kscience/dataforge-core
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Merge pull request '0.7.0' (!79) from dev into master

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Reviewed-on: #79
This commit is contained in:
Alexander Nozik 2023-11-26 10:08:10 +03:00
commit c754dc3471
73 changed files with 977 additions and 765 deletions
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4
.space.kts
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@ -1,4 +0,0 @@
job("Build") {
gradlew("openjdk:11", "build")
}

46
CHANGELOG.md
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@ -14,15 +14,41 @@
### Security
## 0.7.0 - 2023-11-26
### Added
- Obligatory `type: KType` and `descriptor` property for `MetaConverters`
- Added separate `Meta`, `SealedMeta` and `ObservableMutableMeta` builders.
### Changed
- Meta converter `metaToObject` returns a non-nullable type. Additional method `metaToObjectOrNull` for nullable return.
- Kotlin 1.9.20.
- Migrated from ktor-io to kotlinx-io.
- `MutableMeta` builder now returns a simplified version of meta that does not hold listeners.
- More concise names for read/write methods in IO.
- Remove unnecessary confusion with `get`/`getMeta` by removing `getMeta` from the interface.
### Deprecated
- `String.parseValue` is replaced with `Value.parse`
### Fixed
- Memory leak in SealedMeta builder
## 0.6.2 - 2023-07-29
### Changed
- Meta to Json serializer now serializes a single item with index as an array. It is important for plotly integration.
- Meta to Json serializes Meta without children a value as literal or array instead of an object with `@value` field.
## 0.6.1 - 2023-03-31
### Added
- File cache for workspace
- Smart task metadata transformation for workspace
- Add `readOnly` property to descriptors
@ -32,6 +58,7 @@
- More fine-grained types in Action builders.
### Changed
- `Name::replaceLast` API
- `PluginFactory` no longer requires plugin class
- Collection<Named> toMap -> associateByName
@ -53,9 +80,11 @@
- Separate interfaces for `IOReader` and `IOWriter`
### Deprecated
- Context.fetch -> Context.request
### Fixed
- `readDataDirectory` does not split names with dots
- Front matter reader does not crash on non-UTF files
- Meta file name in readMeta from directory
@ -64,10 +93,12 @@
## 0.5.2
### Added
- Yaml plugin
- Partial fix to #53
### Fixed
- MutableMetaImpl attachment and checks
- Listeners in observable meta are replaced by lists
- JS number comparison bug.
@ -75,9 +106,11 @@
## 0.5.0
### Added
- Experimental `listOfSpec` delegate.
### Changed
- **API breaking** Config is deprecated, use `ObservableMeta` instead.
- **API breaking** Descriptor no has a member property `defaultValue` instead of `defaultItem()` extension. It caches default value state on the first call. It is done because computing default on each call is too expensive.
- Kotlin 1.5.10
@ -88,24 +121,28 @@
- **API breaking** Configurable`config` changed to `meta`
### Removed
- `Config`
- Public PluginManager mutability
- Tables and tables-exposed moved to the separate project `tables.kt`
- BinaryMetaFormat. Use CBOR encoding instead
### Fixed
- Proper json array index treatment.
- Proper json index for single-value array.
## 0.4.0
### Added
- LogManager plugin
- dataforge-context API dependency on SLF4j
- Context `withEnv` and `fetch` methods to manipulate plugins without changing plugins after creation.
- Split `ItemDescriptor` into builder and read-only part
### Changed
- Kotlin-logging moved from common to JVM and JS. Replaced by console for native.
- Package changed to `space.kscience`
- Scheme made observable
@ -115,18 +152,22 @@
- Refactor loggers
### Deprecated
- Direct use of PluginManager
### Removed
- Common dependency on Kotlin-logging
- Kotlinx-io fork dependency. Replaced by Ktor-io.
### Fixed
- Scheme properties properly handle children property change.
## 0.3.0
### Added
- Yaml meta format based on yaml.kt
- `Path` builders
- Special ValueType for lists
@ -134,6 +175,7 @@
- Multiplatform yaml meta
### Changed
- `ListValue` and `DoubleArrayValue` implement `Iterable`.
- Changed the logic of `Value::isList` to check for type instead of size
- `Meta{}` builder made inline
@ -150,6 +192,7 @@
## 0.2.0
### Changed
- Context content resolution refactor
- Kotlin 1.4.10 (build tools 0.6.0)
- Empty query in Name is null instead of ""
@ -159,13 +202,16 @@
- Configurable is no longer MutableItemProvider. All functionality moved to Scheme.
### Deprecated
- Context activation API
- TextRenderer
### Removed
- Functional server prototype
- `dataforge-output` module
### Fixed
- Global context CoroutineScope resolution
- Library mode compliance

11
README.md
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@ -5,33 +5,30 @@
### [dataforge-context](dataforge-context)
>
> Context and provider definitions
>
> **Maturity**: DEVELOPMENT
### [dataforge-data](dataforge-data)
>
>
> **Maturity**: EXPERIMENTAL
### [dataforge-io](dataforge-io)
> IO module
>
>
> **Maturity**: PROTOTYPE
> **Maturity**: EXPERIMENTAL
### [dataforge-meta](dataforge-meta)
>
> Meta definition and basic operations on meta
>
> **Maturity**: DEVELOPMENT
### [dataforge-scripting](dataforge-scripting)
>
>
> **Maturity**: PROTOTYPE
### [dataforge-workspace](dataforge-workspace)
>
>
> **Maturity**: EXPERIMENTAL
### [dataforge-io/dataforge-io-yaml](dataforge-io/dataforge-io-yaml)

12
build.gradle.kts
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@ -1,5 +1,4 @@
import org.jetbrains.kotlin.gradle.tasks.KotlinCompile
import space.kscience.gradle.isInDevelopment
import space.kscience.gradle.useApache2Licence
import space.kscience.gradle.useSPCTeam
@ -9,7 +8,7 @@ plugins {
allprojects {
group = "space.kscience"
version = "0.6.2"
version = "0.7.0"
}
subprojects {
@ -31,14 +30,7 @@ ksciencePublish {
useApache2Licence()
useSPCTeam()
}
github("dataforge-core", "SciProgCentre")
space(
if (isInDevelopment) {
"https://maven.pkg.jetbrains.space/spc/p/sci/dev"
} else {
"https://maven.pkg.jetbrains.space/spc/p/sci/maven"
}
)
repository("spc","https://maven.sciprog.center/kscience")
sonatype()
}

17
dataforge-context/README.md
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@ -6,27 +6,18 @@ Context and provider definitions
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-context:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-context:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-context:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-context:0.6.2-dev-2")
implementation("space.kscience:dataforge-context:0.7.0")
}
```

2
dataforge-context/api/dataforge-context.api
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@ -195,7 +195,6 @@ public final class space/kscience/dataforge/context/PluginManager : java/lang/It
public final class space/kscience/dataforge/context/PluginTag : space/kscience/dataforge/meta/MetaRepr {
public static final field Companion Lspace/kscience/dataforge/context/PluginTag$Companion;
public static final field DATAFORGE_GROUP Ljava/lang/String;
public synthetic fun <init> (ILjava/lang/String;Ljava/lang/String;Ljava/lang/String;Lkotlinx/serialization/internal/SerializationConstructorMarker;)V
public fun <init> (Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;)V
public synthetic fun <init> (Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;ILkotlin/jvm/internal/DefaultConstructorMarker;)V
public final fun component1 ()Ljava/lang/String;
@ -211,7 +210,6 @@ public final class space/kscience/dataforge/context/PluginTag : space/kscience/d
public final fun matches (Lspace/kscience/dataforge/context/PluginTag;)Z
public fun toMeta ()Lspace/kscience/dataforge/meta/Meta;
public fun toString ()Ljava/lang/String;
public static final synthetic fun write$Self (Lspace/kscience/dataforge/context/PluginTag;Lkotlinx/serialization/encoding/CompositeEncoder;Lkotlinx/serialization/descriptors/SerialDescriptor;)V
}
public final class space/kscience/dataforge/context/PluginTag$$serializer : kotlinx/serialization/internal/GeneratedSerializer {

4
dataforge-context/src/commonMain/kotlin/space/kscience/dataforge/context/Plugin.kt
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@ -3,8 +3,8 @@ package space.kscience.dataforge.context
import space.kscience.dataforge.context.Plugin.Companion.TARGET
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.MetaRepr
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.misc.Named
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.names.parseAsName
import space.kscience.dataforge.provider.Provider
@ -18,7 +18,7 @@ import space.kscience.dataforge.provider.Provider
*
* create - configure - attach - detach - destroy
*/
@Type(TARGET)
@DfId(TARGET)
public interface Plugin : Named, ContextAware, Provider, MetaRepr {
/**

4
dataforge-context/src/commonMain/kotlin/space/kscience/dataforge/context/PluginFactory.kt
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@ -1,9 +1,9 @@
package space.kscience.dataforge.context
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
@Type(PluginFactory.TYPE)
@DfId(PluginFactory.TYPE)
public interface PluginFactory<T : Plugin> : Factory<T> {
public val tag: PluginTag

5
dataforge-context/src/commonMain/kotlin/space/kscience/dataforge/properties/MetaProperty.kt
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@ -1,7 +1,8 @@
package space.kscience.dataforge.properties
import space.kscience.dataforge.meta.*
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.ObservableMutableMeta
import space.kscience.dataforge.meta.transformations.MetaConverter
import space.kscience.dataforge.meta.transformations.nullableMetaToObject
import space.kscience.dataforge.meta.transformations.nullableObjectToMeta
@ -24,7 +25,7 @@ public class MetaProperty<T : Any>(
override fun onChange(owner: Any?, callback: (T?) -> Unit) {
meta.onChange(owner) { name ->
if (name.startsWith(this@MetaProperty.name)) callback(converter.nullableMetaToObject(get(name)))
if (name.startsWith(this@MetaProperty.name)) callback(converter.nullableMetaToObject(this[name]))
}
}

18
dataforge-context/src/jvmMain/kotlin/space/kscience/dataforge/provider/dfType.kt
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@ -4,29 +4,29 @@ import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.PluginBuilder
import space.kscience.dataforge.context.gather
import space.kscience.dataforge.misc.DFExperimental
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.misc.Named
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.names.Name
import kotlin.reflect.KClass
import kotlin.reflect.full.findAnnotation
@DFExperimental
public val KClass<*>.dfType: String
get() = findAnnotation<Type>()?.id ?: simpleName ?: ""
public val KClass<*>.dfId: String
get() = findAnnotation<DfId>()?.id ?: simpleName ?: ""
/**
* Provide an object with given name inferring target from its type using [Type] annotation
* Provide an object with given name inferring target from its type using [DfId] annotation
*/
@DFExperimental
public inline fun <reified T : Any> Provider.provideByType(name: String): T? {
val target = T::class.dfType
val target = T::class.dfId
return provide(target, name)
}
@DFExperimental
public inline fun <reified T : Any> Provider.top(): Map<Name, T> {
val target = T::class.dfType
val target = T::class.dfId
return top(target)
}
@ -35,15 +35,15 @@ public inline fun <reified T : Any> Provider.top(): Map<Name, T> {
*/
@DFExperimental
public inline fun <reified T : Any> Context.gather(inherit: Boolean = true): Map<Name, T> =
gather<T>(T::class.dfType, inherit)
gather<T>(T::class.dfId, inherit)
@DFExperimental
public inline fun <reified T : Any> PluginBuilder.provides(items: Map<Name, T>) {
provides(T::class.dfType, items)
provides(T::class.dfId, items)
}
@DFExperimental
public inline fun <reified T : Any> PluginBuilder.provides(vararg items: Named) {
provides(T::class.dfType, *items)
provides(T::class.dfId, *items)
}

17
dataforge-data/README.md
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@ -6,27 +6,18 @@
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-data:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-data:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-data:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-data:0.6.2-dev-2")
implementation("space.kscience:dataforge-data:0.7.0")
}
```

4
dataforge-data/src/commonMain/kotlin/space/kscience/dataforge/data/Data.kt
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@ -5,7 +5,7 @@ import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.MetaRepr
import space.kscience.dataforge.meta.isEmpty
import space.kscience.dataforge.misc.DFInternal
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import kotlin.coroutines.CoroutineContext
import kotlin.coroutines.EmptyCoroutineContext
import kotlin.reflect.KType
@ -14,7 +14,7 @@ import kotlin.reflect.typeOf
/**
* A data element characterized by its meta
*/
@Type(Data.TYPE)
@DfId(Data.TYPE)
public interface Data<out T> : Goal<T>, MetaRepr {
/**
* Type marker for the data. The type is known before the calculation takes place so it could be checked.

1
dataforge-data/src/commonMain/kotlin/space/kscience/dataforge/data/DataSet.kt
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@ -6,7 +6,6 @@ import kotlinx.coroutines.flow.emptyFlow
import kotlinx.coroutines.flow.mapNotNull
import space.kscience.dataforge.data.Data.Companion.TYPE_OF_NOTHING
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.set
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.names.asName
import space.kscience.dataforge.names.endsWith

4
dataforge-data/src/commonMain/kotlin/space/kscience/dataforge/data/DataTree.kt
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@ -2,7 +2,7 @@ package space.kscience.dataforge.data
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.misc.DFInternal
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.names.*
import kotlin.collections.component1
import kotlin.collections.component2
@ -31,7 +31,7 @@ public val <T : Any> DataTreeItem<T>.type: KType
/**
* A tree-like [DataSet] grouped into the node. All data inside the node must inherit its type
*/
@Type(DataTree.TYPE)
@DfId(DataTree.TYPE)
public interface DataTree<out T : Any> : DataSet<T> {
/**

17
dataforge-io/README.md
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@ -6,27 +6,18 @@ IO module
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-io:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-io:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-io:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-io:0.6.2-dev-2")
implementation("space.kscience:dataforge-io:0.7.0")
}
```

13
dataforge-io/build.gradle.kts
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@ -1,11 +1,11 @@
import space.kscience.gradle.KScienceVersions
plugins {
id("space.kscience.gradle.mpp")
}
description = "IO module"
val ioVersion = "0.2.1"
kscience {
jvm()
js()
@ -15,11 +15,12 @@ kscience {
cbor()
}
dependencies {
api(project(":dataforge-context"))
api("io.ktor:ktor-io:${KScienceVersions.ktorVersion}")
api(projects.dataforgeContext)
api("org.jetbrains.kotlinx:kotlinx-io-core:$ioVersion")
api("org.jetbrains.kotlinx:kotlinx-io-bytestring:$ioVersion")
}
}
readme {
maturity = space.kscience.gradle.Maturity.PROTOTYPE
readme{
maturity = space.kscience.gradle.Maturity.EXPERIMENTAL
}

17
dataforge-io/dataforge-io-yaml/README.md
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@ -6,27 +6,18 @@ YAML meta IO
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-io-yaml:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-io-yaml:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-io-yaml:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-io-yaml:0.6.2-dev-2")
implementation("space.kscience:dataforge-io-yaml:0.7.0")
}
```

48
dataforge-io/dataforge-io-yaml/src/commonMain/kotlin/space/kscience/dataforge/io/yaml/FrontMatterEnvelopeFormat.kt
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@ -1,7 +1,11 @@
package space.kscience.dataforge.io.yaml
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.bytestring.ByteString
import kotlinx.io.bytestring.encodeToByteString
import kotlinx.io.readByteString
import kotlinx.io.writeString
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.io.*
@ -15,49 +19,49 @@ public class FrontMatterEnvelopeFormat(
private val metaFormatFactory: MetaFormatFactory = YamlMetaFormat,
) : EnvelopeFormat {
override fun readObject(binary: Binary): Envelope = binary.read {
override fun readFrom(binary: Binary): Envelope = binary.read {
var offset = 0
offset += discardWithSeparator(
SEPARATOR.encodeToByteArray(),
SEPARATOR,
atMost = 1024,
)
val line = ByteArray {
offset += readWithSeparatorTo(this, "\n".encodeToByteArray())
offset += readWithSeparatorTo(this, "\n".encodeToByteString())
}.decodeToString()
val readMetaFormat = line.trim().takeIf { it.isNotBlank() }?.let { io.resolveMetaFormat(it) } ?: YamlMetaFormat
val packet = ByteArray {
offset += readWithSeparatorTo(this, SEPARATOR.encodeToByteArray())
offset += readWithSeparatorTo(this, SEPARATOR)
}
offset += discardLine()
val meta = readMetaFormat.readObject(packet.asBinary())
val meta = readMetaFormat.readFrom(packet.asBinary())
Envelope(meta, binary.view(offset))
}
override fun readObject(input: Input): Envelope = readObject(input.readBinary())
override fun readFrom(source: Source): Envelope = readFrom(source.readBinary())
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
) {
val metaFormat = metaFormatFactory.build(io.context, meta)
val formatSuffix = if (metaFormat is YamlMetaFormat) "" else metaFormatFactory.shortName
output.writeRawString("$SEPARATOR${formatSuffix}\r\n")
metaFormat.run { metaFormat.writeObject(output, obj.meta) }
output.writeRawString("$SEPARATOR\r\n")
sink.writeString("$SEPARATOR${formatSuffix}\r\n")
metaFormat.run { metaFormat.writeTo(sink, obj.meta) }
sink.writeString("$SEPARATOR\r\n")
//Printing data
obj.data?.let { data ->
output.writeBinary(data)
sink.writeBinary(data)
}
}
public companion object : EnvelopeFormatFactory {
public const val SEPARATOR: String = "---"
public val SEPARATOR: ByteString = "---".encodeToByteString()
private val metaTypeRegex = "---(\\w*)\\s*".toRegex()
@ -69,8 +73,8 @@ public class FrontMatterEnvelopeFormat(
override fun peekFormat(io: IOPlugin, binary: Binary): EnvelopeFormat? = binary.read {
//read raw string to avoid UTF issues
val line = readRawString(3)
return@read if (line == "---") {
val line = readByteString(3)
return@read if (line == "---".encodeToByteString()) {
default
} else {
null
@ -79,15 +83,15 @@ public class FrontMatterEnvelopeFormat(
private val default by lazy { build(Global, Meta.EMPTY) }
override fun readObject(binary: Binary): Envelope = default.readObject(binary)
override fun readFrom(binary: Binary): Envelope = default.readFrom(binary)
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
): Unit = default.writeObject(output, obj)
): Unit = default.writeTo(sink, obj)
override fun readObject(input: Input): Envelope = default.readObject(input)
override fun readFrom(source: Source): Envelope = default.readFrom(source)
}
}

32
dataforge-io/dataforge-io-yaml/src/commonMain/kotlin/space/kscience/dataforge/io/yaml/YamlMetaFormat.kt
View File

@ -1,13 +1,13 @@
package space.kscience.dataforge.io.yaml
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.readString
import kotlinx.io.writeString
import net.mamoe.yamlkt.*
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.io.MetaFormat
import space.kscience.dataforge.io.MetaFormatFactory
import space.kscience.dataforge.io.readUtf8String
import space.kscience.dataforge.io.writeUtf8String
import space.kscience.dataforge.meta.*
import space.kscience.dataforge.meta.descriptors.MetaDescriptor
import space.kscience.dataforge.meta.descriptors.get
@ -32,7 +32,7 @@ public fun Meta.toYaml(): YamlMap {
private class YamlMeta(private val yamlMap: YamlMap, private val descriptor: MetaDescriptor? = null) : Meta {
override val value: Value?
get() = yamlMap.getStringOrNull(null)?.parseValue()
get() = yamlMap.getStringOrNull(null)?.let { Value.parse(it) }
private fun buildItems(): Map<NameToken, Meta> {
val map = LinkedHashMap<NameToken, Meta>()
@ -43,13 +43,13 @@ private class YamlMeta(private val yamlMap: YamlMap, private val descriptor: Met
val token = NameToken(stringKey)
when (value) {
YamlNull -> Meta(Null)
is YamlLiteral -> map[token] = Meta(value.content.parseValue())
is YamlLiteral -> map[token] = Meta(Value.parse(value.content))
is YamlMap -> map[token] = value.toMeta()
is YamlList -> if (value.all { it is YamlLiteral }) {
val listValue = ListValue(
value.map {
//We already checked that all values are primitives
(it as YamlLiteral).content.parseValue()
Value.parse((it as YamlLiteral).content)
}
)
map[token] = Meta(listValue)
@ -75,7 +75,7 @@ private class YamlMeta(private val yamlMap: YamlMap, private val descriptor: Met
public fun YamlElement.toMeta(descriptor: MetaDescriptor? = null): Meta = when (this) {
YamlNull -> Meta(Null)
is YamlLiteral -> Meta(content.parseValue())
is YamlLiteral -> Meta(Value.parse(content))
is YamlMap -> toMeta()
//We can't return multiple items therefore we create top level node
is YamlList -> YamlMap(mapOf("@yamlArray" to this)).toMeta(descriptor)
@ -89,14 +89,14 @@ public fun YamlMap.toMeta(): Meta = YamlMeta(this)
*/
public class YamlMetaFormat(private val meta: Meta) : MetaFormat {
override fun writeMeta(output: Output, meta: Meta, descriptor: MetaDescriptor?) {
override fun writeMeta(sink: Sink, meta: Meta, descriptor: MetaDescriptor?) {
val yaml: YamlMap = meta.toYaml()
val string = Yaml.encodeToString(YamlMap.serializer(), yaml)
output.writeUtf8String(string)
sink.writeString(string)
}
override fun readMeta(input: Input, descriptor: MetaDescriptor?): Meta {
val yaml = Yaml.decodeYamlMapFromString(input.readUtf8String())
override fun readMeta(source: Source, descriptor: MetaDescriptor?): Meta {
val yaml = Yaml.decodeYamlMapFromString(source.readString())
return yaml.toMeta()
}
@ -109,10 +109,10 @@ public class YamlMetaFormat(private val meta: Meta) : MetaFormat {
private val default = YamlMetaFormat(Meta.EMPTY)
override fun writeMeta(output: Output, meta: Meta, descriptor: MetaDescriptor?): Unit =
default.writeMeta(output, meta, descriptor)
override fun writeMeta(sink: Sink, meta: Meta, descriptor: MetaDescriptor?): Unit =
default.writeMeta(sink, meta, descriptor)
override fun readMeta(input: Input, descriptor: MetaDescriptor?): Meta =
default.readMeta(input, descriptor)
override fun readMeta(source: Source, descriptor: MetaDescriptor?): Meta =
default.readMeta(source, descriptor)
}
}

39
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/Binary.kt
View File

@ -1,6 +1,9 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.*
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.buffered
import kotlinx.io.readByteArray
import kotlin.math.min
/**
@ -17,13 +20,13 @@ public interface Binary {
* Read maximum of [atMost] bytes as input from the binary, starting at [offset]. The generated input is always closed
* when leaving scope, so it could not be leaked outside of scope of [block].
*/
public fun <R> read(offset: Int = 0, atMost: Int = size - offset, block: Input.() -> R): R
public fun <R> read(offset: Int = 0, atMost: Int = size - offset, block: Source.() -> R): R
public suspend fun <R> readSuspend(offset: Int = 0, atMost: Int = size - offset, block: suspend Input.() -> R): R
public suspend fun <R> readSuspend(offset: Int = 0, atMost: Int = size - offset, block: suspend Source.() -> R): R
/**
* Read a binary with given [offset] relative to this binary and given [binarySize].
* In general, resulting binary is of the same type as this one, but it is not guaranteed.
* In general, the resulting binary is of the same type as this one, but it is not guaranteed.
*/
public fun view(offset: Int, binarySize: Int = size - offset): Binary
@ -38,25 +41,27 @@ internal class ByteArrayBinary(
override val size: Int = array.size - start,
) : Binary {
override fun <R> read(offset: Int, atMost: Int, block: Input.() -> R): R {
override fun <R> read(offset: Int, atMost: Int, block: Source.() -> R): R {
require(offset >= 0) { "Offset must be positive" }
require(offset < array.size) { "Offset $offset is larger than array size" }
val input = ByteReadPacket(
return ByteArraySource(
array,
offset + start,
min(atMost, size - offset)
)
return input.use(block)
).buffered().use(block)
}
override suspend fun <R> readSuspend(offset: Int, atMost: Int, block: suspend Input.() -> R): R {
override suspend fun <R> readSuspend(offset: Int, atMost: Int, block: suspend Source.() -> R): R {
require(offset >= 0) { "Offset must be positive" }
require(offset < array.size) { "Offset $offset is larger than array size" }
val input = ByteReadPacket(
val input = ByteArraySource(
array,
offset + start,
min(atMost, size - offset)
)
).buffered()
return try {
block(input)
} finally {
@ -77,26 +82,26 @@ public fun Binary.toByteArray(): ByteArray = if (this is ByteArrayBinary) {
array.copyOfRange(start, start + size) // TODO do we need to ensure data safety here?
} else {
read {
readBytes()
readByteArray()
}
}
//TODO optimize for file-based Inputs
public fun Input.readBinary(size: Int? = null): Binary {
val array = if (size == null) readBytes() else readBytes(size)
public fun Source.readBinary(size: Int? = null): Binary {
val array = if (size == null) readByteArray() else readByteArray(size)
return ByteArrayBinary(array)
}
/**
* Direct write of binary to the output. Returns the number of bytes written
*/
public fun Output.writeBinary(binary: Binary): Int {
public fun Sink.writeBinary(binary: Binary): Int {
return if (binary is ByteArrayBinary) {
writeFully(binary.array, binary.start, binary.start + binary.size)
write(binary.array, binary.start, binary.start + binary.size)
binary.size
} else {
binary.read {
copyTo(this@writeBinary).toInt()
transferTo(this@writeBinary).toInt()
}
}
}

4
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/EnvelopeBuilder.kt
View File

@ -1,6 +1,6 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.Output
import kotlinx.io.Sink
import space.kscience.dataforge.meta.*
public class EnvelopeBuilder : Envelope {
@ -33,7 +33,7 @@ public class EnvelopeBuilder : Envelope {
/**
* Construct a data binary from given builder
*/
public inline fun data(block: Output.() -> Unit) {
public inline fun data(block: Sink.() -> Unit) {
data = ByteArray { block() }.asBinary()
}

8
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/EnvelopeFormat.kt
View File

@ -1,10 +1,10 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.Input
import kotlinx.io.Source
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.io.EnvelopeFormatFactory.Companion.ENVELOPE_FORMAT_TYPE
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.names.asName
import kotlin.reflect.KType
@ -15,9 +15,9 @@ public interface EnvelopeFormat : IOFormat<Envelope> {
override val type: KType get() = typeOf<Envelope>()
}
public fun EnvelopeFormat.read(input: Input): Envelope = readObject(input)
public fun EnvelopeFormat.read(input: Source): Envelope = readFrom(input)
@Type(ENVELOPE_FORMAT_TYPE)
@DfId(ENVELOPE_FORMAT_TYPE)
public interface EnvelopeFormatFactory : IOFormatFactory<Envelope>, EnvelopeFormat {
override val type: KType get() = typeOf<Envelope>()

15
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/EnvelopeParts.kt
View File

@ -1,5 +1,8 @@
package space.kscience.dataforge.io
import kotlinx.io.bytestring.ByteString
import kotlinx.io.bytestring.decodeToString
import kotlinx.io.write
import space.kscience.dataforge.io.Envelope.Companion.ENVELOPE_NODE_KEY
import space.kscience.dataforge.io.PartDescriptor.Companion.DEFAULT_MULTIPART_DATA_SEPARATOR
import space.kscience.dataforge.io.PartDescriptor.Companion.MULTIPART_DATA_TYPE
@ -20,7 +23,7 @@ private class PartDescriptor : Scheme() {
val PARTS_KEY = MULTIPART_KEY + "parts"
val SEPARATOR_KEY = MULTIPART_KEY + "separator"
const val DEFAULT_MULTIPART_DATA_SEPARATOR = "\r\n#~PART~#\r\n"
val DEFAULT_MULTIPART_DATA_SEPARATOR = "\r\n#~PART~#\r\n".toAsciiByteString()
const val MULTIPART_DATA_TYPE = "envelope.multipart"
}
@ -32,12 +35,12 @@ public typealias EnvelopeParts = List<EnvelopePart>
public fun EnvelopeBuilder.multipart(
parts: EnvelopeParts,
separator: String = DEFAULT_MULTIPART_DATA_SEPARATOR,
separator: ByteString = DEFAULT_MULTIPART_DATA_SEPARATOR,
) {
dataType = MULTIPART_DATA_TYPE
var offsetCounter = 0
val separatorSize = separator.length
val separatorSize = separator.size
val partDescriptors = parts.map { (binary, description) ->
offsetCounter += separatorSize
PartDescriptor {
@ -51,14 +54,14 @@ public fun EnvelopeBuilder.multipart(
meta {
if (separator != DEFAULT_MULTIPART_DATA_SEPARATOR) {
SEPARATOR_KEY put separator
SEPARATOR_KEY put separator.decodeToString()
}
setIndexed(PARTS_KEY, partDescriptors.map { it.toMeta() })
}
data {
parts.forEach {
writeRawString(separator)
write(separator)
writeBinary(it.binary)
}
}
@ -69,7 +72,7 @@ public fun EnvelopeBuilder.multipart(
*/
public fun EnvelopeBuilder.envelopes(
envelopes: List<Envelope>,
separator: String = DEFAULT_MULTIPART_DATA_SEPARATOR,
separator: ByteString = DEFAULT_MULTIPART_DATA_SEPARATOR,
) {
val parts = envelopes.map {
val binary = Binary(it, TaggedEnvelopeFormat)

66
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/IOFormat.kt
View File

@ -1,12 +1,14 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.*
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.readByteArray
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Factory
import space.kscience.dataforge.io.IOFormatFactory.Companion.IO_FORMAT_TYPE
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.misc.Named
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.names.asName
import kotlin.reflect.KType
@ -21,9 +23,9 @@ public interface IOReader<out T> {
*/
public val type: KType
public fun readObject(input: Input): T
public fun readFrom(source: Source): T
public fun readObject(binary: Binary): T = binary.read { readObject(this) }
public fun readFrom(binary: Binary): T = binary.read { readFrom(this) }
public companion object {
/**
@ -32,21 +34,21 @@ public interface IOReader<out T> {
public val binary: IOReader<Binary> = object : IOReader<Binary> {
override val type: KType = typeOf<Binary>()
override fun readObject(input: Input): Binary = input.readBytes().asBinary()
override fun readFrom(source: Source): Binary = source.readByteArray().asBinary()
override fun readObject(binary: Binary): Binary = binary
override fun readFrom(binary: Binary): Binary = binary
}
}
}
public inline fun <reified T> IOReader(crossinline read: Input.() -> T): IOReader<T> = object : IOReader<T> {
public inline fun <reified T> IOReader(crossinline read: Source.() -> T): IOReader<T> = object : IOReader<T> {
override val type: KType = typeOf<T>()
override fun readObject(input: Input): T = input.read()
override fun readFrom(source: Source): T = source.read()
}
public fun interface IOWriter<in T> {
public fun writeObject(output: Output, obj: T)
public fun writeTo(sink: Sink, obj: T)
}
/**
@ -54,24 +56,23 @@ public fun interface IOWriter<in T> {
*/
public interface IOFormat<T> : IOReader<T>, IOWriter<T>
public fun <T : Any> Input.readObject(format: IOReader<T>): T = format.readObject(this@readObject)
public fun <T : Any> Source.readWith(format: IOReader<T>): T = format.readFrom(this)
public fun <T : Any> IOFormat<T>.readObjectFrom(binary: Binary): T = binary.read {
readObject(this)
/**
* Read given binary as an object using given format
*/
public fun <T : Any> Binary.readWith(format: IOReader<T>): T = read {
readWith(format)
}
/**
* Read given binary as object using given format
* Write an object to the [Sink] with given [format]
*/
public fun <T : Any> Binary.readWith(format: IOReader<T>): T = read {
readObject(format)
}
public fun <T : Any> Output.writeObject(format: IOWriter<T>, obj: T): Unit =
format.writeObject(this@writeObject, obj)
public fun <T : Any> Sink.writeWith(format: IOWriter<T>, obj: T): Unit =
format.writeTo(this, obj)
@Type(IO_FORMAT_TYPE)
@DfId(IO_FORMAT_TYPE)
public interface IOFormatFactory<T : Any> : Factory<IOFormat<T>>, Named {
/**
* Explicit type for dynamic type checks
@ -85,18 +86,33 @@ public interface IOFormatFactory<T : Any> : Factory<IOFormat<T>>, Named {
}
}
public fun <T : Any> Binary(obj: T, format: IOWriter<T>): Binary = Binary { format.writeObject(this, obj) }
public fun <T : Any> Binary(obj: T, format: IOWriter<T>): Binary = Binary { format.writeTo(this, obj) }
public object FloatIOFormat : IOFormat<Float>, IOFormatFactory<Float> {
override fun build(context: Context, meta: Meta): IOFormat<Float> = this
override val name: Name = "float32".asName()
override val type: KType get() = typeOf<Float>()
override fun writeTo(sink: Sink, obj: Float) {
sink.writeFloat(obj)
}
override fun readFrom(source: Source): Float = source.readFloat()
}
public object DoubleIOFormat : IOFormat<Double>, IOFormatFactory<Double> {
override fun build(context: Context, meta: Meta): IOFormat<Double> = this
override val name: Name = "double".asName()
override val name: Name = "float64".asName()
override val type: KType get() = typeOf<Double>()
override fun writeObject(output: Output, obj: Double) {
output.writeDouble(obj)
override fun writeTo(sink: Sink, obj: Double) {
sink.writeLong(obj.toBits())
}
override fun readObject(input: Input): Double = input.readDouble()
override fun readFrom(source: Source): Double = source.readDouble()
}

24
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/JsonMetaFormat.kt
View File

@ -1,10 +1,10 @@
@file:Suppress("UNUSED_PARAMETER")
package space.kscience.dataforge.io
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.readString
import kotlinx.io.writeString
import kotlinx.serialization.json.Json
import kotlinx.serialization.json.JsonElement
import space.kscience.dataforge.context.Context
@ -18,13 +18,13 @@ import space.kscience.dataforge.meta.toMeta
*/
public class JsonMetaFormat(private val json: Json = DEFAULT_JSON) : MetaFormat {
override fun writeMeta(output: Output, meta: Meta, descriptor: MetaDescriptor?) {
override fun writeMeta(sink: Sink, meta: Meta, descriptor: MetaDescriptor?) {
val jsonElement = meta.toJson(descriptor)
output.writeUtf8String(json.encodeToString(JsonElement.serializer(), jsonElement))
sink.writeString(json.encodeToString(JsonElement.serializer(), jsonElement))
}
override fun readMeta(input: Input, descriptor: MetaDescriptor?): Meta {
val str = input.readUtf8String()//readByteArray().decodeToString()
override fun readMeta(source: Source, descriptor: MetaDescriptor?): Meta {
val str = source.readString()
val jsonElement = json.parseToJsonElement(str)
return jsonElement.toMeta(descriptor)
}
@ -39,10 +39,10 @@ public class JsonMetaFormat(private val json: Json = DEFAULT_JSON) : MetaFormat
private val default = JsonMetaFormat()
override fun writeMeta(output: Output, meta: Meta, descriptor: MetaDescriptor?): Unit =
default.run { writeMeta(output, meta, descriptor) }
override fun writeMeta(sink: Sink, meta: Meta, descriptor: MetaDescriptor?): Unit =
default.run { writeMeta(sink, meta, descriptor) }
override fun readMeta(input: Input, descriptor: MetaDescriptor?): Meta =
default.run { readMeta(input, descriptor) }
override fun readMeta(source: Source, descriptor: MetaDescriptor?): Meta =
default.run { readMeta(source, descriptor) }
}
}

28
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/MetaFormat.kt
View File

@ -1,15 +1,15 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.ByteReadPacket
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import io.ktor.utils.io.core.use
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.buffered
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.io.MetaFormatFactory.Companion.META_FORMAT_TYPE
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.descriptors.MetaDescriptor
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.names.asName
import space.kscience.dataforge.names.plus
@ -23,22 +23,22 @@ public interface MetaFormat : IOFormat<Meta> {
override val type: KType get() = typeOf<Meta>()
override fun writeObject(output: Output, obj: Meta) {
writeMeta(output, obj, null)
override fun writeTo(sink: Sink, obj: Meta) {
writeMeta(sink, obj, null)
}
override fun readObject(input: Input): Meta = readMeta(input)
override fun readFrom(source: Source): Meta = readMeta(source)
public fun writeMeta(
output: Output,
sink: Sink,
meta: Meta,
descriptor: MetaDescriptor? = null,
)
public fun readMeta(input: Input, descriptor: MetaDescriptor? = null): Meta
public fun readMeta(source: Source, descriptor: MetaDescriptor? = null): Meta
}
@Type(META_FORMAT_TYPE)
@DfId(META_FORMAT_TYPE)
public interface MetaFormatFactory : IOFormatFactory<Meta>, MetaFormat {
public val shortName: String
@ -57,15 +57,13 @@ public interface MetaFormatFactory : IOFormatFactory<Meta>, MetaFormat {
public fun Meta.toString(format: MetaFormat): String = ByteArray {
format.run {
writeObject(this@ByteArray, this@toString)
writeTo(this@ByteArray, this@toString)
}
}.decodeToString()
public fun Meta.toString(formatFactory: MetaFormatFactory): String = toString(formatFactory.build(Global, Meta.EMPTY))
public fun MetaFormat.parse(str: String): Meta {
return ByteReadPacket(str.encodeToByteArray()).use { readObject(it) }
}
public fun MetaFormat.parse(str: String): Meta = readFrom(StringSource(str).buffered())
public fun MetaFormatFactory.parse(str: String, formatMeta: Meta): Meta = build(Global, formatMeta).parse(str)

91
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/TaggedEnvelopeFormat.kt
View File

@ -1,6 +1,7 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.*
import kotlinx.io.*
import kotlinx.io.bytestring.decodeToString
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.meta.Meta
@ -18,7 +19,7 @@ import space.kscience.dataforge.names.plus
public class TaggedEnvelopeFormat(
public val io: IOPlugin,
public val version: VERSION = VERSION.DF02,
public val metaFormatFactory: MetaFormatFactory = JsonMetaFormat
public val metaFormatFactory: MetaFormatFactory = JsonMetaFormat,
) : EnvelopeFormat {
// private val metaFormat = io.metaFormat(metaFormatKey)
@ -26,59 +27,60 @@ public class TaggedEnvelopeFormat(
private fun Tag.toBinary() = Binary {
writeRawString(START_SEQUENCE)
writeRawString(version.name)
write(START_SEQUENCE)
writeString(version.name)
writeShort(metaFormatKey)
writeUInt(metaSize)
when (version) {
VERSION.DF02 -> {
writeUInt(dataSize.toUInt())
}
VERSION.DF03 -> {
writeULong(dataSize)
}
}
writeRawString(END_SEQUENCE)
write(END_SEQUENCE)
}
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
) {
val metaFormat = metaFormatFactory.build(io.context, Meta.EMPTY)
val metaBytes = Binary(obj.meta,metaFormat)
val metaBytes = Binary(obj.meta, metaFormat)
val actualSize: ULong = (obj.data?.size ?: 0).toULong()
val tag = Tag(metaFormatFactory.key, metaBytes.size.toUInt() + 2u, actualSize)
output.writeBinary(tag.toBinary())
output.writeBinary(metaBytes)
output.writeRawString("\r\n")
sink.writeBinary(tag.toBinary())
sink.writeBinary(metaBytes)
sink.writeString("\r\n")
obj.data?.let {
output.writeBinary(it)
sink.writeBinary(it)
}
}
/**
* Read an envelope from input into memory
*
* @param input an input to read from
* @param source an input to read from
* @param formats a collection of meta formats to resolve
*/
override fun readObject(input: Input): Envelope {
val tag = input.readTag(this.version)
override fun readFrom(source: Source): Envelope {
val tag = source.readTag(this.version)
val metaFormat = io.resolveMetaFormat(tag.metaFormatKey)
?: error("Meta format with key ${tag.metaFormatKey} not found")
val metaBinary = input.readBinary(tag.metaSize.toInt())
val metaBinary = source.readBinary(tag.metaSize.toInt())
val meta: Meta = metaFormat.readObjectFrom(metaBinary)
val meta: Meta = metaFormat.readFrom(metaBinary)
val data = input.readBinary(tag.dataSize.toInt())
val data = source.readBinary(tag.dataSize.toInt())
return SimpleEnvelope(meta, data)
}
override fun readObject(binary: Binary): Envelope = binary.read{
override fun readFrom(binary: Binary): Envelope = binary.read {
val tag = readTag(version)
val metaFormat = io.resolveMetaFormat(tag.metaFormatKey)
@ -86,7 +88,7 @@ public class TaggedEnvelopeFormat(
val metaBinary = readBinary(tag.metaSize.toInt())
val meta: Meta = metaFormat.readObjectFrom(metaBinary)
val meta: Meta = metaFormat.readFrom(metaBinary)
SimpleEnvelope(meta, binary.view((version.tagSize + tag.metaSize).toInt(), tag.dataSize.toInt()))
@ -104,8 +106,8 @@ public class TaggedEnvelopeFormat(
}
public companion object : EnvelopeFormatFactory {
private const val START_SEQUENCE = "#~"
private const val END_SEQUENCE = "~#\r\n"
private val START_SEQUENCE = "#~".toAsciiByteString()
private val END_SEQUENCE = "~#\r\n".toAsciiByteString()
override val name: Name = EnvelopeFormatFactory.ENVELOPE_FACTORY_NAME + "tagged"
@ -121,53 +123,48 @@ public class TaggedEnvelopeFormat(
return TaggedEnvelopeFormat(io, version)
}
private fun Input.readTag(version: VERSION): Tag {
val start = readRawString(2)
private fun Source.readTag(version: VERSION): Tag {
val start = readByteString(2)
if (start != START_SEQUENCE) error("The input is not an envelope")
val versionString = readRawString(4)
if (version.name != versionString) error("Wrong version of DataForge: expected $version but found $versionString")
val versionString = readByteString(4)
if (version.name.toAsciiByteString() != versionString) error("Wrong version of DataForge: expected $version but found $versionString")
val metaFormatKey = readShort()
val metaLength = readUInt()
val dataLength: ULong = when (version) {
VERSION.DF02 -> readUInt().toULong()
VERSION.DF03 -> readULong()
}
val end = readRawString(4)
val end = readByteString(4)
if (end != END_SEQUENCE) error("The input is not an envelope")
return Tag(metaFormatKey, metaLength, dataLength)
}
override fun peekFormat(io: IOPlugin, binary: Binary): EnvelopeFormat? {
return try {
binary.read {
val header = readRawString(6)
return@read when (header.substring(2..5)) {
VERSION.DF02.name -> TaggedEnvelopeFormat(io, VERSION.DF02)
VERSION.DF03.name -> TaggedEnvelopeFormat(io, VERSION.DF03)
else -> null
}
override fun peekFormat(io: IOPlugin, binary: Binary): EnvelopeFormat? = try {
binary.read {
val header = readByteString(6)
when (header.substring(2, 6).decodeToString()) {
VERSION.DF02.name -> TaggedEnvelopeFormat(io, VERSION.DF02)
VERSION.DF03.name -> TaggedEnvelopeFormat(io, VERSION.DF03)
else -> null
}
} catch (ex: Exception) {
null
}
} catch (ex: Exception) {
null
}
private val default by lazy { build(Global, Meta.EMPTY) }
override fun readObject(binary: Binary): Envelope =
default.run { readObject(binary) }
override fun readFrom(binary: Binary): Envelope =
default.run { readFrom(binary) }
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
): Unit = default.run {
writeObject(
output,
obj,
)
writeTo(sink, obj)
}
override fun readObject(input: Input): Envelope = default.readObject(input)
override fun readFrom(source: Source): Envelope = default.readFrom(source)
}
}

62
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/TaglessEnvelopeFormat.kt
View File

@ -1,9 +1,9 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.ByteReadPacket
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import io.ktor.utils.io.core.readUTF8UntilDelimiterTo
import kotlinx.io.*
import kotlinx.io.bytestring.ByteString
import kotlinx.io.bytestring.encodeToByteString
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.meta.Meta
@ -28,35 +28,36 @@ public class TaglessEnvelopeFormat(
// writeFully("#? $key: $value;\r\n".encodeToByteArray())
// }
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
) {
val metaFormat = metaFormatFactory.build(this.io.context, meta)
//printing header
output.writeRawString(TAGLESS_ENVELOPE_HEADER + "\r\n")
sink.write(TAGLESS_ENVELOPE_HEADER)
sink.writeString("\r\n")
//Printing meta
if (!obj.meta.isEmpty()) {
val metaBinary = Binary(obj.meta, metaFormat)
output.writeUtf8String(META_START + "-${metaFormatFactory.shortName}\r\n")
output.writeBinary(metaBinary)
output.writeRawString("\r\n")
sink.writeString(META_START + "-${metaFormatFactory.shortName}\r\n")
sink.writeBinary(metaBinary)
sink.writeString("\r\n")
}
//Printing data
obj.data?.let { data ->
//val actualSize: Int = envelope.data?.size ?: 0
output.writeUtf8String(DATA_START + "\r\n")
output.writeBinary(data)
sink.writeString(DATA_START + "\r\n")
sink.writeBinary(data)
}
}
override fun readObject(input: Input): Envelope {
override fun readFrom(source: Source): Envelope {
//read preamble
input.discardWithSeparator(
TAGLESS_ENVELOPE_HEADER.encodeToByteArray(),
source.discardWithSeparator(
TAGLESS_ENVELOPE_HEADER,
atMost = 1024,
)
@ -64,22 +65,22 @@ public class TaglessEnvelopeFormat(
var data: Binary? = null
input.discardWithSeparator(
source.discardWithSeparator(
SEPARATOR_PREFIX,
atMost = 1024,
)
var header: String = ByteArray {
input.readUTF8UntilDelimiterTo(this, "\n")
source.readWithSeparatorTo(this, "\n".encodeToByteString())
}.decodeToString()
while (!input.endOfInput) {
while (!source.exhausted()) {
val block = ByteArray {
input.readWithSeparatorTo(this, SEPARATOR_PREFIX)
source.readWithSeparatorTo(this, SEPARATOR_PREFIX)
}
val nextHeader = ByteArray {
input.readWithSeparatorTo(this, "\n".encodeToByteArray())
source.readWithSeparatorTo(this, "\n".encodeToByteString())
}.decodeToString()
//terminate on end
@ -89,7 +90,7 @@ public class TaglessEnvelopeFormat(
if (header.startsWith("META")) {
//TODO check format
val metaFormat: MetaFormatFactory = JsonMetaFormat
meta = metaFormat.readMeta(ByteReadPacket(block))
meta = metaFormat.readMeta(ByteArraySource(block).buffered())
}
if (header.startsWith("DATA")) {
@ -111,9 +112,9 @@ public class TaglessEnvelopeFormat(
public const val TAGLESS_ENVELOPE_TYPE: String = "tagless"
public val SEPARATOR_PREFIX: ByteArray = "\n#~".encodeToByteArray()
public val SEPARATOR_PREFIX: ByteString = "\n#~".encodeToByteString()
public const val TAGLESS_ENVELOPE_HEADER: String = "#~DFTL"
public val TAGLESS_ENVELOPE_HEADER: ByteString = "#~DFTL".encodeToByteString()
// public const val META_START_PROPERTY: String = "metaSeparator"
public const val META_START: String = "#~META"
@ -131,24 +132,21 @@ public class TaglessEnvelopeFormat(
private val default by lazy { build(Global, Meta.EMPTY) }
override fun readObject(binary: Binary): Envelope = default.run { readObject(binary) }
override fun readFrom(binary: Binary): Envelope = default.run { readFrom(binary) }
override fun writeObject(
output: Output,
override fun writeTo(
sink: Sink,
obj: Envelope,
): Unit = default.run {
writeObject(
output,
obj,
)
writeTo(sink, obj)
}
override fun readObject(input: Input): Envelope = default.readObject(input)
override fun readFrom(source: Source): Envelope = default.readFrom(source)
override fun peekFormat(io: IOPlugin, binary: Binary): EnvelopeFormat? {
return try {
binary.read {
val string = readRawString(TAGLESS_ENVELOPE_HEADER.length)
val string = readByteString(TAGLESS_ENVELOPE_HEADER.size)
return@read if (string == TAGLESS_ENVELOPE_HEADER) {
TaglessEnvelopeFormat(io)
} else {

182
dataforge-io/src/commonMain/kotlin/space/kscience/dataforge/io/ioMisc.kt
View File

@ -1,40 +1,41 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.bits.Memory
import io.ktor.utils.io.charsets.Charsets
import io.ktor.utils.io.charsets.decodeExactBytes
import io.ktor.utils.io.core.*
import io.ktor.utils.io.core.internal.ChunkBuffer
import kotlinx.io.*
import kotlinx.io.bytestring.ByteString
import kotlinx.io.bytestring.decodeToString
import kotlinx.io.bytestring.encodeToByteString
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.misc.DFExperimental
import kotlin.math.min
public fun Output.writeRawString(str: String) {
writeFully(str.toByteArray(Charsets.ISO_8859_1))
/**
* Convert a string literal, containing only ASCII characters to a [ByteString].
* Throws an error if there are non-ASCII characters.
*/
public fun String.toAsciiByteString(): ByteString {
val bytes = ByteArray(length) {
val char = get(it)
val code = char.code
if (code > Byte.MAX_VALUE) error("Symbol $char is not ASCII symbol") else code.toByte()
}
return ByteString(bytes)
}
public fun Output.writeUtf8String(str: String) {
writeFully(str.encodeToByteArray())
}
public inline fun Buffer(block: Sink.() -> Unit): Buffer = Buffer().apply(block)
public fun Input.readRawString(size: Int): String {
return Charsets.ISO_8859_1.newDecoder().decodeExactBytes(this, size)
}
//public fun Source.readSafeUtf8Line(): String = readUTF8Line() ?: error("Line not found")
public fun Input.readUtf8String(): String = readBytes().decodeToString()
public inline fun ByteArray(block: Sink.() -> Unit): ByteArray =
Buffer(block).readByteArray()
public fun Input.readSafeUtf8Line(): String = readUTF8Line() ?: error("Line not found")
public inline fun ByteArray(block: Output.() -> Unit): ByteArray =
buildPacket(block).readBytes()
public inline fun Binary(block: Output.() -> Unit): Binary =
public inline fun Binary(block: Sink.() -> Unit): Binary =
ByteArray(block).asBinary()
public operator fun Binary.get(range: IntRange): Binary = view(range.first, range.last - range.first)
/**
* Return inferred [EnvelopeFormat] if only one format could read given file. If no format accepts the binary, return null. If
* multiple formats accepts binary, throw an error.
* multiple formats accept binary, throw an error.
*/
public fun IOPlugin.peekBinaryEnvelopeFormat(binary: Binary): EnvelopeFormat? {
val formats = envelopeFormatFactories.mapNotNull { factory ->
@ -56,7 +57,7 @@ public fun IOPlugin.readEnvelope(
binary: Binary,
readNonEnvelopes: Boolean = false,
formatPicker: IOPlugin.(Binary) -> EnvelopeFormat? = IOPlugin::peekBinaryEnvelopeFormat,
): Envelope = formatPicker(binary)?.readObject(binary) ?: if (readNonEnvelopes) {
): Envelope = formatPicker(binary)?.readFrom(binary) ?: if (readNonEnvelopes) {
// if no format accepts file, read it as binary
Envelope(Meta.EMPTY, binary)
} else error("Can't infer format for $binary")
@ -96,74 +97,139 @@ private class RingByteArray(
else -> inputArray.indices.all { inputArray[it] == get(it) }
}
fun contentEquals(byteString: ByteString): Boolean = when {
byteString.size != buffer.size -> false
size < buffer.size -> false
else -> (0 until byteString.size).all { byteString[it] == get(it) }
}
}
private fun RingByteArray.toArray(): ByteArray = ByteArray(size) { get(it) }
/**
* Read [Input] into [output] until designated multibyte [separator] and optionally continues until
* Read [Source] into [output] until designated multibyte [separator] and optionally continues until
* the end of the line after it. Throw error if [separator] not found and [atMost] bytes are read.
* Also fails if [separator] not found until the end of input.
*
* Separator itself is not read into Output.
* The Separator itself is not read into [Sink].
*
* @param errorOnEof if true error is thrown if separator is never encountered
*
* @return bytes actually being read, including separator
*/
public fun Input.readWithSeparatorTo(
output: Output,
separator: ByteArray,
public fun Source.readWithSeparatorTo(
output: Sink?,
separator: ByteString,
atMost: Int = Int.MAX_VALUE,
errorOnEof: Boolean = false,
): Int {
var counter = 0
val rb = RingByteArray(ByteArray(separator.size))
takeWhile { buffer ->
while (buffer.canRead()) {
val byte = buffer.readByte()
counter++
if (counter >= atMost) error("Maximum number of bytes to be read $atMost reached.")
rb.push(byte)
if (rb.contentEquals(separator)) {
return counter
} else if (rb.isFull()) {
output.writeByte(rb[0])
}
while (!exhausted()) {
val byte = readByte()
counter++
if (counter >= atMost) error("Maximum number of bytes to be read $atMost reached.")
rb.push(byte)
if (rb.contentEquals(separator)) {
return counter
} else if (rb.isFull()) {
output?.writeByte(rb[0])
}
!endOfInput
}
if (errorOnEof) {
error("Read to the end of input without encountering ${separator.decodeToString()}")
} else {
for(i in 1 until rb.size){
output.writeByte(rb[i])
for (i in 1 until rb.size) {
output?.writeByte(rb[i])
}
counter += (rb.size - 1)
return counter
}
}
public fun Input.discardLine(): Int {
return discardUntilDelimiter('\n'.code.toByte()).also {
discard(1)
}.toInt() + 1
}
public fun Input.discardWithSeparator(
separator: ByteArray,
/**
* Discard all bytes until [separator] is encountered. Separator is discarded sa well.
* Return the total number of bytes read.
*/
public fun Source.discardWithSeparator(
separator: ByteString,
atMost: Int = Int.MAX_VALUE,
errorOnEof: Boolean = false,
): Int {
val dummy: Output = object : Output(ChunkBuffer.Pool) {
override fun closeDestination() {
// Do nothing
}
): Int = readWithSeparatorTo(null, separator, atMost, errorOnEof)
override fun flush(source: Memory, offset: Int, length: Int) {
// Do nothing
}
/**
* Discard all symbol until newline is discovered. Carriage return is not discarded.
*/
public fun Source.discardLine(
atMost: Int = Int.MAX_VALUE,
errorOnEof: Boolean = false,
): Int = discardWithSeparator("\n".encodeToByteString(), atMost, errorOnEof)
/**
* A [Source] based on [ByteArray]
*/
internal class ByteArraySource(
private val byteArray: ByteArray,
private val offset: Int = 0,
private val size: Int = byteArray.size - offset,
) : RawSource {
init {
require(offset >= 0) { "Offset must be positive" }
require(offset + size <= byteArray.size) { "End index is ${offset + size}, but the array size is ${byteArray.size}" }
}
return readWithSeparatorTo(dummy, separator, atMost, errorOnEof)
private var pointer = offset
override fun close() {
// Do nothing
}
override fun readAtMostTo(sink: Buffer, byteCount: Long): Long {
if (pointer == offset + size) return -1
val byteRead = min(byteCount.toInt(), (size + offset - pointer))
sink.write(byteArray, pointer, pointer + byteRead)
pointer += byteRead
return byteRead.toLong()
}
}
/**
* A [Source] based on [String]
*/
public class StringSource(
public val string: String,
public val offset: Int = 0,
public val size: Int = string.length - offset,
) : RawSource {
private var pointer = offset
override fun close() {
// Do nothing
}
override fun readAtMostTo(sink: Buffer, byteCount: Long): Long {
if (pointer == offset + size) return -1
val byteRead = min(byteCount.toInt(), (size + offset - pointer))
sink.writeString(string, pointer, pointer + byteRead)
pointer += byteRead
return byteRead.toLong()
}
}
public fun Sink.writeDouble(value: Double) {
writeLong(value.toBits())
}
public fun Source.readDouble(): Double = Double.fromBits(readLong())
public fun Sink.writeFloat(value: Float) {
writeInt(value.toBits())
}
public fun Source.readFloat(): Float = Float.fromBits(readInt())

1
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/BinaryTest.kt
View File

@ -1,6 +1,5 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.readInt
import kotlin.test.Test
import kotlin.test.assertEquals

17
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/EnvelopeFormatTest.kt
View File

@ -1,6 +1,7 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.readBytes
import kotlinx.io.readByteArray
import kotlinx.io.writeString
import kotlin.test.Test
import kotlin.test.assertEquals
@ -12,7 +13,7 @@ class EnvelopeFormatTest {
"d" put 22.2
}
data {
writeUtf8String("12345678")
writeString("12345678")
}
}
@ -22,7 +23,7 @@ class EnvelopeFormatTest {
val res = readFromByteArray(byteArray)
assertEquals(envelope.meta, res.meta)
val bytes = res.data?.read {
readBytes()
readByteArray()
}
assertEquals("12345678", bytes?.decodeToString())
}
@ -34,13 +35,13 @@ class EnvelopeFormatTest {
val res = readFromByteArray(byteArray)
assertEquals(envelope.meta, res.meta)
val bytes = res.data?.read {
readBytes()
readByteArray()
}
assertEquals("12345678", bytes?.decodeToString())
assertEquals("12345678", bytes?.decodeToString())
}
@Test
fun testManualDftl(){
fun testManualDftl() {
val envelopeString = """
#~DFTL
#~META
@ -56,8 +57,8 @@ class EnvelopeFormatTest {
val res = TaglessEnvelopeFormat.readFromByteArray(envelopeString.encodeToByteArray())
assertEquals(envelope.meta, res.meta)
val bytes = res.data?.read {
readBytes()
readByteArray()
}
assertEquals("12345678", bytes?.decodeToString())
assertEquals("12345678", bytes?.decodeToString())
}
}

21
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/IOTest.kt
View File

@ -1,8 +1,9 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.ByteReadPacket
import io.ktor.utils.io.core.readBytes
import io.ktor.utils.io.core.readUTF8Line
import kotlinx.io.buffered
import kotlinx.io.bytestring.encodeToByteString
import kotlinx.io.readByteArray
import kotlinx.io.readLine
import kotlin.test.Test
import kotlin.test.assertEquals
import kotlin.test.assertFails
@ -11,9 +12,9 @@ class IOTest {
@Test
fun readBytes() {
val bytes = ByteArray(8) { it.toByte() }
val input = ByteReadPacket(bytes)
@Suppress("UNUSED_VARIABLE") val first = input.readBytes(4)
val second = input.readBytes(4)
val input = ByteArraySource(bytes).buffered()
@Suppress("UNUSED_VARIABLE") val first = input.readByteArray(4)
val second = input.readByteArray(4)
assertEquals(4.toByte(), second[0])
}
@ -31,25 +32,25 @@ class IOTest {
binary.read {
val array = ByteArray {
val read = readWithSeparatorTo(this, "---".encodeToByteArray()) + discardLine()
val read = readWithSeparatorTo(this, "---".encodeToByteString()) + discardLine()
assertEquals(12, read)
}
assertEquals("""
aaa
bbb
""".trimIndent(),array.decodeToString().trim())
assertEquals("ccc", readUTF8Line()?.trim())
assertEquals("ccc", readLine()?.trim())
}
assertFails {
binary.read {
discardWithSeparator("---".encodeToByteArray(), atMost = 3 )
discardWithSeparator("---".encodeToByteString(), atMost = 3 )
}
}
assertFails {
binary.read{
discardWithSeparator("-+-".encodeToByteArray(), errorOnEof = true)
discardWithSeparator("-+-".encodeToByteString(), errorOnEof = true)
}
}

4
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/MetaFormatTest.kt
View File

@ -7,11 +7,11 @@ import kotlin.test.assertEquals
fun Meta.toByteArray(format: MetaFormat = JsonMetaFormat) = ByteArray {
format.writeObject(this@ByteArray, this@toByteArray)
format.writeTo(this@ByteArray, this@toByteArray)
}
fun MetaFormat.fromByteArray(packet: ByteArray): Meta {
return packet.asBinary().read { readObject(this) }
return packet.asBinary().read { readFrom(this) }
}
class MetaFormatTest {

5
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/MultipartTest.kt
View File

@ -1,5 +1,6 @@
package space.kscience.dataforge.io
import kotlinx.io.writeString
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.meta.get
import space.kscience.dataforge.meta.int
@ -18,9 +19,9 @@ class MultipartTest {
"value" put it
}
data {
writeUtf8String("Hello World $it")
writeString("Hello World $it")
repeat(300) {
writeRawString("$it ")
writeString("$it ")
}
}
}

9
dataforge-io/src/commonTest/kotlin/space/kscience/dataforge/io/ioTestUtils.kt
View File

@ -1,12 +1,11 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.ByteReadPacket
import io.ktor.utils.io.core.use
import kotlinx.io.buffered
fun <T : Any> IOFormat<T>.writeToByteArray(obj: T): ByteArray = ByteArray {
writeObject(this, obj)
writeTo(this, obj)
}
fun <T : Any> IOFormat<T>.readFromByteArray(array: ByteArray): T = ByteReadPacket(array).use {
readObject(it)
fun <T : Any> IOFormat<T>.readFromByteArray(array: ByteArray): T = ByteArraySource(array).buffered().use {
readFrom(it)
}

33
dataforge-io/src/jvmMain/kotlin/space/kscience/dataforge/io/fileIO.kt
View File

@ -1,8 +1,11 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.*
import io.ktor.utils.io.streams.asOutput
import kotlinx.coroutines.runBlocking
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.asSink
import kotlinx.io.buffered
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.descriptors.MetaDescriptor
import space.kscience.dataforge.meta.isEmpty
@ -23,18 +26,18 @@ internal class PathBinary(
override val size: Int = Files.size(path).toInt() - fileOffset,
) : Binary {
override fun <R> read(offset: Int, atMost: Int, block: Input.() -> R): R = runBlocking {
override fun <R> read(offset: Int, atMost: Int, block: Source.() -> R): R = runBlocking {
readSuspend(offset, atMost, block)
}
override suspend fun <R> readSuspend(offset: Int, atMost: Int, block: suspend Input.() -> R): R {
override suspend fun <R> readSuspend(offset: Int, atMost: Int, block: suspend Source.() -> R): R {
val actualOffset = offset + fileOffset
val actualSize = min(atMost, size - offset)
val array = path.inputStream().use {
it.skip(actualOffset.toLong())
it.readNBytes(actualSize)
}
return ByteReadPacket(array).block()
return ByteArraySource(array).buffered().use { it.block() }
}
override fun view(offset: Int, binarySize: Int) = PathBinary(path, fileOffset + offset, binarySize)
@ -42,40 +45,40 @@ internal class PathBinary(
public fun Path.asBinary(): Binary = PathBinary(this)
public fun <R> Path.read(block: Input.() -> R): R = asBinary().read(block = block)
public fun <R> Path.read(block: Source.() -> R): R = asBinary().read(block = block)
/**
* Write a live output to a newly created file. If file does not exist, throws error
*/
public fun Path.write(block: Output.() -> Unit): Unit {
public fun Path.write(block: Sink.() -> Unit): Unit {
val stream = Files.newOutputStream(this, StandardOpenOption.WRITE, StandardOpenOption.CREATE_NEW)
stream.asOutput().use(block)
stream.asSink().buffered().use(block)
}
/**
* Create a new file or append to exiting one with given output [block]
*/
public fun Path.append(block: Output.() -> Unit): Unit {
public fun Path.append(block: Sink.() -> Unit): Unit {
val stream = Files.newOutputStream(
this,
StandardOpenOption.WRITE, StandardOpenOption.APPEND, StandardOpenOption.CREATE
)
stream.asOutput().use(block)
stream.asSink().buffered().use(block)
}
/**
* Create a new file or replace existing one using given output [block]
*/
public fun Path.rewrite(block: Output.() -> Unit): Unit {
public fun Path.rewrite(block: Sink.() -> Unit): Unit {
val stream = Files.newOutputStream(
this,
StandardOpenOption.WRITE, StandardOpenOption.TRUNCATE_EXISTING, StandardOpenOption.CREATE
)
stream.asOutput().use(block)
stream.asSink().buffered().use(block)
}
@DFExperimental
public fun EnvelopeFormat.readFile(path: Path): Envelope = readObject(path.asBinary())
public fun EnvelopeFormat.readFile(path: Path): Envelope = readFrom(path.asBinary())
/**
* Resolve IOFormat based on type
@ -235,7 +238,7 @@ public fun IOPlugin.writeEnvelopeFile(
envelopeFormat: EnvelopeFormat = TaggedEnvelopeFormat,
) {
path.rewrite {
envelopeFormat.writeObject(this, envelope)
envelopeFormat.writeTo(this, envelope)
}
}
@ -260,7 +263,7 @@ public fun IOPlugin.writeEnvelopeDirectory(
val dataFile = path.resolve(IOPlugin.DATA_FILE_NAME)
dataFile.write {
envelope.data?.read {
val copied = copyTo(this@write)
val copied = transferTo(this@write)
if (copied != envelope.data?.size?.toLong()) {
error("The number of copied bytes does not equal data size")
}

12
dataforge-io/src/jvmMain/kotlin/space/kscience/dataforge/io/resourceIO.kt
View File

@ -1,9 +1,11 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.streams.asInput
import kotlinx.io.Source
import kotlinx.io.asSource
import kotlinx.io.buffered
public fun IOPlugin.resource(name: String): Binary? = context.javaClass.getResource(name)?.readBytes()?.asBinary()
public inline fun <R> IOPlugin.readResource(name: String, block: Input.() -> R): R =
context.javaClass.getResource(name)?.openStream()?.asInput()?.block() ?: error("Can't read resource $name")
public fun IOPlugin.resource(name: String): Binary? = { }.javaClass.getResource(name)?.readBytes()?.asBinary()
public inline fun <R> IOPlugin.readResource(name: String, block: Source.() -> R): R =
{ }.javaClass.getResource(name)?.openStream()?.asSource()?.buffered()?.block() ?: error("Can't read resource $name")

1
dataforge-io/src/jvmMain/kotlin/space/kscience/dataforge/io/workDirectory.kt
View File

@ -1,7 +1,6 @@
package space.kscience.dataforge.io
import space.kscience.dataforge.context.ContextBuilder
import space.kscience.dataforge.meta.get
import space.kscience.dataforge.meta.set
import space.kscience.dataforge.meta.string
import java.nio.file.Path

1
dataforge-io/src/jvmTest/kotlin/space/kscience/dataforge/io/FileBinaryTest.kt
View File

@ -1,6 +1,5 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.writeDouble
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.misc.DFExperimental
import java.nio.file.Files

1
dataforge-io/src/jvmTest/kotlin/space/kscience/dataforge/io/FileEnvelopeTest.kt
View File

@ -1,6 +1,5 @@
package space.kscience.dataforge.io
import io.ktor.utils.io.core.writeDouble
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.misc.DFExperimental
import java.nio.file.Files

17
dataforge-meta/README.md
View File

@ -6,27 +6,18 @@ Meta definition and basic operations on meta
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-meta:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-meta:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-meta:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-meta:0.6.2-dev-2")
implementation("space.kscience:dataforge-meta:0.7.0")
}
```

161
dataforge-meta/api/dataforge-meta.api
View File

@ -45,9 +45,9 @@ public final class space/kscience/dataforge/meta/False : space/kscience/dataforg
public final class space/kscience/dataforge/meta/JsonMetaKt {
public static final fun getJSON_ARRAY_KEY (Lspace/kscience/dataforge/meta/Meta$Companion;)Ljava/lang/String;
public static final fun toJson (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;)Lkotlinx/serialization/json/JsonObject;
public static final fun toJson (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;)Lkotlinx/serialization/json/JsonElement;
public static final fun toJson (Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;)Lkotlinx/serialization/json/JsonElement;
public static synthetic fun toJson$default (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;ILjava/lang/Object;)Lkotlinx/serialization/json/JsonObject;
public static synthetic fun toJson$default (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;ILjava/lang/Object;)Lkotlinx/serialization/json/JsonElement;
public static synthetic fun toJson$default (Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;ILjava/lang/Object;)Lkotlinx/serialization/json/JsonElement;
public static final fun toMeta (Lkotlinx/serialization/json/JsonElement;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun toMeta (Lkotlinx/serialization/json/JsonObject;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;)Lspace/kscience/dataforge/meta/SealedMeta;
@ -59,11 +59,11 @@ public final class space/kscience/dataforge/meta/JsonMetaKt {
public final class space/kscience/dataforge/meta/Laminate : space/kscience/dataforge/meta/TypedMeta {
public static final field Companion Lspace/kscience/dataforge/meta/Laminate$Companion;
public fun equals (Ljava/lang/Object;)Z
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Laminate;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public fun getItems ()Ljava/util/Map;
public final fun getLayers ()Ljava/util/List;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Laminate;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public fun getValue ()Lspace/kscience/dataforge/meta/Value;
public fun hashCode ()I
public final fun merge ()Lspace/kscience/dataforge/meta/SealedMeta;
@ -122,8 +122,8 @@ public abstract interface class space/kscience/dataforge/meta/Meta : space/kscie
public static final field TYPE Ljava/lang/String;
public static final field VALUE_KEY Ljava/lang/String;
public abstract fun equals (Ljava/lang/Object;)Z
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public abstract fun getItems ()Ljava/util/Map;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public abstract fun getValue ()Lspace/kscience/dataforge/meta/Value;
public abstract fun hashCode ()I
public fun toMeta ()Lspace/kscience/dataforge/meta/Meta;
@ -137,10 +137,26 @@ public final class space/kscience/dataforge/meta/Meta$Companion {
public final fun equals (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/meta/Meta;)Z
public final fun getEMPTY ()Lspace/kscience/dataforge/meta/Meta;
public final fun hashCode (Lspace/kscience/dataforge/meta/Meta;)I
public final fun serializer ()Lkotlinx/serialization/KSerializer;
public final fun toString (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/String;
}
public abstract interface annotation class space/kscience/dataforge/meta/MetaBuilder : java/lang/annotation/Annotation {
public final class space/kscience/dataforge/meta/MetaBuilder : space/kscience/dataforge/meta/MutableMeta {
public fun <init> ()V
public fun <init> (Lspace/kscience/dataforge/meta/Value;Ljava/util/Map;)V
public synthetic fun <init> (Lspace/kscience/dataforge/meta/Value;Ljava/util/Map;ILkotlin/jvm/internal/DefaultConstructorMarker;)V
public fun equals (Ljava/lang/Object;)Z
public fun getItems ()Ljava/util/Map;
public fun getOrCreate (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MetaBuilder;
public synthetic fun getOrCreate (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public fun getValue ()Lspace/kscience/dataforge/meta/Value;
public fun hashCode ()I
public fun set (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public fun setValue (Lspace/kscience/dataforge/meta/Value;)V
public fun toString ()Ljava/lang/String;
}
public abstract interface annotation class space/kscience/dataforge/meta/MetaBuilderMarker : java/lang/annotation/Annotation {
}
public final class space/kscience/dataforge/meta/MetaDelegateKt {
@ -204,11 +220,7 @@ public final class space/kscience/dataforge/meta/MetaKt {
public static final fun getIndexed (Lspace/kscience/dataforge/meta/TypedMeta;Lspace/kscience/dataforge/names/Name;)Ljava/util/Map;
public static final fun getInt (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Integer;
public static final fun getLong (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Long;
public static final synthetic fun getNonNullable (Lspace/kscience/dataforge/meta/Meta;Ljava/lang/String;)Lspace/kscience/dataforge/meta/Meta;
public static final synthetic fun getNonNullable (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public static final synthetic fun getNonNullable (Lspace/kscience/dataforge/meta/Meta;Lspace/kscience/dataforge/names/NameToken;)Lspace/kscience/dataforge/meta/Meta;
public static final synthetic fun getNonNullable (Lspace/kscience/dataforge/meta/TypedMeta;Ljava/lang/String;)Lspace/kscience/dataforge/meta/TypedMeta;
public static final synthetic fun getNonNullable (Lspace/kscience/dataforge/meta/TypedMeta;Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public static final fun getNumber (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Number;
public static final fun getSelf (Lspace/kscience/dataforge/meta/TypedMeta;)Lspace/kscience/dataforge/meta/TypedMeta;
public static final fun getShort (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Short;
@ -223,7 +235,7 @@ public final class space/kscience/dataforge/meta/MetaKt {
}
public abstract interface class space/kscience/dataforge/meta/MetaProvider : space/kscience/dataforge/meta/ValueProvider {
public abstract fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public abstract fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun getValue (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Value;
}
@ -241,9 +253,10 @@ public final class space/kscience/dataforge/meta/MetaSerializer : kotlinx/serial
}
public abstract interface class space/kscience/dataforge/meta/MutableMeta : space/kscience/dataforge/meta/Meta, space/kscience/dataforge/meta/MutableMetaProvider {
public static final field Companion Lspace/kscience/dataforge/meta/MutableMeta$Companion;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public abstract fun getItems ()Ljava/util/Map;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public abstract fun getOrCreate (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public abstract fun getValue ()Lspace/kscience/dataforge/meta/Value;
public fun put (Ljava/lang/String;Ljava/lang/Enum;)V
@ -269,6 +282,10 @@ public abstract interface class space/kscience/dataforge/meta/MutableMeta : spac
public fun setValue (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Value;)V
}
public final class space/kscience/dataforge/meta/MutableMeta$Companion {
public final fun serializer ()Lkotlinx/serialization/KSerializer;
}
public final class space/kscience/dataforge/meta/MutableMetaDelegateKt {
public static final fun boolean (Lspace/kscience/dataforge/meta/MutableMetaProvider;Lspace/kscience/dataforge/names/Name;)Lkotlin/properties/ReadWriteProperty;
public static final fun boolean (Lspace/kscience/dataforge/meta/MutableMetaProvider;Lspace/kscience/dataforge/names/Name;Lkotlin/jvm/functions/Function0;)Lkotlin/properties/ReadWriteProperty;
@ -325,9 +342,9 @@ public final class space/kscience/dataforge/meta/MutableMetaDelegateKt {
}
public final class space/kscience/dataforge/meta/MutableMetaKt {
public static final fun MutableMeta ()Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static final fun MutableMeta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static synthetic fun MutableMeta$default (Lkotlin/jvm/functions/Function1;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static final fun ObservableMutableMeta ()Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static final fun ObservableMutableMeta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static synthetic fun ObservableMutableMeta$default (Lkotlin/jvm/functions/Function1;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public static final fun append (Lspace/kscience/dataforge/meta/MutableMeta;Ljava/lang/String;Lspace/kscience/dataforge/meta/Meta;)V
public static final fun append (Lspace/kscience/dataforge/meta/MutableMeta;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;)V
public static final fun append (Lspace/kscience/dataforge/meta/MutableMeta;Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
@ -343,7 +360,6 @@ public final class space/kscience/dataforge/meta/MutableMetaKt {
public static final fun set (Lspace/kscience/dataforge/meta/MutableMetaProvider;Ljava/lang/String;Ljava/lang/Iterable;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableMetaProvider;Ljava/lang/String;Lspace/kscience/dataforge/meta/Meta;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableMetaProvider;Lspace/kscience/dataforge/names/Name;Ljava/lang/Iterable;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableMetaProvider;Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableMetaProvider;Lspace/kscience/dataforge/names/NameToken;Lspace/kscience/dataforge/meta/Meta;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableTypedMeta;Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Value;)V
public static final fun set (Lspace/kscience/dataforge/meta/MutableValueProvider;Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Value;)V
@ -355,8 +371,8 @@ public final class space/kscience/dataforge/meta/MutableMetaKt {
}
public abstract interface class space/kscience/dataforge/meta/MutableMetaProvider : space/kscience/dataforge/meta/MetaProvider, space/kscience/dataforge/meta/MutableValueProvider {
public abstract fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public abstract fun setMeta (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public abstract fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public abstract fun set (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public abstract fun setValue (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Value;)V
}
@ -370,7 +386,7 @@ public final class space/kscience/dataforge/meta/MutableMetaSerializer : kotlinx
}
public abstract interface class space/kscience/dataforge/meta/MutableTypedMeta : space/kscience/dataforge/meta/MutableMeta, space/kscience/dataforge/meta/TypedMeta {
public abstract fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableTypedMeta;
public abstract fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableTypedMeta;
public abstract fun getOrCreate (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableTypedMeta;
}
@ -413,11 +429,11 @@ public final class space/kscience/dataforge/meta/ObservableMetaWrapperKt {
}
public abstract interface class space/kscience/dataforge/meta/ObservableMutableMeta : space/kscience/dataforge/meta/MutableMeta, space/kscience/dataforge/meta/MutableTypedMeta, space/kscience/dataforge/meta/ObservableMeta {
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableTypedMeta;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableTypedMeta;
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public abstract fun getOrCreate (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/ObservableMutableMeta;
}
@ -429,12 +445,12 @@ public abstract interface class space/kscience/dataforge/meta/ReadOnlySpecificat
public class space/kscience/dataforge/meta/Scheme : space/kscience/dataforge/meta/Configurable, space/kscience/dataforge/meta/MetaRepr, space/kscience/dataforge/meta/MutableMetaProvider, space/kscience/dataforge/meta/descriptors/Described {
public fun <init> ()V
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public final fun getDescriptor ()Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public synthetic fun getMeta ()Lspace/kscience/dataforge/meta/MutableMeta;
public final fun getMeta ()Lspace/kscience/dataforge/meta/ObservableMutableMeta;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/MutableMeta;
public fun setMeta (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public fun set (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Meta;)V
public fun setValue (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/Value;)V
public fun toMeta ()Lspace/kscience/dataforge/meta/Laminate;
public synthetic fun toMeta ()Lspace/kscience/dataforge/meta/Meta;
@ -463,13 +479,12 @@ public class space/kscience/dataforge/meta/SchemeSpec : space/kscience/dataforge
public final class space/kscience/dataforge/meta/SealedMeta : space/kscience/dataforge/meta/TypedMeta {
public static final field Companion Lspace/kscience/dataforge/meta/SealedMeta$Companion;
public synthetic fun <init> (ILspace/kscience/dataforge/meta/Value;Ljava/util/Map;Lkotlinx/serialization/internal/SerializationConstructorMarker;)V
public fun <init> (Lspace/kscience/dataforge/meta/Value;Ljava/util/Map;)V
public fun equals (Ljava/lang/Object;)Z
public fun getItems ()Ljava/util/Map;
public fun getValue ()Lspace/kscience/dataforge/meta/Value;
public fun hashCode ()I
public fun toString ()Ljava/lang/String;
public static final synthetic fun write$Self (Lspace/kscience/dataforge/meta/SealedMeta;Lkotlinx/serialization/encoding/CompositeEncoder;Lkotlinx/serialization/descriptors/SerialDescriptor;)V
}
public final class space/kscience/dataforge/meta/SealedMeta$$serializer : kotlinx/serialization/internal/GeneratedSerializer {
@ -490,9 +505,13 @@ public final class space/kscience/dataforge/meta/SealedMeta$Companion {
public final class space/kscience/dataforge/meta/SealedMetaKt {
public static final fun Meta (Ljava/lang/Number;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun Meta (Ljava/lang/String;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun Meta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun Meta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/Meta;
public static final fun Meta (Lspace/kscience/dataforge/meta/Value;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun Meta (Z)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun MutableMeta ()Lspace/kscience/dataforge/meta/MutableMeta;
public static final fun MutableMeta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/MutableMeta;
public static synthetic fun MutableMeta$default (Lkotlin/jvm/functions/Function1;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/MutableMeta;
public static final fun SealedMeta (Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/SealedMeta;
public static final fun seal (Lspace/kscience/dataforge/meta/Meta;)Lspace/kscience/dataforge/meta/SealedMeta;
}
@ -541,9 +560,9 @@ public final class space/kscience/dataforge/meta/True : space/kscience/dataforge
}
public abstract interface class space/kscience/dataforge/meta/TypedMeta : space/kscience/dataforge/meta/Meta {
public synthetic fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun get (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public abstract fun getItems ()Ljava/util/Map;
public synthetic fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/Meta;
public fun getMeta (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/meta/TypedMeta;
public fun toMeta ()Lspace/kscience/dataforge/meta/Meta;
}
@ -561,6 +580,8 @@ public abstract interface class space/kscience/dataforge/meta/Value {
public final class space/kscience/dataforge/meta/Value$Companion {
public static final field TYPE Ljava/lang/String;
public final fun of (Ljava/lang/Object;)Lspace/kscience/dataforge/meta/Value;
public final fun parse (Ljava/lang/String;)Lspace/kscience/dataforge/meta/Value;
public final fun serializer ()Lkotlinx/serialization/KSerializer;
}
public final class space/kscience/dataforge/meta/ValueExtensionsKt {
@ -635,21 +656,11 @@ public final class space/kscience/dataforge/meta/ValueType : java/lang/Enum {
public static final field NULL Lspace/kscience/dataforge/meta/ValueType;
public static final field NUMBER Lspace/kscience/dataforge/meta/ValueType;
public static final field STRING Lspace/kscience/dataforge/meta/ValueType;
public static fun getEntries ()Lkotlin/enums/EnumEntries;
public static fun valueOf (Ljava/lang/String;)Lspace/kscience/dataforge/meta/ValueType;
public static fun values ()[Lspace/kscience/dataforge/meta/ValueType;
}
public final class space/kscience/dataforge/meta/ValueType$$serializer : kotlinx/serialization/internal/GeneratedSerializer {
public static final field INSTANCE Lspace/kscience/dataforge/meta/ValueType$$serializer;
public fun childSerializers ()[Lkotlinx/serialization/KSerializer;
public synthetic fun deserialize (Lkotlinx/serialization/encoding/Decoder;)Ljava/lang/Object;
public fun deserialize (Lkotlinx/serialization/encoding/Decoder;)Lspace/kscience/dataforge/meta/ValueType;
public fun getDescriptor ()Lkotlinx/serialization/descriptors/SerialDescriptor;
public synthetic fun serialize (Lkotlinx/serialization/encoding/Encoder;Ljava/lang/Object;)V
public fun serialize (Lkotlinx/serialization/encoding/Encoder;Lspace/kscience/dataforge/meta/ValueType;)V
public fun typeParametersSerializers ()[Lkotlinx/serialization/KSerializer;
}
public final class space/kscience/dataforge/meta/ValueType$Companion {
public final fun serializer ()Lkotlinx/serialization/KSerializer;
}
@ -661,34 +672,30 @@ public abstract interface class space/kscience/dataforge/meta/descriptors/Descri
public final class space/kscience/dataforge/meta/descriptors/MetaDescriptor {
public static final field Companion Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor$Companion;
public fun <init> ()V
public synthetic fun <init> (ILjava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRequirement;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;ZLspace/kscience/dataforge/meta/Meta;Lkotlinx/serialization/internal/SerializationConstructorMarker;)V
public fun <init> (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRequirement;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;ZLspace/kscience/dataforge/meta/Meta;)V
public synthetic fun <init> (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRequirement;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;ZLspace/kscience/dataforge/meta/Meta;ILkotlin/jvm/internal/DefaultConstructorMarker;)V
public fun <init> (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRestriction;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/Meta;)V
public synthetic fun <init> (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRestriction;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/Meta;ILkotlin/jvm/internal/DefaultConstructorMarker;)V
public final fun component1 ()Ljava/lang/String;
public final fun component2 ()Ljava/util/Map;
public final fun component3 ()Z
public final fun component4 ()Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public final fun component4 ()Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public final fun component5 ()Ljava/util/List;
public final fun component6 ()Ljava/lang/String;
public final fun component7 ()Lspace/kscience/dataforge/meta/Value;
public final fun component8 ()Z
public final fun component9 ()Lspace/kscience/dataforge/meta/Meta;
public final fun copy (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRequirement;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;ZLspace/kscience/dataforge/meta/Meta;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public static synthetic fun copy$default (Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRequirement;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;ZLspace/kscience/dataforge/meta/Meta;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public final fun component8 ()Lspace/kscience/dataforge/meta/Meta;
public final fun copy (Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRestriction;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/Meta;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public static synthetic fun copy$default (Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;Ljava/lang/String;Ljava/util/Map;ZLspace/kscience/dataforge/meta/descriptors/ValueRestriction;Ljava/util/List;Ljava/lang/String;Lspace/kscience/dataforge/meta/Value;Lspace/kscience/dataforge/meta/Meta;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public fun equals (Ljava/lang/Object;)Z
public final fun getAttributes ()Lspace/kscience/dataforge/meta/Meta;
public final fun getChildren ()Ljava/util/Map;
public final fun getDefaultNode ()Lspace/kscience/dataforge/meta/Meta;
public final fun getDefaultValue ()Lspace/kscience/dataforge/meta/Value;
public final fun getDescription ()Ljava/lang/String;
public final fun getIndexKey ()Ljava/lang/String;
public final fun getInfo ()Ljava/lang/String;
public final fun getMultiple ()Z
public final fun getReadOnly ()Z
public final fun getValueRequirement ()Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public final fun getValueRestriction ()Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public final fun getValueTypes ()Ljava/util/List;
public fun hashCode ()I
public fun toString ()Ljava/lang/String;
public static final synthetic fun write$Self (Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;Lkotlinx/serialization/encoding/CompositeEncoder;Lkotlinx/serialization/descriptors/SerialDescriptor;)V
}
public final class space/kscience/dataforge/meta/descriptors/MetaDescriptor$$serializer : kotlinx/serialization/internal/GeneratedSerializer {
@ -703,6 +710,7 @@ public final class space/kscience/dataforge/meta/descriptors/MetaDescriptor$$ser
}
public final class space/kscience/dataforge/meta/descriptors/MetaDescriptor$Companion {
public final fun getEMPTY ()Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public final fun serializer ()Lkotlinx/serialization/KSerializer;
}
@ -719,9 +727,8 @@ public final class space/kscience/dataforge/meta/descriptors/MetaDescriptorBuild
public final fun getIndexKey ()Ljava/lang/String;
public final fun getInfo ()Ljava/lang/String;
public final fun getMultiple ()Z
public final fun getReadOnly ()Z
public final fun getType ()Ljava/util/List;
public final fun getValueRequirement ()Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public final fun getValueRestriction ()Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public final fun getValueTypes ()Ljava/util/List;
public final fun item (Lspace/kscience/dataforge/names/Name;Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptorBuilder;
public static synthetic fun item$default (Lspace/kscience/dataforge/meta/descriptors/MetaDescriptorBuilder;Lspace/kscience/dataforge/names/Name;Lkotlin/jvm/functions/Function1;ILjava/lang/Object;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptorBuilder;
public final fun node (Lspace/kscience/dataforge/names/Name;Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;Lkotlin/jvm/functions/Function1;)Lspace/kscience/dataforge/meta/descriptors/MetaDescriptorBuilder;
@ -733,10 +740,9 @@ public final class space/kscience/dataforge/meta/descriptors/MetaDescriptorBuild
public final fun setIndexKey (Ljava/lang/String;)V
public final fun setInfo (Ljava/lang/String;)V
public final fun setMultiple (Z)V
public final fun setReadOnly (Z)V
public final fun setType (Ljava/util/List;)V
public final fun setValueRequirement (Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;)V
public final fun type (Lspace/kscience/dataforge/meta/ValueType;[Lspace/kscience/dataforge/meta/ValueType;)V
public final fun setValueRestriction (Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;)V
public final fun setValueTypes (Ljava/util/List;)V
public final fun valueType (Lspace/kscience/dataforge/meta/ValueType;[Lspace/kscience/dataforge/meta/ValueType;)V
}
public final class space/kscience/dataforge/meta/descriptors/MetaDescriptorBuilderKt {
@ -764,12 +770,13 @@ public final class space/kscience/dataforge/meta/descriptors/MetaDescriptorKt {
public static final fun validate (Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;Lspace/kscience/dataforge/meta/Value;)Z
}
public final class space/kscience/dataforge/meta/descriptors/ValueRequirement : java/lang/Enum {
public static final field ABSENT Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public static final field NONE Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public static final field REQUIRED Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public static fun valueOf (Ljava/lang/String;)Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public static fun values ()[Lspace/kscience/dataforge/meta/descriptors/ValueRequirement;
public final class space/kscience/dataforge/meta/descriptors/ValueRestriction : java/lang/Enum {
public static final field ABSENT Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public static final field NONE Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public static final field REQUIRED Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public static fun getEntries ()Lkotlin/enums/EnumEntries;
public static fun valueOf (Ljava/lang/String;)Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
public static fun values ()[Lspace/kscience/dataforge/meta/descriptors/ValueRestriction;
}
public final class space/kscience/dataforge/meta/transformations/KeepTransformationRule : space/kscience/dataforge/meta/transformations/TransformationRule {
@ -788,7 +795,10 @@ public final class space/kscience/dataforge/meta/transformations/KeepTransformat
public abstract interface class space/kscience/dataforge/meta/transformations/MetaConverter {
public static final field Companion Lspace/kscience/dataforge/meta/transformations/MetaConverter$Companion;
public abstract fun metaToObject (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Object;
public fun getDescriptor ()Lspace/kscience/dataforge/meta/descriptors/MetaDescriptor;
public abstract fun getType ()Lkotlin/reflect/KType;
public fun metaToObject (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Object;
public abstract fun metaToObjectOrNull (Lspace/kscience/dataforge/meta/Meta;)Ljava/lang/Object;
public abstract fun objectToMeta (Ljava/lang/Object;)Lspace/kscience/dataforge/meta/Meta;
}
@ -893,6 +903,10 @@ public abstract interface annotation class space/kscience/dataforge/misc/DFExper
public abstract interface annotation class space/kscience/dataforge/misc/DFInternal : java/lang/annotation/Annotation {
}
public abstract interface annotation class space/kscience/dataforge/misc/DfId : java/lang/annotation/Annotation {
public abstract fun id ()Ljava/lang/String;
}
public abstract interface class space/kscience/dataforge/misc/Named {
public static final field Companion Lspace/kscience/dataforge/misc/Named$Companion;
public abstract fun getName ()Lspace/kscience/dataforge/names/Name;
@ -906,10 +920,6 @@ public final class space/kscience/dataforge/misc/NamedKt {
public static final fun isAnonymous (Lspace/kscience/dataforge/misc/Named;)Z
}
public abstract interface annotation class space/kscience/dataforge/misc/Type : java/lang/annotation/Annotation {
public abstract fun id ()Ljava/lang/String;
}
public final class space/kscience/dataforge/names/Name {
public static final field Companion Lspace/kscience/dataforge/names/Name$Companion;
public static final field NAME_SEPARATOR Ljava/lang/String;
@ -944,6 +954,7 @@ public final class space/kscience/dataforge/names/NameKt {
public static synthetic fun get$default (Ljava/util/Map;Ljava/lang/String;Ljava/lang/String;ILjava/lang/Object;)Ljava/lang/Object;
public static final fun getLength (Lspace/kscience/dataforge/names/Name;)I
public static final fun isEmpty (Lspace/kscience/dataforge/names/Name;)Z
public static final fun last (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/names/NameToken;
public static final fun lastOrNull (Lspace/kscience/dataforge/names/Name;)Lspace/kscience/dataforge/names/NameToken;
public static final fun parseAsName (Ljava/lang/String;Z)Lspace/kscience/dataforge/names/Name;
public static synthetic fun parseAsName$default (Ljava/lang/String;ZILjava/lang/Object;)Lspace/kscience/dataforge/names/Name;

2
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/JsonMeta.kt
View File

@ -81,7 +81,7 @@ public fun JsonPrimitive.toValue(descriptor: MetaDescriptor?): Value = when (thi
content.asValue()
} else {
//consider using LazyParse
content.parseValue()
Value.parse(content)
}
}
}

4
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/Laminate.kt
View File

@ -17,8 +17,8 @@ public class Laminate internal constructor(public val layers: List<Meta>) : Type
}
}
override fun getMeta(name: Name): Laminate? {
val childLayers = layers.mapNotNull { it.getMeta(name) }
override fun get(name: Name): Laminate? {
val childLayers = layers.mapNotNull { it.get(name) }
return if (childLayers.isEmpty()) null else Laminate(childLayers)
}

45
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/Meta.kt
View File

@ -2,7 +2,7 @@ package space.kscience.dataforge.meta
import kotlinx.serialization.Serializable
import kotlinx.serialization.json.Json
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.misc.unsafeCast
import space.kscience.dataforge.names.*
import kotlin.jvm.JvmName
@ -21,9 +21,9 @@ public interface MetaRepr {
* A container for meta nodes
*/
public fun interface MetaProvider : ValueProvider {
public fun getMeta(name: Name): Meta?
public operator fun get(name: Name): Meta?
override fun getValue(name: Name): Value? = getMeta(name)?.value
override fun getValue(name: Name): Value? = get(name)?.value
}
/**
@ -31,13 +31,13 @@ public fun interface MetaProvider : ValueProvider {
* TODO add documentation
* Same name siblings are supported via elements with the same [Name] but different indices.
*/
@Type(Meta.TYPE)
@DfId(Meta.TYPE)
@Serializable(MetaSerializer::class)
public interface Meta : MetaRepr, MetaProvider {
public val value: Value?
public val items: Map<NameToken, Meta>
override fun getMeta(name: Name): Meta? {
override fun get(name: Name): Meta? {
tailrec fun Meta.find(name: Name): Meta? = if (name.isEmpty()) {
this
} else {
@ -50,7 +50,9 @@ public interface Meta : MetaRepr, MetaProvider {
override fun toMeta(): Meta = this
override fun toString(): String
override fun equals(other: Any?): Boolean
override fun hashCode(): Int
public companion object {
@ -106,21 +108,13 @@ public operator fun Meta.get(token: NameToken): Meta? = items[token]
*
* If [name] is empty return current [Meta]
*/
public operator fun Meta?.get(name: Name): Meta? = this?.getMeta(name)
@Deprecated("Use nullable receiver", level = DeprecationLevel.HIDDEN)
@JvmName("getNonNullable")
public operator fun Meta.get(name: Name): Meta? = getMeta(name)
public operator fun Meta?.get(name: Name): Meta? = this?.get(name)
/**
* Parse [Name] from [key] using full name notation and pass it to [Meta.get]
*/
public operator fun Meta?.get(key: String): Meta? = this?.get(key.parseAsName(true))
@Deprecated("Use nullable receiver", level = DeprecationLevel.HIDDEN)
@JvmName("getNonNullable")
public operator fun Meta.get(key: String): Meta? = get(key.parseAsName(true))
/**
* Get all items matching given name. The index of the last element, if present is used as a [Regex],
* against which indexes of elements are matched.
@ -157,7 +151,7 @@ public interface TypedMeta<out M : TypedMeta<M>> : Meta {
override val items: Map<NameToken, M>
override fun getMeta(name: Name): M? {
override fun get(name: Name): M? {
tailrec fun M.find(name: Name): M? = if (name.isEmpty()) {
this
} else {
@ -180,28 +174,17 @@ public inline val <M : TypedMeta<M>> TypedMeta<M>.self: M get() = unsafeCast()
public operator fun <M : TypedMeta<M>> TypedMeta<M>?.get(token: NameToken): M? = this?.items?.get(token)
/**
* Perform recursive item search using given [name]. Each [NameToken] is treated as a name in [TypedMeta.items] of a parent node.
* Retrieves a meta node with the given name from the nullable [TypedMeta] object.
*
* If [name] is empty return current [Meta]
* @param name The name of the meta node to retrieve.
* @return The meta node with the given name, or null if it doesn't exist.
*/
public tailrec operator fun <M : TypedMeta<M>> TypedMeta<M>?.get(name: Name): M? = when {
this == null -> null
name.isEmpty() -> self
else -> get(name.firstOrNull()!!)?.get(name.cutFirst())
}
@Deprecated("Use nullable receiver", level = DeprecationLevel.HIDDEN)
@JvmName("getNonNullable")
public operator fun <M : TypedMeta<M>> TypedMeta<M>.get(name: Name): M? = get(name)
public operator fun <M : TypedMeta<M>> M?.get(name: Name): M? = this?.get(name)
/**
* Parse [Name] from [key] using full name notation and pass it to [TypedMeta.get]
*/
public operator fun <M : TypedMeta<M>> TypedMeta<M>?.get(key: String): M? = this[key.parseAsName(true)]
@Deprecated("Use nullable receiver", level = DeprecationLevel.HIDDEN)
@JvmName("getNonNullable")
public operator fun <M : TypedMeta<M>> TypedMeta<M>.get(key: String): M? = get(key)
public operator fun <M : TypedMeta<M>> M?.get(key: String): M? = this?.get(key.parseAsName(true))
/**

8
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/MetaDelegate.kt
View File

@ -8,28 +8,28 @@ import kotlin.properties.ReadOnlyProperty
/* Meta delegates */
public fun MetaProvider.node(key: Name? = null): ReadOnlyProperty<Any?, Meta?> = ReadOnlyProperty { _, property ->
getMeta(key ?: property.name.asName())
get(key ?: property.name.asName())
}
public fun <T> MetaProvider.node(
key: Name? = null,
converter: MetaConverter<T>
): ReadOnlyProperty<Any?, T?> = ReadOnlyProperty { _, property ->
getMeta(key ?: property.name.asName())?.let { converter.metaToObject(it) }
get(key ?: property.name.asName())?.let { converter.metaToObject(it) }
}
/**
* A property delegate that uses custom key
*/
public fun MetaProvider.value(key: Name? = null): ReadOnlyProperty<Any?, Value?> = ReadOnlyProperty { _, property ->
getMeta(key ?: property.name.asName())?.value
get(key ?: property.name.asName())?.value
}
public fun <R> MetaProvider.value(
key: Name? = null,
reader: (Value?) -> R
): ReadOnlyProperty<Any?, R> = ReadOnlyProperty { _, property ->
reader(getMeta(key ?: property.name.asName())?.value)
reader(get(key ?: property.name.asName())?.value)
}
//TODO add caching for sealed nodes

59
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/MutableMeta.kt
View File

@ -11,14 +11,14 @@ import kotlin.js.JsName
* Mark a meta builder
*/
@DslMarker
public annotation class MetaBuilder
public annotation class MetaBuilderMarker
/**
* A generic interface that gives access to getting and setting meta notes and values
*/
public interface MutableMetaProvider : MetaProvider, MutableValueProvider {
override fun getMeta(name: Name): MutableMeta?
public fun setMeta(name: Name, node: Meta?)
override fun get(name: Name): MutableMeta?
public operator fun set(name: Name, node: Meta?)
override fun setValue(name: Name, value: Value?)
}
@ -27,7 +27,7 @@ public interface MutableMetaProvider : MetaProvider, MutableValueProvider {
* TODO documentation
*/
@Serializable(MutableMetaSerializer::class)
@MetaBuilder
@MetaBuilderMarker
public interface MutableMeta : Meta, MutableMetaProvider {
override val items: Map<NameToken, MutableMeta>
@ -37,7 +37,7 @@ public interface MutableMeta : Meta, MutableMetaProvider {
*/
override var value: Value?
override fun getMeta(name: Name): MutableMeta? {
override fun get(name: Name): MutableMeta? {
tailrec fun MutableMeta.find(name: Name): MutableMeta? = if (name.isEmpty()) {
this
} else {
@ -83,19 +83,19 @@ public interface MutableMeta : Meta, MutableMetaProvider {
}
public infix fun Name.put(meta: Meta) {
setMeta(this, meta)
set(this, meta)
}
public infix fun Name.put(repr: MetaRepr) {
setMeta(this, repr.toMeta())
set(this, repr.toMeta())
}
public infix fun Name.put(mutableMeta: MutableMeta.() -> Unit) {
setMeta(this, Meta(mutableMeta))
public infix fun Name.put(builder: MutableMeta.() -> Unit) {
getOrCreate(this).apply(builder)
}
public infix fun String.put(meta: Meta) {
setMeta(Name.parse(this), meta)
set(Name.parse(this), meta)
}
public infix fun String.put(value: Value?) {
@ -123,7 +123,7 @@ public interface MutableMeta : Meta, MutableMetaProvider {
}
public infix fun String.put(repr: MetaRepr) {
setMeta(Name.parse(this), repr.toMeta())
set(Name.parse(this), repr.toMeta())
}
public infix fun String.putIndexed(iterable: Iterable<Meta>) {
@ -131,15 +131,10 @@ public interface MutableMeta : Meta, MutableMetaProvider {
}
public infix fun String.put(builder: MutableMeta.() -> Unit) {
setMeta(Name.parse(this), MutableMeta(builder))
getOrCreate(parseAsName()).apply(builder)
}
}
/**
* Set or replace node at given [name]
*/
public operator fun MutableMetaProvider.set(name: Name, meta: Meta): Unit = setMeta(name, meta)
/**
* Set or replace value at given [name]
*/
@ -154,24 +149,24 @@ public interface MutableTypedMeta<M : MutableTypedMeta<M>> : TypedMeta<M>, Mutab
*/
@DFExperimental
public fun attach(name: Name, node: M)
override fun getMeta(name: Name): M?
override fun get(name: Name): M?
override fun getOrCreate(name: Name): M
}
public fun <M : MutableTypedMeta<M>> M.getOrCreate(key: String): M = getOrCreate(Name.parse(key))
public fun MutableMetaProvider.remove(name: Name) {
setMeta(name, null)
set(name, null)
}
public fun MutableMetaProvider.remove(key: String) {
setMeta(Name.parse(key), null)
set(Name.parse(key), null)
}
// node setters
public operator fun MutableMetaProvider.set(Key: NameToken, value: Meta): Unit = setMeta(Key.asName(), value)
public operator fun MutableMetaProvider.set(key: String, value: Meta): Unit = setMeta(Name.parse(key), value)
public operator fun MutableMetaProvider.set(Key: NameToken, value: Meta): Unit = set(Key.asName(), value)
public operator fun MutableMetaProvider.set(key: String, value: Meta): Unit = set(Name.parse(key), value)
//public fun MutableMeta.set(key: String, index: String, value: Value?): Unit =
@ -319,7 +314,7 @@ private class MutableMetaImpl(
)
@ThreadSafe
override fun setMeta(name: Name, node: Meta?) {
override fun set(name: Name, node: Meta?) {
val oldItem: ObservableMutableMeta? = get(name)
if (oldItem != node) {
when (name.length) {
@ -346,7 +341,7 @@ private class MutableMetaImpl(
newNode.adoptBy(this, token)
children[token] = newNode
}
items[token]?.setMeta(name.cutFirst(), node)
items[token]?.set(name.cutFirst(), node)
}
}
invalidate(name)
@ -381,16 +376,14 @@ public fun Meta.toMutableMeta(): ObservableMutableMeta = MutableMetaImpl(value,
public fun Meta.asMutableMeta(): MutableMeta = (this as? MutableMeta) ?: toMutableMeta()
@Suppress("FunctionName")
@JsName("newMutableMeta")
public fun MutableMeta(): ObservableMutableMeta = MutableMetaImpl(null)
@JsName("newObservableMutableMeta")
public fun ObservableMutableMeta(): ObservableMutableMeta = MutableMetaImpl(null)
/**
* Build a [MutableMeta] using given transformation
*/
@Suppress("FunctionName")
public inline fun MutableMeta(builder: MutableMeta.() -> Unit = {}): ObservableMutableMeta =
MutableMeta().apply(builder)
public inline fun ObservableMutableMeta(builder: MutableMeta.() -> Unit = {}): ObservableMutableMeta =
ObservableMutableMeta().apply(builder)
/**
@ -407,7 +400,7 @@ private class MutableMetaWithDefault(
override val items: Map<NameToken, MutableMeta>
get() {
val sourceKeys: Collection<NameToken> = source[rootName]?.items?.keys ?: emptyList()
val defaultKeys: Collection<NameToken> = default.getMeta(rootName)?.items?.keys ?: emptyList()
val defaultKeys: Collection<NameToken> = default[rootName]?.items?.keys ?: emptyList()
//merging keys for primary and default node
return (sourceKeys + defaultKeys).associateWith {
MutableMetaWithDefault(source, default, rootName + it)
@ -415,12 +408,12 @@ private class MutableMetaWithDefault(
}
override var value: Value?
get() = source[rootName]?.value ?: default.getMeta(rootName)?.value
get() = source[rootName]?.value ?: default.get(rootName)?.value
set(value) {
source[rootName] = value
}
override fun getMeta(name: Name): MutableMeta = MutableMetaWithDefault(source, default, rootName + name)
override fun get(name: Name): MutableMeta = MutableMetaWithDefault(source, default, rootName + name)
override fun toString(): String = Meta.toString(this)
override fun equals(other: Any?): Boolean = Meta.equals(this, other as? Meta)

12
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/MutableMetaDelegate.kt
View File

@ -11,31 +11,31 @@ import kotlin.reflect.KProperty
public fun MutableMetaProvider.node(key: Name? = null): ReadWriteProperty<Any?, Meta?> =
object : ReadWriteProperty<Any?, Meta?> {
override fun getValue(thisRef: Any?, property: KProperty<*>): Meta? {
return getMeta(key ?: property.name.asName())
return get(key ?: property.name.asName())
}
override fun setValue(thisRef: Any?, property: KProperty<*>, value: Meta?) {
val name = key ?: property.name.asName()
setMeta(name, value)
set(name, value)
}
}
public fun <T> MutableMetaProvider.node(key: Name? = null, converter: MetaConverter<T>): ReadWriteProperty<Any?, T?> =
object : ReadWriteProperty<Any?, T?> {
override fun getValue(thisRef: Any?, property: KProperty<*>): T? {
return getMeta(key ?: property.name.asName())?.let { converter.metaToObject(it) }
return get(key ?: property.name.asName())?.let { converter.metaToObject(it) }
}
override fun setValue(thisRef: Any?, property: KProperty<*>, value: T?) {
val name = key ?: property.name.asName()
setMeta(name, value?.let { converter.objectToMeta(it) })
set(name, value?.let { converter.objectToMeta(it) })
}
}
public fun MutableMetaProvider.value(key: Name? = null): ReadWriteProperty<Any?, Value?> =
object : ReadWriteProperty<Any?, Value?> {
override fun getValue(thisRef: Any?, property: KProperty<*>): Value? =
getMeta(key ?: property.name.asName())?.value
get(key ?: property.name.asName())?.value
override fun setValue(thisRef: Any?, property: KProperty<*>, value: Value?) {
setValue(key ?: property.name.asName(), value)
@ -48,7 +48,7 @@ public fun <T> MutableMetaProvider.value(
reader: (Value?) -> T
): ReadWriteProperty<Any?, T> = object : ReadWriteProperty<Any?, T> {
override fun getValue(thisRef: Any?, property: KProperty<*>): T =
reader(getMeta(key ?: property.name.asName())?.value)
reader(get(key ?: property.name.asName())?.value)
override fun setValue(thisRef: Any?, property: KProperty<*>, value: T) {
setValue(key ?: property.name.asName(), writer(value))

2
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/ObservableMeta.kt
View File

@ -36,7 +36,7 @@ public interface ObservableMeta : Meta {
public interface ObservableMutableMeta : ObservableMeta, MutableMeta, MutableTypedMeta<ObservableMutableMeta> {
override fun getOrCreate(name: Name): ObservableMutableMeta
override fun getMeta(name: Name): ObservableMutableMeta? {
override fun get(name: Name): ObservableMutableMeta? {
tailrec fun ObservableMutableMeta.find(name: Name): ObservableMutableMeta? = if (name.isEmpty()) {
this
} else {

12
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/ObservableMetaWrapper.kt
View File

@ -17,8 +17,8 @@ private class ObservableMetaWrapper(
ObservableMetaWrapper(root, absoluteName + it, listeners)
}
override fun getMeta(name: Name): ObservableMutableMeta? =
root.getMeta(name)?.let { ObservableMetaWrapper(root, this.absoluteName + name, listeners) }
override fun get(name: Name): ObservableMutableMeta? =
root.get(name)?.let { ObservableMetaWrapper(root, this.absoluteName + name, listeners) }
@ThreadSafe
override fun onChange(owner: Any?, callback: Meta.(name: Name) -> Unit) {
@ -49,9 +49,11 @@ private class ObservableMetaWrapper(
override fun getOrCreate(name: Name): ObservableMutableMeta =
ObservableMetaWrapper(root, this.absoluteName + name, listeners)
override fun setMeta(name: Name, node: Meta?) {
override fun set(name: Name, node: Meta?) {
val oldMeta = get(name)
root.setMeta(absoluteName + name, node)
//don't forget to remove listener
oldMeta?.removeListener(this)
root.set(absoluteName + name, node)
if (oldMeta != node) {
invalidate(name)
}
@ -67,7 +69,7 @@ private class ObservableMetaWrapper(
override fun attach(name: Name, node: ObservableMutableMeta) {
set(name, node)
node.onChange(this) { changeName ->
setMeta(name + changeName, this[changeName])
set(name + changeName, this[changeName])
}
}
}

14
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/Scheme.kt
View File

@ -47,11 +47,11 @@ public open class Scheme : Described, MetaRepr, MutableMetaProvider, Configurabl
return descriptor?.validate(meta) ?: true
}
override fun getMeta(name: Name): MutableMeta? = meta.getMeta(name)
override fun get(name: Name): MutableMeta? = meta.get(name)
override fun setMeta(name: Name, node: Meta?) {
override fun set(name: Name, node: Meta?) {
if (validate(name, meta)) {
meta.setMeta(name, node)
meta.set(name, node)
} else {
error("Validation failed for node $node at $name")
}
@ -110,8 +110,8 @@ public open class Scheme : Described, MetaRepr, MutableMetaProvider, Configurabl
override fun equals(other: Any?): Boolean = Meta.equals(this, other as? Meta)
override fun hashCode(): Int = Meta.hashCode(this)
override fun setMeta(name: Name, node: Meta?) {
targetMeta.setMeta(name, node)
override fun set(name: Name, node: Meta?) {
targetMeta.set(name, node)
invalidate(name)
}
@ -120,9 +120,9 @@ public open class Scheme : Described, MetaRepr, MutableMetaProvider, Configurabl
@DFExperimental
override fun attach(name: Name, node: ObservableMutableMeta) {
//TODO implement zero-copy attachment
setMeta(name, node)
set(name, node)
node.onChange(this) { changeName ->
setMeta(name + changeName, this[changeName])
set(name + changeName, this[changeName])
}
}

87
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/SealedMeta.kt
View File

@ -1,16 +1,17 @@
package space.kscience.dataforge.meta
import kotlinx.serialization.Serializable
import space.kscience.dataforge.names.NameToken
import space.kscience.dataforge.names.*
import kotlin.js.JsName
/**
* The meta implementation which is guaranteed to be immutable.
*
*/
@Serializable
public class SealedMeta internal constructor(
public class SealedMeta(
override val value: Value?,
override val items: Map<NameToken, SealedMeta>
override val items: Map<NameToken, SealedMeta>,
) : TypedMeta<SealedMeta> {
override fun toString(): String = Meta.toString(this)
override fun equals(other: Any?): Boolean = Meta.equals(this, other as? Meta)
@ -26,7 +27,7 @@ public class SealedMeta internal constructor(
}
/**
* Generate sealed node from [this]. If it is already sealed return it as is.
* Generate sealed node from [this]. If it is already sealed, return it as is.
*/
public fun Meta.seal(): SealedMeta = this as? SealedMeta ?: SealedMeta(
value,
@ -47,7 +48,79 @@ public fun Meta(value: String): SealedMeta = Meta(value.asValue())
@Suppress("FunctionName")
public fun Meta(value: Boolean): SealedMeta = Meta(value.asValue())
@Suppress("FunctionName")
public inline fun Meta(builder: MutableMeta.() -> Unit): SealedMeta =
MutableMeta(builder).seal()
/**
* A lightweight mutable meta without an observability
*/
@PublishedApi
internal class MetaBuilder(
override var value: Value? = null,
override val items: MutableMap<NameToken, MetaBuilder> = hashMapOf(),
) : MutableMeta {
override fun getOrCreate(name: Name): MetaBuilder {
val existing = get(name) as? MetaBuilder
return if (existing == null) {
val newItem = MetaBuilder()
set(name, newItem)
newItem
} else {
existing
}
}
private fun wrap(meta: Meta): MetaBuilder = meta as? MetaBuilder ?: MetaBuilder(
meta.value,
meta.items.mapValuesTo(hashMapOf()) { wrap(it.value) }
)
override fun set(name: Name, node: Meta?) {
when (name.length) {
0 -> error("Can't set a meta with empty name")
1 -> {
val token = name.first()
//remove child and invalidate if argument is null
if (node == null) {
items.remove(token)
} else {
items[token] = wrap(node)
}
}
else -> {
getOrCreate(name.first().asName()).set(name.cutFirst(), node)
}
}
}
override fun toString(): String = Meta.toString(this)
override fun equals(other: Any?): Boolean = Meta.equals(this, other as? Meta)
override fun hashCode(): Int = Meta.hashCode(this)
}
/**
* Create a read-only meta.
*/
public inline fun Meta(builder: MutableMeta.() -> Unit): Meta =
MetaBuilder().apply(builder).seal()
/**
* Create an immutable meta.
*/
public inline fun SealedMeta(builder: MutableMeta.() -> Unit): SealedMeta =
MetaBuilder().apply(builder).seal()
/**
* Create an empty meta mutable meta.
*/
@JsName("newMutableMeta")
public fun MutableMeta(): MutableMeta = MetaBuilder()
/**
* Create a mutable meta with given builder.
*/
public inline fun MutableMeta(builder: MutableMeta.() -> Unit = {}): MutableMeta =
MutableMeta().apply(builder)

71
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/Value.kt
View File

@ -64,6 +64,7 @@ public interface Value {
ListValue(list)
}
}
is DoubleArray -> value.asValue()
is IntArray -> value.asValue()
is FloatArray -> value.asValue()
@ -76,6 +77,41 @@ public interface Value {
else -> throw IllegalArgumentException("Unrecognized type of the object (${value::class}) converted to Value")
}
}
/**
* Parse value from string. Double-quoted strings are parsed literally. true/false are parsed as booleans
*/
public fun parse(string: String): Value {
//Trying to get integer
if (string.isEmpty() || string == Null.string) {
return Null
}
//string constants
if (string.startsWith("\"") && string.endsWith("\"")) {
return StringValue(string.substring(1, string.length - 2))
}
string.toIntOrNull()?.let {
return NumberValue(it)
}
string.toDoubleOrNull()?.let {
return NumberValue(it)
}
if ("true" == string) {
return True
}
if ("false" == string) {
return False
}
//Give up and return a StringValue
return StringValue(string)
}
}
}
@ -140,7 +176,7 @@ public class NumberValue(public val number: Number) : Value {
val otherNumber = other.numberOrNull ?: return false
if(number == otherNumber) return true
if (number == otherNumber) return true
//Do not change the order of comparison. On JS number is the instance of all types
return when (numberOrNull) {
@ -228,34 +264,5 @@ public fun <E : Enum<E>> E.asValue(): Value = EnumValue(this)
/**
* Create Value from String using the closest match conversion
*/
public fun String.parseValue(): Value {
//Trying to get integer
if (isEmpty() || this == Null.string) {
return Null
}
//string constants
if (startsWith("\"") && endsWith("\"")) {
return StringValue(substring(1, length - 2))
}
toIntOrNull()?.let {
return NumberValue(it)
}
toDoubleOrNull()?.let {
return NumberValue(it)
}
if ("true" == this) {
return True
}
if ("false" == this) {
return False
}
//Give up and return a StringValue
return StringValue(this)
}
@Deprecated("Use Value.parse(this) instead", ReplaceWith("Value.parse(this)"))
public fun String.parseValue(): Value = Value.parse(this)

20
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/descriptors/MetaDescriptor.kt
View File

@ -7,7 +7,7 @@ import space.kscience.dataforge.names.*
/**
* Restrictions on value in the node
*/
public enum class ValueRequirement {
public enum class ValueRestriction {
/**
* No restrictions
*/
@ -26,26 +26,25 @@ public enum class ValueRequirement {
/**
* The descriptor for a meta
* @param info description text
* @param description description text
* @param children child descriptors for this node
* @param multiple True if same name siblings with this name are allowed
* @param valueRequirement The requirements for node content
* @param valueRestriction The requirements for node content
* @param valueTypes list of allowed types for [Meta.value], null if all values are allowed.
* Empty list means that no value should be present in this node.
* @param indexKey An index field by which this node is identified in case of same name siblings construct
* @param defaultValue the default [Meta.value] for the node
* @param attributes additional attributes of this descriptor. For example validation and widget parameters
* @param attributes additional attributes of this descriptor. For example, validation and widget parameters
*/
@Serializable
public data class MetaDescriptor(
public val info: String? = null,
public val description: String? = null,
public val children: Map<String, MetaDescriptor> = emptyMap(),
public val multiple: Boolean = false,
public val valueRequirement: ValueRequirement = ValueRequirement.NONE,
public val valueRestriction: ValueRestriction = ValueRestriction.NONE,
public val valueTypes: List<ValueType>? = null,
public val indexKey: String = Meta.INDEX_KEY,
public val defaultValue: Value? = null,
public val readOnly: Boolean = false,
public val attributes: Meta = Meta.EMPTY,
) {
/**
@ -63,11 +62,12 @@ public data class MetaDescriptor(
}
public companion object {
public val EMPTY: MetaDescriptor = MetaDescriptor("Generic meta tree")
internal const val ALLOWED_VALUES_KEY = "allowedValues"
}
}
public val MetaDescriptor.required: Boolean get() = valueRequirement == ValueRequirement.REQUIRED || children.values.any { required }
public val MetaDescriptor.required: Boolean get() = valueRestriction == ValueRestriction.REQUIRED || children.values.any { required }
public val MetaDescriptor.allowedValues: List<Value>? get() = attributes[MetaDescriptor.ALLOWED_VALUES_KEY]?.value?.list
@ -80,9 +80,9 @@ public operator fun MetaDescriptor.get(name: Name): MetaDescriptor? = when (name
public operator fun MetaDescriptor.get(name: String): MetaDescriptor? = get(name.parseAsName(true))
public fun MetaDescriptor.validate(value: Value?): Boolean = if (value == null) {
valueRequirement != ValueRequirement.REQUIRED
valueRestriction != ValueRestriction.REQUIRED
} else {
if (valueRequirement == ValueRequirement.ABSENT) false
if (valueRestriction == ValueRestriction.ABSENT) false
else {
(valueTypes == null || value.type in valueTypes) && (allowedValues?.let { value in it } ?: true)
}

49
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/descriptors/MetaDescriptorBuilder.kt
View File

@ -8,20 +8,26 @@ import space.kscience.dataforge.names.first
import space.kscience.dataforge.names.length
import kotlin.collections.set
public class MetaDescriptorBuilder @PublishedApi internal constructor() {
public class MetaDescriptorBuilder @PublishedApi internal constructor() {
public var info: String? = null
public var children: MutableMap<String, MetaDescriptorBuilder> = linkedMapOf()
public var multiple: Boolean = false
public var valueRequirement: ValueRequirement = ValueRequirement.NONE
public var readOnly: Boolean = false
public var valueRestriction: ValueRestriction = ValueRestriction.NONE
public var type: List<ValueType>? = null
public var valueTypes: List<ValueType>? = null
public fun type(primaryType: ValueType, vararg otherTypes: ValueType) {
type = listOf(primaryType, *otherTypes)
public fun valueType(primaryType: ValueType, vararg otherTypes: ValueType) {
valueTypes = listOf(primaryType, *otherTypes)
}
/**
* A key for indexing values. Should be changed in case of the name clash.
*/
public var indexKey: String = Meta.INDEX_KEY
/**
* The default value
*/
public var default: Value? = null
public fun default(value: Any?) {
@ -42,6 +48,7 @@ public class MetaDescriptorBuilder @PublishedApi internal constructor() {
children[name.first().body] = target
target
}
else -> {
children.getOrPut(name.first().body) { MetaDescriptorBuilder() }.item(name.cutFirst(), block)
}
@ -51,16 +58,17 @@ public class MetaDescriptorBuilder @PublishedApi internal constructor() {
public fun node(
name: Name,
descriptor: MetaDescriptor,
block: MetaDescriptorBuilder.() -> Unit = {}
block: MetaDescriptorBuilder.() -> Unit = {},
): MetaDescriptorBuilder = when (name.length) {
0 -> error("Can't set descriptor to root")
1 -> {
val item = descriptor.toBuilder().apply {
valueRequirement = ValueRequirement.ABSENT
valueRestriction = ValueRestriction.ABSENT
}.apply(block)
children[name.first().body] = item
item
}
else -> children.getOrPut(name.first().body) {
MetaDescriptorBuilder()
}.node(name.cutFirst(), descriptor, block)
@ -79,14 +87,13 @@ public class MetaDescriptorBuilder @PublishedApi internal constructor() {
@PublishedApi
internal fun build(): MetaDescriptor = MetaDescriptor(
info = info,
description = info,
children = children.mapValues { it.value.build() },
multiple = multiple,
valueRequirement = valueRequirement,
valueTypes = type,
valueRestriction = valueRestriction,
valueTypes = valueTypes,
indexKey = indexKey,
defaultValue = default,
readOnly = readOnly,
attributes = attributes
)
}
@ -104,9 +111,9 @@ public fun MetaDescriptorBuilder.value(
name: Name,
type: ValueType,
vararg additionalTypes: ValueType,
block: MetaDescriptorBuilder.() -> Unit = {}
block: MetaDescriptorBuilder.() -> Unit = {},
): MetaDescriptorBuilder = item(name) {
type(type, *additionalTypes)
valueType(type, *additionalTypes)
block()
}
@ -114,16 +121,16 @@ public fun MetaDescriptorBuilder.value(
name: String,
type: ValueType,
vararg additionalTypes: ValueType,
block: MetaDescriptorBuilder.() -> Unit = {}
block: MetaDescriptorBuilder.() -> Unit = {},
): MetaDescriptorBuilder = value(Name.parse(name), type, additionalTypes = additionalTypes, block)
/**
* Create and configure child value descriptor
*/
public fun MetaDescriptorBuilder.node(
name: Name, block: MetaDescriptorBuilder.() -> Unit
name: Name, block: MetaDescriptorBuilder.() -> Unit,
): MetaDescriptorBuilder = item(name) {
valueRequirement = ValueRequirement.ABSENT
valueRestriction = ValueRestriction.ABSENT
block()
}
@ -142,7 +149,7 @@ public fun MetaDescriptorBuilder.node(
}
public fun MetaDescriptorBuilder.required() {
valueRequirement = ValueRequirement.REQUIRED
valueRestriction = ValueRestriction.REQUIRED
}
public inline fun <reified E : Enum<E>> MetaDescriptorBuilder.enum(
@ -158,11 +165,11 @@ public inline fun <reified E : Enum<E>> MetaDescriptorBuilder.enum(
}
private fun MetaDescriptor.toBuilder(): MetaDescriptorBuilder = MetaDescriptorBuilder().apply {
info = this@toBuilder.info
info = this@toBuilder.description
children = this@toBuilder.children.mapValuesTo(LinkedHashMap()) { it.value.toBuilder() }
multiple = this@toBuilder.multiple
valueRequirement = this@toBuilder.valueRequirement
type = this@toBuilder.valueTypes
valueRestriction = this@toBuilder.valueRestriction
valueTypes = this@toBuilder.valueTypes
indexKey = this@toBuilder.indexKey
default = defaultValue
attributes = this@toBuilder.attributes.toMutableMeta()

2
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/exoticValues.kt
View File

@ -5,7 +5,7 @@ package space.kscience.dataforge.meta
* A value built from string which content and type are parsed on-demand
*/
public class LazyParsedValue(public val string: String) : Value {
private val parsedValue by lazy { string.parseValue() }
private val parsedValue by lazy { Value.parse(string) }
override val value: Any? get() = parsedValue.value
override val type: ValueType get() = parsedValue.type

104
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/transformations/MetaConverter.kt
View File

@ -1,79 +1,155 @@
package space.kscience.dataforge.meta.transformations
import space.kscience.dataforge.meta.*
import space.kscience.dataforge.meta.descriptors.MetaDescriptor
import kotlin.reflect.KType
import kotlin.reflect.typeOf
/**
* A converter of generic object to and from [Meta]
*/
public interface MetaConverter<T> {
public fun metaToObject(meta: Meta): T?
/**
* Runtime type of [T]
*/
public val type: KType
/**
* A descriptor for resulting meta
*/
public val descriptor: MetaDescriptor get() = MetaDescriptor.EMPTY
/**
* Attempt conversion of [meta] to an object or return null if conversion failed
*/
public fun metaToObjectOrNull(meta: Meta): T?
public fun metaToObject(meta: Meta): T =
metaToObjectOrNull(meta) ?: error("Meta $meta could not be interpreted by $this")
public fun objectToMeta(obj: T): Meta
public companion object {
public val meta: MetaConverter<Meta> = object : MetaConverter<Meta> {
override fun metaToObject(meta: Meta): Meta = meta
override val type: KType = typeOf<Meta>()
override fun metaToObjectOrNull(meta: Meta): Meta = meta
override fun objectToMeta(obj: Meta): Meta = obj
}
public val value: MetaConverter<Value> = object : MetaConverter<Value> {
override fun metaToObject(meta: Meta): Value? = meta.value
override val type: KType = typeOf<Value>()
override fun metaToObjectOrNull(meta: Meta): Value? = meta.value
override fun objectToMeta(obj: Value): Meta = Meta(obj)
}
public val string: MetaConverter<String> = object : MetaConverter<String> {
override fun metaToObject(meta: Meta): String? = meta.string
override val type: KType = typeOf<String>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.STRING)
}
override fun metaToObjectOrNull(meta: Meta): String? = meta.string
override fun objectToMeta(obj: String): Meta = Meta(obj.asValue())
}
public val boolean: MetaConverter<Boolean> = object : MetaConverter<Boolean> {
override fun metaToObject(meta: Meta): Boolean? = meta.boolean
override val type: KType = typeOf<Boolean>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.BOOLEAN)
}
override fun metaToObjectOrNull(meta: Meta): Boolean? = meta.boolean
override fun objectToMeta(obj: Boolean): Meta = Meta(obj.asValue())
}
public val number: MetaConverter<Number> = object : MetaConverter<Number> {
override fun metaToObject(meta: Meta): Number? = meta.number
override val type: KType = typeOf<Number>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.NUMBER)
}
override fun metaToObjectOrNull(meta: Meta): Number? = meta.number
override fun objectToMeta(obj: Number): Meta = Meta(obj.asValue())
}
public val double: MetaConverter<Double> = object : MetaConverter<Double> {
override fun metaToObject(meta: Meta): Double? = meta.double
override val type: KType = typeOf<Double>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.NUMBER)
}
override fun metaToObjectOrNull(meta: Meta): Double? = meta.double
override fun objectToMeta(obj: Double): Meta = Meta(obj.asValue())
}
public val float: MetaConverter<Float> = object : MetaConverter<Float> {
override fun metaToObject(meta: Meta): Float? = meta.float
override val type: KType = typeOf<Float>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.NUMBER)
}
override fun metaToObjectOrNull(meta: Meta): Float? = meta.float
override fun objectToMeta(obj: Float): Meta = Meta(obj.asValue())
}
public val int: MetaConverter<Int> = object : MetaConverter<Int> {
override fun metaToObject(meta: Meta): Int? = meta.int
override val type: KType = typeOf<Int>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.NUMBER)
}
override fun metaToObjectOrNull(meta: Meta): Int? = meta.int
override fun objectToMeta(obj: Int): Meta = Meta(obj.asValue())
}
public val long: MetaConverter<Long> = object : MetaConverter<Long> {
override fun metaToObject(meta: Meta): Long? = meta.long
override val type: KType = typeOf<Long>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.NUMBER)
}
override fun metaToObjectOrNull(meta: Meta): Long? = meta.long
override fun objectToMeta(obj: Long): Meta = Meta(obj.asValue())
}
public inline fun <reified E : Enum<E>> enum(): MetaConverter<E> = object : MetaConverter<E> {
override val type: KType = typeOf<E>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.STRING)
allowedValues(enumValues<E>())
}
@Suppress("USELESS_CAST")
override fun metaToObject(meta: Meta): E = meta.enum<E>() as? E ?: error("The Item is not a Enum")
override fun metaToObjectOrNull(meta: Meta): E = meta.enum<E>() as? E ?: error("The Item is not a Enum")
override fun objectToMeta(obj: E): Meta = Meta(obj.asValue())
}
public fun <T> valueList(
writer: (T) -> Value = { Value.of(it) },
reader: (Value) -> T
reader: (Value) -> T,
): MetaConverter<List<T>> =
object : MetaConverter<List<T>> {
override fun metaToObject(meta: Meta): List<T> =
meta.value?.list?.map(reader) ?: error("The item is not a value list")
override val type: KType = typeOf<List<T>>()
override val descriptor: MetaDescriptor = MetaDescriptor {
valueType(ValueType.LIST)
}
override fun metaToObjectOrNull(meta: Meta): List<T>? = meta.value?.list?.map(reader)
override fun objectToMeta(obj: List<T>): Meta = Meta(obj.map(writer).asValue())
}

8
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/meta/transformations/MetaTransformation.kt
View File

@ -42,7 +42,7 @@ public data class KeepTransformationRule(val selector: (Name) -> Boolean) :
meta.nodeSequence().map { it.first }.filter(selector)
override fun transformItem(name: Name, item: Meta?, target: MutableMeta) {
if (selector(name)) target.setMeta(name, item)
if (selector(name)) target.set(name, item)
}
}
@ -105,7 +105,7 @@ public value class MetaTransformation(private val transformations: Collection<Tr
* Generate an observable configuration that contains only elements defined by transformation rules and changes with the source
*/
@DFExperimental
public fun generate(source: ObservableMeta): ObservableMeta = MutableMeta().apply {
public fun generate(source: ObservableMeta): ObservableMeta = ObservableMutableMeta{
transformations.forEach { rule ->
rule.selectItems(source).forEach { name ->
rule.transformItem(name, source[name], this)
@ -174,7 +174,7 @@ public class MetaTransformationBuilder {
public fun keep(regex: String) {
transformations.add(
RegexItemTransformationRule(regex.toRegex()) { name, _, Meta ->
setMeta(name, Meta)
set(name, Meta)
})
}
@ -184,7 +184,7 @@ public class MetaTransformationBuilder {
public fun move(from: Name, to: Name, operation: (Meta?) -> Meta? = { it }) {
transformations.add(
SingleItemTransformationRule(from) { _, item ->
setMeta(to, operation(item))
set(to, operation(item))
}
)
}

4
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/misc/Type.kt → dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/misc/DfId.kt
View File

@ -2,9 +2,7 @@ package space.kscience.dataforge.misc
/**
* A text label for internal DataForge type classification. Alternative for mime container type.
*
* The DataForge type notation presumes that type `A.B.C` is the subtype of `A.B`
*/
@MustBeDocumented
@Target(AnnotationTarget.CLASS)
public annotation class Type(val id: String)
public annotation class DfId(val id: String)

5
dataforge-meta/src/commonMain/kotlin/space/kscience/dataforge/names/Name.kt
View File

@ -134,6 +134,11 @@ public val Name.length: Int get() = tokens.size
*/
public fun Name.lastOrNull(): NameToken? = tokens.lastOrNull()
/**
* Last token or throw exception
*/
public fun Name.last(): NameToken = tokens.last()
/**
* First token of the name or null if it is empty
*/

15
dataforge-meta/src/jvmTest/kotlin/space/kscience/dataforge/meta/JvmMutableMetaTest.kt
View File

@ -1,15 +0,0 @@
package space.kscience.dataforge.meta
import org.junit.jupiter.api.Test
import kotlin.test.assertFails
class JvmMutableMetaTest {
@Test
fun recursiveMeta(){
val meta = MutableMeta {
"a" put 2
}
assertFails { meta["child.a"] = meta }
}
}

17
dataforge-scripting/README.md
View File

@ -6,27 +6,18 @@
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-scripting:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-scripting:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-scripting:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-scripting:0.6.2-dev-2")
implementation("space.kscience:dataforge-scripting:0.7.0")
}
```

17
dataforge-workspace/README.md
View File

@ -6,27 +6,18 @@
## Artifact:
The Maven coordinates of this project are `space.kscience:dataforge-workspace:0.6.2-dev-2`.
The Maven coordinates of this project are `space.kscience:dataforge-workspace:0.7.0`.
**Gradle Groovy:**
```groovy
repositories {
maven { url 'https://repo.kotlin.link' }
mavenCentral()
}
dependencies {
implementation 'space.kscience:dataforge-workspace:0.6.2-dev-2'
}
```
**Gradle Kotlin DSL:**
```kotlin
repositories {
maven("https://repo.kotlin.link")
//uncomment to access development builds
//maven("https://maven.pkg.jetbrains.space/spc/p/sci/dev")
mavenCentral()
}
dependencies {
implementation("space.kscience:dataforge-workspace:0.6.2-dev-2")
implementation("space.kscience:dataforge-workspace:0.7.0")
}
```

18
dataforge-workspace/build.gradle.kts
View File

@ -10,14 +10,18 @@ kscience{
useSerialization{
protobuf()
}
dependencies {
api(projects.dataforgeContext)
api(projects.dataforgeData)
api(projects.dataforgeIo)
commonMain{
dependencies {
api(projects.dataforgeContext)
api(projects.dataforgeData)
api(projects.dataforgeIo)
}
}
dependencies(jvmTest){
implementation(spclibs.logback.classic)
implementation(projects.dataforgeIo.dataforgeIoYaml)
jvmTest{
dependencies {
implementation(spclibs.logback.classic)
implementation(projects.dataforgeIo.dataforgeIoYaml)
}
}
}

4
dataforge-workspace/src/commonMain/kotlin/space/kscience/dataforge/workspace/Task.kt
View File

@ -9,7 +9,7 @@ import space.kscience.dataforge.meta.MetaRepr
import space.kscience.dataforge.meta.Specification
import space.kscience.dataforge.meta.descriptors.Described
import space.kscience.dataforge.meta.descriptors.MetaDescriptor
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.workspace.Task.Companion.TYPE
import kotlin.reflect.KType
@ -19,7 +19,7 @@ import kotlin.reflect.typeOf
* A configurable task that could be executed on a workspace. The [TaskResult] represents a lazy result of the task.
* In general no computations should be made until the result is called.
*/
@Type(TYPE)
@DfId(TYPE)
public interface Task<out T : Any> : Described {
/**

4
dataforge-workspace/src/commonMain/kotlin/space/kscience/dataforge/workspace/Workspace.kt
View File

@ -6,7 +6,7 @@ import space.kscience.dataforge.data.DataSet
import space.kscience.dataforge.data.asSequence
import space.kscience.dataforge.meta.Meta
import space.kscience.dataforge.meta.MutableMeta
import space.kscience.dataforge.misc.Type
import space.kscience.dataforge.misc.DfId
import space.kscience.dataforge.names.Name
import space.kscience.dataforge.provider.Provider
@ -18,7 +18,7 @@ public interface DataSelector<T: Any>{
/**
* An environment for pull-mode computation
*/
@Type(Workspace.TYPE)
@DfId(Workspace.TYPE)
public interface Workspace : ContextAware, Provider {
/**
* The whole data node for current workspace

16
dataforge-workspace/src/commonMain/kotlin/space/kscience/dataforge/workspace/taskBuilders.kt
View File

@ -33,9 +33,12 @@ public suspend inline fun <T : Any, reified P : WorkspacePlugin> TaskResultBuild
dependencyMeta: Meta = defaultDependencyMeta,
selectorBuilder: P.() -> TaskReference<T>,
): DataSet<T> {
require(workspace.context.plugins.contains(plugin)){"Plugin $plugin is not loaded into $workspace"}
require(workspace.context.plugins.contains(plugin)) { "Plugin $plugin is not loaded into $workspace" }
val taskReference: TaskReference<T> = plugin.selectorBuilder()
return workspace.produce(plugin.name + taskReference.taskName, dependencyMeta) as TaskResult<T>
val res = workspace.produce(plugin.name + taskReference.taskName, dependencyMeta)
//TODO add explicit check after https://youtrack.jetbrains.com/issue/KT-32956
@Suppress("UNCHECKED_CAST")
return res as TaskResult<T>
}
/**
@ -45,7 +48,7 @@ public suspend inline fun <T : Any, reified P : WorkspacePlugin> TaskResultBuild
* @param dependencyMeta meta used for selector. The same meta is used for caching. By default, uses [defaultDependencyMeta].
* @param selectorBuilder a builder of task from the plugin.
*/
public suspend inline fun <T : Any, reified P : WorkspacePlugin> TaskResultBuilder<*>.from(
public suspend inline fun <reified T : Any, reified P : WorkspacePlugin> TaskResultBuilder<*>.from(
pluginFactory: PluginFactory<P>,
dependencyMeta: Meta = defaultDependencyMeta,
selectorBuilder: P.() -> TaskReference<T>,
@ -53,7 +56,10 @@ public suspend inline fun <T : Any, reified P : WorkspacePlugin> TaskResultBuild
val plugin = workspace.context.plugins[pluginFactory]
?: error("Plugin ${pluginFactory.tag} not loaded into workspace context")
val taskReference: TaskReference<T> = plugin.selectorBuilder()
return workspace.produce(plugin.name + taskReference.taskName, dependencyMeta) as TaskResult<T>
val res = workspace.produce(plugin.name + taskReference.taskName, dependencyMeta)
//TODO explicit check after https://youtrack.jetbrains.com/issue/KT-32956
@Suppress("UNCHECKED_CAST")
return res as TaskResult<T>
}
public val TaskResultBuilder<*>.allData: DataSelector<*>
@ -79,7 +85,7 @@ public suspend inline fun <T : Any, reified R : Any> TaskResultBuilder<R>.pipeFr
) {
from(selector, dependencyMeta).forEach { data ->
val meta = data.meta.toMutableMeta().apply {
taskMeta[taskName]?.let { taskName.put(it) }
taskMeta[taskName]?.let { taskName.put(it) }
dataMetaTransform(data.name)
}

19
dataforge-workspace/src/jvmMain/kotlin/space/kscience/dataforge/workspace/FileWorkspaceCache.kt
View File

@ -1,9 +1,6 @@
package space.kscience.dataforge.workspace
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import io.ktor.utils.io.core.readBytes
import io.ktor.utils.io.core.writeFully
import kotlinx.io.*
import kotlinx.serialization.ExperimentalSerializationApi
import kotlinx.serialization.KSerializer
import kotlinx.serialization.json.Json
@ -30,10 +27,10 @@ public class JsonIOFormat<T : Any>(override val type: KType) : IOFormat<T> {
@Suppress("UNCHECKED_CAST")
private val serializer: KSerializer<T> = serializer(type) as KSerializer<T>
override fun readObject(input: Input): T = Json.decodeFromString(serializer, input.readUtf8String())
override fun readFrom(source: Source): T = Json.decodeFromString(serializer, source.readString())
override fun writeObject(output: Output, obj: T) {
output.writeUtf8String(Json.encodeToString(serializer, obj))
override fun writeTo(sink: Sink, obj: T) {
sink.writeString(Json.encodeToString(serializer, obj))
}
}
@ -43,10 +40,10 @@ public class ProtobufIOFormat<T : Any>(override val type: KType) : IOFormat<T> {
@Suppress("UNCHECKED_CAST")
private val serializer: KSerializer<T> = serializer(type) as KSerializer<T>
override fun readObject(input: Input): T = ProtoBuf.decodeFromByteArray(serializer, input.readBytes())
override fun readFrom(source: Source): T = ProtoBuf.decodeFromByteArray(serializer, source.readByteArray())
override fun writeObject(output: Output, obj: T) {
output.writeFully(ProtoBuf.encodeToByteArray(serializer, obj))
override fun writeTo(sink: Sink, obj: T) {
sink.write(ProtoBuf.encodeToByteArray(serializer, obj))
}
}
@ -88,7 +85,7 @@ public class FileWorkspaceCache(public val cacheDirectory: Path) : WorkspaceCach
val envelope = Envelope {
meta = data.meta
data {
writeObject(format, result)
writeWith(format, result)
}
}
io.writeEnvelopeFile(path, envelope)

15
dataforge-workspace/src/jvmMain/kotlin/space/kscience/dataforge/workspace/zipData.kt
View File

@ -1,13 +1,10 @@
package space.kscience.dataforge.workspace
import io.ktor.utils.io.streams.asOutput
import kotlinx.coroutines.Dispatchers
import kotlinx.coroutines.withContext
import space.kscience.dataforge.data.DataTree
import space.kscience.dataforge.data.DataTreeItem
import space.kscience.dataforge.io.EnvelopeFormat
import space.kscience.dataforge.io.IOFormat
import space.kscience.dataforge.io.TaggedEnvelopeFormat
import space.kscience.dataforge.io.*
import space.kscience.dataforge.misc.DFExperimental
import java.nio.file.Files
import java.nio.file.Path
@ -28,11 +25,15 @@ private suspend fun <T : Any> ZipOutputStream.writeNode(
val envelope = treeItem.data.toEnvelope(dataFormat)
val entry = ZipEntry(name)
putNextEntry(entry)
asOutput().run {
envelopeFormat.writeObject(this, envelope)
flush()
//TODO remove additional copy
val bytes = ByteArray {
writeWith(envelopeFormat, envelope)
}
write(bytes)
}
is DataTreeItem.Node -> {
val entry = ZipEntry("$name/")
putNextEntry(entry)

24
dataforge-workspace/src/jvmTest/kotlin/space/kscience/dataforge/workspace/FileDataTest.kt
View File

@ -1,12 +1,18 @@
package space.kscience.dataforge.workspace
import io.ktor.utils.io.core.Input
import io.ktor.utils.io.core.Output
import kotlinx.coroutines.runBlocking
import kotlinx.coroutines.test.runTest
import kotlinx.io.Sink
import kotlinx.io.Source
import kotlinx.io.readString
import kotlinx.io.writeString
import space.kscience.dataforge.context.Context
import space.kscience.dataforge.context.Global
import space.kscience.dataforge.data.*
import space.kscience.dataforge.io.*
import space.kscience.dataforge.io.Envelope
import space.kscience.dataforge.io.IOFormat
import space.kscience.dataforge.io.io
import space.kscience.dataforge.io.readEnvelopeFile
import space.kscience.dataforge.io.yaml.YamlPlugin
import space.kscience.dataforge.meta.get
import space.kscience.dataforge.misc.DFExperimental
@ -36,11 +42,11 @@ class FileDataTest {
object StringIOFormat : IOFormat<String> {
override val type: KType get() = typeOf<String>()
override fun writeObject(output: Output, obj: String) {
output.writeUtf8String(obj)
override fun writeTo(sink: Sink, obj: String) {
sink.writeString(obj)
}
override fun readObject(input: Input): String = input.readUtf8String()
override fun readFrom(source: Source): String = source.readString()
}
@Test
@ -59,9 +65,9 @@ class FileDataTest {
@Test
@DFExperimental
fun testZipWriteRead() = with(Global.io) {
val zip = Files.createTempFile("df_data_node", ".zip")
runBlocking {
fun testZipWriteRead() = runTest {
with(Global.io) {
val zip = Files.createTempFile("df_data_node", ".zip")
dataNode.writeZip(zip, StringIOFormat)
println(zip.toUri().toString())
val reconstructed = readDataDirectory(zip) { _, _ -> StringIOFormat }

3
gradle.properties
View File

@ -6,4 +6,5 @@ kotlin.mpp.stability.nowarn=true
kotlin.incremental.js.ir=true
kotlin.native.ignoreDisabledTargets=true
toolsVersion=0.14.9-kotlin-1.8.20
toolsVersion=0.15.1-kotlin-1.9.21
#kotlin.experimental.tryK2=true

2
gradle/wrapper/gradle-wrapper.properties vendored
View File

@ -1,5 +1,5 @@
distributionBase=GRADLE_USER_HOME
distributionPath=wrapper/dists
distributionUrl=https\://services.gradle.org/distributions/gradle-8.2-bin.zip
distributionUrl=https\://services.gradle.org/distributions/gradle-8.4-bin.zip
zipStoreBase=GRADLE_USER_HOME
zipStorePath=wrapper/dists

2
settings.gradle.kts
View File

@ -1,7 +1,6 @@
rootProject.name = "dataforge-core"
enableFeaturePreview("TYPESAFE_PROJECT_ACCESSORS")
//enableFeaturePreview("VERSION_CATALOGS")
pluginManagement {
@ -15,6 +14,7 @@ pluginManagement {
}
plugins {
id("org.gradle.toolchains.foojay-resolver-convention") version "0.7.0"
id("space.kscience.gradle.project") version toolsVersion
id("space.kscience.gradle.mpp") version toolsVersion
id("space.kscience.gradle.jvm") version toolsVersion