + } + ] +} \ No newline at end of file diff --git a/settings.gradle.kts b/settings.gradle.kts index c0d729c32..fe0ee6c5d 100644 --- a/settings.gradle.kts +++ b/settings.gradle.kts @@ -32,9 +32,8 @@ include( ":kmath-histograms", ":kmath-commons", ":kmath-viktor", - ":kmath-koma", ":kmath-prob", - ":kmath-io", +// ":kmath-io", ":kmath-dimensions", ":kmath-for-real", ":kmath-geometry", From 1e50587da4cf4f88387bf8bc2895b4a27d32d309 Mon Sep 17 00:00:00 2001 From: Alexander Nozik Date: Mon, 21 Sep 2020 15:53:11 +0300 Subject: [PATCH 25/26] Update CHANGELOG.md --- CHANGELOG.md | 1 + kmath-core/README.md | 40 ++++++++++++++++++++++++++++++++++++++++ 2 files changed, 41 insertions(+) create mode 100644 kmath-core/README.md diff --git a/CHANGELOG.md b/CHANGELOG.md index bd9d0c2aa..e017fe565 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,6 +5,7 @@ - `fun` annotation for SAM interfaces in library - Explicit `public` visibility for all public APIs - Better trigonometric and hyperbolic functions for `AutoDiffField` (https://github.com/mipt-npm/kmath/pull/140). +- Automatic documentation generation for features (#139) ### Changed - Package changed from `scientifik` to `kscience.kmath`. diff --git a/kmath-core/README.md b/kmath-core/README.md new file mode 100644 index 000000000..1fcd9edc9 --- /dev/null +++ b/kmath-core/README.md @@ -0,0 +1,40 @@ +# The Core Module (`kmath-core`) + +The core features of KMath: + - [algebras](src/commonMain/kotlin/kscience/kmath/operations/Algebra.kt) : Algebraic structures: contexts and elements + - [nd](src/commonMain/kotlin/kscience/kmath/structures/NDStructure.kt) : Many-dimensional structures + - [buffers](src/commonMain/kotlin/kscience/kmath/structures/Buffers.kt) : One-dimensional structure + - [expressions](src/commonMain/kotlin/kscience/kmath/expressions) : Functional Expressions + - [domains](src/commonMain/kotlin/kscience/kmath/domains) : Domains + - [autodif](src/commonMain/kotlin/kscience/kmath/misc/AutoDiff.kt) : Automatic differentiation + + +> #### Artifact: +> This module artifact: `kscience.kmath:kmath-core:0.2.0-dev-1`. +> +> **Gradle:** +> +> ```gradle +> repositories { +> maven { url 'https://dl.bintray.com/mipt-npm/kscience' } +> maven { url 'https://dl.bintray.com/mipt-npm/dev' } +> maven { url https://dl.bintray.com/hotkeytlt/maven' } +> } +> +> dependencies { +> implementation 'kscience.kmath:kmath-core:0.2.0-dev-1' +> } +> ``` +> **Gradle Kotlin DSL:** +> +> ```kotlin +> repositories { +> maven("https://dl.bintray.com/mipt-npm/kscience") +> maven("https://dl.bintray.com/mipt-npm/dev") +> maven("https://dl.bintray.com/hotkeytlt/maven") +> } +> +> dependencies { +> implementation("kscience.kmath:kmath-core:0.2.0-dev-1") +> } +> ``` From 8014b3df0bec4acc3e9d0dabbe6422b325329968 Mon Sep 17 00:00:00 2001 From: Iaroslav Postovalov Date: Fri, 25 Sep 2020 20:49:08 +0700 Subject: [PATCH 26/26] Simplify asm.kt --- .../jvmMain/kotlin/kscience/kmath/asm/asm.kt | 56 +++++++++---------- 1 file changed, 27 insertions(+), 29 deletions(-) diff --git a/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt index edfe7f01d..53425e7e3 100644 --- a/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt +++ b/kmath-ast/src/jvmMain/kotlin/kscience/kmath/asm/asm.kt @@ -19,39 +19,37 @@ import kotlin.reflect.KClass * @author Alexander Nozik */ public fun MST.compileWith(type: KClass, algebra: Algebra): Expression { - fun AsmBuilder.visit(node: MST) { - when (node) { - is MST.Symbolic -> { - val symbol = try { - algebra.symbol(node.value) - } catch (ignored: Throwable) { - null - } - - if (symbol != null) - loadTConstant(symbol) - else - loadVariable(node.value) + fun AsmBuilder.visit(node: MST): Unit = when (node) { + is MST.Symbolic -> { + val symbol = try { + algebra.symbol(node.value) + } catch (ignored: Throwable) { + null } - is MST.Numeric -> loadNumeric(node.value) + if (symbol != null) + loadTConstant(symbol) + else + loadVariable(node.value) + } - is MST.Unary -> buildAlgebraOperationCall( - context = algebra, - name = node.operation, - fallbackMethodName = "unaryOperation", - parameterTypes = arrayOf(MstType.fromMst(node.value)) - ) { visit(node.value) } + is MST.Numeric -> loadNumeric(node.value) - is MST.Binary -> buildAlgebraOperationCall( - context = algebra, - name = node.operation, - fallbackMethodName = "binaryOperation", - parameterTypes = arrayOf(MstType.fromMst(node.left), MstType.fromMst(node.right)) - ) { - visit(node.left) - visit(node.right) - } + is MST.Unary -> buildAlgebraOperationCall( + context = algebra, + name = node.operation, + fallbackMethodName = "unaryOperation", + parameterTypes = arrayOf(MstType.fromMst(node.value)) + ) { visit(node.value) } + + is MST.Binary -> buildAlgebraOperationCall( + context = algebra, + name = node.operation, + fallbackMethodName = "binaryOperation", + parameterTypes = arrayOf(MstType.fromMst(node.left), MstType.fromMst(node.right)) + ) { + visit(node.left) + visit(node.right) } }