diff --git a/src/main/kotlin/space/kscience/gradle/KScienceNativePlugin.kt b/src/main/kotlin/space/kscience/gradle/KScienceNativePlugin.kt
index a41fbf6..5b86fea 100644
--- a/src/main/kotlin/space/kscience/gradle/KScienceNativePlugin.kt
+++ b/src/main/kotlin/space/kscience/gradle/KScienceNativePlugin.kt
@@ -2,24 +2,61 @@ package space.kscience.gradle
 
 import org.gradle.api.Plugin
 import org.gradle.api.Project
-import org.gradle.kotlin.dsl.hasPlugin
+import org.gradle.kotlin.dsl.*
+import org.jetbrains.kotlin.gradle.dsl.KotlinMultiplatformExtension
 
+@Deprecated("Use common configuration block")
 public class KScienceNativePlugin : Plugin<Project> {
     override fun apply(project: Project): Unit = project.run {
+        logger.warn("Native plugin is deprecated. Use `ksceince.native()`")
+
         //Apply multiplatform plugin is not applied, apply it
         if (!plugins.hasPlugin("org.jetbrains.kotlin.multiplatform")) {
             logger.info("Kotlin multiplatform plugin is not resolved. Adding it automatically")
             plugins.apply("org.jetbrains.kotlin.multiplatform")
         }
 
-        registerKScienceExtension(::KScienceMppExtension).apply {
-            native()
+        if (!plugins.hasPlugin(KScienceCommonPlugin::class)) {
+            logger.info("KScience plugin is not resolved. Adding it automatically")
+            apply<KScienceCommonPlugin>()
         }
 
-        if (!plugins.hasPlugin(KScienceCommonPlugin::class)) {
-            configureKScience()
-        } else {
-            project.logger.warn("Use `kscience.native()` configuration block")
+        configure<KotlinMultiplatformExtension> {
+            val nativeTargets = setOf(
+                linuxX64(),
+                mingwX64(),
+                macosX64(),
+                iosX64(),
+                iosArm64()
+            )
+
+            sourceSets {
+                val commonMain = findByName("commonMain")!!
+                val commonTest = findByName("commonTest")!!
+
+                val nativeMain by creating {
+                    dependsOn(commonMain)
+                }
+
+                val nativeTest by creating {
+                    //should NOT depend on nativeMain because automatic dependency by plugin
+                    dependsOn(commonTest)
+                }
+
+                configure(nativeTargets) {
+                    compilations["main"]?.apply {
+                        configure(kotlinSourceSets) {
+                            dependsOn(nativeMain)
+                        }
+                    }
+
+                    compilations["test"]?.apply {
+                        configure(kotlinSourceSets) {
+                            dependsOn(nativeTest)
+                        }
+                    }
+                }
+            }
         }
     }
 }