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Slicer for numass

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This commit is contained in:
Alexander Nozik 2019-02-04 16:55:24 +03:00
parent 1881c3419e
commit 12114ffab3
3 changed files with 101 additions and 26 deletions
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70
numass-main/src/main/kotlin/inr/numass/NumassPlugin.kt
View File

@ -41,11 +41,11 @@ import org.apache.commons.math3.util.FastMath
* @author Alexander Nozik
*/
@PluginDef(
group = "inr.numass",
name = "numass",
dependsOn = ["hep.dataforge:functions", "hep.dataforge:MINUIT", "hep.dataforge:actions"],
support = false,
info = "Numass data analysis tools"
group = "inr.numass",
name = "numass",
dependsOn = ["hep.dataforge:functions", "hep.dataforge:MINUIT", "hep.dataforge:actions"],
support = false,
info = "Numass data analysis tools"
)
class NumassPlugin : BasicPlugin() {
@ -58,20 +58,21 @@ class NumassPlugin : BasicPlugin() {
}
private val tasks = listOf(
NumassFitScanSummaryTask,
NumassFitSummaryTask,
selectTask,
analyzeTask,
mergeTask,
mergeEmptyTask,
monitorTableTask,
subtractEmptyTask,
transformTask,
filterTask,
fitTask,
plotFitTask,
histogramTask,
fitScanTask
NumassFitScanSummaryTask,
NumassFitSummaryTask,
selectTask,
analyzeTask,
mergeTask,
mergeEmptyTask,
monitorTableTask,
subtractEmptyTask,
transformTask,
filterTask,
fitTask,
plotFitTask,
histogramTask,
fitScanTask,
sliceTask
)
@Provides(Task.TASK_TARGET)
@ -109,7 +110,10 @@ class NumassPlugin : BasicPlugin() {
BivariateFunction { E: Double, U: Double ->
val D = E - U
val factor = 7.33 - E / 1000.0 / 3.0
return@BivariateFunction 1.0 - (3.05346E-7 * D - 5.45738E-10 * Math.pow(D, 2.0) - 6.36105E-14 * Math.pow(D, 3.0)) * factor
return@BivariateFunction 1.0 - (3.05346E-7 * D - 5.45738E-10 * Math.pow(
D,
2.0
) - 6.36105E-14 * Math.pow(D, 3.0)) * factor
}
}
}
@ -263,11 +267,19 @@ class NumassPlugin : BasicPlugin() {
val transmissionFile = an.getString("transFile")
return TransmissionInterpolator
.fromFile(context, transmissionFile, transXName, transYName, nSmooth, w, stitchBorder)
.fromFile(context, transmissionFile, transXName, transYName, nSmooth, w, stitchBorder)
} else if (an.hasMeta("transBuildAction")) {
val transBuild = an.getMeta("transBuildAction")
try {
return TransmissionInterpolator.fromAction(context, transBuild, transXName, transYName, nSmooth, w, stitchBorder)
return TransmissionInterpolator.fromAction(
context,
transBuild,
transXName,
transYName,
nSmooth,
w,
stitchBorder
)
} catch (ex: InterruptedException) {
throw RuntimeException("Transmission builder failed")
}
@ -281,7 +293,11 @@ class NumassPlugin : BasicPlugin() {
return if (an.hasMeta(ValuesAdapter.ADAPTER_KEY)) {
Adapters.buildAdapter(an.getMeta(ValuesAdapter.ADAPTER_KEY))
} else {
Adapters.buildXYAdapter(NumassPoint.HV_KEY, NumassAnalyzer.COUNT_RATE_KEY, NumassAnalyzer.COUNT_RATE_ERROR_KEY)
Adapters.buildXYAdapter(
NumassPoint.HV_KEY,
NumassAnalyzer.COUNT_RATE_KEY,
NumassAnalyzer.COUNT_RATE_ERROR_KEY
)
}
}
@ -303,7 +319,13 @@ class NumassPlugin : BasicPlugin() {
* @return
*/
@JvmOverloads
fun displayChart(title: String, context: Context = Global, width: Double = 800.0, height: Double = 600.0, meta: Meta = Meta.empty()): JFreeChartFrame {
fun displayChart(
title: String,
context: Context = Global,
width: Double = 800.0,
height: Double = 600.0,
meta: Meta = Meta.empty()
): JFreeChartFrame {
val frame = JFreeChartFrame()
frame.configure(meta)
frame.configureValue("title", title)

2
numass-main/src/main/kotlin/inr/numass/scripts/timeanalysis/AnalyzeDantePoint.kt
View File

@ -51,7 +51,7 @@ fun main(args: Array<String>) {
hvs.forEach { hv ->
val points = loader.points.filter {
it.voltage == hv
}.map { it.channels[0]!! }.toList()
}.toList()
if (!points.isEmpty()) {
putStatic(
"point_${hv.toInt()}",

55
numass-main/src/main/kotlin/inr/numass/tasks/NumassTasks.kt
View File

@ -35,6 +35,7 @@ import inr.numass.data.analyzers.NumassAnalyzer
import inr.numass.data.analyzers.NumassAnalyzer.Companion.CHANNEL_KEY
import inr.numass.data.analyzers.NumassAnalyzer.Companion.COUNT_KEY
import inr.numass.data.analyzers.SmartAnalyzer
import inr.numass.data.analyzers.countInWindow
import inr.numass.data.api.MetaBlock
import inr.numass.data.api.NumassPoint
import inr.numass.data.api.NumassSet
@ -317,7 +318,7 @@ val histogramTask = task("histogram") {
.filter { points == null || points.contains(it.voltage) }
.groupBy { it.voltage }
.mapValues {
analyzer.getAmplitudeSpectrum(MetaBlock(it.value))
analyzer.getAmplitudeSpectrum(MetaBlock(it.value), meta.getMetaOrEmpty("analyzer"))
}
.forEach { u, spectrum ->
log.report("Aggregating data from U = $u")
@ -383,6 +384,58 @@ val histogramTask = task("histogram") {
}
}
val sliceTask = task("slice") {
model { meta ->
dependsOn(selectTask, meta)
configure(meta.getMetaOrEmpty("slice"))
configure {
meta.useMeta("analyzer") { putNode(it) }
setValue("@target", meta.getString("@target", meta.name))
}
}
join<NumassSet, Table> { data ->
val analyzer = SmartAnalyzer()
val slices = HashMap<String, IntRange>()
val formatBuilder = TableFormatBuilder()
formatBuilder.addColumn("set",ValueType.STRING)
formatBuilder.addColumn("time",ValueType.TIME)
meta.getMetaList("range").forEach {
val range = IntRange(it.getInt("from"), it.getInt("to"))
val name = it.getString("name", range.toString())
slices[name] = range
formatBuilder.addColumn(name, ValueType.NUMBER)
}
val table = buildTable(formatBuilder.build()) {
data.forEach { setName, set ->
val point = set.find {
it.index == meta.getInt("index", -1) ||
it.voltage == meta.getDouble("voltage", -1.0)
}
if (point != null) {
val amplitudeSpectrum = analyzer.getAmplitudeSpectrum(point, meta.getMetaOrEmpty("analyzer"))
val map = HashMap<String, Any>()
map["set"] = setName
map["time"] = point.startTime
slices.mapValuesTo(map) { (_, range) ->
amplitudeSpectrum.countInWindow(
range.start.toShort(),
range.endInclusive.toShort()
)
}
row(map)
}
}
}
// send raw table to the output
context.output.render(table, stage = "numass.table", name = name, meta = meta)
return@join table
}
}
val fitScanTask = task("fitscan") {
model { meta ->
dependsOn(filterTask, meta)