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Tables optimizzed and partially moved to kotlin

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This commit is contained in:
Alexander Nozik 2018-04-24 09:42:44 +03:00
parent 97f534646d
commit 09a651b556
13 changed files with 32 additions and 41 deletions
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3
numass-control/dante/src/main/kotlin/inr/numass/control/dante/DanteClient.kt
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@ -180,6 +180,9 @@ class DanteClient(val ip: String, chainLength: Int) : AutoCloseable {
val board = header[1]
val packet = header[2]
val length = (header[3].positive * 0x100 + header[4].positive * 0x010 + header[5].positive) * 4
if (length > 8) {
logger.trace("Received long message with header $header")
}
val payload = ByteArray(length)
DataInputStream(stream).readFully(payload)
handle(DanteMessage(command, board.positive, packet.positive, payload))

2
numass-core/src/main/kotlin/inr/numass/data/NumassDataUtils.kt
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@ -23,7 +23,7 @@ object NumassDataUtils {
override val points: Stream<out NumassPoint> by lazy {
val points = sets.stream().flatMap<NumassPoint> { it.points }
.collect(Collectors.groupingBy<NumassPoint, Double> { it.voltage })
points.entries.stream().map { entry -> SimpleNumassPoint(entry.key, entry.value) }
points.entries.stream().map { entry -> SimpleNumassPoint(entry.value, entry.key) }
}
override val meta: Meta by lazy {

2
numass-core/src/main/kotlin/inr/numass/data/analyzers/TimeAnalyzer.kt
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@ -83,7 +83,7 @@ class TimeAnalyzer @JvmOverloads constructor(private val processor: SignalProces
override fun analyzePoint(point: NumassPoint, config: Meta): Values {
//Average count rates, do not sum events
val res = point.blocks
val res = point.blocks.stream()
.map { it -> analyze(it, config) }
.reduce(null) { v1, v2 -> this.combineBlockResults(v1, v2) }

10
numass-core/src/main/kotlin/inr/numass/data/api/NumassPoint.kt
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@ -15,7 +15,7 @@ import java.util.stream.Stream
interface NumassPoint : Metoid, NumassBlock {
val blocks: Stream<NumassBlock>
val blocks: List<NumassBlock>
/**
* Get the voltage setting for the point
@ -38,7 +38,7 @@ interface NumassPoint : Metoid, NumassBlock {
* @return
*/
val firstBlock: NumassBlock
get() = blocks.findFirst().orElseThrow { RuntimeException("The point is empty") }
get() = blocks.firstOrNull() ?: throw RuntimeException("The point is empty")
/**
* Get the starting time from meta or from first block
@ -54,7 +54,7 @@ interface NumassPoint : Metoid, NumassBlock {
* @return
*/
override val length: Duration
get() = Duration.ofNanos(blocks.filter{it.channel == 0}.mapToLong { it -> it.length.toNanos() }.sum())
get() = Duration.ofNanos(blocks.stream().filter { it.channel == 0 }.mapToLong { it -> it.length.toNanos() }.sum())
/**
* Get all events it all blocks as a single sequence
@ -66,7 +66,7 @@ interface NumassPoint : Metoid, NumassBlock {
* @return
*/
override val events: Stream<NumassEvent>
get() = blocks.flatMap { it.events }
get() = blocks.stream().flatMap { it.events }
/**
* Get all frames in all blocks as a single sequence
@ -74,7 +74,7 @@ interface NumassPoint : Metoid, NumassBlock {
* @return
*/
override val frames: Stream<NumassFrame>
get() = blocks.flatMap { it.frames }
get() = blocks.stream().flatMap { it.frames }
companion object {

16
numass-core/src/main/kotlin/inr/numass/data/api/SimpleNumassPoint.kt
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@ -4,28 +4,18 @@ import hep.dataforge.meta.Meta
import hep.dataforge.meta.MetaBuilder
import hep.dataforge.meta.MetaHolder
import java.util.stream.Stream
/**
* A simple static implementation of NumassPoint
* Created by darksnake on 08.07.2017.
*/
class SimpleNumassPoint : MetaHolder, NumassPoint {
private val blockList: List<NumassBlock>
class SimpleNumassPoint(override val blocks: List<NumassBlock>, meta: Meta) : MetaHolder(meta), NumassPoint {
/**
* Input blocks must be sorted
* @param voltage
* @param blocks
*/
constructor(voltage: Double, blocks: Collection<NumassBlock>) : super(MetaBuilder("point").setValue(NumassPoint.HV_KEY, voltage)) {
this.blockList = blocks.sortedBy { it.startTime }
}
constructor(blocks: Collection<NumassBlock>, voltage: Double) :
this(blocks.sortedBy { it.startTime }, MetaBuilder("point").setValue(NumassPoint.HV_KEY, voltage))
constructor(meta: Meta, blocks: Collection<NumassBlock>) : super(meta) {
this.blockList = blocks.sortedBy { it.startTime }
}
override val blocks: Stream<NumassBlock>
get() = blockList.stream()
}

2
numass-core/src/main/kotlin/inr/numass/data/legacy/NumassDatFile.kt
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@ -168,7 +168,7 @@ constructor(override val name: String, private val path: Path, meta: Meta) : Num
.setValue("source", "legacy")
return SimpleNumassPoint(pointMeta, listOf<NumassBlock>(block))
return SimpleNumassPoint(listOf<NumassBlock>(block), pointMeta)
}
@Throws(IOException::class)

9
numass-core/src/main/kotlin/inr/numass/data/storage/ClassicNumassPoint.kt
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@ -28,14 +28,13 @@ class ClassicNumassPoint(private val envelope: Envelope) : NumassPoint {
override val index: Int = meta.getInt("external_meta.point_index", super.index)
override val blocks: Stream<NumassBlock>
get() {
override val blocks: List<NumassBlock> by lazy {
val length: Long = if (envelope.meta.hasValue("external_meta.acquisition_time")) {
envelope.meta.getValue("external_meta.acquisition_time").getLong()
envelope.meta.getValue("external_meta.acquisition_time").long
} else {
envelope.meta.getValue("acquisition_time").getLong()
envelope.meta.getValue("acquisition_time").long
}
return Stream.of(ClassicBlock(startTime, Duration.ofSeconds(length)))
listOf(ClassicBlock(startTime, Duration.ofSeconds(length)))
}
override val startTime: Instant

7
numass-core/src/main/kotlin/inr/numass/data/storage/ProtoNumassPoint.kt
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@ -28,12 +28,13 @@ class ProtoNumassPoint(override val meta: Meta, protoBuilder: () -> NumassProto.
val proto: NumassProto.Point by lazy(protoBuilder)
override val blocks: Stream<NumassBlock>
get() = proto.channelsList.stream()
override val blocks: List<NumassBlock> by lazy {
proto.channelsList.stream()
.flatMap { channel ->
channel.blocksList.stream()
.map { block -> ProtoBlock(channel.id.toInt(), block, this) }
.sorted(Comparator.comparing<ProtoBlock, Instant> { it.startTime })
}.toList()
}
override val voltage: Double = meta.getDouble("external_meta.HV1_value", super.voltage)
@ -42,7 +43,7 @@ class ProtoNumassPoint(override val meta: Meta, protoBuilder: () -> NumassProto.
override val startTime: Instant
get() = if (meta.hasValue("start_time")) {
meta.getValue("start_time").getTime()
meta.getValue("start_time").time
} else {
super.startTime
}

3
numass-main/src/main/groovy/inr/numass/scripts/times/AnalyzePoint.groovy
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@ -12,7 +12,6 @@ import inr.numass.actions.TimeAnalyzerAction
import inr.numass.data.NumassDataUtils
import inr.numass.data.api.NumassPoint
import inr.numass.data.api.NumassSet
import inr.numass.data.api.SimpleNumassPoint
import inr.numass.data.storage.NumassStorageFactory
/**
@ -49,7 +48,7 @@ new GrindShell(ctx).eval {
def builder = DataSet.builder(NumassPoint)
hvs.each { hv ->
builder.putStatic("point_${hv as int}", new SimpleNumassPoint(hv, all.points.filter {
builder.putStatic("point_${hv as int}", new inr.numass.data.api.SimpleNumassPoint.SimpleNumassPoint(hv, all.points.filter {
it.voltage == hv
}.collect()));
}

3
numass-main/src/main/groovy/inr/numass/scripts/times/TestAnalyzer.groovy
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@ -8,7 +8,6 @@ import hep.dataforge.meta.Meta
import inr.numass.NumassPlugin
import inr.numass.actions.TimeAnalyzerAction
import inr.numass.data.GeneratorKt
import inr.numass.data.api.SimpleNumassPoint
import org.apache.commons.math3.random.JDKRandomGenerator
import java.time.Instant
@ -36,7 +35,7 @@ new GrindShell(ctx).eval {
GeneratorKt.generateBlock(Instant.now().plusNanos(it * length), length, chain)
}
def point = new SimpleNumassPoint(10000, blocks)
def point = new inr.numass.data.api.SimpleNumassPoint.SimpleNumassPoint(10000, blocks)
def meta = Meta.empty()//Grind.buildMeta(plotHist: false)

2
numass-main/src/main/kotlin/inr/numass/scripts/Bunches.kt
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@ -26,7 +26,7 @@ fun main(args: Array<String>) {
generateBlock(Instant.now().plusNanos(it * length), length, generator)
}
val point = SimpleNumassPoint(10000.0, blocks)
val point = SimpleNumassPoint(blocks, 10000.0)
val meta = buildMeta {
"t0" to 1e7

4
numass-main/src/main/kotlin/inr/numass/scripts/timeanalysis/AnalyzePoint.kt
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@ -50,10 +50,10 @@ fun main(args: Array<String>) {
putStatic(
"point_${hv.toInt()}",
SimpleNumassPoint(
hv,
all.points.filter {
it.voltage == hv
}.collect(Collectors.toList())
}.collect(Collectors.toList()),
hv
)
)
}

2
numass-main/src/main/kotlin/inr/numass/subthreshold/Threshold.kt
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@ -51,7 +51,7 @@ object Threshold {
.flatMap { set -> set.points.toList() }
.groupBy { it.voltage }
.forEach { key, value ->
val point = SimpleNumassPoint(key, value)
val point = SimpleNumassPoint(value, key)
val name = key.toInt().toString()
dataBuilder.putStatic(name, point, buildMeta("meta", "voltage" to key));
}