Revision of numass data architecture

numass-core/src/main/java/inr/numass/data/LegacyDataReader.java

@@ -18,6 +18,7 @@ package inr.numass.data;
 import hep.dataforge.data.FileDataFactory;
 import hep.dataforge.data.binary.Binary;
 import hep.dataforge.meta.Meta;
+import inr.numass.data.events.NumassEvent;
 
 import java.io.*;
 import java.time.LocalDateTime;
@@ -97,7 +98,7 @@ public class LegacyDataReader {
         return date;
     }
 
-    private NMEvent readEvent(int b, double timeDiv) throws IOException {
+    private NumassEvent readEvent(int b, double timeDiv) throws IOException {
         short chanel;
         long time;
 
@@ -125,7 +126,7 @@ public class LegacyDataReader {
                 throw new IOException("Event head expected");
         }
 
-        return new NMEvent(chanel, time / timeDiv);
+        return new NumassEvent(chanel, time / timeDiv);
     }
 
     private RawNMFile readFile(String name) throws IOException {
@@ -207,7 +208,7 @@ public class LegacyDataReader {
 
         lab = readByte();
 
-        List<NMEvent> events = new ArrayList<>();
+        List<NumassEvent> events = new ArrayList<>();
         while (lab == 0xBF) {
             skip(4);//badHV
             lab = readByte();

numass-core/src/main/java/inr/numass/data/NumassPoint.java

@@ -10,6 +10,7 @@ import java.util.Map;
 import java.util.stream.Collectors;
 
 /**
+ * A general representation of single voltage measurement.
  * Created by darksnake on 13-Apr-17.
  */
 public interface NumassPoint {

numass-core/src/main/java/inr/numass/data/RawNMFile.java

@@ -19,6 +19,7 @@ import hep.dataforge.description.ValueDef;
 import hep.dataforge.meta.Meta;
 import hep.dataforge.meta.MetaBuilder;
 import hep.dataforge.names.NamedMetaHolder;
+import inr.numass.data.events.NumassEvent;
 
 import java.io.BufferedOutputStream;
 import java.io.OutputStream;
@@ -61,7 +62,7 @@ public class RawNMFile extends NamedMetaHolder {
         long counter = 0;
         for (RawNMPoint point : this.getData()) {
             double U = point.getUread();
-            for (NMEvent event : point.getEvents()) {
+            for (NumassEvent event : point.getEvents()) {
                 counter++;
                 writer.printf("%d\t%f\t%d\t%.1f\t%.2f%n", counter, event.getTime(), event.getChanel(), point.getLength(), U);
             }
@@ -123,12 +124,12 @@ public class RawNMFile extends NamedMetaHolder {
 //    public void putEvent(double U, short chanel, double time) {
 //        for (RawNMPoint point : this.getData()) {
 //            if (U == point.getUread()) {
-//                point.putEvent(new NMEvent(chanel, time));
+//                point.putEvent(new NumassEvent(chanel, time));
 //                return;
 //            }
 //        }
 //        RawNMPoint newpoint = new RawNMPoint();
-//        newpoint.putEvent(new NMEvent(chanel, time));
+//        newpoint.putEvent(new NumassEvent(chanel, time));
 //        this.putPoint(newpoint);
 //    }
 

numass-core/src/main/java/inr/numass/data/RawNMPoint.java

@@ -15,6 +15,8 @@
  */
 package inr.numass.data;
 
+import inr.numass.data.events.NumassEvent;
+
 import java.time.Instant;
 import java.util.ArrayList;
 import java.util.List;
@@ -30,27 +32,27 @@ public class RawNMPoint {
     public static int MAX_CHANEL = 4095;
 
     private Instant startTime;
-    private final List<NMEvent> events;
+    private final List<NumassEvent> events;
     private double length;
     private double uread;
 
     private double uset;
 
-    public RawNMPoint(double U, List<NMEvent> events, double t) {
+    public RawNMPoint(double U, List<NumassEvent> events, double t) {
         this.uset = U;
         this.uread = U;
         this.events = events;
         this.length = t;
     }
 
-    public RawNMPoint(double Uset, double Uread, List<NMEvent> events, double t) {
+    public RawNMPoint(double Uset, double Uread, List<NumassEvent> events, double t) {
         this.uset = Uset;
         this.uread = Uread;
         this.events = events;
         this.length = t;
     }
 
-    public RawNMPoint(double uset, double uread, List<NMEvent> events, double t, Instant absouteTime) {
+    public RawNMPoint(double uset, double uread, List<NumassEvent> events, double t, Instant absouteTime) {
         this.uset = uset;
         this.uread = uread;
         this.length = t;
@@ -67,7 +69,7 @@ public class RawNMPoint {
 
 //    @Override
 //    public RawNMPoint clone() {
-//        ArrayList<NMEvent> newevents = new ArrayList<>();
+//        ArrayList<NumassEvent> newevents = new ArrayList<>();
 //        newevents.addAll(this.getEvents());
 //        return new RawNMPoint(getUset(), getUread(), newevents, getLength());
 //    }
@@ -87,7 +89,7 @@ public class RawNMPoint {
     /**
      * @return the events
      */
-    public List<NMEvent> getEvents() {
+    public List<NumassEvent> getEvents() {
         return events;
     }
 
@@ -130,24 +132,24 @@ public class RawNMPoint {
     }
 
     public RawNMPoint merge(RawNMPoint point) {
-        List<NMEvent> events = new ArrayList<>(this.events);
+        List<NumassEvent> events = new ArrayList<>(this.events);
-        for (NMEvent newEvent : point.getEvents()) {
+        for (NumassEvent newEvent : point.getEvents()) {
-            events.add(new NMEvent(newEvent.getChanel(), newEvent.getTime() + this.getLength()));
+            events.add(new NumassEvent(newEvent.getChanel(), newEvent.getTime() + this.getLength()));
         }
         double length = this.length + point.length;
         double uread = (this.uread + point.uread) / 2;
         return new RawNMPoint(this.uset, uread, events, length, this.startTime);
     }
 
-//    void putEvent(NMEvent event) {
+//    void putEvent(NumassEvent event) {
 //        events.add(event);
 //    }
 
     public RawNMPoint selectChanels(int from, int to) {
         assert to > from;
 
-        List<NMEvent> res = new ArrayList<>();
+        List<NumassEvent> res = new ArrayList<>();
-        for (NMEvent event : this.getEvents()) {
+        for (NumassEvent event : this.getEvents()) {
             if ((event.getChanel() >= from) && (event.getChanel() <= to)) {
                 res.add(event);
             }

numass-core/src/main/java/inr/numass/data/events/NumassAnalyzer.java

@@ -0,0 +1,30 @@
+package inr.numass.data.events;
+
+import hep.dataforge.meta.Meta;
+import hep.dataforge.tables.Table;
+
+/**
+ * A general raw data analysis utility. Could have different implementations
+ * Created by darksnake on 06-Jul-17.
+ */
+public interface NumassAnalyzer {
+    /**
+     * Caclulate the number of events in given window
+     *
+     * @param block
+     * @param from
+     * @param to
+     * @return
+     */
+    int getCountInWindow(NumassBlock block, int from, int to);
+
+    default int getMaxChannel() {
+        return 4096;
+    }
+
+    default int getCountTotal(NumassBlock block) {
+        return getCountInWindow(block, 0, getMaxChannel());
+    }
+
+    public Table getSpectrum(Meta config);
+}

numass-core/src/main/java/inr/numass/data/events/NumassBlock.java

@@ -0,0 +1,36 @@
+package inr.numass.data.events;
+
+import java.time.Duration;
+import java.time.Instant;
+import java.util.stream.Stream;
+
+/**
+ * A single continuous measurement block. The block can contain both isolated events and signal frames
+ * <p>
+ * Created by darksnake on 06-Jul-17.
+ */
+public interface NumassBlock {
+    /**
+     * The absolute start time of the block
+     * @return
+     */
+    Instant getStartTime();
+
+    /**
+     * The length of the block
+     * @return
+     */
+    Duration getLength();
+
+    /**
+     * Stream of isolated events. Could be empty
+     * @return
+     */
+    Stream<NumassEvent> getEvents();
+
+    /**
+     * Stream of frames. Could be empty
+     * @return
+     */
+    Stream<NumassFrame> getFrames();
+}

numass-core/src/main/java/inr/numass/data/events/NumassEvent.java

@@ -13,26 +13,21 @@
  * See the License for the specific language governing permissions and
  * limitations under the License.
  */
-package inr.numass.data;
+package inr.numass.data.events;
 
 /**
- *
+ * A single numass event with given amplitude ant time.
  * @author Darksnake
  */
-public class NMEvent{
+public class NumassEvent {
     protected final short chanel;
     protected final double time;
 
-    public NMEvent(short chanel, double time) {
+    public NumassEvent(short chanel, double time) {
         this.chanel = chanel;
         this.time = time;
     }
 
-//    @Override
-//    public NMEvent clone() {
-//        return new NMEvent(chanel, time);
-//    }
-
     /**
      * @return the chanel
      */

numass-core/src/main/java/inr/numass/data/events/NumassFrame.java

@@ -0,0 +1,50 @@
+package inr.numass.data.events;
+
+import java.nio.ShortBuffer;
+import java.time.Duration;
+import java.time.Instant;
+
+/**
+ * The continuous frame of digital detector data
+ * Created by darksnake on 06-Jul-17.
+ */
+public class NumassFrame {
+
+    /**
+     * The absolute start time of the frame
+     */
+    private final Instant startTime;
+
+    /**
+     * The buffered signal shape in ticks
+     */
+    private final ShortBuffer signal;
+
+    /**
+     * The time interval per tick
+     */
+    private final Duration tickSize;
+
+
+    public NumassFrame(Instant startTime, Duration tickSize, ShortBuffer signal) {
+        this.startTime = startTime;
+        this.signal = signal;
+        this.tickSize = tickSize;
+    }
+
+    public Instant getStartTime() {
+        return startTime;
+    }
+
+    public ShortBuffer getSignal() {
+        return signal;
+    }
+
+    public Duration getTickSize() {
+        return tickSize;
+    }
+
+    public Duration getLength() {
+        return tickSize.multipliedBy(signal.capacity());
+    }
+}

numass-core/src/main/java/inr/numass/data/events/NumassPoint.java

@@ -0,0 +1,15 @@
+package inr.numass.data.events;
+
+import hep.dataforge.meta.Metoid;
+
+import java.util.stream.Stream;
+
+/**
+ * Created by darksnake on 06-Jul-17.
+ */
+public interface NumassPoint extends Metoid {
+
+    
+
+    Stream<NumassBlock> getBlocks();
+}

numass-core/src/main/java/inr/numass/storage/NumassDataLoader.java

@@ -30,7 +30,11 @@ import hep.dataforge.storage.filestorage.FileEnvelope;
 import hep.dataforge.storage.filestorage.FileStorage;
 import hep.dataforge.storage.loaders.AbstractLoader;
 import hep.dataforge.tables.Table;
-import inr.numass.data.*;
+import inr.numass.data.NumassData;
+import inr.numass.data.NumassPoint;
+import inr.numass.data.PointBuilders;
+import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 import org.slf4j.LoggerFactory;
 
 import java.io.IOException;
@@ -164,7 +168,7 @@ public class NumassDataLoader extends AbstractLoader implements ObjectLoader<Env
      * @return
      */
     private synchronized RawNMPoint readRawPoint(Envelope envelope) {
-        List<NMEvent> events = new ArrayList<>();
+        List<NumassEvent> events = new ArrayList<>();
 
         double timeCoef = envelope.meta().getDouble("time_coeff", 50);
         try (ReadableByteChannel inChannel = envelope.getData().getChannel()) {
@@ -176,7 +180,7 @@ public class NumassDataLoader extends AbstractLoader implements ObjectLoader<Env
                     short channel = (short) Short.toUnsignedInt(buffer.getShort());
                     long time = Integer.toUnsignedLong(buffer.getInt());
                     byte status = buffer.get(); // status is ignored
-                    NMEvent event = new NMEvent(channel, (double) time * timeCoef * 1e-9);
+                    NumassEvent event = new NumassEvent(channel, (double) time * timeCoef * 1e-9);
                     events.add(event);
                 }
                 buffer.clear(); // do something with the data and clear/compact it.

numass-main/src/main/groovy/inr/numass/data/PointAnalyzer.groovy

@@ -3,6 +3,7 @@ package inr.numass.data
 import groovy.transform.CompileStatic
 import hep.dataforge.maths.histogram.Histogram
 import hep.dataforge.maths.histogram.UnivariateHistogram
+import inr.numass.data.events.NumassEvent
 
 import java.util.stream.DoubleStream
 
@@ -15,10 +16,10 @@ class PointAnalyzer {
     static Result analyzePoint(RawNMPoint point, double t0 = 0, int loChannel = 0, int upChannel = 4000) {
         int totalN = 0
         double totalT = 0;
-        NMEvent lastEvent = point.events[0];
+        NumassEvent lastEvent = point.events[0];
 
         for (int i = 1; i < point.events.size(); i++) {
-            NMEvent event = point.events[i];
+            NumassEvent event = point.events[i];
             double t = event.time - lastEvent.time;
             if (t < 0) {
                 lastEvent = event
@@ -32,12 +33,14 @@ class PointAnalyzer {
         return new Result(cr: cr, crErr: cr / Math.sqrt(totalN), num: totalN, t0: t0, loChannel: loChannel, upChannel: upChannel)
     }
 
-    private static DoubleStream timeChain(RawNMPoint point, int loChannel = 0, int upChannel = 4000) {
+    static DoubleStream timeChain(int loChannel = 0, int upChannel = 4000, RawNMPoint... points) {
+        DoubleStream stream = DoubleStream.empty();
+        for(RawNMPoint point: points){
             List<Double> ts = new ArrayList<>();
-        NMEvent lastEvent = point.events[0];
+            NumassEvent lastEvent = point.events[0];
 
             for (int i = 1; i < point.events.size(); i++) {
-            NMEvent event = point.events[i];
+                NumassEvent event = point.events[i];
                 double t = event.time - lastEvent.time;
                 if (t < 0) {
                     lastEvent = event
@@ -46,7 +49,9 @@ class PointAnalyzer {
                     lastEvent = event
                 }
             }
-        return ts.stream().mapToDouble { it }
+            stream = DoubleStream.concat(stream,ts.stream().mapToDouble{it});
+        }
+        return stream
     }
 
     /**
@@ -59,12 +64,16 @@ class PointAnalyzer {
      * @return
      */
     static long count(RawNMPoint point, double t1, double t2, int loChannel = 0, int upChannel = 4000) {
-        return timeChain(point, loChannel, upChannel).filter { it > t1 && it < t2 }.count();
+        return timeChain(loChannel, upChannel, point).filter { it > t1 && it < t2 }.count();
     }
 
 
     static Histogram histogram(RawNMPoint point, int loChannel = 0, int upChannel = 4000, double binSize = 1e-6d, int binNum = 500) {
-        return UnivariateHistogram.buildUniform(0d, binSize*binNum, binSize).fill(timeChain(point, loChannel, upChannel))
+        return UnivariateHistogram.buildUniform(0d, binSize*binNum, binSize).fill(timeChain(loChannel, upChannel, point))
+    }
+
+    static Histogram histogram(DoubleStream stream, double binSize = 1e-6d, int binNum = 500) {
+        return UnivariateHistogram.buildUniform(0d, binSize*binNum, binSize).fill(stream)
     }
 
     static class Result {

numass-main/src/main/groovy/inr/numass/scripts/times/MultiPointHistogram.groovy

@@ -0,0 +1,57 @@
+package inr.numass.scripts.times
+
+import hep.dataforge.context.Context
+import hep.dataforge.context.Global
+import hep.dataforge.grind.GrindShell
+import hep.dataforge.grind.helpers.PlotHelper
+import hep.dataforge.plots.fx.FXPlotManager
+import inr.numass.NumassPlugin
+import inr.numass.data.PointAnalyzer
+import inr.numass.data.RawNMPoint
+import inr.numass.storage.NumassDataLoader
+import inr.numass.storage.NumassStorage
+import inr.numass.storage.NumassStorageFactory
+
+/**
+ * Created by darksnake on 06-Jul-17.
+ */
+
+
+Context ctx = Global.instance()
+ctx.pluginManager().load(FXPlotManager)
+ctx.pluginManager().load(NumassPlugin.class)
+
+new GrindShell(ctx).eval {
+    PlotHelper plot = plots
+    File rootDir = new File("D:\\Work\\Numass\\data\\2017_05\\Fill_2")
+
+    NumassStorage storage = NumassStorageFactory.buildLocal(rootDir);
+
+    def pattern = "set_.{1,2}"
+
+    List<NumassDataLoader> loaders = storage.loaders().findAll{it.name.matches(pattern)}.collect{it as NumassDataLoader}
+
+    println "Found ${loaders.size()} loaders matching pattern"
+
+    def hv = 16000.toString();
+    List<RawNMPoint> points = loaders.collect { loader -> loader.optRawPoint(hv).get()}
+
+    def loChannel = 400;
+    def upChannel = 800;
+
+    def chain = PointAnalyzer.timeChain(loChannel,upChannel, points as RawNMPoint[])
+
+    def histogram = PointAnalyzer.histogram(chain, 5e-6,500).asTable();
+
+    println "finished histogram calculation..."
+
+    plot.configure("histogram") {
+        yAxis(type: "log")
+    }
+
+    plot.plot(name: hv, frame: "histogram", showLine: true, showSymbol: false, showErrors: false, connectionType: "step", histogram, {
+        adapter("x.value": "x", "y.value": "count")
+    })
+
+    storage.close()
+}

numass-main/src/main/groovy/inr/numass/scripts/times/TestPointAnalyzer.groovy

@@ -1,4 +1,4 @@
-package inr.numass.scripts
+package inr.numass.scripts.times
 
 import hep.dataforge.context.Context
 import hep.dataforge.context.Global
@@ -25,15 +25,15 @@ GrindShell shell = new GrindShell(ctx)
 
 shell.eval {
     PlotHelper plot = plots
-    File rootDir = new File("D:\\Work\\Numass\\data\\2017_05\\Fill_1C")
+    File rootDir = new File("D:\\Work\\Numass\\data\\2017_05\\Fill_1")
 
     NumassStorage storage = NumassStorageFactory.buildLocal(rootDir);
 
-    def set = "set_6"
+    def set = "set_1"
-    def hv = 15000;
+    def hv = 18400;
 
-    def loChannel = 3000;
+    def loChannel = 400;
-    def upChannel = 3600;
+    def upChannel = 2000;
 
     def point = storage.provide("loader::$set/rawPoint::$hv", RawNMPoint.class).get();
 

numass-main/src/main/java/inr/numass/debunch/DebunchData.java

@@ -15,8 +15,8 @@
  */
 package inr.numass.debunch;
 
-import inr.numass.data.NMEvent;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 
 import java.util.ArrayList;
 import java.util.Collections;
@@ -40,11 +40,11 @@ class DebunchData {
      * @param to
      * @return
      */
-    private static List<NMEvent> removeFrame(List<NMEvent> events, Frame frame) {
+    private static List<NumassEvent> removeFrame(List<NumassEvent> events, Frame frame) {
-        List<NMEvent> res = new ArrayList<>();
+        List<NumassEvent> res = new ArrayList<>();
-        for (NMEvent event : events) {
+        for (NumassEvent event : events) {
             if (event.getTime() >= frame.getEnd()) {
-                res.add(new NMEvent(event.getChanel(), event.getTime() - frame.length()));
+                res.add(new NumassEvent(event.getChanel(), event.getTime() - frame.length()));
             } else if (event.getTime() <= frame.getBegin()) {
                 res.add(event);
             }
@@ -53,7 +53,7 @@ class DebunchData {
     }
 
     private final List<Frame> bunches = new ArrayList<>();
-    private final List<NMEvent> events;
+    private final List<NumassEvent> events;
     private final double length;
 
     public DebunchData(RawNMPoint point) {
@@ -71,7 +71,7 @@ class DebunchData {
             end = this.getLength();
         }
 
-        ArrayList<NMEvent> sum = new ArrayList<>();
+        ArrayList<NumassEvent> sum = new ArrayList<>();
 
         int i = 0;
         while ((i < this.size()) && (events.get(i).getTime() < start)) {
@@ -146,8 +146,8 @@ class DebunchData {
      *
      * @return
      */
-    public List<NMEvent> getDebunchedEvents() {
+    public List<NumassEvent> getDebunchedEvents() {
-        List<NMEvent> res = getEvents();
+        List<NumassEvent> res = getEvents();
         for (Frame frame : getBunches()) {
             res = removeFrame(res, frame);
         }
@@ -171,7 +171,7 @@ class DebunchData {
         }
     }
 
-    public List<NMEvent> getEvents() {
+    public List<NumassEvent> getEvents() {
         return events;
     }
 
@@ -196,10 +196,10 @@ class DebunchData {
         return this.getEvents().size();
     }
 
-    private static class EventComparator implements Comparator<NMEvent> {
+    private static class EventComparator implements Comparator<NumassEvent> {
 
         @Override
-        public int compare(NMEvent o1, NMEvent o2) {
+        public int compare(NumassEvent o1, NumassEvent o2) {
             return (int) Math.signum(o1.getTime() - o2.getTime());
         }
 

numass-main/src/main/java/inr/numass/debunch/DebunchEvent.java

@@ -15,15 +15,15 @@
  */
 package inr.numass.debunch;
 
-import inr.numass.data.NMEvent;
+import inr.numass.data.events.NumassEvent;
 
 /**
  *
  * @author Darksnake
  */
-public class DebunchEvent extends NMEvent {
+public class DebunchEvent extends NumassEvent {
 
-    public static double getEventWeight(NMEvent event) {
+    public static double getEventWeight(NumassEvent event) {
         if (event instanceof DebunchEvent) {
             return ((DebunchEvent) event).getWeight();
         } else {
@@ -39,7 +39,7 @@ public class DebunchEvent extends NMEvent {
      */
     private double weight;
 
-    public DebunchEvent(NMEvent event, double weight) {
+    public DebunchEvent(NumassEvent event, double weight) {
         super(event.getChanel(), event.getTime());
         this.weight = weight;
     }

numass-main/src/main/java/inr/numass/debunch/DebunchReport.java

@@ -15,8 +15,8 @@
  */
 package inr.numass.debunch;
 
-import inr.numass.data.NMEvent;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 
 import java.util.List;
 
@@ -29,7 +29,7 @@ public interface DebunchReport {
     RawNMPoint getPoint();
     
     List<Frame> getBunches();
-    List<NMEvent> getBunchEvents();
+    List<NumassEvent> getBunchEvents();
     
     double eventsFiltred();
     double timeFiltred();

numass-main/src/main/java/inr/numass/debunch/DebunchReportImpl.java

@@ -15,8 +15,8 @@
  */
 package inr.numass.debunch;
 
-import inr.numass.data.NMEvent;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 
 import java.util.ArrayList;
 import java.util.List;
@@ -52,8 +52,8 @@ public class DebunchReportImpl implements DebunchReport {
     }
 
     @Override
-    public List<NMEvent> getBunchEvents() {
+    public List<NumassEvent> getBunchEvents() {
-        List<NMEvent> res = new ArrayList<>();
+        List<NumassEvent> res = new ArrayList<>();
         for (Frame interval : getBunches()) {
             res.addAll(interval.getEvents());
         }

numass-main/src/main/java/inr/numass/debunch/Frame.java

@@ -15,7 +15,7 @@
  */
 package inr.numass.debunch;
 
-import inr.numass.data.NMEvent;
+import inr.numass.data.events.NumassEvent;
 import org.apache.commons.math3.distribution.PoissonDistribution;
 
 import java.util.ArrayList;
@@ -29,10 +29,10 @@ public class Frame {
 
     private final double begin;
     private final double end;
-    private List<NMEvent> events;
+    private List<NumassEvent> events;
     private final int eventsCount;
 
-    public Frame(double begin, double end, List<NMEvent> events) {
+    public Frame(double begin, double end, List<NumassEvent> events) {
         assert end > begin;
         this.begin = begin;
         this.end = end;
@@ -82,7 +82,7 @@ public class Frame {
         return end;
     }
 
-    public List<NMEvent> getEvents() {
+    public List<NumassEvent> getEvents() {
         if(events!=null)
             return events;
         else

numass-main/src/main/java/inr/numass/utils/BunchGenerator.java

@@ -15,8 +15,8 @@
  */
 package inr.numass.utils;
 
-import inr.numass.data.NMEvent;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 import org.apache.commons.math3.random.MersenneTwister;
 import org.apache.commons.math3.random.RandomGenerator;
 import org.apache.commons.math3.random.SynchronizedRandomGenerator;
@@ -52,12 +52,12 @@ public class BunchGenerator {
         expGen = new ExpGenerator(gen);
     }
 
-    public ArrayList<NMEvent> generate(double dist, double length, double timeShift, boolean isBunch) {
+    public ArrayList<NumassEvent> generate(double dist, double length, double timeShift, boolean isBunch) {
-        ArrayList<NMEvent> res = new ArrayList<>();
+        ArrayList<NumassEvent> res = new ArrayList<>();
         ArrayList<Double> events = generateEvents(dist, length);
         for (Double event : events) {
             if (event < length) {
-                res.add(new NMEvent((short)0,event + timeShift));
+                res.add(new NumassEvent((short)0,event + timeShift));
 //                if (isBunch) {
 //                    res.add(new DebunchEvent(event + timeShift, 10));
 //                } else {
@@ -104,16 +104,16 @@ public class BunchGenerator {
         return res;
     }
 
-    public ArrayList<NMEvent> generateNormalEvents(double measurementTime) {
+    public ArrayList<NumassEvent> generateNormalEvents(double measurementTime) {
         return generate(1 / cr, measurementTime, 0, false);
     }
 
-    public ArrayList<NMEvent> generateTriangle(double dist, double length, double timeShift, boolean isBunch) {
+    public ArrayList<NumassEvent> generateTriangle(double dist, double length, double timeShift, boolean isBunch) {
-        ArrayList<NMEvent> res = new ArrayList<>();
+        ArrayList<NumassEvent> res = new ArrayList<>();
         ArrayList<Double> events = generateEventsTriangle(dist, length);
         for (Double event : events) {
             if (event < length) {
-                res.add(new NMEvent((short)0,event + timeShift));                  
+                res.add(new NumassEvent((short)0,event + timeShift));
 //                if (isBunch) {
 //                    res.add(new DebunchEvent(event + timeShift, 10));
 //                } else {
@@ -131,7 +131,7 @@ public class BunchGenerator {
      * @return
      */
     public RawNMPoint generateWithBunches(double measurementTime) {
-        ArrayList<NMEvent> res = generateNormalEvents(measurementTime);
+        ArrayList<NumassEvent> res = generateNormalEvents(measurementTime);
         ArrayList<Double> bunchList = generateEvents(bunchDist, measurementTime);
         for (Double bunchPos : bunchList) {
             res.addAll(generate(1 / bunchCr, bunchLength, bunchPos, true));
@@ -145,7 +145,7 @@ public class BunchGenerator {
      * @return
      */
     public RawNMPoint generateWithRandomBunches(double measurementTime) {
-        ArrayList<NMEvent> res = generateNormalEvents(measurementTime);
+        ArrayList<NumassEvent> res = generateNormalEvents(measurementTime);
         ArrayList<Double> bunchList = generateEvents(bunchDist, measurementTime);
         for (Double bunchPos : bunchList) {
             double l = expGen.nextSafeGaussian(bunchLength, bunchLength / 3);
@@ -156,7 +156,7 @@ public class BunchGenerator {
     }
 
     public RawNMPoint generateWithTriangleBunches(double measurementTime) {
-        ArrayList<NMEvent> res = generateNormalEvents(measurementTime);
+        ArrayList<NumassEvent> res = generateNormalEvents(measurementTime);
         ArrayList<Double> bunchList = generateEvents(bunchDist, measurementTime);
         for (Double bunchPos : bunchList) {
             res.addAll(generateTriangle(1 / bunchCr, bunchLength, bunchPos, true));

numass-main/src/main/java/inr/numass/utils/NMEventGenerator.java

@@ -16,9 +16,9 @@
 package inr.numass.utils;
 
 import hep.dataforge.meta.Meta;
-import inr.numass.data.NMEvent;
 import inr.numass.data.NumassPoint;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 import org.apache.commons.math3.distribution.EnumeratedRealDistribution;
 import org.apache.commons.math3.distribution.RealDistribution;
 import org.apache.commons.math3.random.EmpiricalDistribution;
@@ -34,12 +34,12 @@ import java.util.function.Supplier;
  *
  * @author Darksnake
  */
-public class NMEventGenerator implements Supplier<NMEvent> {
+public class NMEventGenerator implements Supplier<NumassEvent> {
 
     protected final RandomGenerator rnd;
     protected double cr;
     protected RealDistribution distribution;
-    protected NMEvent prevEvent;
+    protected NumassEvent prevEvent;
 
     public NMEventGenerator(RandomGenerator rnd, double cr) {
         this.cr = cr;
@@ -120,7 +120,7 @@ public class NMEventGenerator implements Supplier<NMEvent> {
     }
 
 
-    protected NMEvent nextEvent(NMEvent prev) {
+    protected NumassEvent nextEvent(NumassEvent prev) {
         short chanel;
 
         if (distribution != null) {
@@ -129,12 +129,12 @@ public class NMEventGenerator implements Supplier<NMEvent> {
             chanel = 1600;
         }
 
-        return new NMEvent(chanel, (prev == null ? 0 : prev.getTime()) + nextExpDecay(1d / cr));
+        return new NumassEvent(chanel, (prev == null ? 0 : prev.getTime()) + nextExpDecay(1d / cr));
     }
 
 
     @Override
-    public synchronized NMEvent get() {
+    public synchronized NumassEvent get() {
         return prevEvent = nextEvent(prevEvent);
     }
 

numass-main/src/main/java/inr/numass/utils/NMEventGeneratorWithPulser.java

@@ -1,7 +1,7 @@
 package inr.numass.utils;
 
 import hep.dataforge.meta.Meta;
-import inr.numass.data.NMEvent;
+import inr.numass.data.events.NumassEvent;
 import org.apache.commons.math3.distribution.NormalDistribution;
 import org.apache.commons.math3.distribution.RealDistribution;
 import org.apache.commons.math3.random.RandomGenerator;
@@ -12,8 +12,8 @@ import org.apache.commons.math3.random.RandomGenerator;
 public class NMEventGeneratorWithPulser extends NMEventGenerator {
     private RealDistribution pulserChanelDistribution;
     private double pulserDist;
-    private NMEvent pulserEvent;
+    private NumassEvent pulserEvent;
-    private NMEvent nextEvent;
+    private NumassEvent nextEvent;
 
     public NMEventGeneratorWithPulser(RandomGenerator rnd, Meta meta) {
         super(rnd, meta);
@@ -26,14 +26,14 @@ public class NMEventGeneratorWithPulser extends NMEventGenerator {
     }
 
     @Override
-    public synchronized NMEvent get() {
+    public synchronized NumassEvent get() {
         //expected next event
         if (nextEvent == null) {
             nextEvent = nextEvent(prevEvent);
         }
         //if pulser event is first, then leave next event as is and return pulser event
         if (pulserEvent.getTime() < nextEvent.getTime()) {
-            NMEvent res = pulserEvent;
+            NumassEvent res = pulserEvent;
             pulserEvent = generatePulserEvent();
             return res;
         } else {
@@ -44,7 +44,7 @@ public class NMEventGeneratorWithPulser extends NMEventGenerator {
         }
     }
 
-    private NMEvent generatePulserEvent() {
+    private NumassEvent generatePulserEvent() {
         short channel = (short) pulserChanelDistribution.sample();
         double time;
         if (pulserEvent == null) {
@@ -52,6 +52,6 @@ public class NMEventGeneratorWithPulser extends NMEventGenerator {
         } else {
             time = pulserEvent.getTime() + pulserDist;
         }
-        return new NMEvent(channel, time);
+        return new NumassEvent(channel, time);
     }
 }

numass-main/src/main/java/inr/numass/utils/PileUpSimulator.java

@@ -5,10 +5,10 @@
  */
 package inr.numass.utils;
 
-import inr.numass.data.NMEvent;
 import inr.numass.data.NumassPoint;
 import inr.numass.data.PointBuilders;
 import inr.numass.data.RawNMPoint;
+import inr.numass.data.events.NumassEvent;
 import org.apache.commons.math3.random.RandomGenerator;
 
 import java.util.ArrayList;
@@ -25,14 +25,14 @@ public class PileUpSimulator {
     private final static double us = 1e-6;//microsecond
     private final double pointLength;
     private final RandomGenerator rnd;
-    private final List<NMEvent> generated = new ArrayList<>();
+    private final List<NumassEvent> generated = new ArrayList<>();
-    private final List<NMEvent> pileup = new ArrayList<>();
+    private final List<NumassEvent> pileup = new ArrayList<>();
-    private final List<NMEvent> registered = new ArrayList<>();
+    private final List<NumassEvent> registered = new ArrayList<>();
-    private Supplier<NMEvent> generator;
+    private Supplier<NumassEvent> generator;
     private double uSet = 0;
     private AtomicInteger doublePileup = new AtomicInteger(0);
 
-    public PileUpSimulator(double length, RandomGenerator rnd, Supplier<NMEvent> sup) {
+    public PileUpSimulator(double length, RandomGenerator rnd, Supplier<NumassEvent> sup) {
         this.rnd = rnd;
         generator = sup;//new NMEventGenerator(countRate, rnd);
         this.pointLength = length;
@@ -44,7 +44,7 @@ public class PileUpSimulator {
         this.pointLength = length;
     }
 
-    public PileUpSimulator withGenerator(Supplier<NMEvent> sup){
+    public PileUpSimulator withGenerator(Supplier<NumassEvent> sup){
         this.generator = sup;
         return this;
     }
@@ -111,7 +111,7 @@ public class PileUpSimulator {
     }
 
     public synchronized PileUpSimulator generate() {
-        NMEvent next;
+        NumassEvent next;
         double lastRegisteredTime = 0; // Time of DAQ closing
         //flag that shows that previous event was pileup
         boolean pileupFlag = false;
@@ -136,7 +136,7 @@ public class PileUpSimulator {
                     } else {
                         //pileup event
                         short newChannel = pileupChannel(delay, next.getChanel(), next.getChanel());
-                        NMEvent newEvent = new NMEvent(newChannel, next.getTime());
+                        NumassEvent newEvent = new NumassEvent(newChannel, next.getTime());
                         //replace already registered event by event with new channel
                         registered.remove(registered.size() - 1);
                         registered.add(newEvent);