Cleanup after nd optimization phase II
This commit is contained in:
parent
05d15d5b34
commit
876a363e0b
@ -17,7 +17,7 @@ open class NDFieldBenchmark {
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@Benchmark
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fun autoElementAdd() {
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var res = bufferedField.run { one.toElement() }
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var res = genericField.one
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repeat(n) {
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res += 1.0
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}
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@ -16,54 +16,54 @@ fun main(args: Array<String>) {
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//A generic boxing field. It should be used for objects, not primitives.
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val genericField = NDField.buffered(intArrayOf(dim, dim), RealField)
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val autoTime = measureTimeMillis {
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autoField.run {
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var res = one
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repeat(n) {
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res += 1.0
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}
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}
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}
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println("Buffered addition completed in $autoTime millis")
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val elementTime = measureTimeMillis {
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var res = genericField.one
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repeat(n) {
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res += 1.0
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}
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}
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println("Element addition completed in $elementTime millis")
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val specializedTime = measureTimeMillis {
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specializedField.run {
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var res:NDBuffer<Double> = one
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repeat(n) {
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res += 1.0
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}
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}
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}
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println("Specialized addition completed in $specializedTime millis")
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val lazyTime = measureTimeMillis {
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lazyField.run {
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val res = one.map {
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var c = 0.0
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repeat(n) {
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c += 1.0
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}
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c
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}
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res.elements().forEach { it.second }
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}
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}
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println("Lazy addition completed in $lazyTime millis")
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//
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// val autoTime = measureTimeMillis {
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// autoField.run {
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// var res = one
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// repeat(n) {
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// res += 1.0
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// }
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// }
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// }
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//
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// println("Buffered addition completed in $autoTime millis")
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//
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// val elementTime = measureTimeMillis {
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// var res = genericField.one
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// repeat(n) {
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// res += 1.0
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// }
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// }
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//
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// println("Element addition completed in $elementTime millis")
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//
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// val specializedTime = measureTimeMillis {
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// specializedField.run {
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// var res:NDBuffer<Double> = one
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// repeat(n) {
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// res += 1.0
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// }
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// }
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// }
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//
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// println("Specialized addition completed in $specializedTime millis")
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//
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//
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// val lazyTime = measureTimeMillis {
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// lazyField.run {
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// val res = one.map {
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// var c = 0.0
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// repeat(n) {
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// c += 1.0
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// }
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// c
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// }
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//
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// res.elements().forEach { it.second }
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// }
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// }
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//
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// println("Lazy addition completed in $lazyTime millis")
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val genericTime = measureTimeMillis {
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//genericField.run(action)
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@ -33,9 +33,9 @@ interface Space<T> {
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operator fun T.times(k: Number) = multiply(this, k.toDouble())
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operator fun T.div(k: Number) = multiply(this, 1.0 / k.toDouble())
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operator fun Number.times(b: T) = b * this
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fun Iterable<T>.sum(): T = fold(zero) { left, right -> left + right }
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fun Iterable<T>.sum(): T = fold(zero) { left, right -> add(left,right) }
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fun Sequence<T>.sum(): T = fold(zero) { left, right -> left + right }
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fun Sequence<T>.sum(): T = fold(zero) { left, right -> add(left, right) }
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}
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/**
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@ -2,13 +2,20 @@ package scientifik.kmath.operations
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/**
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* The generic mathematics elements which is able to store its context
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* @param S the type of mathematical context for this element
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* @param T the type of space operation results
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* @param I self type of the element. Needed for static type checking
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* @param C the type of mathematical context for this element
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*/
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interface MathElement<S> {
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interface MathElement<C> {
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/**
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* The context this element belongs to
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*/
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val context: S
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val context: C
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}
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interface MathWrapper<T, I> {
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fun unwrap(): T
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fun T.wrap(): I
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}
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/**
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@ -17,13 +24,7 @@ interface MathElement<S> {
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* @param I self type of the element. Needed for static type checking
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* @param S the type of space
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*/
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interface SpaceElement<T, I : SpaceElement<T, I, S>, S : Space<T>> : MathElement<S> {
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/**
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* Self value. Needed for static type checking.
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*/
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fun unwrap(): T
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fun T.wrap(): I
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interface SpaceElement<T, I : SpaceElement<T, I, S>, S : Space<T>> : MathElement<S>, MathWrapper<T, I> {
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operator fun plus(b: T) = context.add(unwrap(), b).wrap()
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operator fun minus(b: T) = context.add(unwrap(), context.multiply(b, -1.0)).wrap()
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@ -35,7 +36,6 @@ interface SpaceElement<T, I : SpaceElement<T, I, S>, S : Space<T>> : MathElement
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* Ring element
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*/
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interface RingElement<T, I : RingElement<T, I, R>, R : Ring<T>> : SpaceElement<T, I, R> {
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override val context: R
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operator fun times(b: T) = context.multiply(unwrap(), b).wrap()
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}
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@ -44,6 +44,5 @@ interface RingElement<T, I : RingElement<T, I, R>, R : Ring<T>> : SpaceElement<T
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*/
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interface FieldElement<T, I : FieldElement<T, I, F>, F : Field<T>> : RingElement<T, I, F> {
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override val context: F
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operator fun div(b: T) = context.divide(unwrap(), b).wrap()
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}
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@ -32,6 +32,7 @@ inline class Real(val value: Double) : FieldElement<Double, Real, RealField> {
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/**
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* A field for double without boxing. Does not produce appropriate field element
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*/
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@Suppress("EXTENSION_SHADOWED_BY_MEMBER")
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object RealField : ExtendedField<Double>, Norm<Double, Double> {
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override val zero: Double = 0.0
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override fun add(a: Double, b: Double): Double = a + b
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@ -45,10 +46,13 @@ object RealField : ExtendedField<Double>, Norm<Double, Double> {
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override fun power(arg: Double, pow: Double): Double = arg.pow(pow)
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override fun exp(arg: Double): Double = kotlin.math.exp(arg)
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override fun ln(arg: Double): Double = kotlin.math.ln(arg)
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override fun norm(arg: Double): Double = kotlin.math.abs(arg)
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override fun Double.unaryMinus(): Double = -this
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override fun Double.minus(b: Double): Double = this - b
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}
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/**
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@ -1,15 +1,19 @@
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package scientifik.kmath.structures
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import scientifik.kmath.operations.Field
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import scientifik.kmath.operations.FieldElement
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class BufferNDField<T, F : Field<T>>(
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shape: IntArray,
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class BoxingNDField<T, F : Field<T>>(
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override val shape: IntArray,
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override val elementContext: F,
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val bufferFactory: BufferFactory<T>
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) : StridedNDField<T, F>(shape), NDField<T, F, NDBuffer<T>> {
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) : BufferedNDField<T, F> {
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override fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T> = bufferFactory(size, initializer)
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override val strides: Strides = DefaultStrides(shape)
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override fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T> =
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bufferFactory(size, initializer)
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override fun check(vararg elements: NDBuffer<T>) {
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if (!elements.all { it.strides == this.strides }) error("Element strides are not the same as context strides")
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@ -18,14 +22,14 @@ class BufferNDField<T, F : Field<T>>(
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override val zero by lazy { produce { zero } }
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override val one by lazy { produce { one } }
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override fun produce(initializer: F.(IntArray) -> T): StridedNDFieldElement<T, F> =
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StridedNDFieldElement(
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override fun produce(initializer: F.(IntArray) -> T) =
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BufferedNDFieldElement(
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this,
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buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) })
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override fun map(arg: NDBuffer<T>, transform: F.(T) -> T): StridedNDFieldElement<T, F> {
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override fun map(arg: NDBuffer<T>, transform: F.(T) -> T): BufferedNDFieldElement<T, F> {
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check(arg)
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return StridedNDFieldElement(
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return BufferedNDFieldElement(
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this,
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buildBuffer(arg.strides.linearSize) { offset -> elementContext.transform(arg.buffer[offset]) })
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}
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@ -33,9 +37,9 @@ class BufferNDField<T, F : Field<T>>(
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override fun mapIndexed(
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arg: NDBuffer<T>,
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transform: F.(index: IntArray, T) -> T
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): StridedNDFieldElement<T, F> {
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): BufferedNDFieldElement<T, F> {
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check(arg)
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return StridedNDFieldElement(
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return BufferedNDFieldElement(
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this,
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buildBuffer(arg.strides.linearSize) { offset ->
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elementContext.transform(
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@ -49,10 +53,13 @@ class BufferNDField<T, F : Field<T>>(
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a: NDBuffer<T>,
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b: NDBuffer<T>,
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transform: F.(T, T) -> T
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): StridedNDFieldElement<T, F> {
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): BufferedNDFieldElement<T, F> {
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check(a, b)
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return StridedNDFieldElement(
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return BufferedNDFieldElement(
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this,
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buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) })
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}
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override fun NDBuffer<T>.toElement(): FieldElement<NDBuffer<T>, *, out BufferedNDField<T, F>> =
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BufferedNDFieldElement(this@BoxingNDField, buffer)
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}
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@ -0,0 +1,45 @@
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package scientifik.kmath.structures
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import scientifik.kmath.operations.*
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interface BufferedNDAlgebra<T, C>: NDAlgebra<T, C, NDBuffer<T>>{
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val strides: Strides
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fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T>
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override fun check(vararg elements: NDBuffer<T>) {
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if (!elements.all { it.strides == this.strides }) error("Strides mismatch")
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}
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/**
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* Convert any [NDStructure] to buffered structure using strides from this context.
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* If the structure is already [NDBuffer], conversion is free. If not, it could be expensive because iteration over indexes
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*
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* If the argument is [NDBuffer] with different strides structure, the new element will be produced.
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*/
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fun NDStructure<T>.toBuffer(): NDBuffer<T> {
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return if (this is NDBuffer<T> && this.strides == this@BufferedNDAlgebra.strides) {
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this
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} else {
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produce { index -> get(index) }
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}
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}
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/**
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* Convert a buffer to element of this algebra
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*/
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fun NDBuffer<T>.toElement(): MathElement<out BufferedNDAlgebra<T, C>>
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}
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interface BufferedNDSpace<T, S : Space<T>> : NDSpace<T, S, NDBuffer<T>>, BufferedNDAlgebra<T,S> {
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override fun NDBuffer<T>.toElement(): SpaceElement<NDBuffer<T>, *, out BufferedNDSpace<T, S>>
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}
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interface BufferedNDRing<T, R : Ring<T>> : NDRing<T, R, NDBuffer<T>>, BufferedNDSpace<T, R> {
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override fun NDBuffer<T>.toElement(): RingElement<NDBuffer<T>, *, out BufferedNDRing<T, R>>
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}
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interface BufferedNDField<T, F : Field<T>> : NDField<T, F, NDBuffer<T>>, BufferedNDRing<T, F> {
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override fun NDBuffer<T>.toElement(): FieldElement<NDBuffer<T>, *, out BufferedNDField<T, F>>
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}
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@ -0,0 +1,88 @@
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package scientifik.kmath.structures
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import scientifik.kmath.operations.*
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/**
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* Base interface for an element with context, containing strides
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*/
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interface BufferedNDElement<T, C> : NDBuffer<T>, NDElement<T, C, NDBuffer<T>> {
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override val context: BufferedNDAlgebra<T, C>
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override val strides get() = context.strides
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override val shape: IntArray get() = context.shape
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}
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class BufferedNDSpaceElement<T, S : Space<T>>(
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override val context: BufferedNDSpace<T, S>,
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override val buffer: Buffer<T>
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) : BufferedNDElement<T, S>, SpaceElement<NDBuffer<T>, BufferedNDSpaceElement<T, S>, BufferedNDSpace<T, S>> {
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override fun unwrap(): NDBuffer<T> = this
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override fun NDBuffer<T>.wrap(): BufferedNDSpaceElement<T, S> {
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context.check(this)
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return BufferedNDSpaceElement(context, buffer)
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}
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}
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class BufferedNDRingElement<T, R : Ring<T>>(
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override val context: BufferedNDRing<T, R>,
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override val buffer: Buffer<T>
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) : BufferedNDElement<T, R>, RingElement<NDBuffer<T>, BufferedNDRingElement<T, R>, BufferedNDRing<T, R>> {
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override fun unwrap(): NDBuffer<T> = this
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override fun NDBuffer<T>.wrap(): BufferedNDRingElement<T, R> {
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context.check(this)
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return BufferedNDRingElement(context, buffer)
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}
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}
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class BufferedNDFieldElement<T, F : Field<T>>(
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override val context: BufferedNDField<T, F>,
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override val buffer: Buffer<T>
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) : BufferedNDElement<T, F>, FieldElement<NDBuffer<T>, BufferedNDFieldElement<T, F>, BufferedNDField<T, F>> {
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override fun unwrap(): NDBuffer<T> = this
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override fun NDBuffer<T>.wrap(): BufferedNDFieldElement<T, F> {
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context.check(this)
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return BufferedNDFieldElement(context, buffer)
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}
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}
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/**
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* Element by element application of any operation on elements to the whole array. Just like in numpy
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*/
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operator fun <T : Any, F : Field<T>> Function1<T, T>.invoke(ndElement: BufferedNDElement<T, F>) =
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ndElement.context.run { map(ndElement) { invoke(it) }.toElement() }
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/* plus and minus */
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/**
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* Summation operation for [BufferedNDElement] and single element
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*/
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operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.plus(arg: T) =
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context.map(this) { it + arg }.wrap()
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/**
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* Subtraction operation between [BufferedNDElement] and single element
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*/
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operator fun <T : Any, F : Space<T>> BufferedNDElement<T, F>.minus(arg: T) =
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context.map(this) { it - arg }.wrap()
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/* prod and div */
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/**
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* Product operation for [BufferedNDElement] and single element
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*/
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operator fun <T : Any, F : Ring<T>> BufferedNDElement<T, F>.times(arg: T) =
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context.map(this) { it * arg }.wrap()
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/**
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* Division operation between [BufferedNDElement] and single element
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*/
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operator fun <T : Any, F : Field<T>> BufferedNDElement<T, F>.div(arg: T) =
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context.map(this) { it / arg }.wrap()
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@ -30,7 +30,7 @@ interface Buffer<T> {
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* Create most appropriate immutable buffer for given type avoiding boxing wherever possible
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*/
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@Suppress("UNCHECKED_CAST")
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inline fun <reified T : Any> auto(size: Int, initializer: (Int) -> T): Buffer<T> {
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inline fun <reified T : Any> auto(size: Int, crossinline initializer: (Int) -> T): Buffer<T> {
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return when (T::class) {
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Double::class -> DoubleBuffer(DoubleArray(size) { initializer(it) as Double }) as Buffer<T>
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Short::class -> ShortBuffer(ShortArray(size) { initializer(it) as Short }) as Buffer<T>
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@ -40,8 +40,10 @@ interface Buffer<T> {
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}
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}
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val DoubleBufferFactory: BufferFactory<Double> = { size, initializer -> DoubleBuffer(DoubleArray(size, initializer)) }
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val ShortBufferFactory: BufferFactory<Short> = { size, initializer -> ShortBuffer(ShortArray(size, initializer)) }
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val DoubleBufferFactory: BufferFactory<Double> =
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{ size, initializer -> DoubleBuffer(DoubleArray(size, initializer)) }
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val ShortBufferFactory: BufferFactory<Short> =
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{ size, initializer -> ShortBuffer(ShortArray(size, initializer)) }
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val IntBufferFactory: BufferFactory<Int> = { size, initializer -> IntBuffer(IntArray(size, initializer)) }
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val LongBufferFactory: BufferFactory<Long> = { size, initializer -> LongBuffer(LongArray(size, initializer)) }
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}
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@ -11,40 +11,79 @@ import scientifik.kmath.operations.Space
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class ShapeMismatchException(val expected: IntArray, val actual: IntArray) : RuntimeException()
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interface NDSpace<T, S : Space<T>, N : NDStructure<T>> : Space<N> {
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/**
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* The base interface for all nd-algebra implementations
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* @param T the type of nd-structure element
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* @param C the type of the context
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* @param N the type of the structure
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*/
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interface NDAlgebra<T, C, N : NDStructure<T>> {
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val shape: IntArray
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val elementContext: S
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val elementContext: C
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/**
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* Produce a new [N] structure using given initializer function
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*/
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fun produce(initializer: S.(IntArray) -> T): N
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fun produce(initializer: C.(IntArray) -> T): N
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fun map(arg: N, transform: S.(T) -> T): N
|
||||
fun mapIndexed(arg: N, transform: S.(index: IntArray, T) -> T): N
|
||||
fun combine(a: N, b: N, transform: S.(T, T) -> T): N
|
||||
/**
|
||||
* Map elements from one structure to another one
|
||||
*/
|
||||
fun map(arg: N, transform: C.(T) -> T): N
|
||||
|
||||
/**
|
||||
* Map indexed elements
|
||||
*/
|
||||
fun mapIndexed(arg: N, transform: C.(index: IntArray, T) -> T): N
|
||||
|
||||
/**
|
||||
* Combine two structures into one
|
||||
*/
|
||||
fun combine(a: N, b: N, transform: C.(T, T) -> T): N
|
||||
|
||||
/**
|
||||
* Check if given elements are consistent with this context
|
||||
*/
|
||||
fun check(vararg elements: N) {
|
||||
elements.forEach {
|
||||
if (!shape.contentEquals(it.shape)) {
|
||||
throw ShapeMismatchException(shape, it.shape)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* element-by-element invoke a function working on [T] on a [NDStructure]
|
||||
*/
|
||||
operator fun Function1<T, T>.invoke(structure: N) = map(structure) { value -> this@invoke(value) }
|
||||
}
|
||||
|
||||
/**
|
||||
* An nd-space over element space
|
||||
*/
|
||||
interface NDSpace<T, S : Space<T>, N : NDStructure<T>> : Space<N>, NDAlgebra<T, S, N> {
|
||||
/**
|
||||
* Element-by-element addition
|
||||
*/
|
||||
override fun add(a: N, b: N): N =
|
||||
combine(a, b) { aValue, bValue -> aValue + bValue }
|
||||
combine(a, b) { aValue, bValue -> add(aValue, bValue) }
|
||||
|
||||
/**
|
||||
* Multiply all elements by constant
|
||||
*/
|
||||
override fun multiply(a: N, k: Double): N =
|
||||
map(a) { it * k }
|
||||
map(a) { multiply(it, k) }
|
||||
|
||||
operator fun Function1<T, T>.invoke(structure: N) = map(structure) { value -> this@invoke(value) }
|
||||
operator fun N.plus(arg: T) = map(this) { value -> elementContext.run { arg + value } }
|
||||
operator fun N.minus(arg: T) = map(this) { value -> elementContext.run { arg - value } }
|
||||
|
||||
operator fun T.plus(arg: N) = arg + this
|
||||
operator fun T.minus(arg: N) = arg - this
|
||||
operator fun N.plus(arg: T) = map(this) { value -> add(arg, value) }
|
||||
operator fun N.minus(arg: T) = map(this) { value -> add(arg, -value) }
|
||||
|
||||
operator fun T.plus(arg: N) = map(arg) { value -> add(this@plus, value) }
|
||||
operator fun T.minus(arg: N) = map(arg) { value -> add(-this@minus, value) }
|
||||
}
|
||||
|
||||
/**
|
||||
* An nd-ring over element ring
|
||||
*/
|
||||
interface NDRing<T, R : Ring<T>, N : NDStructure<T>> : Ring<N>, NDSpace<T, R, N> {
|
||||
|
||||
/**
|
||||
@ -53,16 +92,16 @@ interface NDRing<T, R : Ring<T>, N : NDStructure<T>> : Ring<N>, NDSpace<T, R, N>
|
||||
override fun multiply(a: N, b: N): N =
|
||||
combine(a, b) { aValue, bValue -> aValue * bValue }
|
||||
|
||||
operator fun N.times(arg: T) = map(this) { value -> elementContext.run { arg * value } }
|
||||
operator fun T.times(arg: N) = arg * this
|
||||
operator fun N.times(arg: T) = map(this) { value -> multiply(arg, value) }
|
||||
operator fun T.times(arg: N) = map(arg) { value -> multiply(this@times, value) }
|
||||
}
|
||||
|
||||
/**
|
||||
* Field for n-dimensional arrays.
|
||||
* Field for n-dimensional structures.
|
||||
* @param shape - the list of dimensions of the array
|
||||
* @param elementField - operations field defined on individual array element
|
||||
* @param T - the type of the element contained in ND structure
|
||||
* @param F - field over structure elements
|
||||
* @param F - field of structure elements
|
||||
* @param R - actual nd-element type of this field
|
||||
*/
|
||||
interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F, N> {
|
||||
@ -73,17 +112,9 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F,
|
||||
override fun divide(a: N, b: N): N =
|
||||
combine(a, b) { aValue, bValue -> aValue / bValue }
|
||||
|
||||
operator fun N.div(arg: T) = map(this) { value -> elementContext.run { arg / value } }
|
||||
operator fun N.div(arg: T) = map(this) { value -> arg / value }
|
||||
operator fun T.div(arg: N) = arg / this
|
||||
|
||||
fun check(vararg elements: N) {
|
||||
elements.forEach {
|
||||
if (!shape.contentEquals(it.shape)) {
|
||||
throw ShapeMismatchException(shape, it.shape)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
companion object {
|
||||
/**
|
||||
* Create a nd-field for [Double] values
|
||||
@ -94,16 +125,16 @@ interface NDField<T, F : Field<T>, N : NDStructure<T>> : Field<N>, NDRing<T, F,
|
||||
* Create a nd-field with boxing generic buffer
|
||||
*/
|
||||
fun <T : Any, F : Field<T>> buffered(shape: IntArray, field: F) =
|
||||
BufferNDField(shape, field, Buffer.Companion::boxing)
|
||||
BoxingNDField(shape, field, Buffer.Companion::boxing)
|
||||
|
||||
/**
|
||||
* Create a most suitable implementation for nd-field using reified class.
|
||||
*/
|
||||
@Suppress("UNCHECKED_CAST")
|
||||
inline fun <reified T : Any, F : Field<T>> auto(shape: IntArray, field: F): StridedNDField<T, F> =
|
||||
inline fun <reified T : Any, F : Field<T>> auto(shape: IntArray, field: F): BufferedNDField<T, F> =
|
||||
when {
|
||||
T::class == Double::class -> real(shape) as StridedNDField<T, F>
|
||||
else -> BufferNDField(shape, field, Buffer.Companion::auto)
|
||||
T::class == Double::class -> real(shape) as BufferedNDField<T, F>
|
||||
else -> BoxingNDField(shape, field, Buffer.Companion::auto)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
@ -1,16 +1,21 @@
|
||||
package scientifik.kmath.structures
|
||||
|
||||
import scientifik.kmath.operations.Field
|
||||
import scientifik.kmath.operations.FieldElement
|
||||
import scientifik.kmath.operations.RealField
|
||||
import scientifik.kmath.operations.Ring
|
||||
import scientifik.kmath.operations.Space
|
||||
|
||||
|
||||
interface NDElement<T, S : Space<T>> : NDStructure<T> {
|
||||
val elementField: S
|
||||
interface NDElement<T, C, N : NDStructure<T>> : NDStructure<T> {
|
||||
|
||||
fun mapIndexed(transform: S.(index: IntArray, T) -> T): NDElement<T, S>
|
||||
fun map(action: S.(T) -> T) = mapIndexed { _, value -> action(value) }
|
||||
val context: NDAlgebra<T, C, N>
|
||||
|
||||
fun unwrap(): N
|
||||
|
||||
fun N.wrap(): NDElement<T, C, N>
|
||||
|
||||
fun mapIndexed(transform: C.(index: IntArray, T) -> T) = context.mapIndexed(unwrap(), transform).wrap()
|
||||
fun map(transform: C.(T) -> T) = context.map(unwrap(), transform).wrap()
|
||||
|
||||
companion object {
|
||||
/**
|
||||
@ -38,8 +43,8 @@ interface NDElement<T, S : Space<T>> : NDStructure<T> {
|
||||
shape: IntArray,
|
||||
field: F,
|
||||
initializer: F.(IntArray) -> T
|
||||
): StridedNDFieldElement<T, F> {
|
||||
val ndField = BufferNDField(shape, field, Buffer.Companion::boxing)
|
||||
): BufferedNDElement<T, F> {
|
||||
val ndField = BoxingNDField(shape, field, Buffer.Companion::boxing)
|
||||
return ndField.produce(initializer)
|
||||
}
|
||||
|
||||
@ -47,47 +52,46 @@ interface NDElement<T, S : Space<T>> : NDStructure<T> {
|
||||
shape: IntArray,
|
||||
field: F,
|
||||
noinline initializer: F.(IntArray) -> T
|
||||
): StridedNDFieldElement<T, F> {
|
||||
): BufferedNDFieldElement<T, F> {
|
||||
val ndField = NDField.auto(shape, field)
|
||||
return StridedNDFieldElement(ndField, ndField.produce(initializer).buffer)
|
||||
return BufferedNDFieldElement(ndField, ndField.produce(initializer).buffer)
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Element by element application of any operation on elements to the whole array. Just like in numpy
|
||||
* Element by element application of any operation on elements to the whole [NDElement]
|
||||
*/
|
||||
operator fun <T, F : Field<T>> Function1<T, T>.invoke(ndElement: NDElement<T, F>) =
|
||||
operator fun <T, C> Function1<T, T>.invoke(ndElement: NDElement<T, C, *>) =
|
||||
ndElement.map { value -> this@invoke(value) }
|
||||
|
||||
/* plus and minus */
|
||||
|
||||
/**
|
||||
* Summation operation for [NDElements] and single element
|
||||
* Summation operation for [NDElement] and single element
|
||||
*/
|
||||
operator fun <T, F : Field<T>> NDElement<T, F>.plus(arg: T): NDElement<T, F> =
|
||||
this.map { value -> elementField.run { arg + value } }
|
||||
operator fun <T, S : Space<T>> NDElement<T, S, *>.plus(arg: T) =
|
||||
map { value -> arg + value }
|
||||
|
||||
/**
|
||||
* Subtraction operation between [NDElements] and single element
|
||||
* Subtraction operation between [NDElement] and single element
|
||||
*/
|
||||
operator fun <T, F : Field<T>> NDElement<T, F>.minus(arg: T): NDElement<T, F> =
|
||||
this.map { value -> elementField.run { arg - value } }
|
||||
operator fun <T, S : Space<T>> NDElement<T, S, *>.minus(arg: T) =
|
||||
map { value -> arg - value }
|
||||
|
||||
/* prod and div */
|
||||
|
||||
/**
|
||||
* Product operation for [NDElements] and single element
|
||||
* Product operation for [NDElement] and single element
|
||||
*/
|
||||
operator fun <T, F : Field<T>> NDElement<T, F>.times(arg: T): NDElement<T, F> =
|
||||
this.map { value -> elementField.run { arg * value } }
|
||||
operator fun <T, R : Ring<T>> NDElement<T, R, *>.times(arg: T) =
|
||||
map { value -> arg * value }
|
||||
|
||||
/**
|
||||
* Division operation between [NDElements] and single element
|
||||
* Division operation between [NDElement] and single element
|
||||
*/
|
||||
operator fun <T, F : Field<T>> NDElement<T, F>.div(arg: T): NDElement<T, F> =
|
||||
this.map { value -> elementField.run { arg / value } }
|
||||
operator fun <T, F : Field<T>> NDElement<T, F, *>.div(arg: T) =
|
||||
map { value -> arg / value }
|
||||
|
||||
|
||||
// /**
|
||||
@ -117,24 +121,3 @@ operator fun <T, F : Field<T>> NDElement<T, F>.div(arg: T): NDElement<T, F> =
|
||||
// operator fun T.div(arg: NDStructure<T>): NDElement<T, F> = produce { index ->
|
||||
// field.run { this@div / arg[index] }
|
||||
// }
|
||||
|
||||
|
||||
/**
|
||||
* Read-only [NDStructure] coupled to the context.
|
||||
*/
|
||||
class GenericNDFieldElement<T, F : Field<T>>(
|
||||
override val context: NDField<T, F, NDStructure<T>>,
|
||||
private val structure: NDStructure<T>
|
||||
) :
|
||||
NDStructure<T> by structure,
|
||||
NDElement<T, F>,
|
||||
FieldElement<NDStructure<T>, GenericNDFieldElement<T, F>, NDField<T, F, NDStructure<T>>> {
|
||||
override val elementField: F get() = context.elementContext
|
||||
|
||||
override fun unwrap(): NDStructure<T> = structure
|
||||
|
||||
override fun NDStructure<T>.wrap() = GenericNDFieldElement(context, this)
|
||||
|
||||
override fun mapIndexed(transform: F.(index: IntArray, T) -> T) =
|
||||
ndStructure(context.shape) { index: IntArray -> context.elementContext.transform(index, get(index)) }.wrap()
|
||||
}
|
||||
|
@ -1,13 +1,16 @@
|
||||
package scientifik.kmath.structures
|
||||
|
||||
import scientifik.kmath.operations.FieldElement
|
||||
import scientifik.kmath.operations.RealField
|
||||
|
||||
typealias RealNDElement = StridedNDFieldElement<Double, RealField>
|
||||
typealias RealNDElement = BufferedNDFieldElement<Double, RealField>
|
||||
|
||||
class RealNDField(shape: IntArray) :
|
||||
StridedNDField<Double, RealField>(shape),
|
||||
class RealNDField(override val shape: IntArray) :
|
||||
BufferedNDField<Double, RealField>,
|
||||
ExtendedNDField<Double, RealField, NDBuffer<Double>> {
|
||||
|
||||
override val strides: Strides = DefaultStrides(shape)
|
||||
|
||||
override val elementContext: RealField get() = RealField
|
||||
override val zero by lazy { produce { zero } }
|
||||
override val one by lazy { produce { one } }
|
||||
@ -25,20 +28,20 @@ class RealNDField(shape: IntArray) :
|
||||
): RealNDElement {
|
||||
check(arg)
|
||||
val array = buildBuffer(arg.strides.linearSize) { offset -> RealField.transform(arg.buffer[offset]) }
|
||||
return StridedNDFieldElement(this, array)
|
||||
return BufferedNDFieldElement(this, array)
|
||||
}
|
||||
|
||||
override fun produce(initializer: RealField.(IntArray) -> Double): RealNDElement {
|
||||
val array = buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }
|
||||
return StridedNDFieldElement(this, array)
|
||||
return BufferedNDFieldElement(this, array)
|
||||
}
|
||||
|
||||
override fun mapIndexed(
|
||||
arg: NDBuffer<Double>,
|
||||
transform: RealField.(index: IntArray, Double) -> Double
|
||||
): StridedNDFieldElement<Double, RealField> {
|
||||
): RealNDElement {
|
||||
check(arg)
|
||||
return StridedNDFieldElement(
|
||||
return BufferedNDFieldElement(
|
||||
this,
|
||||
buildBuffer(arg.strides.linearSize) { offset ->
|
||||
elementContext.transform(
|
||||
@ -52,13 +55,16 @@ class RealNDField(shape: IntArray) :
|
||||
a: NDBuffer<Double>,
|
||||
b: NDBuffer<Double>,
|
||||
transform: RealField.(Double, Double) -> Double
|
||||
): StridedNDFieldElement<Double, RealField> {
|
||||
): RealNDElement {
|
||||
check(a, b)
|
||||
return StridedNDFieldElement(
|
||||
return BufferedNDFieldElement(
|
||||
this,
|
||||
buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) })
|
||||
}
|
||||
|
||||
override fun NDBuffer<Double>.toElement(): FieldElement<NDBuffer<Double>, *, out BufferedNDField<Double, RealField>> =
|
||||
BufferedNDFieldElement(this@RealNDField, buffer)
|
||||
|
||||
override fun power(arg: NDBuffer<Double>, pow: Double) = map(arg) { power(it, pow) }
|
||||
|
||||
override fun exp(arg: NDBuffer<Double>) = map(arg) { exp(it) }
|
||||
@ -75,9 +81,9 @@ class RealNDField(shape: IntArray) :
|
||||
/**
|
||||
* Fast element production using function inlining
|
||||
*/
|
||||
inline fun StridedNDField<Double, RealField>.produceInline(crossinline initializer: RealField.(Int) -> Double): RealNDElement {
|
||||
inline fun BufferedNDField<Double, RealField>.produceInline(crossinline initializer: RealField.(Int) -> Double): RealNDElement {
|
||||
val array = DoubleArray(strides.linearSize) { offset -> RealField.initializer(offset) }
|
||||
return StridedNDFieldElement(this, DoubleBuffer(array))
|
||||
return BufferedNDFieldElement(this, DoubleBuffer(array))
|
||||
}
|
||||
|
||||
/**
|
||||
@ -90,13 +96,13 @@ operator fun Function1<Double, Double>.invoke(ndElement: RealNDElement) =
|
||||
/* plus and minus */
|
||||
|
||||
/**
|
||||
* Summation operation for [StridedNDFieldElement] and single element
|
||||
* Summation operation for [BufferedNDElement] and single element
|
||||
*/
|
||||
operator fun RealNDElement.plus(arg: Double) =
|
||||
context.produceInline { i -> buffer[i] + arg }
|
||||
|
||||
/**
|
||||
* Subtraction operation between [StridedNDFieldElement] and single element
|
||||
* Subtraction operation between [BufferedNDElement] and single element
|
||||
*/
|
||||
operator fun RealNDElement.minus(arg: Double) =
|
||||
context.produceInline { i -> buffer[i] - arg }
|
||||
|
@ -1,86 +1,96 @@
|
||||
//package scientifik.kmath.structures
|
||||
//
|
||||
//import scientifik.kmath.operations.ShortRing
|
||||
//
|
||||
//
|
||||
////typealias ShortNDElement = StridedNDFieldElement<Short, ShortRing>
|
||||
//
|
||||
//class ShortNDRing(shape: IntArray) :
|
||||
// NDRing<Short, ShortRing, NDBuffer<Short>> {
|
||||
//
|
||||
// inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer<Short> =
|
||||
// ShortBuffer(ShortArray(size) { initializer(it) })
|
||||
//
|
||||
// /**
|
||||
// * Inline transform an NDStructure to
|
||||
// */
|
||||
// override fun map(
|
||||
// arg: NDBuffer<Short>,
|
||||
// transform: ShortRing.(Short) -> Short
|
||||
// ): ShortNDElement {
|
||||
// check(arg)
|
||||
// val array = buildBuffer(arg.strides.linearSize) { offset -> ShortRing.transform(arg.buffer[offset]) }
|
||||
// return StridedNDFieldElement(this, array)
|
||||
// }
|
||||
//
|
||||
// override fun produce(initializer: ShortRing.(IntArray) -> Short): ShortNDElement {
|
||||
// val array = buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }
|
||||
// return StridedNDFieldElement(this, array)
|
||||
// }
|
||||
//
|
||||
// override fun mapIndexed(
|
||||
// arg: NDBuffer<Short>,
|
||||
// transform: ShortRing.(index: IntArray, Short) -> Short
|
||||
// ): StridedNDFieldElement<Short, ShortRing> {
|
||||
// check(arg)
|
||||
// return StridedNDFieldElement(
|
||||
// this,
|
||||
// buildBuffer(arg.strides.linearSize) { offset ->
|
||||
// elementContext.transform(
|
||||
// arg.strides.index(offset),
|
||||
// arg.buffer[offset]
|
||||
// )
|
||||
// })
|
||||
// }
|
||||
//
|
||||
// override fun combine(
|
||||
// a: NDBuffer<Short>,
|
||||
// b: NDBuffer<Short>,
|
||||
// transform: ShortRing.(Short, Short) -> Short
|
||||
// ): StridedNDFieldElement<Short, ShortRing> {
|
||||
// check(a, b)
|
||||
// return StridedNDFieldElement(
|
||||
// this,
|
||||
// buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) })
|
||||
// }
|
||||
//}
|
||||
//
|
||||
//
|
||||
///**
|
||||
// * Fast element production using function inlining
|
||||
// */
|
||||
//inline fun StridedNDField<Short, ShortRing>.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement {
|
||||
// val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) }
|
||||
// return StridedNDFieldElement(this, ShortBuffer(array))
|
||||
//}
|
||||
//
|
||||
///**
|
||||
// * Element by element application of any operation on elements to the whole array. Just like in numpy
|
||||
// */
|
||||
//operator fun Function1<Short, Short>.invoke(ndElement: ShortNDElement) =
|
||||
// ndElement.context.produceInline { i -> invoke(ndElement.buffer[i]) }
|
||||
//
|
||||
//
|
||||
///* plus and minus */
|
||||
//
|
||||
///**
|
||||
// * Summation operation for [StridedNDFieldElement] and single element
|
||||
// */
|
||||
//operator fun ShortNDElement.plus(arg: Short) =
|
||||
// context.produceInline { i -> buffer[i] + arg }
|
||||
//
|
||||
///**
|
||||
// * Subtraction operation between [StridedNDFieldElement] and single element
|
||||
// */
|
||||
//operator fun ShortNDElement.minus(arg: Short) =
|
||||
// context.produceInline { i -> buffer[i] - arg }
|
||||
package scientifik.kmath.structures
|
||||
|
||||
import scientifik.kmath.operations.RingElement
|
||||
import scientifik.kmath.operations.ShortRing
|
||||
|
||||
|
||||
typealias ShortNDElement = BufferedNDRingElement<Short, ShortRing>
|
||||
|
||||
class ShortNDRing(override val shape: IntArray) :
|
||||
BufferedNDRing<Short, ShortRing> {
|
||||
|
||||
override val strides: Strides = DefaultStrides(shape)
|
||||
|
||||
override val elementContext: ShortRing get() = ShortRing
|
||||
override val zero by lazy { produce { ShortRing.zero } }
|
||||
override val one by lazy { produce { ShortRing.one } }
|
||||
|
||||
override inline fun buildBuffer(size: Int, crossinline initializer: (Int) -> Short): Buffer<Short> =
|
||||
ShortBuffer(ShortArray(size) { initializer(it) })
|
||||
|
||||
/**
|
||||
* Inline transform an NDStructure to
|
||||
*/
|
||||
override fun map(
|
||||
arg: NDBuffer<Short>,
|
||||
transform: ShortRing.(Short) -> Short
|
||||
): ShortNDElement {
|
||||
check(arg)
|
||||
val array = buildBuffer(arg.strides.linearSize) { offset -> ShortRing.transform(arg.buffer[offset]) }
|
||||
return BufferedNDRingElement(this, array)
|
||||
}
|
||||
|
||||
override fun produce(initializer: ShortRing.(IntArray) -> Short): ShortNDElement {
|
||||
val array = buildBuffer(strides.linearSize) { offset -> elementContext.initializer(strides.index(offset)) }
|
||||
return BufferedNDRingElement(this, array)
|
||||
}
|
||||
|
||||
override fun mapIndexed(
|
||||
arg: NDBuffer<Short>,
|
||||
transform: ShortRing.(index: IntArray, Short) -> Short
|
||||
): ShortNDElement {
|
||||
check(arg)
|
||||
return BufferedNDRingElement(
|
||||
this,
|
||||
buildBuffer(arg.strides.linearSize) { offset ->
|
||||
elementContext.transform(
|
||||
arg.strides.index(offset),
|
||||
arg.buffer[offset]
|
||||
)
|
||||
})
|
||||
}
|
||||
|
||||
override fun combine(
|
||||
a: NDBuffer<Short>,
|
||||
b: NDBuffer<Short>,
|
||||
transform: ShortRing.(Short, Short) -> Short
|
||||
): ShortNDElement {
|
||||
check(a, b)
|
||||
return BufferedNDRingElement(
|
||||
this,
|
||||
buildBuffer(strides.linearSize) { offset -> elementContext.transform(a.buffer[offset], b.buffer[offset]) })
|
||||
}
|
||||
|
||||
override fun NDBuffer<Short>.toElement(): RingElement<NDBuffer<Short>, *, out BufferedNDRing<Short, ShortRing>> =
|
||||
BufferedNDRingElement(this@ShortNDRing, buffer)
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Fast element production using function inlining
|
||||
*/
|
||||
inline fun BufferedNDRing<Short, ShortRing>.produceInline(crossinline initializer: ShortRing.(Int) -> Short): ShortNDElement {
|
||||
val array = ShortArray(strides.linearSize) { offset -> ShortRing.initializer(offset) }
|
||||
return BufferedNDRingElement(this, ShortBuffer(array))
|
||||
}
|
||||
|
||||
/**
|
||||
* Element by element application of any operation on elements to the whole array. Just like in numpy
|
||||
*/
|
||||
operator fun Function1<Short, Short>.invoke(ndElement: ShortNDElement) =
|
||||
ndElement.context.produceInline { i -> invoke(ndElement.buffer[i]) }
|
||||
|
||||
|
||||
/* plus and minus */
|
||||
|
||||
/**
|
||||
* Summation operation for [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun ShortNDElement.plus(arg: Short) =
|
||||
context.produceInline { i -> (buffer[i] + arg).toShort() }
|
||||
|
||||
/**
|
||||
* Subtraction operation between [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun ShortNDElement.minus(arg: Short) =
|
||||
context.produceInline { i -> (buffer[i] - arg).toShort() }
|
@ -1,97 +0,0 @@
|
||||
package scientifik.kmath.structures
|
||||
|
||||
import scientifik.kmath.operations.Field
|
||||
import scientifik.kmath.operations.FieldElement
|
||||
|
||||
abstract class StridedNDField<T, F : Field<T>>(final override val shape: IntArray) : NDField<T, F, NDBuffer<T>> {
|
||||
val strides = DefaultStrides(shape)
|
||||
|
||||
abstract fun buildBuffer(size: Int, initializer: (Int) -> T): Buffer<T>
|
||||
|
||||
/**
|
||||
* Convert any [NDStructure] to buffered structure using strides from this context.
|
||||
* If the structure is already [NDBuffer], conversion is free. If not, it could be expensive because iteration over indexes
|
||||
*
|
||||
* If the argument is [NDBuffer] with different strides structure, the new element will be produced.
|
||||
*/
|
||||
fun NDStructure<T>.toBuffer(): NDBuffer<T> {
|
||||
return if (this is NDBuffer<T> && this.strides == this@StridedNDField.strides) {
|
||||
this
|
||||
} else {
|
||||
produce { index -> get(index) }
|
||||
}
|
||||
}
|
||||
|
||||
fun NDBuffer<T>.toElement(): StridedNDFieldElement<T, F> =
|
||||
StridedNDFieldElement(this@StridedNDField, buffer)
|
||||
}
|
||||
|
||||
class StridedNDFieldElement<T, F : Field<T>>(
|
||||
override val context: StridedNDField<T, F>,
|
||||
override val buffer: Buffer<T>
|
||||
) :
|
||||
NDBuffer<T>,
|
||||
FieldElement<NDBuffer<T>, StridedNDFieldElement<T, F>, StridedNDField<T, F>>,
|
||||
NDElement<T, F> {
|
||||
|
||||
override val elementField: F
|
||||
get() = context.elementContext
|
||||
|
||||
override fun unwrap(): NDBuffer<T> =
|
||||
this
|
||||
|
||||
override fun NDBuffer<T>.wrap(): StridedNDFieldElement<T, F> =
|
||||
StridedNDFieldElement(context, this.buffer)
|
||||
|
||||
override val strides
|
||||
get() = context.strides
|
||||
|
||||
override val shape: IntArray
|
||||
get() = context.shape
|
||||
|
||||
override fun get(index: IntArray): T =
|
||||
buffer[strides.offset(index)]
|
||||
|
||||
override fun elements(): Sequence<Pair<IntArray, T>> =
|
||||
strides.indices().map { it to get(it) }
|
||||
|
||||
override fun map(action: F.(T) -> T) =
|
||||
context.run { map(this@StridedNDFieldElement, action) }.wrap()
|
||||
|
||||
override fun mapIndexed(transform: F.(index: IntArray, T) -> T) =
|
||||
context.run { mapIndexed(this@StridedNDFieldElement, transform) }.wrap()
|
||||
}
|
||||
|
||||
/**
|
||||
* Element by element application of any operation on elements to the whole array. Just like in numpy
|
||||
*/
|
||||
operator fun <T : Any, F : Field<T>> Function1<T, T>.invoke(ndElement: StridedNDFieldElement<T, F>) =
|
||||
ndElement.context.run { ndElement.map { invoke(it) } }
|
||||
|
||||
/* plus and minus */
|
||||
|
||||
/**
|
||||
* Summation operation for [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun <T : Any, F : Field<T>> StridedNDFieldElement<T, F>.plus(arg: T) =
|
||||
context.run { map { it + arg } }
|
||||
|
||||
/**
|
||||
* Subtraction operation between [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun <T : Any, F : Field<T>> StridedNDFieldElement<T, F>.minus(arg: T) =
|
||||
context.run { map { it - arg } }
|
||||
|
||||
/* prod and div */
|
||||
|
||||
/**
|
||||
* Product operation for [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun <T : Any, F : Field<T>> StridedNDFieldElement<T, F>.times(arg: T) =
|
||||
context.run { map { it * arg } }
|
||||
|
||||
/**
|
||||
* Division operation between [StridedNDFieldElement] and single element
|
||||
*/
|
||||
operator fun <T : Any, F : Field<T>> StridedNDFieldElement<T, F>.div(arg: T) =
|
||||
context.run { map { it / arg } }
|
@ -29,7 +29,7 @@ fun MutableBuffer.Companion.complex(size: Int) =
|
||||
ObjectBuffer.create(ComplexBufferSpec, size)
|
||||
|
||||
fun NDField.Companion.complex(shape: IntArray) =
|
||||
BufferNDField(shape, ComplexField) { size, init -> ObjectBuffer.create(ComplexBufferSpec, size, init) }
|
||||
BoxingNDField(shape, ComplexField) { size, init -> ObjectBuffer.create(ComplexBufferSpec, size, init) }
|
||||
|
||||
fun NDElement.Companion.complex(shape: IntArray, initializer: ComplexField.(IntArray) -> Complex) =
|
||||
NDField.complex(shape).produce(initializer)
|
||||
|
@ -8,8 +8,7 @@ class LazyNDField<T, F : Field<T>>(
|
||||
override val shape: IntArray,
|
||||
override val elementContext: F,
|
||||
val scope: CoroutineScope = GlobalScope
|
||||
) :
|
||||
NDField<T, F, NDStructure<T>> {
|
||||
) : NDField<T, F, NDStructure<T>> {
|
||||
|
||||
override val zero by lazy { produce { zero } }
|
||||
|
||||
@ -65,7 +64,8 @@ class LazyNDField<T, F : Field<T>>(
|
||||
class LazyNDStructure<T, F : Field<T>>(
|
||||
override val context: LazyNDField<T, F>,
|
||||
val function: suspend (IntArray) -> T
|
||||
) : FieldElement<NDStructure<T>, LazyNDStructure<T, F>, LazyNDField<T, F>>, NDElement<T, F> {
|
||||
) : FieldElement<NDStructure<T>, LazyNDStructure<T, F>, LazyNDField<T, F>>,
|
||||
NDElement<T, F, NDStructure<T>> {
|
||||
|
||||
|
||||
override fun unwrap(): NDStructure<T> = this
|
||||
@ -73,10 +73,6 @@ class LazyNDStructure<T, F : Field<T>>(
|
||||
override fun NDStructure<T>.wrap(): LazyNDStructure<T, F> = LazyNDStructure(context) { await(it) }
|
||||
|
||||
override val shape: IntArray get() = context.shape
|
||||
override val elementField: F get() = context.elementContext
|
||||
|
||||
override fun mapIndexed(transform: F.(index: IntArray, T) -> T): NDElement<T, F> =
|
||||
context.run { mapIndexed(this@LazyNDStructure, transform) }
|
||||
|
||||
private val cache = HashMap<IntArray, Deferred<T>>()
|
||||
|
||||
|
Loading…
Reference in New Issue
Block a user