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Multiple fixes to different moules

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This commit is contained in:
Alexander Nozik 2017-11-13 16:56:34 +03:00
parent 94d538d858
commit 1b76b42d55
30 changed files with 210 additions and 142 deletions
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2
numass-control/build.gradle
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@ -26,8 +26,6 @@ dependencies {
compile "hep.dataforge:plots-jfc" // project(':dataforge-plots:plots-jfc')
compile "hep.dataforge:dataforge-control" //project(':dataforge-control')
compile "hep.dataforge:dataforge-gui"
compile "org.jetbrains.kotlin:kotlin-stdlib-jre8:$kotlin_version"
}
task installAll(type: Copy) {

3
numass-control/control-room/build.gradle
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@ -10,7 +10,7 @@ if (!hasProperty('mainClass')) {
mainClassName = mainClass
version = "0.2.0"
version = "0.3.0"
description = "The control room application for numass slow control"
@ -29,7 +29,6 @@ dependencies {
devices project(':numass-control:cryotemp')
devices project(':numass-control:msp')
devices project(':numass-control:vac')
compile "org.jetbrains.kotlin:kotlin-stdlib-jre8:$kotlin_version"
}
shadowJar{

221
numass-control/control-room/src/main/kotlin/inr/numass/control/BoardController.kt
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@ -3,110 +3,185 @@ package inr.numass.control
import hep.dataforge.context.Context
import hep.dataforge.context.Global
import hep.dataforge.control.DeviceManager
import hep.dataforge.control.connections.Roles
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.meta.Meta
import hep.dataforge.server.ServerManager
import hep.dataforge.storage.api.Storage
import hep.dataforge.storage.commons.StorageFactory
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.storage.commons.StorageManager
import inr.numass.client.ClientUtils
import inr.numass.server.NumassStorageServerObject
import javafx.application.Application
import javafx.application.Platform
import javafx.beans.binding.ListBinding
import javafx.beans.property.SimpleObjectProperty
import javafx.collections.FXCollections
import javafx.collections.ObservableList
import tornadofx.*
import kotlin.streams.toList
/**
* Created by darksnake on 12-May-17.
*/
class BoardController() : Controller(), AutoCloseable {
val devices: ObservableList<DeviceDisplay<*>> = FXCollections.observableArrayList<DeviceDisplay<*>>();
val contextProperty = SimpleObjectProperty<Context>(Global.instance())
var context: Context by contextProperty
private set
val storageProperty = SimpleObjectProperty<Storage>()
var storage: Storage? by storageProperty
private set
val serverManagerProperty = SimpleObjectProperty<ServerManager>()
var serverManager: ServerManager? by serverManagerProperty
private set
fun load(app: Application) {
runAsync {
getConfig(app).ifPresent {
val context = Context.build("NUMASS", Global.instance(), it)
load(context, it)
}
}
val metaProperty = SimpleObjectProperty<Meta>(Meta.empty())
var meta: Meta by metaProperty
val storageManagerProperty = nonNullObjectBinding(contextProperty) {
context.pluginManager.getOrLoad(StorageManager::class.java)
}
private fun load(context: Context, meta: Meta) {
this.context = context;
devices.clear();
meta.getMetaList("device").forEach {
try {
Platform.runLater { devices.add(buildDeviceView(context, it)) };
} catch (ex: Exception) {
context.logger.error("Can't build device view", ex);
}
}
if (meta.hasMeta("storage")) {
val st = buildStorage(context, meta);
val storageConnection = StorageConnection(storage);
devices.forEach {
if (it.device.acceptsRole(Roles.STORAGE_ROLE)) {
it.device.connect(storageConnection, Roles.STORAGE_ROLE);
}
}
Platform.runLater {
storage = st
meta.optMeta("server").ifPresent { serverMeta ->
val sm = context.pluginManager().getOrLoad(ServerManager::class.java);
sm.configure(serverMeta)
sm.bind(NumassStorageServerObject(serverManager, storage, "numass-storage"));
serverManager = sm
}
}
}
}
private fun buildDeviceView(context: Context, deviceMeta: Meta): DeviceDisplay<*> {
context.logger.info("Building device with meta: {}", deviceMeta)
val device = context.loadFeature("devices", DeviceManager::class.java).buildDevice(deviceMeta)
device.init();
return device.getDisplay();
}
private fun buildStorage(context: Context, meta: Meta): Storage {
val storageProperty = nonNullObjectBinding(storageManagerProperty , metaProperty) {
val storageMeta = meta.getMeta("storage").builder
.putValue("readOnly", false)
.putValue("monitor", true)
context.logger.info("Creating storage for server with meta {}", storageMeta)
var storage = StorageFactory.buildStorage(context, storageMeta);
val rootStorage = value.buildStorage(storageMeta);
val numassRun = ClientUtils.getRunName(meta)
if (!numassRun.isEmpty()) {
context.logger.info("Run information found. Selecting run {}", numassRun)
storage = storage.buildShelf(numassRun, Meta.empty());
rootStorage.buildShelf(numassRun, Meta.empty());
} else {
rootStorage
}
}.apply {
onChange {
val connection = StorageConnection(value)
devices.map { it.device }.forEach { device ->
device.forEachConnection(StorageConnection::class.java) { device.disconnect(it) }//removing all ald storage connections
device.connect(connection)
}
}
}
val serverManagerProperty = objectBinding(contextProperty) {
context.optFeature(ServerManager::class.java).orElse(null)
}
val deviceManagerProperty = objectBinding(contextProperty) {
context.optFeature(DeviceManager::class.java).orElse(null)
}
val devices: ObservableList<DeviceDisplay<*>> = object : ListBinding<DeviceDisplay<*>>() {
init {
bind(deviceManagerProperty)
}
override fun computeValue(): ObservableList<DeviceDisplay<*>> {
val manager = deviceManagerProperty.value
return if (manager == null) {
FXCollections.emptyObservableList();
} else {
manager.deviceNames()
.filter { it.length == 1 } // select top level devices
.map { manager.optDevice(it) }
.filter { it.isPresent }
.map { it.get().getDisplay() }
.toList().observable()
}
}
}
fun configure(meta: Meta) {
val context = Context.build("NUMASS", Global.instance(), meta.getMeta("context", meta));
}
fun load(app: App) {
runAsync {
getConfig(app).ifPresent {
configure(it)
}
}
return storage;
}
override fun close() {
devices.forEach {
it.close()
}
context.close();
context.close()
}
// val devices: ObservableList<DeviceDisplay<*>> = FXCollections.observableArrayList<DeviceDisplay<*>>();
//
// val contextProperty = SimpleObjectProperty<Context>(Global.instance())
// var context: Context by contextProperty
// private set
//
// val storageProperty = SimpleObjectProperty<Storage>()
// var storage: Storage? by storageProperty
// private set
//
// val serverManagerProperty = SimpleObjectProperty<ServerManager>()
// var serverManager: ServerManager? by serverManagerProperty
// private set
//
// fun load(app: Application) {
// runAsync {
// getConfig(app).ifPresent {
// val context = Context.build("NUMASS", Global.instance(), it)
// load(context, it)
// }
// }
//
// }
//
// private fun load(context: Context, meta: Meta) {
// this.context = context;
// devices.clear();
// meta.getMetaList("device").forEach {
// try {
// Platform.runLater { devices.add(buildDeviceView(context, it)) };
// } catch (ex: Exception) {
// context.logger.error("Can't build device view", ex);
// }
// }
//
// if (meta.hasMeta("storage")) {
// val st = buildStorage(context, meta);
// val storageConnection = StorageConnection(storage);
// devices.forEach {
// if (it.device.acceptsRole(Roles.STORAGE_ROLE)) {
// it.device.connect(storageConnection, Roles.STORAGE_ROLE);
// }
// }
// Platform.runLater {
// storage = st
// meta.optMeta("server").ifPresent { serverMeta ->
// val sm = context.getPluginManager().getOrLoad(ServerManager::class.java);
// sm.configure(serverMeta)
//
// sm.bind(NumassStorageServerObject(serverManager, storage, "numass-storage"));
// serverManager = sm
// }
// }
// }
// }
//
// private fun buildDeviceView(context: Context, deviceMeta: Meta): DeviceDisplay<*> {
// context.logger.info("Building device with meta: {}", deviceMeta)
// val device = context.loadFeature("devices", DeviceManager::class.java).buildDevice(deviceMeta)
// device.init();
// return device.getDisplay();
// }
//
// private fun buildStorage(context: Context, meta: Meta): Storage {
// val storageMeta = meta.getMeta("storage").builder
// .putValue("readOnly", false)
// .putValue("monitor", true)
//
// context.logger.info("Creating storage for server with meta {}", storageMeta)
// var storage = StorageFactory.buildStorage(context, storageMeta);
//
// val numassRun = ClientUtils.getRunName(meta)
// if (!numassRun.isEmpty()) {
// context.logger.info("Run information found. Selecting run {}", numassRun)
// storage = storage.buildShelf(numassRun, Meta.empty());
// }
// return storage;
// }
//
// override fun close() {
// devices.forEach {
// it.close()
// }
// context.close();
// }
}

23
numass-control/control-room/src/main/kotlin/inr/numass/control/BoardView.kt
View File

@ -1,9 +1,9 @@
package inr.numass.control
import hep.dataforge.fx.dfIcon
import hep.dataforge.storage.filestorage.FileStorage
import javafx.geometry.Orientation
import javafx.geometry.Pos
import javafx.scene.control.Hyperlink
import javafx.scene.image.ImageView
import javafx.scene.layout.Priority
import tornadofx.*
@ -25,19 +25,16 @@ class BoardView : View("Numass control board", ImageView(dfIcon)) {
hbox {
alignment = Pos.CENTER_LEFT
prefHeight = 40.0
var serverLabel: Hyperlink by singleAssign();
togglebutton("Start") {
isSelected = false
disableProperty().bind(controller.serverManagerProperty.isNull)
disableProperty().bind(controller.serverManagerProperty.booleanBinding { it == null })
action {
if (isSelected) {
text = "Stop"
controller.serverManager?.startServer()
serverLabel.text = controller.serverManager?.link;
controller.serverManagerProperty.value?.startServer()
} else {
text = "Start"
controller.serverManager?.stopServer()
serverLabel.text = ""
controller.serverManagerProperty.value?.stopServer()
}
}
}
@ -45,13 +42,16 @@ class BoardView : View("Numass control board", ImageView(dfIcon)) {
paddingHorizontal = 5
}
indicator {
bind(controller.serverManagerProperty.select { it.isStarted })
bind(controller.serverManagerProperty.select { it?.isStartedProperty ?: false.toProperty() })
}
separator(Orientation.VERTICAL)
text("Address: ")
serverLabel = hyperlink {
hyperlink {
textProperty().bind(controller.serverManagerProperty.stringBinding {
it?.link ?: ""
})
action {
hostServices.showDocument(controller.serverManager?.link);
hostServices.showDocument(controller.serverManagerProperty.value?.link);
}
}
}
@ -61,8 +61,7 @@ class BoardView : View("Numass control board", ImageView(dfIcon)) {
hbox {
alignment = Pos.CENTER_LEFT
prefHeight = 40.0
label(stringBinding(controller.storageProperty) {
val storage = controller.storage
label(controller.storageProperty.stringBinding { storage ->
if (storage == null) {
"Storage not initialized"
} else {

2
numass-control/cryotemp/src/main/kotlin/inr/numass/control/cryotemp/PKT8Device.kt
View File

@ -20,7 +20,6 @@ import hep.dataforge.control.RoleDef
import hep.dataforge.control.RoleDefs
import hep.dataforge.control.collectors.RegularPointCollector
import hep.dataforge.control.connections.Roles
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.control.devices.Device
import hep.dataforge.control.devices.PortSensor
import hep.dataforge.control.devices.StateDef
@ -34,6 +33,7 @@ import hep.dataforge.exceptions.StorageException
import hep.dataforge.meta.Meta
import hep.dataforge.storage.api.TableLoader
import hep.dataforge.storage.commons.LoaderFactory
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.tables.TableFormat
import hep.dataforge.tables.TableFormatBuilder
import hep.dataforge.utils.DateTimeUtils

2
numass-control/msp/src/main/kotlin/inr/numass/control/msp/MspDevice.kt
View File

@ -21,7 +21,6 @@ import hep.dataforge.control.RoleDef
import hep.dataforge.control.RoleDefs
import hep.dataforge.control.collectors.RegularPointCollector
import hep.dataforge.control.connections.Roles
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.control.devices.*
import hep.dataforge.control.measurements.AbstractMeasurement
import hep.dataforge.control.ports.PortHandler
@ -35,6 +34,7 @@ import hep.dataforge.exceptions.PortException
import hep.dataforge.meta.Meta
import hep.dataforge.storage.api.TableLoader
import hep.dataforge.storage.commons.LoaderFactory
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.tables.TableFormatBuilder
import hep.dataforge.utils.DateTimeUtils
import hep.dataforge.values.Value

2
numass-control/src/main/kotlin/inr/numass/control/NumassControlApplication.kt
View File

@ -16,7 +16,7 @@ import java.util.function.Predicate
/**
* Created by darksnake on 14-May-17.
*/
abstract class NumassControlApplication<D : Device> : App() {
abstract class NumassControlApplication<in D : Device> : App() {
private var device: D by singleAssign()
override fun start(stage: Stage) {

10
numass-control/src/main/kotlin/inr/numass/control/NumassControlUtils.kt
View File

@ -3,17 +3,17 @@ package inr.numass.control
import hep.dataforge.context.Context
import hep.dataforge.context.Global
import hep.dataforge.control.connections.Roles
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.control.devices.Device
import hep.dataforge.exceptions.StorageException
import hep.dataforge.fx.dfIcon
import hep.dataforge.io.MetaFileReader
import hep.dataforge.io.XMLMetaReader
import hep.dataforge.meta.Meta
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.storage.commons.StorageFactory
import hep.dataforge.storage.commons.StorageManager
import inr.numass.client.ClientUtils
import javafx.application.Application
import javafx.scene.image.Image
import javafx.stage.Stage
import org.slf4j.LoggerFactory
import java.io.IOException
@ -27,8 +27,8 @@ import java.util.function.Predicate
* Created by darksnake on 08-May-17.
*/
val DEFAULT_CONFIG_LOCATION = "./numass-control.xml"
val STORING_STATE = "storing"
val dfIcon: Image = Image(Global::class.java.getResourceAsStream("/img/df.png"))
//val STORING_STATE = "storing"
//val dfIcon: Image = Image(Global::class.java.getResourceAsStream("/img/df.png"))
/**
* Create a single or multiple storage connections for a device
@ -108,7 +108,7 @@ fun findDeviceMeta(config: Meta, criterion: Predicate<Meta>): Optional<Meta> {
fun setupContext(meta: Meta): Context {
val ctx = Global.getContext("NUMASS-CONTROL")
ctx.pluginManager().getOrLoad(StorageManager::class.java)
ctx.getPluginManager().getOrLoad(StorageManager::class.java)
return ctx
}

2
numass-control/src/main/kotlin/inr/numass/control/StorageHelper.kt
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@ -1,8 +1,8 @@
package inr.numass.control
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.control.devices.AbstractDevice
import hep.dataforge.storage.api.TableLoader
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.values.Values
import java.util.*

2
numass-control/vac/src/main/kotlin/inr/numass/control/readvac/VacCollectorDevice.kt
View File

@ -10,7 +10,6 @@ import hep.dataforge.control.Connection
import hep.dataforge.control.RoleDef
import hep.dataforge.control.collectors.RegularPointCollector
import hep.dataforge.control.connections.Roles
import hep.dataforge.control.connections.StorageConnection
import hep.dataforge.control.devices.Device
import hep.dataforge.control.devices.DeviceHub
import hep.dataforge.control.devices.PortSensor.CONNECTED_STATE
@ -24,6 +23,7 @@ import hep.dataforge.meta.Meta
import hep.dataforge.names.Name
import hep.dataforge.storage.api.TableLoader
import hep.dataforge.storage.commons.LoaderFactory
import hep.dataforge.storage.commons.StorageConnection
import hep.dataforge.tables.TableFormatBuilder
import hep.dataforge.tables.ValueMap
import hep.dataforge.utils.DateTimeUtils

4
numass-main/src/main/groovy/inr/numass/scripts/ShowTransmission.groovy
View File

@ -13,8 +13,8 @@ import static hep.dataforge.grind.Grind.buildMeta
import static hep.dataforge.grind.Grind.morph
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
GrindShell shell = new GrindShell(ctx)

4
numass-main/src/main/groovy/inr/numass/scripts/temp/FSSEffect.groovy
View File

@ -13,8 +13,8 @@ import inr.numass.models.FSS
import inr.numass.models.sterile.NumassBeta
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
new GrindShell(ctx).eval {

4
numass-main/src/main/groovy/inr/numass/scripts/times/AnalyzePoint.groovy
View File

@ -22,8 +22,8 @@ import inr.numass.data.storage.NumassStorageFactory
Context ctx = Global.instance()
ctx.pluginManager().load(PlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(PlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
new GrindShell(ctx).eval {
File rootDir = new File("D:\\Work\\Numass\\data\\2017_05\\Fill_3")

4
numass-main/src/main/groovy/inr/numass/scripts/times/Histogram.groovy
View File

@ -13,8 +13,8 @@ import inr.numass.data.storage.NumassStorage
import inr.numass.data.storage.NumassStorageFactory
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin)
new GrindShell(ctx).eval {
File rootDir = new File("D:\\Work\\Numass\\data\\2017_05\\Fill_2")

4
numass-main/src/main/groovy/inr/numass/scripts/times/MultiPointHistogram.groovy
View File

@ -20,8 +20,8 @@ import inr.numass.data.storage.NumassStorageFactory
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
new GrindShell(ctx).eval {
PlotHelper plot = plots

4
numass-main/src/main/groovy/inr/numass/scripts/times/TestAnalyzer.groovy
View File

@ -19,8 +19,8 @@ import java.time.Instant
Context ctx = Global.instance()
ctx.pluginManager().load(PlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(PlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
new GrindShell(ctx).eval {

4
numass-main/src/main/groovy/inr/numass/scripts/times/TestProto.groovy
View File

@ -14,8 +14,8 @@ import inr.numass.data.storage.ProtoNumassPoint
import java.nio.file.Paths
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
new GrindShell(ctx).eval {
PlotHelper plot = plots

6
numass-main/src/main/groovy/inr/numass/scripts/underflow/ResponseFunction.groovy
View File

@ -15,9 +15,9 @@ import inr.numass.data.NumassDataUtils
import static hep.dataforge.grind.Grind.buildMeta
Context ctx = Global.instance()
ctx.pluginManager().load(FXPlotManager)
ctx.pluginManager().load(NumassPlugin.class)
ctx.pluginManager().load(CachePlugin.class)
ctx.getPluginManager().load(FXPlotManager)
ctx.getPluginManager().load(NumassPlugin.class)
ctx.getPluginManager().load(CachePlugin.class)
Meta meta = buildMeta {
data(dir: "D:\\Work\\Numass\\data\\2017_05\\Fill_2", mask: "set_.{1,3}")

6
numass-main/src/main/groovy/inr/numass/scripts/underflow/Underflow.groovy
View File

@ -29,9 +29,9 @@ import static inr.numass.data.api.NumassAnalyzer.CHANNEL_KEY
import static inr.numass.data.api.NumassAnalyzer.COUNT_RATE_KEY
Context ctx = Global.instance()
ctx.pluginManager().load(PlotManager)
ctx.pluginManager().load(NumassPlugin)
ctx.pluginManager().load(CachePlugin)
ctx.getPluginManager().load(PlotManager)
ctx.getPluginManager().load(NumassPlugin)
ctx.getPluginManager().load(CachePlugin)
Meta meta = buildMeta {
data(dir: "D:\\Work\\Numass\\data\\2017_05\\Fill_2", mask: "set_.{1,3}")

3
numass-main/src/main/java/inr/numass/Main.java
View File

@ -22,7 +22,6 @@ import hep.dataforge.data.FileDataFactory;
import hep.dataforge.io.IOManager;
import hep.dataforge.io.MetaFileReader;
import hep.dataforge.meta.Meta;
import hep.dataforge.providers.Path;
import org.apache.commons.cli.*;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@ -89,7 +88,7 @@ public class Main {
return;
}
java.nio.file.Path configFile = context.io().getFile(cfgPath);
java.nio.file.Path configFile = context.getIo().getFile(cfgPath);
if (!Files.exists(configFile)) {
throw new FileNotFoundException("Configuration file not found");

2
numass-main/src/main/java/inr/numass/Numass.java
View File

@ -66,6 +66,6 @@ public class Numass {
builder.text("***End of actions list***", "red");
context.io().getMarkupRenderer().render(builder.build());
context.getIo().getMarkupRenderer().render(builder.build());
}
}

2
numass-main/src/main/java/inr/numass/actions/SubstractSpectrumAction.java
View File

@ -30,7 +30,7 @@ public class SubstractSpectrumAction extends OneToOneAction<Table, Table> {
protected Table execute(Context context, String name, Table input, Laminate inputMeta) {
try {
String referencePath = inputMeta. getString("file", "empty.dat");
Path referenceFile = context.io().getFile(referencePath);
Path referenceFile = context.getIo().getFile(referencePath);
Table referenceTable = new ColumnedDataReader(referenceFile).toTable();
ListTable.Builder builder = new ListTable.Builder(input.getFormat());
input.getRows().forEach(point -> {

4
numass-main/src/main/java/inr/numass/data/MonitorCorrector.java
View File

@ -18,8 +18,6 @@ package inr.numass.data;
import hep.dataforge.context.Global;
import java.io.BufferedReader;
import java.io.File;
import java.io.FileReader;
import java.io.IOException;
import java.nio.file.Files;
import java.nio.file.Path;
@ -41,7 +39,7 @@ public class MonitorCorrector {
private final List<MonitorPoint> list;
public MonitorCorrector(String path) throws ParseException, IOException {
this(Global.instance().io().getFile(path));
this(Global.instance().getIo().getFile(path));
}
public MonitorCorrector(Path monitorFile) throws ParseException, IOException {

2
numass-main/src/main/java/inr/numass/models/TransmissionInterpolator.java
View File

@ -40,7 +40,7 @@ public class TransmissionInterpolator implements UnivariateFunction {
public static TransmissionInterpolator fromFile(Context context, String path, String xName, String yName, int nSmooth, double w, double border) {
try {
Path dataFile = context.io().getFile(path);
Path dataFile = context.getIo().getFile(path);
ColumnedDataReader reader = new ColumnedDataReader(Files.newInputStream(dataFile));
return new TransmissionInterpolator(reader, xName, yName, nSmooth, w, border);
} catch (IOException ex) {

2
numass-main/src/main/java/inr/numass/models/sterile/SterileNeutrinoSpectrum.java
View File

@ -63,7 +63,7 @@ public class SterileNeutrinoSpectrum extends AbstractParametricFunction {
InputStream fssStream = configuration.optString("fssFile")
.map(fssFile -> {
try {
return context.io().optBinary(fssFile)
return context.getIo().optBinary(fssFile)
.orElseThrow(() -> new RuntimeException("Could not locate FSS file"))
.getStream();
} catch (IOException e) {

8
numass-main/src/main/java/inr/numass/utils/OldDataReader.java
View File

@ -38,7 +38,7 @@ public class OldDataReader {
public static Table readConfig(String path) throws IOException {
String[] list = {"X", "time", "ushift"};
ListTable.Builder res = new ListTable.Builder(list);
Path file = Global.instance().io().getFile(path);
Path file = Global.instance().getIo().getFile(path);
Scanner sc = new Scanner(file);
sc.nextLine();
@ -60,7 +60,7 @@ public class OldDataReader {
public static Table readData(String path, double Elow) {
SpectrumDataAdapter factory = new SpectrumDataAdapter();
ListTable.Builder res = new ListTable.Builder(factory.getFormat());
Path file = Global.instance().io().getFile(path);
Path file = Global.instance().getIo().getFile(path);
double x;
int count;
int time;
@ -112,7 +112,7 @@ public class OldDataReader {
public static Table readDataAsGun(String path, double Elow) {
SpectrumDataAdapter factory = new SpectrumDataAdapter();
ListTable.Builder res = new ListTable.Builder(factory.getFormat());
Path file = Global.instance().io().getFile(path);
Path file = Global.instance().getIo().getFile(path);
double x;
long count;
int time;
@ -145,7 +145,7 @@ public class OldDataReader {
public static Table readSpectrumData(String path) {
SpectrumDataAdapter factory = new SpectrumDataAdapter();
ListTable.Builder res = new ListTable.Builder(factory.getFormat());
Path file = Global.instance().io().getFile(path);
Path file = Global.instance().getIo().getFile(path);
double x;
double count;
double time;

2
numass-main/src/main/kotlin/inr/numass/NumassPlugin.kt
View File

@ -51,7 +51,7 @@ class NumassPlugin : BasicPlugin() {
override fun attach(context: Context) {
// StorageManager.buildFrom(context);
super.attach(context)
context.pluginManager().load(NumassIO())
context.getPluginManager().load(NumassIO())
loadModels(context.getFeature(ModelManager::class.java))
loadMath(MathPlugin.buildFrom(context))

10
numass-main/src/main/kotlin/inr/numass/tasks/NumassTasks.kt
View File

@ -84,14 +84,14 @@ val monitorTableTask = task("monitor") {
//add set markers
addSetMarkers(frame, data.values)
}
context.io().out("numass.monitor", name, "dfp").use {
context.getIo().out("numass.monitor", name, "dfp").use {
NumassUtils.writeEnvelope(it, PlotFrame.Wrapper().wrap(frame))
}
}
}
}
context.io().out("numass.monitor", name).use {
context.getIo().out("numass.monitor", name).use {
NumassUtils.write(it, meta, res)
}
@ -106,7 +106,7 @@ val analyzeTask = task("analyze") {
}
pipe<NumassSet, Table> { set ->
SmartAnalyzer().analyzeSet(set, meta).also { res ->
context.io().out("numass.analyze", name).use {
context.getIo().out("numass.analyze", name).use {
NumassUtils.write(it, meta, res)
}
}
@ -174,7 +174,7 @@ val subtractEmptyTask = task("dif") {
res.goal.onComplete { r, _ ->
if (r != null) {
context.io().out("numass.merge", input.name + "_subtract").use {
context.getIo().out("numass.merge", input.name + "_subtract").use {
NumassUtils.write(it, resMeta, r)
}
}
@ -227,7 +227,7 @@ val fitTask = task("fit") {
configure(meta.getMeta("fit"))
}
pipe<Table, FitResult> { data ->
context.io().out("numass.fit", name).use { out ->
context.getIo().out("numass.fit", name).use { out ->
val writer = PrintWriter(out)
writer.printf("%n*** META ***%n")
writer.println(meta.toString())

4
numass-server/src/main/java/inr/numass/server/ServerRunner.java
View File

@ -26,9 +26,9 @@ public class ServerRunner extends SimpleConfigurable implements AutoCloseable {
Context context = Global.getContext("NUMASS_SERVER");
public ServerRunner() throws IOException, ParseException {
// Global.instance().pluginManager().load(StorageManager.class);
// Global.instance().getPluginManager().load(StorageManager.class);
Path configFile = context.io().getFile(SERVER_CONFIG_PATH);
Path configFile = context.getIo().getFile(SERVER_CONFIG_PATH);
if (Files.exists(configFile)) {
context.getLogger().info("Trying to read server configuration from {}", SERVER_CONFIG_PATH);
configure(MetaFileReader.read(configFile));

4
numass-server/src/main/java/inr/numass/server/TestServer.java
View File

@ -29,9 +29,9 @@ public class TestServer {
public static void main(String[] args) throws Exception {
Context context = Global.getContext("NUMASS-SERVER");
StorageManager storageManager = context.pluginManager().load(StorageManager.class);
StorageManager storageManager = context.getPluginManager().load(StorageManager.class);
ServerManager serverManager = context.pluginManager().load(ServerManager.class);
ServerManager serverManager = context.getPluginManager().load(ServerManager.class);
File path = new File("/D:/temp/test");
context.getLogger().info("Starting test numass storage servlet in '{}'", path);